HHsearch results for GI: 254780670 and protein with PDBid: 1nu5_A
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=99.80 E-value=7.7e-16 Score=136.03 Aligned_cols=305 Identities=16% Similarity=0.198 Sum_probs=206.6
Q ss_pred CEEEEEEEEEE--------EECCC----CCEEEEEEEECCCCEEEEECC-CCCCCCCCEEEEECCCCCCCCCCHHHHHHH
Q ss_conf 91058998688--------60797----842999999848976766344-786647754676268986516804899999
Q gi|254780670|r 1 MFINDIIAREV--------IDSRG----SPTIEVDVCLEDGSTGRAMVP-SGASTGIHEAFELRDQEKRYFGKGVLKAIA 67 (424)
Q Consensus 1 m~I~~i~~r~I--------lDSRG----~PTvEvev~~~~g~~gra~~P-SGaStG~~Ea~elrD~~~~~~G~gV~~Av~ 67 (424)
|+|++|....+ -.|+| +.+|-|+|.+ +|..|.+-+. .+. ..|.+.....+..
T Consensus 1 MkI~~i~~~~~~~Pl~~p~~~s~~~~~~~~~~lv~i~~-dG~~G~GE~~~~~~--------------~~~~~e~~~~~~~ 65 (370)
T 1nu5_A 1 MKIEAISTTIVDVPTRRPLQMSFTTVHKQSYVIVQVKA-GGLVGIGEGGSVGG--------------PTWGSESAETIKV 65 (370)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEE-TTEEEEEEECCSTT--------------TTTSSCCHHHHHH
T ss_pred CEEEEEEEEEEECCCCCCEECCCEEEEEEEEEEEEEEE-CCCEEEEEECCCCC--------------CCCCCCCHHHHHH
T ss_conf 98989999999665578768766589988999999998-99199997537788--------------8747568999999
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEE
Q ss_conf 99875678975988557898886465303664322123222202448998752663498488822532456475430000
Q gi|254780670|r 68 FVNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNI 147 (424)
Q Consensus 68 ~in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~Ni 147 (424)
.+++.++|.|+|+++.+...+...|-..-. -...+.-|+.+|++-+.++..++|||+.|++......|+...
T Consensus 66 ~i~~~~~~~l~g~~~~~~~~~~~~~~~~~~------~~~~a~said~Al~Dl~gK~~~~pl~~llg~~~~~~~~~~~~-- 137 (370)
T 1nu5_A 66 IIDNYLAPLLVGKDASNLSQARVLMDRAVT------GNLSAKAAIDIALHDLKARALNLSIADLIGGTMRTSIPIAWT-- 137 (370)
T ss_dssp HHHHTHHHHHTTSBTTCHHHHHHHHHHHCS------SCHHHHHHHHHHHHHHHHHHTTCBHHHHHTCCSCSEEEBCEE--
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHCCC------CCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCC--
T ss_conf 999988898728987779999998752134------756799999997878864130000121068756544444321--
Q ss_pred CCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 03664556776610256514887748999899999999999875200001367655764488684689999999999753
Q gi|254780670|r 148 LNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYSTNVGDEGGFSPNLKTADSALDLIANSIEKA 227 (424)
Q Consensus 148 inGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t~vgDEGGfap~~~~~eeaL~ll~eAi~~a 227 (424)
+..+ +..+.+.. ..+.++.+++..-.- -....+..+-++.+....+..
T Consensus 138 ~~~~--------------------~~~~~~~~-------~~~~~~~~g~~~~k~-----~~~~~~~~~d~~~i~~~~~~~ 185 (370)
T 1nu5_A 138 LASG--------------------DTARDIDS-------ALEMIETRRHNRFKV-----KLGARTPAQDLEHIRSIVKAV 185 (370)
T ss_dssp ECSS--------------------CHHHHHHH-------HHHHHHTTSCSEEEE-----ECSSSCHHHHHHHHHHHHHHH
T ss_pred CCCC--------------------CCHHHHHH-------HHHHHHHHHCCCEEE-----CCCCCCHHHHHHHHHHHHHHH
T ss_conf 2478--------------------82345688-------888887540100121-----137776799999999999872
Q ss_pred CCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEEE
Q ss_conf 85311102343110465320278511114686568789999999876544869977676310423799886423883685
Q gi|254780670|r 228 GYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQL 307 (424)
Q Consensus 228 Gy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~I 307 (424)
|.++.|-+|+ +.-.+.++-+.+... +++|++.+||+|+..+|++++.+|.+..+ +-|
T Consensus 186 ----~~~~~l~vDa----------------N~~~~~~~a~~~~~~-l~~~~i~~iEeP~~~~~~~~~~~l~~~~~--ipi 242 (370)
T 1nu5_A 186 ----GDRASVRVDV----------------NQGWDEQTASIWIPR-LEEAGVELVEQPVPRANFGALRRLTEQNG--VAI 242 (370)
T ss_dssp ----GGGCEEEEEC----------------TTCCCHHHHHHHHHH-HHHHTCCEEECCSCTTCHHHHHHHHHHCS--SEE
T ss_pred ----CCCCEEECCC----------------CCCCCHHHHHHHHHH-HHHCCCEEEEECCCCCCHHHHHHHHHHCC--CCC
T ss_conf ----8664452157----------------778899999999999-87438607880467210358999997447--986
Q ss_pred ECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCHH
Q ss_conf 043000021488852100386522342545300389999999999987986999507888723589989998199801
Q gi|254780670|r 308 VGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVATNCGQI 385 (424)
Q Consensus 308 vGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~~a~~i 385 (424)
.+|.- +.++.-+.+.++.++++.+.+||..+|.+|++++.+++|+++|..+++++ .-|+.=.+.+.+.++...+..
T Consensus 243 a~dE~-~~~~~~~~~~i~~~~~d~~~~k~~~~GGit~~~~~~~~a~~~gi~~~~~~-~~~~~i~~~a~~hl~aa~~~~ 318 (370)
T 1nu5_A 243 LADES-LSSLSSAFELARDHAVDAFSLKLCNMGGIANTLKVAAVAEAAGISSYGGT-MLDSTVGTAAALHVYATLPSL 318 (370)
T ss_dssp EESTT-CCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECC-SSCCHHHHHHHHHHHTTSSCC
T ss_pred CCCCC-CCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECC-CCCCHHHHHHHHHHHHHCCCC
T ss_conf 37734-45545667777606777366345136789999999999998799399679-856699999999999977898