Query gi|254780670|ref|YP_003065083.1| phosphopyruvate hydratase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 424
No_of_seqs 163 out of 2152
Neff 5.6
Searched_HMMs 23785
Date Tue May 31 18:52:34 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780670.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w6t_A Enolase; bacterial infe 100.0 0 0 1242.7 39.0 423 1-423 11-441 (444)
2 2fym_A Enolase; RNA degradosom 100.0 0 0 1235.5 40.9 423 2-424 2-430 (431)
3 2ptz_A Enolase; lyase, glycoly 100.0 0 0 1208.0 37.5 416 1-419 4-430 (432)
4 2pa6_A Enolase; glycolysis, ly 100.0 0 0 1206.5 37.5 415 1-422 9-425 (427)
5 3otr_A Enolase; structural gen 100.0 0 0 1204.5 38.1 419 1-422 2-442 (452)
6 2akz_A Gamma enolase, neural; 100.0 0 0 1201.2 38.7 416 2-422 1-429 (439)
7 2al1_A Enolase 1, 2-phospho-D- 100.0 0 0 1203.2 36.8 417 2-423 1-433 (436)
8 1kcz_A Beta-methylaspartase; b 100.0 0 0 393.1 22.1 354 9-412 29-412 (413)
9 1kko_A 3-methylaspartate ammon 100.0 0 0 379.4 22.2 347 19-412 52-412 (413)
10 3dip_A Enolase; structural gen 99.9 1.9E-21 8.1E-26 177.5 22.5 329 1-382 4-341 (410)
11 2qjj_A Mandelate racemase/muco 99.9 6.5E-22 2.8E-26 180.9 9.1 309 1-382 1-334 (402)
12 2pod_A Mandelate racemase / mu 99.9 7.9E-19 3.3E-23 158.1 24.0 326 1-383 3-341 (410)
13 2ox4_A Putative mandelate race 99.9 9.9E-19 4.2E-23 157.4 23.6 318 1-381 3-336 (403)
14 1rvk_A Isomerase/lactonizing e 99.8 4.3E-18 1.8E-22 152.7 22.7 304 1-382 1-324 (382)
15 2o56_A Putative mandelate race 99.8 8.3E-18 3.5E-22 150.6 22.5 322 1-382 4-343 (407)
16 2pgw_A Muconate cycloisomerase 99.8 2.3E-17 9.7E-22 147.3 23.5 299 1-383 4-318 (384)
17 2poz_A Putative dehydratase; o 99.8 1.4E-17 6E-22 148.8 21.4 315 1-382 3-327 (392)
18 3gd6_A Muconate cycloisomerase 99.8 3.1E-16 1.3E-20 138.9 27.7 306 1-385 1-317 (391)
19 3dgb_A Muconate cycloisomerase 99.8 2E-16 8.6E-21 140.3 26.5 302 1-383 6-322 (382)
20 3fcp_A L-Ala-D/L-Glu epimerase 99.8 3.1E-16 1.3E-20 139.0 27.1 304 1-382 5-320 (381)
21 3gy1_A Mandelate racemase/muco 99.8 1.8E-16 7.7E-21 140.6 24.7 308 2-382 7-331 (408)
22 1nu5_A Chloromuconate cycloiso 99.8 7.7E-16 3.2E-20 136.0 27.8 305 1-385 1-318 (370)
23 3bsm_A Mandelate racemase/muco 99.8 1.6E-18 6.5E-23 156.0 13.4 310 1-384 3-339 (413)
24 3mwc_A Mandelate racemase/muco 99.8 3.8E-17 1.6E-21 145.7 19.4 305 1-378 7-329 (400)
25 3go2_A Putative L-alanine-DL-g 99.8 9.9E-17 4.2E-21 142.6 20.9 316 1-382 3-336 (409)
26 1chr_A Chloromuconate cycloiso 99.8 1.9E-16 7.9E-21 140.5 22.2 297 1-380 1-315 (370)
27 3i6e_A Muconate cycloisomerase 99.8 6.8E-16 2.9E-20 136.4 24.3 293 1-380 8-319 (385)
28 3jva_A Dipeptide epimerase; en 99.8 2.7E-15 1.2E-19 131.9 25.6 295 1-381 1-312 (354)
29 2gl5_A Putative dehydratase pr 99.8 1.3E-15 5.3E-20 134.4 23.1 317 1-382 3-344 (410)
30 3dg3_A Muconate cycloisomerase 99.8 5.4E-16 2.3E-20 137.2 20.3 279 1-365 1-295 (367)
31 1tkk_A Similar to chloromucona 99.7 2.4E-14 1E-18 125.0 28.3 300 1-381 1-315 (366)
32 3n4e_A Mandelate racemase/muco 99.7 3.5E-14 1.5E-18 123.8 28.0 307 1-381 3-315 (393)
33 3i4k_A Muconate lactonizing en 99.7 7E-14 3E-18 121.5 28.7 299 1-380 6-321 (383)
34 2oqh_A Putative isomerase; PSI 99.7 2.1E-15 8.9E-20 132.8 20.7 303 1-384 3-318 (385)
35 2og9_A Mandelate racemase/muco 99.7 7E-15 2.9E-19 128.9 23.3 296 1-381 13-329 (393)
36 3my9_A Muconate cycloisomerase 99.7 1E-15 4.3E-20 135.1 19.0 300 1-384 6-320 (377)
37 2qde_A Mandelate racemase/muco 99.7 1.2E-14 4.9E-19 127.3 24.4 296 1-380 3-316 (397)
38 2zad_A Muconate cycloisomerase 99.7 7.4E-15 3.1E-19 128.8 23.2 293 1-382 2-312 (345)
39 2hxt_A L-fuconate dehydratase; 99.7 3.3E-15 1.4E-19 131.3 20.2 315 2-380 3-368 (441)
40 3bjs_A Mandelate racemase/muco 99.7 6.7E-15 2.8E-19 129.1 21.2 298 1-381 39-357 (428)
41 3ekg_A Mandelate racemase/muco 99.7 8.7E-15 3.7E-19 128.2 21.7 275 18-380 59-333 (404)
42 2ppg_A Putative isomerase; str 99.7 9.3E-14 3.9E-18 120.6 26.8 300 1-381 5-338 (399)
43 3mqt_A Mandelate racemase/muco 99.7 3.7E-15 1.5E-19 131.0 19.5 315 2-381 6-328 (394)
44 2qgy_A Enolase from the enviro 99.7 8.8E-14 3.7E-18 120.8 26.2 300 1-381 8-322 (391)
45 3ik4_A Mandelate racemase/muco 99.7 6.4E-14 2.7E-18 121.8 25.3 295 1-381 5-316 (365)
46 2p8b_A Mandelate racemase/muco 99.7 2.9E-14 1.2E-18 124.4 23.3 299 1-383 1-314 (369)
47 3mkc_A Racemase; metabolic pro 99.7 1.3E-15 5.4E-20 134.4 15.6 318 2-386 11-339 (394)
48 2qq6_A Mandelate racemase/muco 99.7 3E-14 1.3E-18 124.3 22.5 314 2-380 7-336 (410)
49 1sjd_A N-acylamino acid racema 99.7 7.2E-14 3E-18 121.5 24.2 294 1-380 1-307 (368)
50 2pp0_A L-talarate/galactarate 99.7 1.6E-14 6.6E-19 126.3 20.2 282 1-362 26-328 (398)
51 3mzn_A Glucarate dehydratase; 99.7 3.1E-15 1.3E-19 131.5 16.6 314 2-380 6-356 (450)
52 3fxg_A Rhamnonate dehydratase; 99.7 2.8E-14 1.2E-18 124.5 21.2 274 17-381 64-339 (455)
53 2gdq_A YITF; mandelate racemas 99.7 1.6E-13 6.6E-18 118.9 24.7 291 1-381 4-310 (382)
54 3no1_A Isomerase, mandelate ra 99.7 2E-13 8.3E-18 118.2 24.9 301 1-383 22-336 (398)
55 1r0m_A N-acylamino acid racema 99.7 1.9E-13 8E-18 118.3 23.5 291 1-379 8-312 (375)
56 3h12_A Mandelate racemase; str 99.7 1.8E-13 7.7E-18 118.4 23.0 301 1-382 3-324 (397)
57 2ovl_A Putative racemase; stru 99.7 4.8E-13 2E-17 115.4 25.0 294 1-380 2-312 (371)
58 1mdl_A Mandelate racemase; iso 99.6 4.2E-13 1.8E-17 115.8 24.0 293 1-381 4-311 (359)
59 3cyj_A Mandelate racemase/muco 99.6 1.9E-13 7.8E-18 118.4 22.1 283 10-382 23-312 (372)
60 2nql_A AGR_PAT_674P, isomerase 99.6 8.8E-14 3.7E-18 120.8 20.4 300 1-385 3-337 (388)
61 3fv9_G Mandelate racemase/muco 99.6 9.3E-13 3.9E-17 113.2 25.4 301 1-384 3-323 (386)
62 3n6h_A Mandelate racemase/muco 99.6 7.8E-15 3.3E-19 128.6 14.1 315 2-380 10-359 (455)
63 2zc8_A N-acylamino acid racema 99.6 1.3E-12 5.6E-17 112.1 23.8 292 1-378 1-306 (369)
64 2hzg_A Mandelate racemase/muco 99.6 9.7E-15 4.1E-19 127.9 12.6 307 1-381 3-321 (401)
65 2qdd_A Mandelate racemase/muco 99.6 1.3E-12 5.4E-17 112.2 23.4 291 1-380 3-313 (378)
66 2p3z_A L-rhamnonate dehydratas 99.6 8E-14 3.4E-18 121.1 16.3 275 17-381 69-345 (415)
67 2rdx_A Mandelate racemase/muco 99.6 3.7E-12 1.6E-16 108.8 23.5 296 1-382 3-315 (379)
