HHsearch results for GI: 254780670 and protein with PDBid: 3n6h_A
>3n6h_A Mandelate racemase/muconate lactonizing protein; structural genomics, protein structure initiative; 2.30A {Actinobacillus succinogenes} PDB: 3n6j_A
Probab=99.64 E-value=7.8e-15 Score=128.57 Aligned_cols=315 Identities=17% Similarity=0.125 Sum_probs=191.4
Q ss_pred EEEEEEEEEE--EECC-----C--CCE---EEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH
Q ss_conf 1058998688--6079-----7--842---99999984897676634478664775467626898651680489999999
Q gi|254780670|r 2 FINDIIAREV--IDSR-----G--SPT---IEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAFV 69 (424)
Q Consensus 2 ~I~~i~~r~I--lDSR-----G--~PT---vEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~i 69 (424)
+||+|...-| -||. | .|= .=|+|+|++|.+|.+-+|.+ ..+..+++
T Consensus 10 ~i~~~~~~~~~~~~~~~~~~~g~h~~~~~rtiV~V~Td~Gi~G~GEa~~~--------------------~~~~~~l~-- 67 (455)
T 3n6h_A 10 VITDMKVIPVAGHDSMLMNVGGAHSPYFTRNIVILTDNSGHTGVGEAPGG--------------------ATIENALT-- 67 (455)
T ss_dssp BEEEEEEEEEEEECCCEEETTEECCSEEEEEEEEEEETTSCEEEEEEECS--------------------HHHHHHHH--
T ss_pred EEEEEEEEEEECCCCHHCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCC--------------------HHHHHHHH--
T ss_conf 57889999851578220146676667532169999989999899965796--------------------89999999--
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCC---------CCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCC
Q ss_conf 875678975988557898886465303664322123---------22220244899875266349848882253245647
Q gi|254780670|r 70 NDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLG---------ANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHIL 140 (424)
Q Consensus 70 n~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lG---------aNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~l 140 (424)
.+.|.|+|+++.+.+.+.+.|.......+...+| ..|+-|+-+|++-+.++..++|||+.|++- ..+-
T Consensus 68 --~~~p~LiG~d~~~~e~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~A~saIDiALWDl~GK~~g~Pv~~LLGgg-~~r~ 144 (455)
T 3n6h_A 68 --EAIPHVVGRPISILNKIVNDMHNGYLDADYDTFGKGAWTFELRVNAVAALEAALLDLMGQFLGVPVAELLGPG-KQRD 144 (455)
T ss_dssp --HHGGGTTTCBGGGHHHHHHHHTC-------------CCHHHHHHHHHHHHHHHHHHHHHHHHTSBGGGTSTTC-CCCS
T ss_pred --HHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCC-CCCC
T ss_conf --9999975998789999999999753136720003554444306889999999999999988499599995799-8773
Q ss_pred CCCCEEECCC-CCCCCCCCCCEEEEEECCCCCCHHHHHHH----HHHHHHHHHHHHHHCCCCC---CCCCCCCCCCCCCC
Q ss_conf 5430000036-64556776610256514887748999899----9999999998752000013---67655764488684
Q gi|254780670|r 141 PVPLMNILNG-GIHADNALDFQEFMIMPVGAENIREAIRM----GAEVFHTLKKELKSKGYST---NVGDEGGFSPNLKT 212 (424)
Q Consensus 141 P~P~~NiinG-G~HA~~~l~iQEfmIiP~g~~sf~eal~~----~~ev~~~lk~~L~~~g~~t---~vgDEGGfap~~~~ 212 (424)
++|+...+.. +......+.. ...+.+...+.+.... .-+......+...+.|+.. .+|. .+
T Consensus 145 ~v~~y~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~KiKvG~--------~~ 213 (455)
T 3n6h_A 145 EVTVLGYLFYVGDDKITDLPY---QQPVTGKHEWYDIRRKKAMDTQAVIELAAASKDRYGFKDFKLKGGV--------FE 213 (455)
T ss_dssp EEEBCEEECEECCGGGSCSCC---CCCCCSSCHHHHHTTSCBCSHHHHHHHHHHHHHHHCCSEEEEECSS--------SC
T ss_pred EEEEEEEECCCCCCCCCCHHH---HHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCC--------CC
T ss_conf 688988850258765432033---3310221125555432047879999999999986499779995798--------88
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHH
Q ss_conf 68999999999975385311102343110465320278511114686568789999999876544869977676310423
Q gi|254780670|r 213 ADSALDLIANSIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWH 292 (424)
Q Consensus 213 ~eeaL~ll~eAi~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~ 292 (424)
.++-++.+ +++.++. + |+.|.+|+- ...+.++-+.+...| ++| +.++|+|+..+|+.
T Consensus 214 ~~~di~~v-~avr~~~--~--d~~l~vDaN----------------~~~~~~~Ai~~~~~L-e~~-~~w~EEP~~~~d~~ 270 (455)
T 3n6h_A 214 GSKEIDTV-IELKKHF--P--DARITLDPN----------------GCWSLDEAIQLCKGL-NDV-LTYAEDPCIGENGY 270 (455)
T ss_dssp HHHHHHHH-HHHHHHC--T--TSEEEEECT----------------TBSCHHHHHHHTTTC-TTT-CSEEESCBCCBTTB
T ss_pred HHHHHHHH-HHHHHHC--C--CCEEEEECC----------------CCCCHHHHHHHHHHH-HCC-CCEEECCCCCCCCH
T ss_conf 69999999-9999868--9--966998168----------------765899999999998-506-10898068854520
Q ss_pred HHH----HHHHHCCCCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCC
Q ss_conf 799----8864238836850430000214888521003865223425453003899999999999879869995078887
Q gi|254780670|r 293 GWK----ILTNKIGSNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGET 368 (424)
Q Consensus 293 gw~----~l~~~~g~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGET 368 (424)
+.. ++....+ +-|.+|. .+.+...+.+.++.+++..++.+ .+.|.+|+++..+.+|+.+|..+++ |...++
T Consensus 271 ~~~~~l~~l~~~~~--iPIa~gE-~~~~~~~~~~~i~~~a~dii~~d-~~~GGit~~~kia~lA~~~gv~v~~-h~~~~s 345 (455)
T 3n6h_A 271 SGREIMAEFRRRTG--IPTATNM-IATNWREMCHAIMLQSVDIPLAD-PHFWTLTGASRVAQLCNEWGLTWGC-HSNNHF 345 (455)
T ss_dssp CHHHHHHHHHHHHC--CCEEESS-SCSSHHHHHHHHHHTCCSEEBCC-HHHHCHHHHHHHHHHHHHTTCCCBC-CCCSCC
T ss_pred HHHHHHHHHHHCCC--CEEEECC-CEEEHHHHHHHHHCCCCCEEEEC-CCCCCHHHHHHHHHHHHHCCCEEEE-CCCCCC
T ss_conf 13689999985489--4286045-20101337877644456589856-1213569999999999986996997-689765
Q ss_pred CHHHHH--HHHHHH
Q ss_conf 235899--899981
Q gi|254780670|r 369 EDHTIA--DLAVAT 380 (424)
Q Consensus 369 eD~~ia--DLAVg~ 380 (424)
.=.+.+ |++.++
T Consensus 346 ~i~~aa~~hlaaa~ 359 (455)
T 3n6h_A 346 DISLAMFSHVGAAA 359 (455)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHC
T ss_conf 99999999999968