RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddB 21,608 sequences; 5,994,473 total letters Searching..................................................done Query= gi|254780669|ref|YP_003065082.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Candidatus Liberibacter asiaticus str. psy62] (301 letters) >gnl|CDD|179961 PRK05198, PRK05198, 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional. Length = 264 Score = 474 bits (1223), Expect = e-134 Identities = 149/264 (56%), Positives = 193/264 (73%) Query: 35 NQVTFSNEQRFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAG 94 + N+ F LIAGPC IES D A IAE L I L I V+K+SFDKANRSS+ Sbjct: 1 GDIEVGNDLPFFLIAGPCVIESRDLALRIAEHLKEITDKLGIPYVFKASFDKANRSSIHS 60 Query: 95 KRGVGLKKGREIFRDLKKKYGFPILTDVHTEQQCEAIADSVDILQIPALLCRQTDLLTAA 154 RG GL++G +I +++K+ +G P+LTDVH +Q +A+ VD+LQIPA LCRQTDLL AA Sbjct: 61 FRGPGLEEGLKILQEVKETFGVPVLTDVHEPEQAAPVAEVVDVLQIPAFLCRQTDLLVAA 120 Query: 155 AQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIMT 214 A+TG+V+N+KKGQFL+PW+M N++ K+ G ++ CERGTSFGYN LV DMR +PIM Sbjct: 121 AKTGKVVNIKKGQFLAPWDMKNVVDKVREAGNDKIILCERGTSFGYNNLVVDMRGLPIMR 180 Query: 215 SMGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLETHQDPDNAPSD 274 G PVIFDA+HSVQ PG G SGG+R+++ LA+AAVA+G+AG+F+ETH DPDNA SD Sbjct: 181 ETGAPVIFDATHSVQLPGGQGGSSGGQREFVPVLARAAVAVGVAGLFIETHPDPDNALSD 240 Query: 275 GPNMINIKDLPKLLSQLLAIDKII 298 GPNM+ + L LL QL AID ++ Sbjct: 241 GPNMLPLDKLEPLLEQLKAIDDLV 264 >gnl|CDD|130429 TIGR01362, KDO8P_synth, 3-deoxy-8-phosphooctulonate synthase. In Gram-negative bacteria, this is the first step in the biosynthesis of 3-deoxy-D-manno-octulosonate, part of the oligosaccharide core of lipopolysaccharide. Length = 258 Score = 397 bits (1021), Expect = e-111 Identities = 156/257 (60%), Positives = 201/257 (78%) Query: 43 QRFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKK 102 ++F LIAGPC IES DHA +AEKL + L + ++KSSFDKANRSS+ RG GL++ Sbjct: 1 EKFFLIAGPCVIESEDHALRVAEKLKELTSKLGVPFIFKSSFDKANRSSIHSFRGPGLEE 60 Query: 103 GREIFRDLKKKYGFPILTDVHTEQQCEAIADSVDILQIPALLCRQTDLLTAAAQTGRVIN 162 G +I + +K+++G PILTDVH QCE +A+ VDI+QIPA LCRQTDLL AAA+TGR++N Sbjct: 61 GLKILQKVKEEFGVPILTDVHESSQCEPVAEVVDIIQIPAFLCRQTDLLVAAAKTGRIVN 120 Query: 163 VKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIMTSMGVPVIF 222 VKKGQFLSPW+M N+++K+ + G K++L CERGTSFGYN LV DMRS+PIM +G PVIF Sbjct: 121 VKKGQFLSPWDMKNVVEKVLSTGNKNILLCERGTSFGYNNLVVDMRSLPIMRELGCPVIF 180 Query: 223 DASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLETHQDPDNAPSDGPNMINIK 282 DA+HSVQQPG G SGG R+++ LA+AAVA+GI G+F+ETH DP NA SDGPNM+ + Sbjct: 181 DATHSVQQPGGLGGASGGLREFVPTLARAAVAVGIDGLFMETHPDPKNAKSDGPNMLPLS 240 Query: 283 DLPKLLSQLLAIDKIIK 299 +L LL +LLAID + K Sbjct: 241 ELEGLLEKLLAIDALTK 257 >gnl|CDD|171512 PRK12457, PRK12457, 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional. Length = 281 Score = 288 bits (738), Expect = 2e-78 