HHsearch results for GI: 254780670 and protein with PDBid: 2rdx_A
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, putative; enolase, structural genomics, PSI, protein structure initiative, nysgrc; 2.00A {Roseovarius nubinhibens ism}
Probab=99.58 E-value=3.7e-12 Score=108.75 Aligned_cols=296 Identities=16% Similarity=0.116 Sum_probs=192.3
Q ss_pred CEEEEEEEEEEE---------ECCC-----CCEEEEEEEECCCCEEEEEC-CCCCCCCCCEEEEECCCCCCCCCCHHHHH
Q ss_conf 910589986886---------0797-----84299999984897676634-47866477546762689865168048999
Q gi|254780670|r 1 MFINDIIAREVI---------DSRG-----SPTIEVDVCLEDGSTGRAMV-PSGASTGIHEAFELRDQEKRYFGKGVLKA 65 (424)
Q Consensus 1 m~I~~i~~r~Il---------DSRG-----~PTvEvev~~~~g~~gra~~-PSGaStG~~Ea~elrD~~~~~~G~gV~~A 65 (424)
|+|++|...++- -+.+ +.++=|+|++++|..|.+-+ |.+...+.. ....
T Consensus 3 MKI~~i~~~~~~~Pl~~~~~~~~~~~~~~~~~~~iV~i~td~G~~G~GE~~~~~~~~~~~----------------~~~~ 66 (379)
T 2rdx_A 3 LRITRIRLYKTDLPYVDGSYGWGAGNAITVARASVVVIDTDAGLQGCGEFTPCGENYMIA----------------HSEG 66 (379)
T ss_dssp CCEEEEEEEEEEEEBTTSCCEETTTEECSEEEEEEEEEEETTSCEEEEEEBCSSTTSSSC----------------CTTH
T ss_pred CEEEEEEEEEEEECCCCCCCEECCCCEEEEEEEEEEEEEECCCCEEEEEEECCCCCCCHH----------------HHHH
T ss_conf 788489999996126678744446625763258999999899999998622788764220----------------5999
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCE
Q ss_conf 99998756789759885578988864653036643221232222024489987526634984888225324564754300
Q gi|254780670|r 66 IAFVNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLM 145 (424)
Q Consensus 66 v~~in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~ 145 (424)
++.+.+.+.|.|+|+|+.+...+.+.|...-.. ..-+.-|+.+|++-+.++..++|||+.|++.....+|+ .
T Consensus 67 ~~~~~~~l~~~l~g~d~~~~~~~~~~~~~~~~~------~~~a~~aid~AlwDl~~K~~g~pl~~lLgg~~~~~i~~--~ 138 (379)
T 2rdx_A 67 VDAFARLAAPQLLGQDPRQVARMERLMDHLVQG------HGYAKAPFDAAFWDILGQATGQPVWMLLGGKLCDGAPM--Y 138 (379)
T ss_dssp HHHHHHHHHHHHTTSCTTCHHHHHHHHHHHSSS------CHHHHHHHHHHHHHHHHHHHTCBHHHHTTSCCCSSEEB--C
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC------CHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCE--E
T ss_conf 999999866875389878999999999864024------37899999999999986362886243159864555530--1
Q ss_pred EECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 00036645567766102565148877489998999999999998752000013676557644886846899999999997
Q gi|254780670|r 146 NILNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYSTNVGDEGGFSPNLKTADSALDLIANSIE 225 (424)
Q Consensus 146 NiinGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t~vgDEGGfap~~~~~eeaL~ll~eAi~ 225 (424)
..+.+ .+..+..+. +.... +.|+..-.-. .| .+.++-++.+....+
T Consensus 139 ~~~~~--------------------~~~~e~~~~-------~~~~~-~~G~~~~K~k-~~-----~~~~~d~~~i~~ir~ 184 (379)
T 2rdx_A 139 RVAPQ--------------------RSEAETRAE-------LARHR-AAGYRQFQIK-VG-----ADWQSDIDRIRACLP 184 (379)
T ss_dssp EECCC--------------------SCSHHHHHH-------HHHHH-HTTCCEEEEE-CC-----SCHHHHHHHHHHHGG
T ss_pred CCCCC--------------------CCHHHHHHH-------HHHHH-HCCCCEEEEE-CC-----CCHHHHHHHHHHHHH
T ss_conf 04677--------------------998999899-------99987-4386224320-47-----871889999999763
Q ss_pred HCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCE
Q ss_conf 53853111023431104653202785111146865687899999998765448699776763104237998864238836
Q gi|254780670|r 226 KAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNC 305 (424)
Q Consensus 226 ~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~ 305 (424)
.. |.++.|.+|+- .-.+.++-+.+.. .+++|++...|.|+. ++.+..+..... +
T Consensus 185 ~~----g~~~~l~vDaN----------------~~~~~~~A~~~~~-~l~~~~~~~eEpp~~---~~~~~~~r~~~~--i 238 (379)
T 2rdx_A 185 LL----EPGEKAMADAN----------------QGWRVDNAIRLAR-ATRDLDYILEQPCRS---YEECQQVRRVAD--Q 238 (379)
T ss_dssp GS----CTTCEEEEECT----------------TCSCHHHHHHHHH-HTTTSCCEEECCSSS---HHHHHHHHTTCC--S
T ss_pred HC----CCCCEEECCCC----------------CCCCHHHHHHHHH-HHHHCCEECCCCCCH---HHHHHHHHHHHH--H
T ss_conf 02----87303532455----------------6789999999999-864056001478505---778999998531--0
Q ss_pred EEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHH--HHHHHHHHHCC
Q ss_conf 850430000214888521003865223425453003899999999999879869995078887235--89989998199
Q gi|254780670|r 306 QLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDH--TIADLAVATNC 382 (424)
Q Consensus 306 ~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~--~iaDLAVg~~a 382 (424)
-|..|. -+++..-+.+.++.++++.+.+||.-+|.+|++++.+.+|+++|+.+++.+ +.|+.=. ..+||+.++..
T Consensus 239 pia~~E-~~~~~~~~~~~~~~~~~d~i~~d~~~~GGit~~~~i~~~a~~~gi~~~~~~-~~~~~i~~~a~~hlaaa~~~ 315 (379)
T 2rdx_A 239 PMKLDE-CVTGLHMAQRIVADRGAEICCLKISNLGGLSKARRTRDFLIDNRMPVVAED-SWGGEIASAAVAHFAASTPE 315 (379)
T ss_dssp CEEECT-TCCSHHHHHHHHHHTCCSEEEEETTTTTSHHHHHHHHHHHHHTTCCEEEEC-SBCSHHHHHHHHHHHHTSCT
T ss_pred HHCCCC-CCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECC-CCCCHHHHHHHHHHHHHCCC
T ss_conf 010464-310025688887558755786246567859999999999998699299679-88768999999999995898