68 2ps2_A Putative mandelate race 99.6 1.1E-11 4.5E-16 105.4 25.6 293 1-381 4-316 (371)
69 2oz8_A MLL7089 protein; struct 99.6 4E-12 1.7E-16 108.6 23.4 293 1-382 3-312 (389)
70 3ddm_A Putative mandelate race 99.5 1.3E-12 5.4E-17 112.2 18.6 296 1-381 10-327 (392)
71 3eez_A Putative mandelate race 99.5 2E-11 8.2E-16 103.4 24.4 298 1-387 3-318 (378)
72 1ec7_A Glucarate dehydratase; 99.5 3.4E-12 1.4E-16 109.0 19.1 312 2-380 9-358 (446)
73 3n4f_A Mandelate racemase/muco 99.5 1E-11 4.3E-16 105.5 20.5 276 18-380 43-329 (392)
74 3p0w_A Mandelate racemase/muco 99.5 8.9E-13 3.8E-17 113.4 14.4 316 1-380 8-374 (470)
75 2pge_A MENC; OSBS, NYSGXRC, PS 99.5 2E-11 8.3E-16 103.4 19.7 289 11-380 20-337 (377)
76 2pmq_A Mandelate racemase/muco 99.5 1.3E-10 5.5E-15 97.3 23.3 294 1-381 3-314 (377)
77 1jpd_X L-Ala-D/L-Glu epimerase 99.4 8.7E-11 3.7E-15 98.7 20.7 266 2-369 3-283 (324)
78 1tzz_A Hypothetical protein L1 99.4 8E-11 3.4E-15 98.9 19.2 302 1-382 4-340 (392)
79 2okt_A OSB synthetase, O-succi 99.3 4.4E-10 1.8E-14 93.5 18.5 272 1-380 2-288 (342)
80 3ijl_A Muconate cycloisomerase 99.2 8.5E-09 3.6E-13 83.9 21.5 255 17-369 26-286 (338)
81 2ozt_A TLR1174 protein; struct 99.1 6.2E-09 2.6E-13 84.9 13.7 145 212-382 143-292 (332)
82 3caw_A O-succinylbenzoate synt 98.6 3E-05 1.3E-09 57.6 18.8 240 17-382 26-272 (330)
83 1r6w_A OSB synthase, O-succiny 98.3 1.2E-05 5.1E-10 60.6 11.0 144 212-384 140-287 (322)
84 2opj_A O-succinylbenzoate-COA 98.1 0.0001 4.2E-09 53.8 12.2 124 232-381 122-247 (327)
85 1wuf_A Hypothetical protein LI 97.2 0.0065 2.7E-07 40.4 11.0 275 43-395 65-341 (393)
86 1wue_A Mandelate racemase/muco 95.0 0.23 9.6E-06 29.0 10.0 266 57-395 75-341 (386)
87 3fs2_A 2-dehydro-3-deoxyphosph 85.9 1.9 7.9E-05 22.2 10.1 98 261-366 95-193 (298)
88 1b5p_A Protein (aspartate amin 82.1 2.7 0.00011 21.1 13.6 30 257-287 177-206 (385)
89 3knz_A Putative sugar binding 78.0 2.3 9.7E-05 21.6 4.1 35 276-311 272-306 (366)
90 2poc_A D-fructose-6-, isomeras 77.9 1.9 7.9E-05 22.2 3.7 11 111-121 59-69 (367)
91 1moq_A Glucosamine 6-phosphate 73.5 3.8 0.00016 19.9 4.3 11 111-121 61-71 (368)
92 1zco_A 2-dehydro-3-deoxyphosph 72.9 4.7 0.0002 19.2 13.1 93 264-364 73-166 (262)
93 3m9w_A D-xylose-binding peripl 72.5 4.8 0.0002 19.2 5.9 77 262-341 170-249 (313)
94 2zj3_A Glucosamine--fructose-6 71.7 3.4 0.00014 20.3 3.7 29 332-361 284-312 (375)
95 3h7i_A Ribonuclease H, RNAse H 70.3 2.8 0.00012 21.0 3.0 77 234-311 65-155 (305)
96 3fxa_A SIS domain protein; YP_ 69.0 5 0.00021 19.1 4.0 53 330-382 93-145 (201)
97 1j32_A Aspartate aminotransfer 68.5 5.8 0.00024 18.6 13.5 28 258-286 177-204 (388)
98 2wqp_A Polysialic acid capsule 68.3 5.9 0.00025 18.6 11.5 93 259-361 86-179 (349)
99 3g68_A Putative phosphosugar i 68.1 4.9 0.00021 19.1 3.9 13 197-209 132-144 (352)
100 1a0c_A Xylose isomerase; ketol 65.6 6.6 0.00028 18.2 5.3 211 159-379 98-359 (438)
101 2ddz_A 190AA long hypothetical 63.9 2.4 0.0001 21.4 1.6 93 240-334 24-134 (190)
102 2bpl_A Glucosamine--fructose-6 63.7 2.8 0.00012 20.9 1.9 55 329-383 339-394 (608)
103 3hba_A Putative phosphosugar i 63.3 2.3 9.5E-05 21.6 1.4 31 345-376 269-300 (334)
104 3eua_A Putative fructose-amino 62.2 2.6 0.00011 21.2 1.5 31 331-362 246-276 (329)
105 3ivs_A Homocitrate synthase, m 60.9 7.9 0.00033 17.6 9.3 36 305-340 311-346 (423)
106 1tzb_A Glucose-6-phosphate iso 59.6 8.3 0.00035 17.4 4.0 20 267-286 171-190 (302)
107 1gd9_A Aspartate aminotransfer 57.5 8.9 0.00038 17.2 11.1 32 257-289 173-204 (389)
108 3fkj_A Putative phosphosugar i 57.0 2 8.2E-05 22.1 0.2 21 61-81 19-39 (347)
109 2dou_A Probable N-succinyldiam 55.6 9.5 0.0004 17.0 11.1 29 257-286 171-199 (376)
110 1o2d_A Alcohol dehydrogenase, 55.6 9.6 0.0004 17.0 4.0 55 85-145 84-144 (371)
111 3fj1_A Putative phosphosugar i 55.2 3.5 0.00015 20.2 1.2 30 331-361 257-286 (344)
112 3d4u_A Tafia, carboxypeptidase 54.3 10 0.00042 16.8 3.4 13 61-73 73-85 (309)
113 3nft_A Translocator protein BI 54.1 10 0.00042 16.8 11.4 115 195-323 106-231 (303)
114 3d02_A Putative LACI-type tran 53.9 10 0.00043 16.8 6.4 81 260-344 170-253 (303)
115 3ksm_A ABC-type sugar transpor 53.0 10 0.00044 16.7 5.6 76 261-343 169-250 (276)
116 2kw6_A Cyclin-dependent kinase 51.4 4 0.00017 19.8 1.0 23 396-418 10-34 (65)
117 2h3h_A Sugar ABC transporter, 50.6 11 0.00048 16.4 4.7 77 261-342 164-244 (313)
118 2zxd_A Alpha-L-fucosidase, put 49.5 12 0.0005 16.3 6.7 74 214-289 151-230 (455)
119 3fdb_A Beta C-S lyase, putativ 49.0 12 0.0005 16.3 12.4 28 258-286 164-191 (377)
120 8abp_A L-arabinose-binding pro 49.0 12 0.0005 16.3 5.1 79 260-342 176-262 (306)
121 2a3n_A Putative glucosamine-fr 46.7 5 0.00021 19.0 0.9 31 330-362 270-301 (355)
122 2qf7_A Pyruvate carboxylase pr 46.7 12 0.00052 16.2 2.9 34 58-92 419-453 (1165)
123 3i0z_A Putative tagatose-6-pho 46.4 11 0.00045 16.6 2.6 38 83-121 38-75 (389)
124 1gud_A ALBP, D-allose-binding 45.6 13 0.00056 15.9 4.9 77 260-340 174-253 (288)
125 1wek_A Hypothetical protein TT 44.7 14 0.00058 15.8 3.6 29 327-355 130-158 (217)
126 3kax_A Aminotransferase, class 44.2 14 0.00059 15.7 9.2 29 258-287 170-198 (383)
127 1jq5_A Glycerol dehydrogenase; 42.4 15 0.00063 15.5 5.3 26 105-130 86-115 (370)
128 3nvt_A 3-deoxy-D-arabino-heptu 41.8 15 0.00064 15.5 12.5 267 80-387 67-347 (385)
129 3fok_A Uncharacterized protein 41.6 15 0.00064 15.5 4.8 88 336-423 156-279 (307)
130 2aml_A SIS domain protein; 469 41.6 15 0.00064 15.5 2.9 11 111-121 59-69 (373)
131 3doj_A AT3G25530, dehydrogenas 40.8 16 0.00066 15.4 5.1 94 249-358 107-218 (310)
132 1mp9_A Tata-binding protein; t 40.2 16 0.00068 15.3 2.8 128 140-292 56-197 (198)
133 3jzd_A Iron-containing alcohol 39.9 16 0.00068 15.3 5.5 26 105-130 89-118 (358)
134 1j5x_A Glucosamine-6-phosphate 38.3 17 0.00072 15.1 3.6 22 346-367 277-298 (342)
135 3gza_A Putative alpha-L-fucosi 37.2 13 0.00053 16.1 1.8 192 214-412 108-343 (443)
136 1t35_A Hypothetical protein YV 37.2 14 0.00058 15.8 1.9 16 163-178 101-116 (191)
137 3c3j_A Putative tagatose-6-pho 36.9 18 0.00075 15.0 3.2 16 84-99 37-52 (384)
138 1ht6_A AMY1, alpha-amylase iso 36.0 18 0.00078 14.9 3.6 14 276-289 318-331 (405)
139 3gh1_A Predicted nucleotide-bi 35.7 19 0.00079 14.8 3.0 27 327-353 246-272 (462)
