HHsearch results for GI: 254780669 and protein with PDBid: 3noy_A
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=92.09 E-value=0.69 Score=25.28 Aligned_cols=191 Identities=16% Similarity=0.262 Sum_probs=110.5
Q ss_pred ECCCEEEECCCCCCEEECCCCCEEEEECCCCCCC--HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 3177068357877279769970699954863499--99999999999996553399706601557688666322245671
Q gi|254780669|r 23 HTNAAIHLGSGKNQVTFSNEQRFVLIAGPCQIES--HDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGL 100 (301)
Q Consensus 23 ~~~~~~~ig~~~~~i~ig~~~~l~iIAGPCsiES--~e~~~~~A~~lk~~~~~~~~~~ifK~sfdKanRtS~~sfrG~Gl 100 (301)
...+.+.+ +++.|||++|..+=+ -+.... -+..++-...|.+.|..+. |-.. +.
T Consensus 14 R~T~~V~V----G~v~IGG~aPv~VQS-Mt~t~t~D~eat~~qI~~L~~aG~EiV-------------RvaV-----p~- 69 (366)
T 3noy_A 14 RKTRQIRV----GNVKIGGDAPIVVQS-MTSTKTHDVEATLNQIKRLYEAGCEIV-------------RVAV-----PH- 69 (366)
T ss_dssp CCCCCEEE----TTEEESTTSCCEEEE-ECCSCTTCHHHHHHHHHHHHHTTCCEE-------------EEEC-----CS-
T ss_pred CCCEEEEE----CCEEECCCCCCEEEE-CCCCCCHHHHHHHHHHHHHHHCCCCEE-------------EECC-----CC-
T ss_conf 46537998----286247999501565-599975459999999999998599989-------------9844-----99-
Q ss_pred HHHHHHHHHHHHHHCCEEEEECCCHHHHHH--HHHHCCEEEECHHHCCCHH----HHHHHHHCCCEEEEE----------
Q ss_conf 248889998866528768852288999987--6502157882257628999----999985059779983----------
Q gi|254780669|r 101 KKGREIFRDLKKKYGFPILTDVHTEQQCEA--IADSVDILQIPALLCRQTD----LLTAAAQTGRVINVK---------- 164 (301)
Q Consensus 101 e~gL~il~e~k~~~glpv~TeV~~~~~~e~--~~~~vDilQIgA~~~rqtd----Ll~a~a~t~kpV~iK---------- 164 (301)
.+..+-|.+++++..+|++-|+|-..++.. +...+|-+.|---|.-..+ +++++.+.++|+-+=
T Consensus 70 ~~~a~al~~I~~~~~iPlvaDiHf~~~la~~a~~~g~~kiRINPGNig~~~~~~~vv~~ak~~~i~iRIGvN~GSL~~~~ 149 (366)
T 3noy_A 70 KEDVEALEEIVKKSPMPVIADIHFAPSYAFLSMEKGVHGIRINPGNIGKEEIVREIVEEAKRRGVAVRIGVNSGSLEKDL 149 (366)
T ss_dssp HHHHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHTTCSEEEECHHHHSCHHHHHHHHHHHHHHTCEEEEEEEGGGCCHHH
T ss_pred HHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCHHH
T ss_conf 99999699999718988540043353355677664220023574334722776899999997699736535657578999
Q ss_pred --CCCCCCHHHHH----HHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCHHH-HHHCCCEEECHHHHHHHCCCCCCC
Q ss_conf --67778999999----99999972587808995146544401000000010688-851871687117774212234532
Q gi|254780669|r 165 --KGQFLSPWEMH----NILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIM-TSMGVPVIFDASHSVQQPGIHGNC 237 (301)
Q Consensus 165 --kgq~~s~~e~~----~a~eki~~~Gn~~i~lcERG~~fgy~~lvvD~~~i~~l-k~~~~PVi~D~SHs~q~p~~~~~~ 237 (301)
|-...+++-|. ..++.+.+.|-.++++ |+-..+..+-+++--.+ +++.+|.-+-.|.+
T Consensus 150 l~~~~~~~~~amvesal~~i~~~e~~~f~~i~i-----S~KsS~v~~~i~ayrlla~~~dyPLHLGvTEA---------- 214 (366)
T 3noy_A 150 LEKYGYPSAEALAESALRWSEKFEKWGFTNYKV-----SIKGSDVLQNVRANLIFAERTDVPLHIGITEA---------- 214 (366)
T ss_dssp HHHHSSCCHHHHHHHHHHHHHHHHHTTCCCEEE-----EEECSSHHHHHHHHHHHHHHCCCCEEECCSSC----------
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEE-----EEEECCHHHHHHHHHHHHHCCCCCEEEEEEEC----------
T ss_conf 976246302346589999999998648876446-----78844199999999998642687627767603----------
Q ss_pred CCCCHHHHHHHHHHHHHHC
Q ss_conf 1263889999999999718
Q gi|254780669|r 238 SGGERQYIVPLAKAAVAIG 256 (301)
Q Consensus 238 ~gG~r~~v~~la~aa~a~G 256 (301)
|... ..+-++++++|
T Consensus 215 --G~~~--~g~IkSsigiG 229 (366)
T 3noy_A 215 --GMGT--KGIIKSSVGIG 229 (366)
T ss_dssp --CSHH--HHHHHHHHHHH
T ss_pred --CCCC--CCCCCCHHHHH
T ss_conf --6752--22125377799