HHsearch results for GI: 254780669 and protein with PDBid: 1o60_A
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=100.00 E-value=0 Score=351.92 Aligned_cols=274 Identities=44% Similarity=0.779 Sum_probs=256.8
Q ss_pred CCCEEEECCCCCCEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 17706835787727976997069995486349999999999999996553399706601557688666322245671248
Q gi|254780669|r 24 TNAAIHLGSGKNQVTFSNEQRFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKG 103 (301)
Q Consensus 24 ~~~~~~ig~~~~~i~ig~~~~l~iIAGPCsiES~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gle~g 103 (301)
.++.++| +++.||+++|++||||||..+|.|+++++|+.+++.|++..+..+|||.+.+.+|++.++++..+.++.
T Consensus 2 ~~~~i~I----g~~~ig~~~p~~IIAG~nh~gs~~~a~~la~~a~~~gada~k~q~~k~~~~~~~~~~~~~~~~~~~~e~ 77 (292)
T 1o60_A 2 QNKIVKI----GNIDVANDKPFVLFGGMNVLESRDMAMQVCEAYVKVTEKLGVPYVFKASFDKANRSSIHSYRGPGMEEG 77 (292)
T ss_dssp CCCCEEE----TTEEECTTSCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHTCCEEEEEESCCTTCSSTTSCCCSCHHHH
T ss_pred CCCEEEE----CCEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHH
T ss_conf 9868997----999989999159996488657999999999999998876272619808866444555200025676999
Q ss_pred HHHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCEEEECHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 88999886652876885228899998765021578822576289999999850597799836777899999999999972
Q gi|254780669|r 104 REIFRDLKKKYGFPILTDVHTEQQCEAIADSVDILQIPALLCRQTDLLTAAAQTGRVINVKKGQFLSPWEMHNILQKLHA 183 (301)
Q Consensus 104 L~il~e~k~~~glpv~TeV~~~~~~e~~~~~vDilQIgA~~~rqtdLl~a~a~t~kpV~iKkgq~~s~~e~~~a~eki~~ 183 (301)
++++.+.++++++++.|+++++.+.+.+.+++|++|||++.++|++||++++++++|+++++|++.++++|..+++++.+
T Consensus 78 l~~~~~~~~~~~i~~~t~~~~~~~~~~l~~~v~~~kI~S~~~~n~~ll~~~a~~~kpvilstG~~~~~e~~~~~~~~i~~ 157 (292)
T 1o60_A 78 LKIFQELKDTFGVKIITDVHEIYQCQPVADVVDIIQLPAFLARQTDLVEAMAKTGAVINVKKPQFLSPSQMGNIVEKIEE 157 (292)
T ss_dssp HHHHHHHHHHHCCEEEEECCSGGGHHHHHTTCSEEEECGGGTTCHHHHHHHHHTTCEEEEECCTTSCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 99999988723974102312187999987247220341111216899999997099569824665789999999999985
Q ss_pred CCCCCEEEEECCCCCCCHHHCCCCCCCHHHHHH--CCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEE
Q ss_conf 587808995146544401000000010688851--871687117774212234532126388999999999971898899
Q gi|254780669|r 184 HGAKDVLFCERGTSFGYNTLVTDMRSIPIMTSM--GVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIF 261 (301)
Q Consensus 184 ~Gn~~i~lcERG~~fgy~~lvvD~~~i~~lk~~--~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlf 261 (301)
.||.++++|+|++.+++.+..++++.+..++.. ..|.+.|.+|..+.........++.+++.+++++||+++|++|+|
T Consensus 158 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aAva~Ga~g~i 237 (292)
T 1o60_A 158 CGNDKIILCDRGTNFGYDNLIVDMLGFSVMKKASKGSPVIFDVTHSLQCRDPFGAASSGRRAQVTELARSGLAVGIAGLF 237 (292)
T ss_dssp TTCCCEEEEECCEECSTTCEECCTTHHHHHHHHTTSCCEEEEHHHHCC------------CTTHHHHHHHHHHHCCSEEE
T ss_pred CCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEE
T ss_conf 39962036664244688753014088889998632344311234542123333333345432214789999980999799
Q ss_pred EEECCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 9836983347978201868899999999999999988519
Q gi|254780669|r 262 LETHQDPDNAPSDGPNMINIKDLPKLLSQLLAIDKIIKPL 301 (301)
Q Consensus 262 iE~Hp~P~~AlsD~~q~l~l~~l~~ll~~l~~i~~~vk~l 301 (301)
||.|++|++++||++++|+|++|+.|+++++.|++++|+.
T Consensus 238 IEkH~tldk~~~D~~~Sl~p~el~~lv~~ir~i~~~ik~~ 277 (292)
T 1o60_A 238 LEAHPNPNQAKCDGPSALPLSALEGFVSQMKAIDDLVKSF 277 (292)
T ss_dssp EEEESSGGGCSSCCTTCEEGGGHHHHHHHHHHHHHHHHHS
T ss_pred EEECCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9968880006886001469999999999999999998656