140 1ydh_A AT5G11950; structural g 34.9 19 0.00081 14.7 3.5 20 162-181 108-127 (216)
141 2h78_A Hibadh, 3-hydroxyisobut 34.3 20 0.00082 14.7 4.8 50 260-310 98-165 (302)
142 1rrm_A Lactaldehyde reductase; 33.6 20 0.00084 14.6 4.9 45 104-148 87-139 (386)
143 3hl0_A Maleylacetate reductase 32.9 21 0.00086 14.5 5.6 25 105-129 87-115 (353)
144 1ysj_A Protein YXEP; M20 famil 31.7 22 0.0009 14.4 6.2 36 264-302 322-359 (404)
145 3g8r_A Probable spore coat pol 31.6 22 0.00091 14.4 10.3 190 212-412 19-262 (350)
146 1r30_A Biotin synthase; SAM ra 31.3 22 0.00092 14.3 5.1 70 336-411 257-333 (369)
147 2ajr_A Sugar kinase, PFKB fami 30.8 22 0.00093 14.3 11.4 24 4-27 7-30 (331)
148 1mio_B Nitrogenase molybdenum 30.8 22 0.00093 14.3 4.7 89 291-391 324-413 (458)
149 3b46_A Aminotransferase BNA3; 30.5 22 0.00094 14.2 11.8 29 258-287 215-243 (447)
150 3brs_A Periplasmic binding pro 30.5 22 0.00094 14.2 4.4 78 261-341 172-251 (289)
151 3iix_A Biotin synthetase, puta 30.2 23 0.00095 14.2 11.0 49 339-388 243-293 (348)
152 2a33_A Hypothetical protein; s 30.1 23 0.00096 14.2 3.9 19 162-180 112-130 (215)
153 3jrn_A AT1G72930 protein; TIR 28.4 10 0.00043 16.8 0.1 54 185-246 26-79 (176)
154 1weh_A Conserved hypothetical 28.2 24 0.001 14.0 3.1 23 329-351 98-120 (171)
155 3lwf_A LIN1550 protein, putati 27.4 13 0.00057 15.9 0.5 56 171-226 48-104 (159)
156 2v82_A 2-dehydro-3-deoxy-6-pho 26.7 26 0.0011 13.8 10.6 44 268-315 136-182 (212)
157 1d2f_A MALY protein; aminotran 26.0 27 0.0011 13.7 11.7 29 258-287 176-204 (390)
158 2ivn_A O-sialoglycoprotein end 25.0 28 0.0012 13.6 3.6 84 63-154 45-134 (330)
159 3cky_A 2-hydroxymethyl glutara 24.8 28 0.0012 13.5 5.1 23 287-309 143-165 (301)
160 2ijr_A Hypothetical protein AP 23.8 16 0.00069 15.3 0.4 76 111-186 15-108 (300)
161 1xd7_A YWNA; structural genomi 23.7 29 0.0012 13.4 1.7 57 169-225 25-81 (145)
162 3g13_A Putative conjugative tr 23.2 30 0.0013 13.3 9.7 131 261-419 23-161 (169)
163 2z61_A Probable aspartate amin 23.0 30 0.0013 13.3 12.0 14 349-362 322-335 (370)
164 1obr_A Carboxypeptidase T; hyd 22.5 31 0.0013 13.2 3.4 11 61-71 75-85 (326)
165 3mfn_A Uncharacterized protein 22.5 28 0.0012 13.6 1.4 51 156-212 15-65 (157)
166 2gak_A Beta-1,6-N-acetylglucos 22.3 31 0.0013 13.2 4.1 16 259-274 185-200 (391)
167 2gf2_A Hibadh, 3-hydroxyisobut 22.2 31 0.0013 13.2 5.9 94 249-358 86-197 (296)
168 1w25_A Stalked-cell differenti 22.1 31 0.0013 13.2 3.0 57 261-327 297-360 (459)
169 1c7n_A Cystalysin; transferase 21.9 32 0.0013 13.1 11.0 29 258-287 178-206 (399)
170 2gey_A ACLR protein; alpha+bet 21.8 32 0.0013 13.1 3.4 68 212-291 5-74 (158)
171 1xi9_A Putative transaminase; 21.5 32 0.0013 13.1 9.6 29 258-287 188-216 (406)
172 2qv5_A AGR_C_5032P, uncharacte 21.3 32 0.0014 13.1 6.1 30 341-370 195-225 (261)
173 2qkf_A 3-deoxy-D-manno-octulos 21.1 33 0.0014 13.0 11.3 111 247-365 55-166 (280)
174 3bq9_A Predicted rossmann fold 21.0 33 0.0014 13.0 3.0 25 329-353 246-270 (460)
175 1hjr_A Holliday junction resol 20.6 33 0.0014 13.0 3.0 24 266-289 47-72 (158)
176 1yb4_A Tartronic semialdehyde 20.4 34 0.0014 12.9 5.6 50 260-310 97-164 (295)
177 1o4s_A Aspartate aminotransfer 20.2 34 0.0014 12.9 11.0 29 258-287 188-216 (389)
No 1
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=100.00 E-value=0 Score=1242.71 Aligned_cols=423 Identities=57% Similarity=0.939 Sum_probs=415.1
Q ss_pred CE-EEEEEEEEEEECCCCCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCC-CCCCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 91-0589986886079784299999984897676634478664775467626898-651680489999999875678975
Q gi|254780670|r 1 MF-INDIIAREVIDSRGSPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQE-KRYFGKGVLKAIAFVNDEIRTALL 78 (424)
Q Consensus 1 m~-I~~i~~r~IlDSRG~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~-~~~~G~gV~~Av~~in~~i~~~L~ 78 (424)
|. |++|++||||||||||||||||+|++|.+||++||||||||+|||+||||++ ++|+||||.+||++||++|+|+|+
T Consensus 11 M~~I~~i~ar~IlDSRG~PTVEvev~~~~g~~gra~~PSGAStG~~EA~elrD~~~~ry~GkgV~~Av~~in~~I~~~Li 90 (444)
T 1w6t_A 11 MSIITDVYAREVLDSRGNPTLEVEVYTESGAFGRGMVPSGASTGEHEAVELRDGDKSRYGGLGTQKAVDNVNNIIAEAII 90 (444)
T ss_dssp TTBEEEEEEEEEECTTSCEEEEEEEEETTCCEEEEECCCC---CCSSCCCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHT
T ss_pred CCCCCEEEEEEEECCCCCEEEEEEEEECCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 76513689999987999805999999899988999733787888765201147983103685599999999999899986
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCCCCC
Q ss_conf 98855789888646530366432212322220244899875266349848882253245647543000003664556776
Q gi|254780670|r 79 GCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNILNGGIHADNAL 158 (424)
Q Consensus 79 g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~NiinGG~HA~~~l 158 (424)
|+++.||.+||++|++||||+||+++|||+++|||||+|||+|+.+++|||+|+++...+.||+||+||||||+||+|++
T Consensus 91 G~~~~dQ~~ID~~LielDgT~nks~lGaNailAvSlA~a~AaA~~~~~pLy~yl~~~~~~~lP~P~~NIinGG~HA~n~l 170 (444)
T 1w6t_A 91 GYDVRDQQAIDRAMIALDGTPNKGKLGANAILGVSIAVARAAADYLEIPLYSYLGGFNTKVLPTPMMNIINGGSHSDAPI 170 (444)
T ss_dssp TSBTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHHTSCHHHHHHCTTCCEECEECEEEEECGGGCSSSC
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCEEEEECCCCCCCCCC
T ss_conf 99867688877999973599431125630367889999999886349875332068776548854489723613367665
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHH
Q ss_conf 61025651488774899989999999999987520000136765576448868468999999999975385311102343
Q gi|254780670|r 159 DFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYSTNVGDEGGFSPNLKTADSALDLIANSIEKAGYNAGKDLLIA 238 (424)
Q Consensus 159 ~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t~vgDEGGfap~~~~~eeaL~ll~eAi~~aGy~~g~di~i~ 238 (424)
|||||||+|.++.||+|+|+|++||||+||++|++++++|+|||||||+|++++++++|++|.+||+++||+||+||+||
T Consensus 171 diQEfmIiP~ga~sf~eal~~~~eV~~~lk~~L~~~g~~t~vgDEGGfaP~~~s~eeaL~li~eAI~~aGy~~G~di~ia 250 (444)
T 1w6t_A 171 AFQEFMILPVGAPTFKEALRYGAEIFHALKKILKSRGLETAVGDEGGFAPRFEGTEDGVETILAAIEAAGYVPGKDVFLG 250 (444)
T ss_dssp CCSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHTTCCCCBCTTSCBCCCCSSHHHHHHHHHHHHHHTTCCBTTTBEEE
T ss_pred CHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEE
T ss_conf 64566328999998899999899999999999985699876487868599999989999999999998288878716886
Q ss_pred HCHHHHHHCCCCCEEECC------CCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCE
Q ss_conf 110465320278511114------68656878999999987654486997767631042379988642388368504300
Q gi|254780670|r 239 LDCAASAFFKKEKYILKG------ENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQLVGDDL 312 (424)
Q Consensus 239 lD~AAsefy~~~kY~~~~------~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~IvGDDL 312 (424)
|||||||||+++||.|.+ .+..+|++||+|||.+|+++|||+||||||+|+||+||++||+++|++||||||||
T Consensus 251 lD~AAsefy~~~k~~y~~~~~~~~~~~~~s~~elid~y~~l~~~yPIisIEDp~~e~D~~gw~~lt~~lg~~~~ivGDDL 330 (444)
T 1w6t_A 251 FDCASSEFYDKERKVYDYTKFEGEGAAVRTSAEQIDYLEELVNKYPIITIEDGMDENDWDGWKALTERLGKKVQLVGDDF 330 (444)
T ss_dssp EECCGGGGBC--CCCEETHHHHCTTCCEECHHHHHHHHHHHHHHSCEEEEESCSCTTCHHHHHHHHHHHTTTSEEEESTT
T ss_pred ECHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHCCEEEEECCCC
T ss_conf 20426766426775110322367875402899999999999966887799768874340249999998588058866611
Q ss_pred EECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHEECCCCH
Q ss_conf 00214888521003865223425453003899999999999879869995078887235899899981998010075611
Q gi|254780670|r 313 FVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVATNCGQIKTGSLAR 392 (424)
Q Consensus 313 ~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~~a~~iK~G~~~R 392 (424)
||||++||++||++++||++|||||||||||||+|++++|+++||.+|||||||||||+||||||||+||+|||+|+|+|
T Consensus 331 ~vTn~~rl~~gi~~~~~nailiK~NQiGTvset~eai~la~~~g~~~ivShRSGETeD~~iaDLAVg~ga~~iK~G~~~R 410 (444)
T 1w6t_A 331 FVTNTDYLARGIQEGAANSILIKVNQIGTLTETFEAIEMAKEAGYTAVVSHRSGETEDSTIADIAVATNAGQIKTGSLSR 410 (444)
T ss_dssp TTTCHHHHHHHHHHTCCSEEEECHHHHCSHHHHHHHHHHHHHTTCEEEEECCSSCCSCCHHHHHHHHTTCCEEECCCSSS
T ss_pred CCCCCHHHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHCCCEEEECCCCC
T ss_conf 13571376601133554264023323222999999999999869879997898876510599999870898033079851
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCHHHHCC
Q ss_conf 4489999999999998311045576253047
Q gi|254780670|r 393 SDRIAKYNQLIRIEESLGKQAKFAGRSILIH 423 (424)
Q Consensus 393 ~ER~aKyNrLlrIee~Lg~~a~~~g~~~~~~ 423 (424)
|||++||||||||||+||++++|+|+++|.+
T Consensus 411 ~ER~aKyNrLlrIee~L~~~~~~~g~~~f~~ 441 (444)
T 1w6t_A 411 TDRIAKYNQLLRIEDQLGEVAEYRGLKSFYN 441 (444)
T ss_dssp HHHHHHHHHHHHHHHHHGGGCEECGGGGCTT
T ss_pred HHHHHHHHHHHHHHHHHCCCCEECCHHHHCC
T ss_conf 7889999999999998563547576556236
No 2
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=100.00 E-value=0 Score=1235.55 Aligned_cols=423 Identities=59% Similarity=0.914 Sum_probs=414.9
Q ss_pred EEEEEEEEEEEECCCCCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCC-CCCCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf 105899868860797842999999848976766344786647754676268986-5168048999999987567897598
Q gi|254780670|r 2 FINDIIAREVIDSRGSPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEK-RYFGKGVLKAIAFVNDEIRTALLGC 80 (424)
Q Consensus 2 ~I~~i~~r~IlDSRG~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~-~~~G~gV~~Av~~in~~i~~~L~g~ 80 (424)
+|++|+|||||||||||||||||+|++|.+||++||||||||+|||+||||+++ +|+||||.+||++||++|+|+|+|+
T Consensus 2 kI~~v~~r~IlDSRG~PTvEvev~~~~g~~gra~~PsGaStG~~Ea~elrD~~~~~~~GkgV~~Av~~vn~~i~~~L~g~ 81 (431)
T 2fym_A 2 KIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGK 81 (431)
T ss_dssp BEEEEEEEEEECTTSCEEEEEEEEETTSCEEEEECCCCCSSCSSSCCCCCCCCTTSGGGTCCHHHHHHHHTHHHHHHTTS
T ss_pred EEEEEEEEEEECCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 56799989997689982599999988997899966477778853654505699532577469999999999999998699
Q ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCC----CCCCCCCCCCEEECCCCCCCCC
Q ss_conf 855789888646530366432212322220244899875266349848882253----2456475430000036645567
Q gi|254780670|r 81 DARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGG----CSAHILPVPLMNILNGGIHADN 156 (424)
Q Consensus 81 ~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~----~~~~~lP~P~~NiinGG~HA~~ 156 (424)
+++||++||++|++||||+||+++|||+|+|||||+|||+|+.+++|||+||++ ...+.||+|||||||||+||+|
T Consensus 82 ~~~dQ~~iD~~L~elDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~~~~~~~~lPvP~~NiinGG~HA~~ 161 (431)
T 2fym_A 82 DAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADN 161 (431)
T ss_dssp BTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHTTCTTCCCCCEECEEEEECGGGSSS
T ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCC
T ss_conf 86787888799997427545444574225654099886554313896899987642677762237331576416445788
Q ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHH
Q ss_conf 76610256514887748999899999999999875200001367655764488684689999999999753853111023
Q gi|254780670|r 157 ALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYSTNVGDEGGFSPNLKTADSALDLIANSIEKAGYNAGKDLL 236 (424)
Q Consensus 157 ~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t~vgDEGGfap~~~~~eeaL~ll~eAi~~aGy~~g~di~ 236 (424)
+++||||||+|.++.||+|+|+|++||||+||++|++++++|+|||||||+|++++++++|++|++||+++||+||+||+
T Consensus 162 ~ld~QEfmI~P~ga~sf~eal~~~~evy~~lk~~L~~~g~~t~vgDEGGfap~~~~~eeaL~ll~eAi~~aGy~~g~di~ 241 (431)
T 2fym_A 162 NVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDIT 241 (431)
T ss_dssp SCCSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHTTCCCCBCTTSCBCCCCSSHHHHHHHHHHHHHHTTCCBTTTBE
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEE
T ss_conf 76602588715899899999999999999999999756998774777785899856299999999999983898677278
Q ss_pred HHHCHHHHHHCCCCCEEECCCC-CCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCEEEC
Q ss_conf 4311046532027851111468-656878999999987654486997767631042379988642388368504300002
Q gi|254780670|r 237 IALDCAASAFFKKEKYILKGEN-LELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQLVGDDLFVT 315 (424)
Q Consensus 237 i~lD~AAsefy~~~kY~~~~~~-~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~IvGDDL~vT 315 (424)
|+|||||||||++++|.|..++ ..+|++||++||.+|+++|||+||||||+||||+||++||+++|++|||||||||||
T Consensus 242 ialD~AAsefy~~~~y~~~~~~~~~~s~~eli~~y~~l~~~yPIisIEDp~~e~D~~gw~~lt~~lg~~~~iVGDDl~~T 321 (431)
