RPSBLAST alignment of GI: 254780669 and protein with PDBid: 2nwr
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ... Length = 267
Score = 217 bits (552), Expect = 3e-57
Identities = 123/257 (47%), Positives = 174/257 (67%), Gaps = 2/257 (0%)
Query: 44 RFVLIAGPCQIESHDHAFMIAEKLYAICQSL-NIGLVYKSSFDKANRSSLAGKRGVGLKK 102
+F++IAGP IES + + E++ + + + V+KSSFDKANRSS+ RG GL+
Sbjct: 3 KFLVIAGPNAIESEELLLKVGEEIKRLSEKFKEVEFVFKSSFDKANRSSIHSFRGHGLEY 62
Query: 103 GREIFRDLKKKYGFPILTDVHTEQQCEAIADSVDILQIPALLCRQTDLLTAAAQTGRVIN 162
G + R +K+++G I TD+H Q E +A+ DI+QIPA LCRQTDLL AAA+TGR +N
Sbjct: 63 GVKALRKVKEEFGLKITTDIHESWQAEPVAEVADIIQIPAFLCRQTDLLLAAAKTGRAVN 122
Query: 163 VKKGQFLSPWEMHNILQKLHAHGAKDVLFCERGTSFGYNTLVTDMRSIPIMTSMGVPVIF 222
VKKGQFL+PW+ N+++KL GAK++ ERGT+FGYN LV D RS+PIM VI+
Sbjct: 123 VKKGQFLAPWDTKNVVEKLKFGGAKEIYLTERGTTFGYNNLVVDFRSLPIMK-QWAKVIY 181
Query: 223 DASHSVQQPGIHGNCSGGERQYIVPLAKAAVAIGIAGIFLETHQDPDNAPSDGPNMINIK 282
DA+HSVQ PG G+ SGG R++I PL +AAVA+G G+F+ETH +P+ A SD + +
Sbjct: 182 DATHSVQLPGGLGDKSGGMREFIFPLIRAAVAVGCDGVFMETHPEPEKALSDASTQLPLS 241
Query: 283 DLPKLLSQLLAIDKIIK 299
L ++ +L I ++
Sbjct: 242 QLEGIIEAILEIREVAS 258