HHsearch results for GI: 254780669 and protein with PDBid: 1vhn_A
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=95.54 E-value=0.068 Score=31.91 Aligned_cols=111 Identities=14% Similarity=0.213 Sum_probs=65.7
Q ss_pred ECHHHCCCHHHHHHHH-----HCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCHHHH
Q ss_conf 2257628999999985-----05977998367778999999999999725878089951465444010000000106888
Q gi|254780669|r 140 IPALLCRQTDLLTAAA-----QTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIMT 214 (301)
Q Consensus 140 IgA~~~rqtdLl~a~a-----~t~kpV~iKkgq~~s~~e~~~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~lk 214 (301)
-||.++++.+++.++- .++.||-+|=-..-+.+++...+..+.+.|...+.+--|=-.-+|.. ..|...++.+|
T Consensus 103 ~Ga~Ll~~p~~~~~iv~~~~~~~~~pvsvK~RlG~d~~~~~~~~~~l~~~G~~~ltiH~Rt~~q~y~g-~~~w~~I~~~k 181 (318)
T 1vhn_A 103 AGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKNEVEEIYRILVEEGVDEVFIHTRTVVQSFTG-RAEWKALSVLE 181 (318)
T ss_dssp CGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESCSSSCCHHHHHHHHHHTTCCEEEEESSCTTTTTSS-CCCGGGGGGSC
T ss_pred CCCCHHHCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEEEHHCCCCC-CCHHHHHHHHH
T ss_conf 73135325378999975321115884211141276621467999999982864677630002206775-10167899987
Q ss_pred HHCCCEEECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEE--ECCCH
Q ss_conf 5187168711777421223453212638899999999997189889998--36983
Q gi|254780669|r 215 SMGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLE--THQDP 268 (301)
Q Consensus 215 ~~~~PVi~D~SHs~q~p~~~~~~~gG~r~~v~~la~aa~a~G~dGlfiE--~Hp~P 268 (301)
+ .+|||. +|+.. ...++..-+ -..|+||+|+= .--||
T Consensus 182 ~-~iPvi~-----------NGdI~-s~~da~~~l----~~tg~dGVMIGRgal~nP 220 (318)
T 1vhn_A 182 K-RIPTFV-----------SGDIF-TPEDAKRAL----EESGCDGLLVARGAIGRP 220 (318)
T ss_dssp C-SSCEEE-----------ESSCC-SHHHHHHHH----HHHCCSEEEESGGGTTCT
T ss_pred C-CCCCCC-----------CCCCC-CHHHHHHHH----HHHCCCEEEECHHHHHCC
T ss_conf 1-586101-----------58869-999999998----723899799717657197