T 2fym_A 242 LAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVT 321 (431)
T ss_dssp EEEECCGGGGEETTEEEEGGGTTEEECHHHHHHHHHHHHHHSCEEEEESCSCTTCHHHHHHHHHHHTTTSEEEESTTTTT
T ss_pred EEEHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEECCHHCCC
T ss_conf 75102134430366623516788203899999999999851987898479872456689999997388079988601024
Q ss_pred CHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHEECCCCHHHH
Q ss_conf 14888521003865223425453003899999999999879869995078887235899899981998010075611448
Q gi|254780670|r 316 NPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVATNCGQIKTGSLARSDR 395 (424)
Q Consensus 316 n~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~~a~~iK~G~~~R~ER 395 (424)
|++||++||++++||++|||||||||||||+|++++|+++||.+|||||||||||+||||||||++|+|||+|+|+||||
T Consensus 322 n~~rl~~gi~~~~~nailiK~NQiGTvset~ea~~la~~~g~~~ivShRsGETeD~~iadLAVg~ga~~iK~G~~~R~ER 401 (431)
T 2fym_A 322 NTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDR 401 (431)
T ss_dssp CHHHHHHHHHTTCCSEEEECGGGTCSHHHHHHHHHHHHHTTCEEEEECCSSCCSCCHHHHHHHHTTCEEEECCCSCSHHH
T ss_pred CHHHHHHHHHCCCCCHHEECCCCCEEHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHCCCCEEECCCCCHHH
T ss_conf 45899987631676022223433223999999999999879879997898886521599999870898244079851788
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHCCC
Q ss_conf 99999999999983110455762530479
Q gi|254780670|r 396 IAKYNQLIRIEESLGKQAKFAGRSILIHQ 424 (424)
Q Consensus 396 ~aKyNrLlrIee~Lg~~a~~~g~~~~~~~ 424 (424)
++||||||||||+||+.++|+|+++|+.|
T Consensus 402 ~aKyNrLlrIee~Lg~~~~~~g~~~~~~~ 430 (431)
T 2fym_A 402 VAKYNQLIRIEEALGEKAPYNGRKEIKGQ 430 (431)
T ss_dssp HHHHHHHHHHHHHHGGGSCCCGGGGSTTC
T ss_pred HHHHHHHHHHHHHHCCCCEECCHHHHCCC
T ss_conf 99999999999985646741885662569
No 3
>2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A
Probab=100.00 E-value=0 Score=1207.95 Aligned_cols=416 Identities=49% Similarity=0.761 Sum_probs=401.8
Q ss_pred CEEEEEEEEEEEECCCCCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCC-CCCCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 910589986886079784299999984897676634478664775467626898-6516804899999998756789759
Q gi|254780670|r 1 MFINDIIAREVIDSRGSPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQE-KRYFGKGVLKAIAFVNDEIRTALLG 79 (424)
Q Consensus 1 m~I~~i~~r~IlDSRG~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~-~~~~G~gV~~Av~~in~~i~~~L~g 79 (424)
|+|++|++||||||||||||||||++++| .+|++||||||||+|||+||||++ ++|+||||.+||++||+.|+|+|+|
T Consensus 4 m~I~~i~~r~IlDSRG~PTVEvev~~~~g-~~ra~vPSGAStG~~Ea~elrD~~~~~y~GkgV~~Av~~vn~~i~~~L~G 82 (432)
T 2ptz_A 4 MTIQKVHGREVLDSRGNPTVEVEVTTEKG-VFRSAVPSGASTGVYEACELRDGDKKRYVGKGCLQAVKNVNEVIGPALIG 82 (432)
T ss_dssp TSCCEEEEEEEECTTSCEEEEEEEEETTE-EEEEECCBCSSCCTTSCCCCCCCCTTTGGGTCCHHHHHHHHHTHHHHHTT
T ss_pred CEEEEEEEEEEECCCCCEEEEEEEEECCC-CEEEECCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 37989999999869998079999997899-87887147878775462011579964568700999999999999999869
Q ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHC---CCCCCCCCCCCCEEECCCCCCCCC
Q ss_conf 88557898886465303664322123222202448998752663498488822---532456475430000036645567
Q gi|254780670|r 80 CDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYL---GGCSAHILPVPLMNILNGGIHADN 156 (424)
Q Consensus 80 ~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl---~~~~~~~lP~P~~NiinGG~HA~~ 156 (424)
++++||.+||++|++||||+||+++|||+|+|||||+|||+|+.+++|||+|| ++...++||+|||||||||+||+|
T Consensus 83 ~~~~dQ~~iD~~L~~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~~~~~~~lPvPm~NIinGG~HA~~ 162 (432)
T 2ptz_A 83 RDELKQEELDTLMLRLDGTPNKGKLGANAILGCSMAISKAAAAAKGVPLYRYLASLAGTKELRLPVPCFNVINGGKHAGN 162 (432)
T ss_dssp CCTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHTCSCCEECEEEEEEEECSTTSSS
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCC
T ss_conf 97555587899999962996433457632068789999866543289677756664388664246330466136466898
Q ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 76610256514887748999899999999999875200--0013676557644886846899999999997538531110
Q gi|254780670|r 157 ALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSK--GYSTNVGDEGGFSPNLKTADSALDLIANSIEKAGYNAGKD 234 (424)
Q Consensus 157 ~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~--g~~t~vgDEGGfap~~~~~eeaL~ll~eAi~~aGy~~g~d 234 (424)
++|||||||+|.++.||+|+|+|++||||+||++|+++ +.+|+|||||||+|++++++++|++|++||+.+||++ +
T Consensus 163 ~ldiQEfmI~P~ga~sf~eal~~~~eVy~~lk~iL~~k~~~~~~~vgDEGGfap~~~~~eeaL~ll~~Ai~~aGy~~--~ 240 (432)
T 2ptz_A 163 ALPFQEFMIAPVKATSFSEALRMGSEVYHSLRGIIKKKYGQDAVNVGDEGGFAPPIKDINEPLPILMEAIEEAGHRG--K 240 (432)
T ss_dssp SCCSCEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGCCBCTTSSBCCSCCCTTTHHHHHHHHHHHTTCTT--S
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC--C
T ss_conf 87756899836999999999999999999999998630576654105677849998883999999999999738887--7
Q ss_pred HHHHHCHHHHHHCCCCCEEECC-----CCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEC
Q ss_conf 2343110465320278511114-----68656878999999987654486997767631042379988642388368504
Q gi|254780670|r 235 LLIALDCAASAFFKKEKYILKG-----ENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQLVG 309 (424)
Q Consensus 235 i~i~lD~AAsefy~~~kY~~~~-----~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~IvG 309 (424)
+.|+|||||||||++++|.|++ ++..+|++||++||.+|+++|||+||||||+|+||+||++||+++|++|||||
T Consensus 241 v~ialD~AAsefy~~~~~~Y~~~~~~~~~~~~s~~eli~~y~~l~~~yPIisIEDp~~e~D~~gw~~lt~~~g~~~~iVG 320 (432)
T 2ptz_A 241 FAICMDCAASETYDEKKQQYNLTFKSPEPTWVTAEQLRETYCKWAHDYPIVSIEDPYDQDDFAGFAGITEALKGKTQIVG 320 (432)
T ss_dssp CEEEEECCGGGGEETTTTEEETTTTSSSCCEECHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHHTTTTSEEEE
T ss_pred CEEEECHHHHHHHHHCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 40431055787644105622321136887540199999999997413986899778873537999999997399889956
Q ss_pred CCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHEECC
Q ss_conf 30000214888521003865223425453003899999999999879869995078887235899899981998010075
Q gi|254780670|r 310 DDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVATNCGQIKTGS 389 (424)
Q Consensus 310 DDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~~a~~iK~G~ 389 (424)