Identities = 117/265 (44%), Positives = 171/265 (64%), Gaps = 2/265 (0%) Query: 37 VTFSNEQRFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKR 96 +T N+ FVL G +ES D + + + + L I V+K+SFDKANRSS+ R Sbjct: 9 ITVGNDLPFVLFGGINVLESLDFTLDVCGEYVEVTRKLGIPFVFKASFDKANRSSIHSYR 68 Query: 97 GVGLKKGREIFRDLKKKYGFPILTDVHTEQQCEAIADSVDILQIPALLCRQTDLLTAAAQ 156 GVGL +G IF ++K ++G P++TDVH +Q +A+ D+LQ+PA L RQTDL+ A A+ Sbjct: 69 GVGLDEGLRIFEEVKARFGVPVITDVHEVEQAAPVAEVADVLQVPAFLARQTDLVVAIAK 128 Query: 157 TGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIM--T 214 TG+ +N+KK QF+SP +M +++ K G V+ CERG+SFGY+ LV DM M T Sbjct: 129 TGKPVNIKKPQFMSPTQMKHVVSKCREAGNDRVILCERGSSFGYDNLVVDMLGFRQMKRT 188 Query: 215 SMGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLETHQDPDNAPSD 274 + +PVIFD +HS+Q G SGG R+ ++ LA+A +A+G+AG+FLE H DPD A D Sbjct: 189 TGDLPVIFDVTHSLQCRDPLGAASGGRRRQVLDLARAGMAVGLAGLFLEAHPDPDRARCD 248 Query: 275 GPNMINIKDLPKLLSQLLAIDKIIK 299 GP+ + + L LSQ+ A+D ++K Sbjct: 249 GPSALPLDQLEPFLSQVKALDDLVK 273 >gnl|CDD|178601 PLN03033, PLN03033, 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional. Length = 290 Score = 280 bits (718), Expect = 3e-76 Identities = 124/262 (47%), Positives = 169/262 (64%), Gaps = 5/262 (1%) Query: 43 QRFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKK 102 + F L+AGP IES +H +A+ + I L + LV+KSSFDKANR+S RG G+ + Sbjct: 15 EPFFLLAGPNVIESEEHILRMAKHIKDISTKLGLPLVFKSSFDKANRTSSKSFRGPGMAE 74 Query: 103 GREIFRDLKKKYGFPILTDVHTEQQCEAIADSVDILQIPALLCRQTDLLTAAAQTGRVIN 162 G +I +K Y PI+TDVH QCEA+ DI+QIPA LCRQTDLL AAA+TG++IN Sbjct: 75 GLKILEKVKVAYDLPIVTDVHESSQCEAVGKVADIIQIPAFLCRQTDLLVAAAKTGKIIN 134 Query: 163 VKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIMTSMGVPVIF 222 +KKGQF +P M N +K+ G +V+ CERGT FGYN L+ D R++ M PV+ Sbjct: 135 IKKGQFCAPSVMRNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPVVA 194 Query: 223 DASHSVQQPGIH-----GNCSGGERQYIVPLAKAAVAIGIAGIFLETHQDPDNAPSDGPN 277 D +HS+QQP G SGG R+ I +A+ AVA+G+ GIF+E H DP +AP DGP Sbjct: 195 DITHSLQQPAGKKLDGGGVASGGLRELIPCIARTAVAVGVDGIFMEVHDDPLSAPVDGPT 254 Query: 278 MINIKDLPKLLSQLLAIDKIIK 299 ++ L +LL +L+AI ++ K Sbjct: 255 QWPLRHLEELLEELIAIARVTK 276 >gnl|CDD|184028 PRK13398, PRK13398, 3-deoxy-7-phosphoheptulonate synthase; Provisional. Length = 266 Score = 130 bits (328), Expect = 5e-31 Identities = 76/269 (28%), Positives = 141/269 (52%), Gaps = 39/269 (14%) Query: 42 EQRFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLK 101 + ++IAGPC +ES + +AEKL + + G +K R+S +G+G + Sbjct: 25 GEEKIIIAGPCAVESEEQMVKVAEKLKELGVHMLRGGAFKP------RTSPYSFQGLGEE 78 Query: 102 KGREIFRDLKKKYGFPILTDVHTEQQCEAIADSVDILQIPALLCRQTDLLTAAAQTGRVI 161 G +I +++ KY P++T+V + E +AD D+LQI + + +LL +T + I Sbjct: 79 -GLKILKEVGDKYNLPVVTEVMDTRDVEEVADYADMLQIGSRNMQNFELLKEVGKTKKPI 137 Query: 162 NVKKGQFLSPWEMHNILQK-LHA------HGAKDVLFCERGT----SFGYNTLVTDMRSI 210 +K+G M L++ L+A G ++V+ CERG ++ NTL D+ ++ Sbjct: 138 