HHsearch alignment for GI: 254780669 and conserved domain: pfam03102
>pfam03102 NeuB NeuB family. NeuB is the prokaryotic N-acetylneuraminic acid (Neu5Ac) synthase. It catalyses the direct formation of Neu5Ac (the most common sialic acid) by condensation of phosphoenolpyruvate (PEP) and N-acetylmannosamine (ManNAc). This reaction has only been observed in prokaryotes; eukaryotes synthesize the 9-phosphate form, Neu5Ac-9-P, and utilize ManNAc-6-P instead of ManNAc. Such eukaryotic enzymes are not present in this family. This family also contains SpsE spore coat polysaccharide biosynthesis proteins.
Probab=99.37 E-value=1.4e-10 Score=90.47 Aligned_cols=176 Identities=20% Similarity=0.326 Sum_probs=139.0
Q ss_pred HHHHHHHHHHHHCCEEEEECCCHHHHHHHHHH-CCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 88899988665287688522889999876502-15788225762899999998505977998367778999999999999
Q gi|254780669|r 103 GREIFRDLKKKYGFPILTDVHTEQQCEAIADS-VDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKL 181 (301)
Q Consensus 103 gL~il~e~k~~~glpv~TeV~~~~~~e~~~~~-vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki 181 (301)
T Consensus 57 ~~~~l~~~~kk~gi~f~~t~fd~~s~~~l~~l~~~~~KIaS~d~~n~~Li~~i~k~~kpiiiSTG-~s~~~eI~~~i~~~ 135 (240)
T pfam03102 57 WHKELFEYCKEKGIEFFSTPFDLESVDFLESLGVPAYKIASGEITNLPLLRYIAKTGKPVILSTG-MATLEEIEEAVETL 135 (240)
T ss_pred HHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECC-CCCHHHHHHHHHHH
T ss_conf 99999999998299689898989999988755888699898864658999999973996899579-88899999999999
Q ss_pred HHCCCCCEEEEECCCCCCCHHHCCCCCCCHHHHH-HCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEE
Q ss_conf 7258780899514654440100000001068885-187168711777421223453212638899999999997189889
Q gi|254780669|r 182 HAHGAKDVLFCERGTSFGYNTLVTDMRSIPIMTS-MGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGI 260 (301)
Q Consensus 182 ~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~lk~-~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGl 260 (301)
T Consensus 136 ~~~~~~~i~llhCvS~YPt~~~~~nL~~I~~lk~~f~~~iG~S-dHs~-----------g-----~~~~~~A~~~GA~-- 196 (240)
T pfam03102 136 REAGNEDITLLHCTSEYPAPFEDVNLRAIPTLKEAFGVPVGYS-DHTL-----------G-----IEAPIAAVALGAS-- 196 (240)
T ss_pred HHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEC-CCCC-----------C-----CHHHHHHHHCCCC--
T ss_conf 9634567768665888999746600999889998679968847-9889-----------7-----0777999982993--
Q ss_pred EEEECCCHHHCC--CCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 998369833479--78201868899999999999999988
Q gi|254780669|r 261 FLETHQDPDNAP--SDGPNMINIKDLPKLLSQLLAIDKII 298 (301)
Q Consensus 261 fiE~Hp~P~~Al--sD~~q~l~l~~l~~ll~~l~~i~~~v 298 (301)
T Consensus 197 iiEKH~tl~~~~~g~D~~~Sl~~~e~~~~v~~ir~~~~~l 236 (240)
T pfam03102 197 VIEKHFTLDRNLPGPDHKASLEPDELKELVKDIRNVEKAL 236 (240)
T ss_pred EEEEEEECCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHC
T ss_conf 9998765589999995564399999999999999999970