HHsearch results for GI: 254780670 and protein with PDBid: 2qq6_A
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=99.69 E-value=3e-14 Score=124.26 Aligned_cols=314 Identities=15% Similarity=0.201 Sum_probs=201.7
Q ss_pred EEEEEEEEEEEECCCCCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 10589986886079784299999984897676634478664775467626898651680489999999875678975988
Q gi|254780670|r 2 FINDIIAREVIDSRGSPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAFVNDEIRTALLGCD 81 (424)
Q Consensus 2 ~I~~i~~r~IlDSRG~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~in~~i~~~L~g~~ 81 (424)
.|+.|....+--. .|+|-|+|.++ |.+|.+-+.++ .+. ..+..+-+.++|.|+|+|
T Consensus 7 ~i~~i~~~~~r~~--~~~vlVrv~~d-g~~G~GE~~~~----~~~-----------------~~~~~i~~~l~~~LiG~d 62 (410)
T 2qq6_A 7 RITRVETAAIRAV--GPSVLVRVWAG-DEHGLGECYPS----APA-----------------AGIHHIVMNMEEQLLGED 62 (410)
T ss_dssp CCCEEEEEEECCC---CEEEEEEEET-TEEEEEEECCC----SCH-----------------HHHHHHHHTTHHHHTTCC
T ss_pred EEEEEEEEEECCC--CCCEEEEEEEC-CCEEEEECCCC----CCH-----------------HHHHHHHHHHHHHHCCCC
T ss_conf 7988878876577--98289999958-95899851288----549-----------------999999999999876998
Q ss_pred HHHHHHHHHHHHHCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCC
Q ss_conf 5578988864653036-643221232222024489987526634984888225324564754300000366455677661
Q gi|254780670|r 82 ARDQLLIDKIMIDLDG-TPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNILNGGIHADNALDF 160 (424)
Q Consensus 82 ~~dQ~~iD~~Li~lDg-T~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~NiinGG~HA~~~l~i 160 (424)
+.+.+.+-+.|..... ......+...|+.|+.+|++-+.++..++|||+.|++.....+|+ ..-++++ ..+.
T Consensus 63 ~~~~e~l~~~~~~~~~~~~~~~~~~~~A~said~AlwDl~gK~~g~Pl~~LLGg~~~~~ip~--yas~~~~-----~~~~ 135 (410)
T 2qq6_A 63 PRDVERLYEKMRRWNIFTGGQAGAVITALSGIETALWDLAGKLQGVPVYRLLGGAFRRRVRL--YADCNAG-----TVDA 135 (410)
T ss_dssp TTCHHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHTSCGGGGTTCCSCSEEEE--EEECCCS-----EECT
T ss_pred CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEE--EEECCCC-----CHHH
T ss_conf 22399999999973121356631889999999999999999984998888726545573457--7752778-----7666
Q ss_pred -EEEEEE-CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCCCC-----CC---CCHHHHHHHHHHHHHHC
Q ss_conf -025651-4887748999899999999999875200001---36765576448-----86---84689999999999753
Q gi|254780670|r 161 -QEFMIM-PVGAENIREAIRMGAEVFHTLKKELKSKGYS---TNVGDEGGFSP-----NL---KTADSALDLIANSIEKA 227 (424)
Q Consensus 161 -QEfmIi-P~g~~sf~eal~~~~ev~~~lk~~L~~~g~~---t~vgDEGGfap-----~~---~~~eeaL~ll~eAi~~a 227 (424)
.+.... .....+-.+-+ ...++ +.++|+. ..+|+.+++.. .. .+.++.++.+...-+.
T Consensus 136 ~~~~~~~~~~~~~s~e~~~-------~~a~~-~~~~Gf~~~Kikvg~~~~~~~~~~~~~~~~~~d~~~di~~v~avr~~- 206 (410)
T 2qq6_A 136 AAHHIEGGLFEEGSNEEYI-------AVARE-AVERGFDAIKLDVDDITGPLHRDFWNGAISPREHEAMVARVAAVREA- 206 (410)
T ss_dssp TCCEEECCTTCSTHHHHHH-------HHHHH-HHHTTCSEEEEECCCSSSTTCSCSSSCCCCHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHCCCCCCCCHHHHH-------HHHHH-HHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH-
T ss_conf 6654320444458999999-------99999-99779988997136767753333335677836589999999999997-
Q ss_pred CCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEEE
Q ss_conf 85311102343110465320278511114686568789999999876544869977676310423799886423883685
Q gi|254780670|r 228 GYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQL 307 (424)
Q Consensus 228 Gy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~I 307 (424)
.|.++.|.+|+ +..++.++-+.+... +++|.+..+|+|+..+|+++..++....+ +-|
T Consensus 207 ---~G~~~~l~vDa----------------N~~~~~~~Ai~~~~~-l~~~~i~~~EeP~~~~d~~~~~~l~~~~~--ipI 264 (410)
T 2qq6_A 207 ---VGPEVEVAIDM----------------HGRFDIPSSIRFARA-MEPFGLLWLEEPTPPENLDALAEVRRSTS--TPI 264 (410)
T ss_dssp ---HCSSSEEEEEC----------------TTCCCHHHHHHHHHH-HGGGCCSEEECCSCTTCHHHHHHHHTTCS--SCE
T ss_pred ---HCCCCEEECCC----------------CCCCCHHHHHHHHHH-HCCCCCCEEECCCCCCCHHHHHHHHHCCC--CCE
T ss_conf ---39854264266----------------667898999999998-51003335756888537888999987146--755
Q ss_pred ECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHH--HHHHHH
Q ss_conf 0430000214888521003865223425453003899999999999879869995078887235899--899981
Q gi|254780670|r 308 VGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIA--DLAVAT 380 (424)
Q Consensus 308 vGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~ia--DLAVg~ 380 (424)
.+|. .+.++..+++.+..++++.+.+|+..+|.+|++++.+.+|+.+|..+ +.|.. ++.=.+.+ ||+.++
T Consensus 265 a~gE-~~~~~~~~~~~i~~~~~d~~~~d~~~~GGit~~~~i~~lA~~~gi~v-~~h~~-~s~i~~aa~~hl~aa~ 336 (410)
T 2qq6_A 265 CAGE-NVYTRFDFRELFAKRAVDYVMPDVAKCGGLAEAKRIANLAELDYIPF-APHNV-SSPVGTVAAAHVCAAV 336 (410)
T ss_dssp EECT-TCCSHHHHHHHHHTTCCSEECCBHHHHTHHHHHHHHHHHHHTTTCCB-CCBCC-SCHHHHHHHHHHHHSC
T ss_pred ECCC-CCCCHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCEE-EEECC-CCHHHHHHHHHHHHHC
T ss_conf 4685-44788897777645886489965631686089999999999789709-96379-7389999999999977