|||||||++||++||++++||++|||||||||||||+|++++|+++||.+|||||||||||+||||||||++|+|||+|+
T Consensus 321 DDl~vTn~~rl~~gi~~~~~NaiLiK~NQiGTvset~ea~~la~~~g~~~ivShRSGETeD~~iaDLAVg~ga~~iK~G~ 400 (432)
T 2ptz_A 321 DDLTVTNTERIKMAIEKKACNSLLLKINQIGTISEAIASSKLCMENGWSVMVSHRSGETEDTYIADLVVALGSGQIKTGA 400 (432)
T ss_dssp STTTTTCHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEECCSBCCSCCHHHHHHHHHTCSEEECCS
T ss_pred CHHCCCHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHCCCEEECCC
T ss_conf 33000108999863315776512771112222999999999999879879974898876630499999870898134179
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCCHH
Q ss_conf 611448999999999999831104557625
Q gi|254780670|r 390 LARSDRIAKYNQLIRIEESLGKQAKFAGRS 419 (424)
Q Consensus 390 ~~R~ER~aKyNrLlrIee~Lg~~a~~~g~~ 419 (424)
|+||||+||||||||||||||++++|++..
T Consensus 401 p~r~ER~aKyNrLlrIeeeLg~~~~~~~~~ 430 (432)
T 2ptz_A 401 PCRGERTAKLNQLLRIEEELGAHAKFGFPG 430 (432)
T ss_dssp SCSHHHHHHHHHHHHHHHHHCTTCEESCGG
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCCEECCCC
T ss_conf 841677999999999999862255806999
No 4
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural genomics, NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=0 Score=1206.51 Aligned_cols=415 Identities=60% Similarity=0.918 Sum_probs=406.0
Q ss_pred CEEEEEEEEEEEECCCCCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf 91058998688607978429999998489767663447866477546762689865168048999999987567897598
Q gi|254780670|r 1 MFINDIIAREVIDSRGSPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAFVNDEIRTALLGC 80 (424)
Q Consensus 1 m~I~~i~~r~IlDSRG~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~in~~i~~~L~g~ 80 (424)
|+|++|++||||||||+|||||||+|++|.++|++||||||||+|||+||||++++|+||||.+||++||+.|+|+|+|+
T Consensus 9 ~~I~~v~~r~IlDSRG~PTVEvev~~~~~~~~ra~vPSGaStG~~Ea~elrD~~~~~~gkgV~~Av~~vn~~I~~~L~g~ 88 (427)
T 2pa6_A 9 FEIKDIVAREVIDSRGNPTVEVEVITKGNGYGSAIVPSGASTGTHEALELRDKEKRFGGKGVLMAVENVNSIIRPEILGY 88 (427)
T ss_dssp GBEEEEEEEEEECTTSCEEEEEEEEETTCCEEEEECCCCCSSCSSSCCCCCCCSSGGGGTCCHHHHHHHHHTHHHHHTTC
T ss_pred CEEEEEEEEEEECCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 65748999999868998169999998999879996237877787700133789845577559999999999999998599
Q ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCC
Q ss_conf 85578988864653036643221232222024489987526634984888225324564754300000366455677661
Q gi|254780670|r 81 DARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNILNGGIHADNALDF 160 (424)
Q Consensus 81 ~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~NiinGG~HA~~~l~i 160 (424)
+++||.+||++|++||||+|||++|||+|+|||||+|||+|+.+++|||+||++...+.||+||+||||||+||+|++||
T Consensus 89 ~~~dQ~~iD~~L~elDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~~l~~~~~~~lP~P~~NiinGG~Ha~n~ldi 168 (427)
T 2pa6_A 89 DARMQREIDTIMIELDGTPNKSRLGANAILAVSLAVAKAAAATAKIPLYKYLGGFNSYVMPVPMMNVINGGKHAGNDLDL 168 (427)
T ss_dssp BTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHHTCCHHHHHHCSCCCEECEECEEEEECSTTTSSSCSS
T ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCH
T ss_conf 85646650098985258644445676442036899999988860997056554137866674505763265457887662
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHH
Q ss_conf 0256514887748999899999999999875200--00136765576448868468999999999975385311102343
Q gi|254780670|r 161 QEFMIMPVGAENIREAIRMGAEVFHTLKKELKSK--GYSTNVGDEGGFSPNLKTADSALDLIANSIEKAGYNAGKDLLIA 238 (424)
Q Consensus 161 QEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~--g~~t~vgDEGGfap~~~~~eeaL~ll~eAi~~aGy~~g~di~i~ 238 (424)
|||||+|.|+.||+|+++|++||||+||++|+++ +.+|+|||||||+|+++++|++|++|++||+++||+ +||.|+
T Consensus 169 QEfmIiP~ga~sf~eal~~~~eV~~~lk~~l~~k~g~~~~~vgDEGGfap~~~~~eeaL~li~~Ai~~aG~~--~dv~i~ 246 (427)
T 2pa6_A 169 QEFMIMPVGATSISEAVRMGSEVYHVLKNVILEKYGKNAVNVGDEGGFAPPLKTSREALDLLTESVKKAGYE--DEVVFA 246 (427)
T ss_dssp SEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCTTSCCBCTTSCBCCSCCSHHHHHHHHHHHHHHHTCT--TTCEEE
T ss_pred HHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC--CCEEEE
T ss_conf 232663688898999999999999999877553037777751788676899999799999999999972876--432432
Q ss_pred HCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCEEECCHH
Q ss_conf 11046532027851111468656878999999987654486997767631042379988642388368504300002148
Q gi|254780670|r 239 LDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQLVGDDLFVTNPE 318 (424)
Q Consensus 239 lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~IvGDDL~vTn~~ 318 (424)
|||||||||++++|.+ ++..+|++||++||.+|+++|||+||||||+|+||+||++||++++ ||||||||||||++
T Consensus 247 lD~AAsefy~~g~Y~~--~~~~~~~~e~i~~y~~li~~yPI~sIEDp~~e~D~~gw~~lt~~l~--~~ivGDDl~~Tn~~ 322 (427)
T 2pa6_A 247 LDAAASEFYKDGYYYV--EGKKLTREELLDYYKALVDEYPIVSIEDPFHEEDFEGFAMITKELD--IQIVGDDLFVTNVE 322 (427)
T ss_dssp EECCGGGGEETTEEEE--TTEEECHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHHSS--SEEEESTTTTTCHH
T ss_pred EEHHHHHCCCCCEEEC--CCCCCCHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCC--EEEECHHHHCCCHH
T ss_conf 1055552323880661--4775588999999999998699889968987565999999998639--38977054057689
Q ss_pred HHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHEECCCCHHHHHHH
Q ss_conf 88521003865223425453003899999999999879869995078887235899899981998010075611448999
Q gi|254780670|r 319 RLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVATNCGQIKTGSLARSDRIAK 398 (424)
Q Consensus 319 rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~~a~~iK~G~~~R~ER~aK 398 (424)
||++||++++||++|||||||||||||+|++++|+++||.+|||||||||||+||||||||+||+|||+|+|+||||++|
T Consensus 323 rl~~gi~~~~~nailiK~NQiGTvtet~ea~~la~~~g~~~ivShRSGETeD~~iaDLAVg~ga~~IK~G~~~R~ER~aK 402 (427)
T 2pa6_A 323 RLRKGIEMKAANALLLKVNQIGTLSEAVDAAQLAFRNGYGVVVSHRSGETEDTTIADLSVALNSGQIKTGAPARGERTAK 402 (427)
T ss_dssp HHHHHHHHTCCSEEEECHHHHCSHHHHHHHHHHHHTTTCEEEEECCSSCCSCCHHHHHHHHTTCSEEECCSSCSHHHHHH
T ss_pred HHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHH
T ss_conf 99987651677530532544200999999999999879989995788886620599999870898035169840788999
Q ss_pred HHHHHHHHHHHHHCCCCCCHHHHC
Q ss_conf 999999999831104557625304
Q gi|254780670|r 399 YNQLIRIEESLGKQAKFAGRSILI 422 (424)
Q Consensus 399 yNrLlrIee~Lg~~a~~~g~~~~~ 422 (424)
||||||||||||. ++|+|++|+.
