HHsearch alignment for GI: 254780670 and conserved domain: cd03317
>cd03317 NAAAR N-acylamino acid racemase (NAAAR), an octameric enzyme that catalyzes the racemization of N-acylamino acids. NAAARs act on a broad range of N-acylamino acids rather than amino acids. Enantiopure amino acids are of industrial interest as chiral building blocks for antibiotics, herbicides, and drugs. NAAAR is a member of the enolase superfamily, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=99.59 E-value=7.7e-13 Score=115.45 Aligned_cols=287 Identities=20% Similarity=0.293 Sum_probs=194.5
Q ss_pred EEEEEECCCCCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH
Q ss_conf 86886079784299999984897676634478664775467626898651680489999999875678975988557898
Q gi|254780670|r 8 AREVIDSRGSPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAFVNDEIRTALLGCDARDQLL 87 (424)
Q Consensus 8 ~r~IlDSRG~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~in~~i~~~L~g~~~~dQ~~ 87 (424)
T Consensus 17 s~~~~~~~--~~vlv~I~td~G~~G~GE~~~~~-------------~p~~~~e~~~~~~~~l~~~~~p~l~g~~~~~~~~ 81 (354)
T cd03317 17 SFGTLNER--EFLIVELTDEEGITGYGEVVAFE-------------GPFYTEETNATAWHILKDYLLPLLLGREFSHPEE 81 (354)
T ss_pred CCEEEEEE--EEEEEEEEECCCCEEEEECCCCC-------------CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHH
T ss_conf 79999999--99999999899999998325788-------------8875704499999999999899976999899999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEC
Q ss_conf 88646530366432212322220244899875266349848882253245647543000003664556776610256514
Q gi|254780670|r 88 IDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNILNGGIHADNALDFQEFMIMP 167 (424)
Q Consensus 88 iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~NiinGG~HA~~~l~iQEfmIiP 167 (424)
T Consensus 82 ~~~~~~~~~g~~-------~A~said~ALwDl~gK~~~~Pv~~LLGg~~-~~i~~~~s----~~---------------- 133 (354)
T cd03317 82 VSERLAPIKGNN-------MAKAGLEMAVWDLYAKAQGQSLAQYLGGTR-DSIPVGVS----IG---------------- 133 (354)
T ss_pred HHHHHHHCCCCH-------HHHHHHHHHHHHHHHHHCCCCHHHHHCCCC-CEEEEEEE----CC----------------
T ss_conf 999987544857-------999999999999999883996799808987-60576687----16----------------
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHH
Q ss_conf 887748999899999999999875200001---36765576448868468999999999975385311102343110465
Q gi|254780670|r 168 VGAENIREAIRMGAEVFHTLKKELKSKGYS---TNVGDEGGFSPNLKTADSALDLIANSIEKAGYNAGKDLLIALDCAAS 244 (424)
Q Consensus 168 ~g~~sf~eal~~~~ev~~~lk~~L~~~g~~---t~vgDEGGfap~~~~~eeaL~ll~eAi~~aGy~~g~di~i~lD~AAs 244 (424)
T Consensus 134 ~-~~~~e~~~~~-------~~~~-~~~Gf~~~Kikv~------~~~-d-i~~v----~~ir~~~---~-d~~l~vDa--- 185 (354)
T cd03317 134 I-QDDVEQLLKQ-------IERY-LEEGYKRIKLKIK------PGW-D-VEPL----KAVRERF---P-DIPLMADA--- 185 (354)
T ss_pred C-CCCHHHHHHH-------HHHH-HHCCCCEEEEECC------CHH-H-HHHH----HHHHHHC---C-CCEEEEEC---
T ss_conf 8-9999999999-------9999-9779876764018------512-5-9999----9999865---7-97399626---
Q ss_pred HHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCEEECCHHHHHHHH
Q ss_conf 32027851111468656878999999987654486997767631042379988642388368504300002148885210
Q gi|254780670|r 245 AFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQLVGDDLFVTNPERLHKGI 324 (424)
Q Consensus 245 efy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~IvGDDL~vTn~~rl~~gi 324 (424)
T Consensus 186 ----N---------~~~~~~~a-~~~~~-l~~~~l~~~EeP~~~~d~~~~~~l~~~~~--~pIa~~E-~~~~~~~~~~~i 247 (354)
T cd03317 186 ----N---------SAYTLADI-PLLKR-LDEYGLLMIEQPLAADDLIDHAELQKLLK--TPICLDE-SIQSAEDARKAI 247 (354)
T ss_pred ----C---------CCCCHHHH-HHHHH-HCCCCEEEEECCCCCCCHHHHHHHHCCCC--CCEECCC-CCCCHHHHHHHH
T ss_conf ----8---------88887899-99997-33067013444687227777655641589--9888188-868878899998
Q ss_pred HCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCH
Q ss_conf 038652234254530038999999999998798699950788872358998999819980
Q gi|254780670|r 325 NEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVATNCGQ 384 (424)
Q Consensus 325 ~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~~a~~ 384 (424)
T Consensus 248 ~~~a~div~~d~~~~GGit~~~~ia~~A~~~gi~~~~g~~~-~s~i~~aa~~~la~~~~~ 306 (354)
T cd03317 248 ELGACKIINIKPGRVGGLTEALKIHDLCQEHGIPVWCGGML-ESGIGRAHNVALASLPNF 306 (354)
T ss_pred HCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEECCCC-CCHHHHHHHHHHHHCCCC
T ss_conf 76997646545653670999999999999839978876864-139999999999848786