HHsearch alignment for GI: 254780669 and conserved domain: pfam03599
>pfam03599 CdhD CO dehydrogenase/acetyl-CoA synthase delta subunit.
Probab=96.89 E-value=0.048 Score=34.34 Aligned_cols=220 Identities=15% Similarity=0.119 Sum_probs=133.3
Q ss_pred EEECCCCCCEEECCCCC-----------EEEEECCCCCCCHHHHHHHHHHHHHHHHH--CCCCEEEECCCCCCCCCCCCC
Q ss_conf 68357877279769970-----------69995486349999999999999996553--399706601557688666322
Q gi|254780669|r 28 IHLGSGKNQVTFSNEQR-----------FVLIAGPCQIESHDHAFMIAEKLYAICQS--LNIGLVYKSSFDKANRSSLAG 94 (301)
Q Consensus 28 ~~ig~~~~~i~ig~~~~-----------l~iIAGPCsiES~e~~~~~A~~lk~~~~~--~~~~~ifK~sfdKanRtS~~s 94 (301)
T Consensus 2 V~iG~G~~~~~iGGE~VLyRHektf~npt~ia~dv~D~m~~~ei~a~~~~i~~v~~~~~~rVG~~l~~D~ia-v~~---- 76 (384)
T pfam03599 2 VVFGAGEKAVVIGGEEVLYRFELPFPNPTAITIDVFDNLSPELLKARRERIEDVMFDPKKRVGEKLTLDMIA-IRL---- 76 (384)
T ss_pred EEECCCCEEEEECCEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEE-EEE----
T ss_conf 586679636998783688746625679982699953887767799999998752132222221220233899-990----
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHCC---EEEECHHHCCCH-HHHHHHHHCCCEEEEECCCCCC
Q ss_conf 245671248889998866528768852288999987650215---788225762899-9999985059779983677789
Q gi|254780669|r 95 KRGVGLKKGREIFRDLKKKYGFPILTDVHTEQQCEAIADSVD---ILQIPALLCRQT-DLLTAAAQTGRVINVKKGQFLS 170 (301)
Q Consensus 95 frG~Gle~gL~il~e~k~~~glpv~TeV~~~~~~e~~~~~vD---ilQIgA~~~rqt-dLl~a~a~t~kpV~iKkgq~~s 170 (301)
T Consensus 77 ~s~dp-~~fa~~vk~V~~~~~~pliL~~~dp~vl~aale~~~~~rPLlyaAt~~-N~~~m~~lA~~~~~Pv~v~a~--~d 152 (384)
T pfam03599 77 ISTDP-KEFAKAVEKVLQAVDVPLVIGGSDPEVLKAALEVAEDERPLLYAATLD-NYKEIAELALEYKHPVLLWSI--ND 152 (384)
T ss_pred CCCCH-HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCEEEECCHH-HHHHHHHHHHHCCCCEEEECC--CC
T ss_conf 78999-999999999996469988998089999999999746589778548998-999999999974982899748--88
Q ss_pred HHHHHHHHHHHHHCCCCCEEEE------ECCCCCCCHHHCCCCCCCHHHH--HHCCCEEECHHHHHHHCCCCCCCCCCCH
Q ss_conf 9999999999972587808995------1465444010000000106888--5187168711777421223453212638
Q gi|254780669|r 171 PWEMHNILQKLHAHGAKDVLFC------ERGTSFGYNTLVTDMRSIPIMT--SMGVPVIFDASHSVQQPGIHGNCSGGER 242 (301)
Q Consensus 171 ~~e~~~a~eki~~~Gn~~i~lc------ERG~~fgy~~lvvD~~~i~~lk--~~~~PVi~D~SHs~q~p~~~~~~~gG~r 242 (301)
T Consensus 153 l~~l~~L~~~l~~~GikdlVLDPgT~~~g~~l~~t~~n~-~~IRRaAlkgdr~lgyPi~~~~~~a~-----------~~~ 220 (384)
T pfam03599 153 LNELKNLNRKLLKAGVKDIVLDPTTEALGYGIKDTIDNF-VRIRRAAIKGDKDLGFPISSGTTNAW-----------GAR 220 (384)
T ss_pred HHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHH-HHHHHHHHCCCCCCCCCEEECCCCCC-----------HHH
T ss_conf 999999999999769854898898866674689999999-99999986579778885551456664-----------036
Q ss_pred HHHHHHHHHHHHHCCCEEEEEECCCHHHCC
Q ss_conf 899999999997189889998369833479
Q gi|254780669|r 243 QYIVPLAKAAVAIGIAGIFLETHQDPDNAP 272 (301)
Q Consensus 243 ~~v~~la~aa~a~G~dGlfiE~Hp~P~~Al 272 (301)
T Consensus 221 ~~----~~~~~~~kYa~i~vl~~~~~~~~l 246 (384)
T pfam03599 221 ES----WMVNLMNRYADILILRGDDIWELM 246 (384)
T ss_pred HH----HHHHHHHHHCCEEEECCCCHHHHH
T ss_conf 88----999999875768997379888860