T Consensus 403 yNrLlrIeeeLg~-~~~~g~~f~~ 425 (427)
T 2pa6_A 403 YNQLIRIEQELGL-SKYAGRNFRC 425 (427)
T ss_dssp HHHHHHHHHHSSS-CEECGGGCSC
T ss_pred HHHHHHHHHHHCC-CCCCCCCCCC
T ss_conf 9999999998384-5337633589
No 5
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=100.00 E-value=0 Score=1204.53 Aligned_cols=419 Identities=52% Similarity=0.839 Sum_probs=402.6
Q ss_pred CEEEEEEEEEEEECCCCCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCC-CCCCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 910589986886079784299999984897676634478664775467626898-6516804899999998756789759
Q gi|254780670|r 1 MFINDIIAREVIDSRGSPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQE-KRYFGKGVLKAIAFVNDEIRTALLG 79 (424)
Q Consensus 1 m~I~~i~~r~IlDSRG~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~-~~~~G~gV~~Av~~in~~i~~~L~g 79 (424)
|+|++|+|||||||||+|||||||+|++| .+|++||||||||+|||+||||++ ++|+||||.+||++||++|+|+|+|
T Consensus 2 ~~I~~v~ar~IlDSRG~PTvEvev~~~~g-~~ra~vPSGaStG~~EA~elrD~~~~~~~GkgV~~Av~~in~~i~~~Lig 80 (452)
T 3otr_A 2 VVIKDIVAREILDSRGNPTIEVDVSTEGG-VFRAAVPSGASTGIYEALELRDKDPKRYLGKGVLNAVEIVRQEIKPALLG 80 (452)
T ss_dssp CCCCEEEEEEEECTTSCEEEEEEEEETTE-EEEEECCCCBSSCSSSCBCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHTT
T ss_pred CCEEEEEEEEEECCCCCEEEEEEEEECCC-CEEEECCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 83338999999879998169999998996-08998026878886355550679952357731999999999999999879
Q ss_pred CCHHHHHHHHHHHHH-CCCCCC-----CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCC-----CCCCCCCCCEEEC
Q ss_conf 885578988864653-036643-----22123222202448998752663498488822532-----4564754300000
Q gi|254780670|r 80 CDARDQLLIDKIMID-LDGTPN-----KSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGC-----SAHILPVPLMNIL 148 (424)
Q Consensus 80 ~~~~dQ~~iD~~Li~-lDgT~n-----ks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~-----~~~~lP~P~~Nii 148 (424)
++++||++||+.|++ ||||+| ||+||||+|+|||||+|||+|+.+++|||+||++. ..+.||+||||||
T Consensus 81 ~~~~dQ~~iD~~lie~lDgT~n~~~~~ks~lGaNailavSlA~akAaA~~~~~pLy~yi~~~~~~~~~~~~lPvP~~Nii 160 (452)
T 3otr_A 81 KDPCDQKGIDMLMVEQLDGTKNEWGYSKSKLGANAILGVSIACCRAGAASKGLPLYKYIATLAGKTIDKMVMPVPFFNVI 160 (452)
T ss_dssp CCTTCHHHHHHHHHHTTTCCEETTEECCTTTCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTCCSSSEEECEECEEEE
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEECCCCCEEEC
T ss_conf 98889999999999987357653203440256154788899999999986299799987776167766520360203312
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 3664556776610256514887748999899999999999875200--00136765576448868468999999999975
Q gi|254780670|r 149 NGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSK--GYSTNVGDEGGFSPNLKTADSALDLIANSIEK 226 (424)
Q Consensus 149 nGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~--g~~t~vgDEGGfap~~~~~eeaL~ll~eAi~~ 226 (424)
|||+||+|++|||||||+|.++.||+|+|+|++||||+||++|+++ +.+|+|||||||+|+++++|++|++|++||+.
T Consensus 161 nGG~HA~~~ldiQEfmI~P~ga~sf~eal~~~~ev~~~lk~~L~~k~~~~~t~vgDEGGfap~~~~~eeaL~ll~~Ai~~ 240 (452)
T 3otr_A 161 NGGEHAGNGLALQEFLIAPVGAPNIREAIRYGSETYHHLKNVIKNKYGLDATNVGDEGGFAPNVATAEEALNLLVEAIKA 240 (452)
T ss_dssp ECGGGCSSSCCSSEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGGCBCTTSCBCCCCCSHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 67545788776037899579999999999999999999999997633887665057765144778999999999999997
Q ss_pred CCCCCCCCHHHHHCHHHHHHCCCCC--EEECC------CCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHH
Q ss_conf 3853111023431104653202785--11114------686568789999999876544869977676310423799886
Q gi|254780670|r 227 AGYNAGKDLLIALDCAASAFFKKEK--YILKG------ENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILT 298 (424)
Q Consensus 227 aGy~~g~di~i~lD~AAsefy~~~k--Y~~~~------~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~ 298 (424)
+||++ +|.|||||||||||++++ |.+++ .+..+|++||+|||.+|+++|||+||||||+|+||+||++||
T Consensus 241 aGy~~--~i~ialD~AAsefy~~~~~~Y~l~~~~~~~~~~~~~s~~elid~y~~l~~~yPiisIEDp~~e~D~~gw~~lt 318 (452)
T 3otr_A 241 AGYEG--KIKIAFDAAASEFYKQDEKKYDLDYKCKTKNASKHLTGEKLKEVYEGWLKKYPIISVEDPFDQDDFASFSAFT 318 (452)
T ss_dssp HTCTT--TSEEEEECCGGGGEETTTTEEETTTTCSSCCGGGEECHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHH
T ss_pred CCCCC--CEEEEECCCHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHH
T ss_conf 59987--6368731036877535687066412445566322379999999999999878987976898724178899999
Q ss_pred HHCCCCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHH
Q ss_conf 42388368504300002148885210038652234254530038999999999998798699950788872358998999
Q gi|254780670|r 299 NKIGSNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAV 378 (424)
Q Consensus 299 ~~~g~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAV 378 (424)
+++|++||||||||||||++||++||++++||++|||||||||||||+|++++|+++||.+|||||||||||+|||||||
T Consensus 319 ~~lg~~~~ivGDDl~vTn~~rl~kgi~~~a~NaiLiK~NQiGTvset~ea~~la~~~g~~~ivShRsGETeD~~iaDLAV 398 (452)
T 3otr_A 319 KDVGEKTQVIGDDILVTNILRIEKALKDKACNCLLLKVNQIGSVTEAIEACLLAQKSGWGVQVSHRSGETEDSFIADLVV 398 (452)
T ss_dssp HHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEECCSSCCSCCHHHHHHH
T ss_pred HHHCCCEEEECCCCCCCCHHHHHHHCCCCCCCHHEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHH
T ss_conf 98486259937754147189997421046652422521010019999999999998798799957888766424999998
Q ss_pred HHCCCHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHC
Q ss_conf 81998010075611448999999999999831104557625304
Q gi|254780670|r 379 ATNCGQIKTGSLARSDRIAKYNQLIRIEESLGKQAKFAGRSILI 422 (424)
Q Consensus 379 g~~a~~iK~G~~~R~ER~aKyNrLlrIee~Lg~~a~~~g~~~~~ 422 (424)
|++|+|||+|+|+||||++|||||||||||||++++|||++|+-
T Consensus 399 g~ga~~iK~G~p~r~ER~aKyNrLlrIee~Lg~~a~~~g~~~~~ 442 (452)
T 3otr_A 399 GLRCGQIKSGSPCRSERLCKYNQLMRIEESLGADCVYAGESFRH 442 (452)
T ss_dssp HTTCCEEECCCSCSHHHHHHHHHHHHHHHHHGGGEEECGGGTTS
T ss_pred HHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEECCHHCCC
T ss_conf 71898111489820788999999999999844354877110488
No 6
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=100.00 E-value=0 Score=1201.23 Aligned_cols=416 Identities=52% Similarity=0.853 Sum_probs=403.4
