HHsearch results for GI: 254780670 and protein with PDBid: 1wuf_A
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, enolase superfamily; 2.90A {Listeria innocua CLIP11262} SCOP: c.1.11.2 d.54.1.1
Probab=97.17 E-value=0.0065 Score=40.40 Aligned_cols=275 Identities=20% Similarity=0.290 Sum_probs=170.8
Q ss_pred CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 77546762689865168048999999987567897598855789888646530366432212322220244899875266
Q gi|254780670|r 43 GIHEAFELRDQEKRYFGKGVLKAIAFVNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQ 122 (424)
Q Consensus 43 G~~Ea~elrD~~~~~~G~gV~~Av~~in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~ 122 (424)
|.-||..|.| |--.....|+-.|.+.+-|.|-.......++|..+.-=+.|.+ .+--||.+|++.|.|+
T Consensus 65 geleafplpd----yteetlssailiikeqllpllaqrkirkpeeiqelfswiqgne-------makaavelavwdafak 133 (393)
T 1wuf_A 65 GELEAFPLPD----YTEETLSSAILIIKEQLLPLLAQRKIRKPEEIQELFSWIQGNE-------MAKAAVELAVWDAFAK 133 (393)
T ss_dssp EEECCCSSTT----SSSCCHHHHHHHHHHTTHHHHHHCEESSTTHHHHHHTTSCSCH-------HHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCH-------HHHHHHHHHHHHHHHH
T ss_conf 5203457997----2277775689999987778887630388799999999971438-------9999999999999998
Q ss_pred HCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 34984888225324564754300000366455677661025651488774899989999999999987520000136765
Q gi|254780670|r 123 TSNLPLYKYLGGCSAHILPVPLMNILNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYSTNVGD 202 (424)
Q Consensus 123 ~~~~pLy~yl~~~~~~~lP~P~~NiinGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t~vgD 202 (424)
..+..|-+.++.+.. ++.+-. .+..| .+.+.-++.. ..--++|+..-
T Consensus 134 mekrslakmigatke-sikvgv------------siglq---------qnvetllqlv--------nqyvdqgyerv--- 180 (393)
T 1wuf_A 134 MEKRSLAKMIGATKE-SIKVGV------------SIGLQ---------QNVETLLQLV--------NQYVDQGYERV--- 180 (393)
T ss_dssp HTTSBHHHHTTCCCS-EEEBCE------------EECCC---------SCHHHHHHHH--------HHHHHHTCCEE---
T ss_pred HHHHHHHHHHCCCHH-HEEEEE------------EEEHH---------HHHHHHHHHH--------HHHHHCCHHHE---
T ss_conf 878789998553332-355425------------64065---------4199999999--------99885312405---
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEE
Q ss_conf 57644886846899999999997538531110234311046532027851111468656878999999987654486997
Q gi|254780670|r 203 EGGFSPNLKTADSALDLIANSIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSI 282 (424)
Q Consensus 203 EGGfap~~~~~eeaL~ll~eAi~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sI 282 (424)
.=-.+|+-+- + .++|+.+.=- .++|-.-|+.-|+ ++++. +.+-.+.|.+-.|
T Consensus 181 klkiapnkdi--q----fveavrksfp------klslmadansayn--------------redfl--llkeldqydlemi 232 (393)
T 1wuf_A 181 KLKIAPNKDI--Q----FVEAVRKSFP------KLSLMADANSAYN--------------REDFL--LLKELDQYDLEMI 232 (393)
T ss_dssp EEECBTTBSH--H----HHHHHHTTCT------TSEEEEECTTCCC--------------GGGHH--HHHTTGGGTCSEE
T ss_pred EEEECCCCCH--H----HHHHHHHHCC------CCEEHHCCCCCCC--------------HHHHH--HHHHHHHHHHHHH
T ss_conf 7652688750--8----9999985386------3100103432004--------------56668--8887756508987
Q ss_pred ECCCCCCCHHHHHHHHHHCCCCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 76763104237998864238836850430000214888521003865223425453003899999999999879869995
Q gi|254780670|r 283 EDGMSEDDWHGWKILTNKIGSNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIIS 362 (424)
Q Consensus 283 EDP~~e~D~~gw~~l~~~~g~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivS 362 (424)
|.||.-.||-.-..|++.+..+ |+-|.- ....+-++++-..++|.++-+|+-.+|-+|.++.....+.-+.+.+--.
T Consensus 233 eqpfgtkdfvdhawlqkqlktr--iclden-irsvkdveqahsigscrainlklarvggmssalkiaeycalneilvwcg 309 (393)
T 1wuf_A 233 EQPFGTKDFVDHAWLQKQLKTR--ICLDEN-IRSVKDVEQAHSIGSCRAINLKLARVGGMSSALKIAEYCALNEILVWCG 309 (393)
T ss_dssp ECCSCSSCSHHHHHHHTTCSSE--EEECTT-CCSHHHHHHHHHHTCCSEEEECTGGGTSHHHHHHHHHHHHHTTCEEEEC
T ss_pred HCCCCCCHHHHHHHHHHHHHHH--EEHHCC-CCHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 4667750256679999875311--402103-3434647865133521443223665347167889998876777999955
Q ss_pred CCCCCCCH--HHHHHHHHHHCCCHHEECCCCHHHH
Q ss_conf 07888723--5899899981998010075611448
Q gi|254780670|r 363 HRSGETED--HTIADLAVATNCGQIKTGSLARSDR 395 (424)
Q Consensus 363 hRSGETeD--~~iaDLAVg~~a~~iK~G~~~R~ER 395 (424)
|-.|. ----.+|.+....|+--|-.+.+.|
T Consensus 310 ---gmleagvgrahnialaarnefvfpgdisasnr 341 (393)
T 1wuf_A 310 ---GMLEAGVGRAHNIALAARNEFVFPGDISASNR 341 (393)
T ss_dssp ---CCCCCHHHHHHHHHHHTSSSCCSCBSCCCGGG
T ss_pred ---HHHHHCCCHHHHHHHHHCCCEECCCCCCHHCC
T ss_conf ---04452444265767875145225776431000