LLKRG-------MSATLEEWLYAAEYIMSEGNENVVLCERGIRTFETYTRNTL--DLAAV 188 Query: 211 PIMTSMG-VPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLETHQDPD 269 ++ + +P+I D SH+ G R+ ++P+AKAA+A G G+ +E H +P+ Sbjct: 189 AVIKELSHLPIIVDPSHAT-----------GRRELVIPMAKAAIAAGADGLMIEVHPEPE 237 Query: 270 NAPSDGPNMINIKDLPKLLSQLLAIDKII 298 A SD +N +++ +L+ +L + K + Sbjct: 238 KALSDARQTLNFEEMKELVDELKPMAKAL 266 >gnl|CDD|181535 PRK08673, PRK08673, 3-deoxy-7-phosphoheptulonate synthase; Reviewed. Length = 335 Score = 128 bits (324), Expect = 2e-30 Identities = 83/267 (31%), Positives = 138/267 (51%), Gaps = 37/267 (13%) Query: 44 RFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKG 103 + V+IAGPC +ES + IA + + G +K R+S +G+G ++G Sbjct: 93 KPVVIAGPCSVESEEQILEIARAVKEAGAQILRGGAFKP------RTSPYSFQGLG-EEG 145 Query: 104 REIFRDLKKKYGFPILTDVHTEQQCEAIADSVDILQIPALLCRQTDLLTAAAQTGRVINV 163 ++ + +++ G PI+T+V + E +A+ VDILQI A + DLL +T + + + Sbjct: 146 LKLLAEAREETGLPIVTEVMDPRDVELVAEYVDILQIGARNMQNFDLLKEVGKTNKPVLL 205 Query: 164 KKG------QFLSPWEMHNILQKLHAHGAKDVLFCERGT----SFGYNTLVTDMRSIPIM 213 K+G ++L E IL A G +V+ CERG + NTL D+ ++P++ Sbjct: 206 KRGMSATIEEWLMAAEY--IL----AEGNPNVILCERGIRTFETATRNTL--DLSAVPVI 257 Query: 214 TSMG-VPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLETHQDPDNAP 272 + +PVI D SH+ G+R + PLA AAVA G G+ +E H DP+ A Sbjct: 258 KKLTHLPVIVDPSHAT-----------GKRDLVEPLALAAVAAGADGLIVEVHPDPEKAL 306 Query: 273 SDGPNMINIKDLPKLLSQLLAIDKIIK 299 SDGP + ++ +L+ +L AI + + Sbjct: 307 SDGPQSLTPEEFEELMKKLRAIAEALG 333 >gnl|CDD|162318 TIGR01361, DAHP_synth_Bsub, phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis. Length = 260 Score = 128 bits (323), Expect = 2e-30 Identities = 75/263 (28%), Positives = 132/263 (50%), Gaps = 35/263 (13%) Query: 42 EQRFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLK 101 E ++IAGPC +ES + A + + G +K R+S +G+G + Sbjct: 23 EGSPIVIAGPCSVESEEQIMETARFVKEAGAKILRGGAFKP------RTSPYSFQGLG-E 75 Query: 102 KGREIFRDLKKKYGFPILTDVHTEQQCEAIADSVDILQIPALLCRQTDLLTAAAQTGRVI 161 +G ++ R ++G P++T+V + E +A+ DILQI A + +LL + G+ + Sbjct: 76 EGLKLLRRAADEHGLPVVTEVMDPRDVEIVAEYADILQIGARNMQNFELLKEVGKQGKPV 135 Query: 162 NVKKGQFLSPWEMHNILQK-LHA------HGAKDVLFCERGT-SFGYNTLVT-DMRSIPI 212 +K+G M N +++ L+A G +V+ CERG +F T T D+ ++P+ Sbjct: 136 LLKRG-------MGNTIEEWLYAAEYILSSGNGNVILCERGIRTFEKATRNTLDLSAVPV 188 Query: 213 MTSMG-VPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLETHQDPDNA 271 + +P+I D SH+ G R ++PLAKAA+A G G+ +E H DP+ A Sbjct: 189 LKKETHLPIIVDPSHA-----------AGRRDLVIPLAKAAIAAGADGLMIEVHPDPEKA 237 Query: 272 PSDGPNMINIKDLPKLLSQLLAI 294 SD + ++ +L+ +L A+ Sbjct: 238 LSDSKQQLTPEEFKRLVKELRAL 260 >gnl|CDD|172030 PRK13397, PRK13397, 3-deoxy-7-phosphoheptulonate synthase; Provisional. Length = 250 Score = 107 bits (269), Expect = 3e-24 Identities = 74/249 (29%), Positives = 122/249 (48%), Gaps = 23/249 (9%) Query: 47 LIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREI 