HHsearch results for GI: 254780670 and protein with PDBid: 2ovl_A

>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=99.66  E-value=4.8e-13  Score=115.38  Aligned_cols=294  Identities=18%  Similarity=0.212  Sum_probs=191.2

Q ss_pred             CEEEEEEEE--------EEEE-CCC----CCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHH
Q ss_conf             910589986--------8860-797----842999999848976766344786647754676268986516804899999
Q gi|254780670|r    1 MFINDIIAR--------EVID-SRG----SPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIA   67 (424)
Q Consensus         1 m~I~~i~~r--------~IlD-SRG----~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~   67 (424)
                      ++|++|+.+        .+.+ |+|    ...|-|+|++++|..|.+-+.+.   +             +.+..   ...
T Consensus         2 ~~I~~i~~~~~~iPl~~p~~~~s~g~~~~~~~viV~i~t~~G~~G~GE~~~~---~-------------~~~~~---~~~   62 (371)
T 2ovl_A            2 SLIERVRTDLYRIPLPTRLTDSTHGAMMDFELITVRIEDSDGATGLGYTYTV---N-------------HGGAA---VAT   62 (371)
T ss_dssp             -CEEEEEEEEEEEEEEEEEBCTTTCCEEEEEEEEEEEEETTSCEEEEEEEEE---S-------------SSHHH---HHH
T ss_pred             CCEEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEEEECCCCEEEEEEECC---C-------------CCHHH---HHH
T ss_conf             9488999999980289985425777188888999999989999899988798---8-------------86799---999


Q ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHHH-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEE
Q ss_conf             998756789759885578988864653-0366432212322220244899875266349848882253245647543000
Q gi|254780670|r   68 FVNDEIRTALLGCDARDQLLIDKIMID-LDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMN  146 (424)
Q Consensus        68 ~in~~i~~~L~g~~~~dQ~~iD~~Li~-lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~N  146 (424)
                      .+++.+.|.|+|+++.+...+-+.|.. +.-..+. ..-..|+-|+.+|++-+.++..++|||+.|++.... .|++...
T Consensus        63 ~i~~~l~~~lig~d~~~~~~~~~~~~~~~~~~~~~-g~~~~A~said~AlwDl~gK~~~~Pl~~llG~~~~~-~~~~~~~  140 (371)
T 2ovl_A           63 MVDKDLRGCLLGADAEQIEKIWQSMWWRLHYAGRG-GHATSAISAVDIALWDLKGIRARTPLWKLFGGYDPV-VPVYAGG  140 (371)
T ss_dssp             HHHHTTHHHHTTSCTTCHHHHHHHHHHHTCTTCSS-THHHHHHHHHHHHHHHHHHHHTTSBHHHHTTCCCSE-EEEEEEC
T ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC-CHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC-CEEEECC
T ss_conf             99999899866998567999999999853321665-368899999999999997757448188956776556-2144114


Q ss_pred             ECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             003664556776610256514887748999899999999999875200001---36765576448868468999999999
Q gi|254780670|r  147 ILNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYS---TNVGDEGGFSPNLKTADSALDLIANS  223 (424)
Q Consensus       147 iinGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~---t~vgDEGGfap~~~~~eeaL~ll~eA  223 (424)
                      ..                    ...+..+..+       .+++.+ ++|+.   ..+|.        .+.++-++.+...
T Consensus       141 ~~--------------------~~~~~~~~~~-------~~~~~~-~~Gf~~~K~Kvg~--------~~~~~di~~v~~i  184 (371)
T 2ovl_A          141 ID--------------------LELPVADLKT-------QADRFL-AGGFRAIKMKVGR--------PDLKEDVDRVSAL  184 (371)
T ss_dssp             CB--------------------TTSCHHHHHH-------HHHHHH-HTTCSCEEEECCC--------SSHHHHHHHHHHH
T ss_pred             CC--------------------CCCCHHHHHH-------HHHHHH-HCCCCEEEECCCC--------CCHHHHHHHHHHH
T ss_conf             46--------------------7899999999-------999999-7388778304576--------6479999999999


Q ss_pred             HHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCC
Q ss_conf             97538531110234311046532027851111468656878999999987654486997767631042379988642388
Q gi|254780670|r  224 IEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGS  303 (424)
Q Consensus       224 i~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~  303 (424)
                      -+..    |.++.|.+|+                +.-++.++-+.+...| ++|++.+||+|+..+|+++..++.++.+ 
T Consensus       185 r~~~----g~~~~l~vDa----------------N~~~~~~~A~~~~~~l-~~~~~~~iEeP~~~~~~~~~~~l~~~~~-  242 (371)
T 2ovl_A          185 REHL----GDSFPLMVDA----------------NMKWTVDGAIRAARAL-APFDLHWIEEPTIPDDLVGNARIVRESG-  242 (371)
T ss_dssp             HHHH----CTTSCEEEEC----------------TTCSCHHHHHHHHHHH-GGGCCSEEECCSCTTCHHHHHHHHHHHC-
T ss_pred             HHHC----CCCCEEEECC----------------CCCCCHHHHHHHHHHH-HCCCCCEEECCCCCCCHHHHHHHHHCCC-
T ss_conf             9875----8762277636----------------7789999999999975-3139946864778537888999985247-


Q ss_pred             CEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHH
Q ss_conf             36850430000214888521003865223425453003899999999999879869995078887235899899981
Q gi|254780670|r  304 NCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVAT  380 (424)
Q Consensus       304 ~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~  380 (424)
                       +-|..|. -++++.-+.+.++.++++-+.+|+...|.+|++++.+.+|+++|+.+++ |..++    .-+|++.++
T Consensus       243 -ipia~dE-~~~~~~~~~~~i~~~a~di~~~d~~~~GGit~~~~i~~~A~~~gi~v~~-h~~~~----~~~h~~aa~  312 (371)
T 2ovl_A          243 -HTIAGGE-NLHTLYDFHNAVRAGSLTLPEPDVSNIGGYTTFRKVAALAEANNMLLTS-HGVHD----LTVHALASV  312 (371)
T ss_dssp             -SCEEECT-TCCSHHHHHHHHHHTCCSEECCCTTTTTSHHHHHHHHHHHHHTTCCEEE-CSCHH----HHHHHHTSC
T ss_pred             -CCCCCCC-CCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEE-CCHHH----HHHHHHHHC
T ss_conf             -8755873-0055888999997599888972823169889999999999986998982-58899----999999975