106 I GPC IES+DH + A + + G YK R+S A +G+GL+ G Sbjct: 18 FIVGPCSIESYDHIRLAASSAKKLGYNYFRGGAYKP------RTSAASFQGLGLQ-GIRY 70 Query: 107 FRDLKKKYGFPILTDVHTEQQCEAIADSVDILQIPALLCRQTDLLTAAAQTGRVINVKKG 166 ++ +++G ++++ +E+Q E D +D++Q+ A + + L + + I K+G Sbjct: 71 LHEVCQEFGLLSVSEIMSERQLEEAYDYLDVIQVGARNMQNFEFLKTLSHIDKPILFKRG 130 Query: 167 QFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTL---VTDMRSIPIMTS-MGVPVIF 222 + E L L G +++ CERG GY+ + D+ ++PI+ +P+I Sbjct: 131 LMATIEEYLGALSYLQDTGKSNIILCERGVR-GYDVETRNMLDIMAVPIIQQKTDLPIIV 189 Query: 223 DASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLETHQDPDNAPSDGPNMINIK 282 D SHS G R ++P AK A A+G GI +E H DPD+A SD I+ K Sbjct: 190 DVSHST-----------GRRDLLLPAAKIAKAVGANGIMMEVHPDPDHALSDAAQQIDYK 238 Query: 283 DLPKLLSQL 291 L +L +L Sbjct: 239 QLEQLGQEL 247 >gnl|CDD|183614 PRK12595, PRK12595, bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed. Length = 360 Score = 101 bits (255), Expect = 2e-22 Identities = 77/266 (28%), Positives = 129/266 (48%), Gaps = 33/266 (12%) Query: 34 KNQVTFSNEQRFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLA 93 K +V Q F I GPC +ES++ +A+ L A L G +K R+S Sbjct: 110 KGEVIGDGNQSF--IFGPCSVESYEQVEAVAKALKAKGLKLLRGGAFKP------RTSPY 161 Query: 94 GKRGVGLKKGREIFRDLKKKYGFPILTDVHTEQQCEAIADSVDILQIPALLCRQTDLLTA 153 +G+G++ G +I + + +YG +++++ E D VD++QI A + +LL A Sbjct: 162 DFQGLGVE-GLKILKQVADEYGLAVISEIVNPADVEVALDYVDVIQIGARNMQNFELLKA 220 Query: 154 AAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGY-----NTLVTDMR 208 A + + + +K+G + E + + + G ++ CERG Y NTL D+ Sbjct: 221 AGRVNKPVLLKRGLSATIEEFIYAAEYIMSQGNGQIILCERGIR-TYEKATRNTL--DIS 277 Query: 209 SIPIM---TSMGVPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLETH 265 ++PI+ T + PV+ D +HS G R ++P AKAA+AIG G+ E H Sbjct: 278 AVPILKQETHL--PVMVDVTHS-----------TGRRDLLLPTAKAALAIGADGVMAEVH 324 Query: 266 QDPDNAPSDGPNMINIKDLPKLLSQL 291 DP A SD ++I + + L +L Sbjct: 325 PDPAVALSDSAQQMDIPEFDRFLDEL 350 >gnl|CDD|184027 PRK13396, PRK13396, 3-deoxy-7-phosphoheptulonate synthase; Provisional. Length = 352 Score = 83.3 bits (206), Expect = 7e-17 Identities = 73/273 (26%), Positives = 122/273 (44%), Gaps = 34/273 (12%) Query: 37 VTFSNEQRFVLIAGPCQIESHDHAFMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKR 96 V F V++AGPC +E+ + A+++ A G YK R+S + Sbjct: 94 VPFGENHPVVVVAGPCSVENEEMIVETAKRVKAAGAKFLRGGAYKP------RTSPYAFQ 147 Query: 97 GVGLKKGREIFRDLKKKYGFPILTDVHTEQQCEAIADSVDILQIPALLCRQTDLLTAAAQ 156 G G + E+ ++ G I+T+V E IA+ D++Q+ A + LL Sbjct: 148 GHG-ESALELLAAAREATGLGIITEVMDAADLEKIAEVADVIQVGARNMQNFSLLKKVGA 206 Query: 157 TGRVINVKKGQ--FLSPWEM--HNILQKLHAHGAKDVLFCERG-----TSFGYNTLVTDM 207 + + +K+G + W M IL A G +V+ CERG + NTL D+ Sbjct: 207 QDKPVLLKRGMAATIDEWLMAAEYIL----AAGNPNVILCERGIRTFDRQYTRNTL--DL 260 Query: 208 RSIPIMTSMG-VPVIFDASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLETHQ 266 IP++ S+ +P++ D SH G+ +Y+ +A AA+A G + +E H Sbjct: 261 SVIPVLRSLTHLPIMIDPSHGT-----------GKSEYVPSMAMAAIAAGTDSLMIEVHP 309 Query: 267 DPDNAPSDGPNMINIKDLPKLLSQLLAIDKIIK 299 +P A SDGP + +L+ +L I K + Sbjct: 310 NPAKALSDGPQSLTPDRFDRLMQELAVIGKTVG 342 >gnl|CDD|149647 pfam08660, Alg14, Oligosaccharide biosynthesis protein Alg14 like. Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane. Length = 166 Score = 28.8 bits (65), Expect = 1.7 Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 7/58 (12%) Query: 61 FMIAEKLYAICQSLNIGLVYKSSFDKANRSSLAGKRGVGLKKGREIF----RDLKKKY 114 F +A KL I +VY SF + SL+GK L + F +LKKKY Sbjct: 103 FCLAAKLLKILGLKGTKIVYIESFARVKTLSLSGKL---LYPLADRFIVQWPELKKKY 157 >gnl|CDD|180854 PRK07121, PRK07121, hypothetical protein; Validated. Length = 492 Score = 27.5 bits (62), Expect = 3.8 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 4/32 (12%) Query: 226 HSVQQPGIHGNCSGGERQYIVPLAKAAVAIGI 257 H VQ PG SGG + PLAK A A+G+ Sbjct: 165 HRVQGPGD----SGGGAMLMDPLAKRAAALGV 192 >gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional. Length = 256 Score = 27.4 bits (61), Expect = 4.3 Identities = 18/79 (22%), Positives = 30/79 (37%), Gaps = 10/79 (12%) Query: 103 GREIFRDLKKKYGFP-IL-------TDVHTEQQCEAIADSVDILQI--PALLCRQTDLLT 152 +E+ + ++ G+P IL T+ D ++ + LL Q Sbjct: 83 PKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGF 142 Query: 153 AAAQTGRVINVKKGQFLSP 171 GR+IN+ GQF P Sbjct: 143 DKKSGGRIINMTSGQFQGP 161 >gnl|CDD|149557 pfam08543, Phos_pyr_kin, Phosphomethylpyrimidine kinase. This enzyme EC:2.7.4.7 is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes. Length = 246 Score = 27.1 bits (61), Expect = 6.4 Identities = 17/53 (32%), Positives = 21/53 (39%), Gaps = 12/53 (22%) Query: 143 LLCRQTDLLT-----AAAQTGRVINVKKGQFLSPWEMHNILQKLHAHGAKDVL 190 L L+T A A TG I + +M +KL A GAK VL Sbjct: 115 ELLPLATLITPNLPEAEALTGIKIK-------TLEDMKEAAKKLLALGAKAVL 160 >gnl|CDD|184586 PRK14240, PRK14240, phosphate transporter ATP-binding protein; Provisional. Length = 250 Score = 26.6 bits (59), Expect = 8.8 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%) Query: 102 KGREIFRDLKKKYGFPILTDVHTEQQCEAIADSV 135 K E+ ++LKK Y I+T H QQ I+D Sbjct: 184 KIEELIQELKKDYTIVIVT--HNMQQASRISDKT 215 Database: CddB Posted date: Feb 4, 2011 9:54 PM Number of letters in database: 5,994,473 Number of sequences in database: 21,608 Lambda K H 0.321 0.137 0.404 Gapped Lambda K H 0.267 0.0660 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21608 Number of Hits to DB: 4,897,431 Number of extensions: 308577 Number of successful extensions: 631 Number of sequences better than 10.0: 1 Number of HSP's gapped: 610 Number of HSP's successfully gapped: 21 Length of query: 301 Length of database: 5,994,473 Length adjustment: 93 Effective length of query: 208 Effective length of database: 3,984,929 Effective search space: 828865232 Effective search space used: 828865232 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 57 (25.9 bits)