Q ss_pred EEEEEEEEEEEECCCCCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCC-CCCCCCHHHHHHHHHHHHHHHHHC--
Q ss_conf 10589986886079784299999984897676634478664775467626898-651680489999999875678975--
Q gi|254780670|r 2 FINDIIAREVIDSRGSPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQE-KRYFGKGVLKAIAFVNDEIRTALL-- 78 (424)
Q Consensus 2 ~I~~i~~r~IlDSRG~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~-~~~~G~gV~~Av~~in~~i~~~L~-- 78 (424)
+|++|++||||||||||||||||+|++| .+|++||||||||+|||+||||++ ++|+||||.+||+|||++|+|+|+
T Consensus 1 tI~~v~ar~IlDSRG~PTvEvev~~~~g-~~ra~vPSGAStG~~EA~elrD~~~~ry~GkgV~~AV~~vn~~I~~~Li~~ 79 (439)
T 2akz_A 1 SIEKIWAREILDSRGNPTVEVDLYTAKG-LFRAAVPSGASTGIYEALELRDGDKQRYLGKGVLKAVDHINSTIAPALISS 79 (439)
T ss_dssp CCCEEEEEEEECTTSCEEEEEEEEETTE-EEEEECCBCSSCCTTSCCCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHHHH
T ss_pred CCCEEEEEEEECCCCCCEEEEEEEECCC-CEEEECCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 9468999999748997149999998898-489974678888750566616799643577019999999999999999867
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCC---CCCCCCCCCCCEEECCCCCCCC
Q ss_conf 9885578988864653036643221232222024489987526634984888225---3245647543000003664556
Q gi|254780670|r 79 GCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLG---GCSAHILPVPLMNILNGGIHAD 155 (424)
Q Consensus 79 g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~---~~~~~~lP~P~~NiinGG~HA~ 155 (424)
|++++||++||+.|++||||+|||++|||+|+|||||+|||+|+.+++|||+||+ +...++||+|||||||||+||+
T Consensus 80 g~~~~dQ~~iD~~L~elDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yi~~l~g~~~~~lP~Pm~NIinGG~HA~ 159 (439)
T 2akz_A 80 GLSVVEQEKLDNLMLELDGTENKSKFGANAILGVSLAVCKAGAAERELPLYRHIAQLAGNSDLILPVPAFNVINGGSHAG 159 (439)
T ss_dssp CCCTTCHHHHHHHHHHHHCSTTCTTTCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTCCSCCBCEEEEEEEECGGGSS
T ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCC
T ss_conf 99867599999999984187541113347899887999999998739988999998648987424714036513655788
Q ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 776610256514887748999899999999999875200--001367655764488684689999999999753853111
Q gi|254780670|r 156 NALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSK--GYSTNVGDEGGFSPNLKTADSALDLIANSIEKAGYNAGK 233 (424)
Q Consensus 156 ~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~--g~~t~vgDEGGfap~~~~~eeaL~ll~eAi~~aGy~~g~ 233 (424)
|++|||||||+|.|+.||+|+|+|++||||+||++|+++ +++|+|||||||+|++++++++|++|++||+.+||+ .
T Consensus 160 ~~ldiQEfmIiP~ga~sf~eal~~~~eV~~~lk~~L~~k~~~~~t~vgDEGGfaP~~~~~eeaL~~l~~ai~~ag~~--~ 237 (439)
T 2akz_A 160 NKLAMQEFMILPVGAESFRDAMRLGAEVYHTLKGVIKDKYGKDATNVGDEGGFAPNILENSEALELVKEAIDKAGYT--E 237 (439)
T ss_dssp SSCCSCEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGGCBCTTSCBCCSCCCHHHHHHHHHHHHHHHTCT--T
T ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC--C
T ss_conf 76660047872699999999999999999999999876236645651687776889755187999999999971987--4
Q ss_pred CHHHHHCHHHHHHCCCCCEEECCC-----CCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEE
Q ss_conf 023431104653202785111146-----865687899999998765448699776763104237998864238836850
Q gi|254780670|r 234 DLLIALDCAASAFFKKEKYILKGE-----NLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQLV 308 (424)
Q Consensus 234 di~i~lD~AAsefy~~~kY~~~~~-----~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~Iv 308 (424)
||.|||||||||||+++||.|+++ +..+|++||++||.+|+++|||+||||||+|+||+||++||+++| ||||
T Consensus 238 ~i~ialD~AAsefy~~gkY~~~~~~~~~~~~~~~~~eli~~y~~li~kyPIisIEDp~~e~D~~gw~~lt~~lg--~~Iv 315 (439)
T 2akz_A 238 KIVIGMDVAASEFYRDGKYDLDFKSPTDPSRYITGDQLGALYQDFVRDYPVVSIEDPFDQDDWAAWSKFTANVG--IQIV 315 (439)
T ss_dssp TCEEEEECCGGGGEETTEECTTTTSSCCGGGCBCHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHTCS--SEEE
T ss_pred EEEEEEHHHHHHHHHCCCEEEEECCCCCCCCEEEHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHC--CEEE
T ss_conf 25653224256543188656750356775303106889999999872088689967987043799999999709--7786
Q ss_pred CCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHEEC
Q ss_conf 43000021488852100386522342545300389999999999987986999507888723589989998199801007
Q gi|254780670|r 309 GDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVATNCGQIKTG 388 (424)
Q Consensus 309 GDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~~a~~iK~G 388 (424)
||||||||++||++||++++||++|||||||||||||+|++++|+++||.+|||||||||||+||||||||++|+|||+|
T Consensus 316 GDDl~vTn~~rl~~gi~~~~~nailiK~NQiGTvset~ea~~la~~~g~~~ivShrSGETeD~~iaDLAVg~ga~~iK~G 395 (439)
T 2akz_A 316 GDDLTVTNPKRIERAVEEKACNCLLLKVNQIGSVTEAIQACKLAQENGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTG 395 (439)
T ss_dssp ESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEECCSBCCSCCHHHHHHHHHTCSEEECC
T ss_pred CCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCEEECC
T ss_conf 53003556899997775477772686266654199999999999987987999688888663028899886088823348
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHC
Q ss_conf 5611448999999999999831104557625304
Q gi|254780670|r 389 SLARSDRIAKYNQLIRIEESLGKQAKFAGRSILI 422 (424)
Q Consensus 389 ~~~R~ER~aKyNrLlrIee~Lg~~a~~~g~~~~~ 422 (424)
+|+||||++||||||||||+||++++|||++|+.
T Consensus 396 ~p~r~ER~aKyNrLLrIeeeLg~~~~~~g~~f~~ 429 (439)
T 2akz_A 396 APCRSERLAKYNQLMRIEEELGDEARFAGHNFRN 429 (439)
T ss_dssp CSCSHHHHHHHHHHHHHHHHHGGGCCBCGGGTTC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCEECCCCCCC
T ss_conf 9830678999999999999852244878746798
No 7
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=100.00 E-value=0 Score=1203.21 Aligned_cols=417 Identities=51% Similarity=0.814 Sum_probs=403.0
Q ss_pred EEEEEEEEEEEECCCCCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCC-CCCCCCHHHHHHHHHHHHHHHHHC--
Q ss_conf 10589986886079784299999984897676634478664775467626898-651680489999999875678975--
Q gi|254780670|r 2 FINDIIAREVIDSRGSPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQE-KRYFGKGVLKAIAFVNDEIRTALL-- 78 (424)
Q Consensus 2 ~I~~i~~r~IlDSRG~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~-~~~~G~gV~~Av~~in~~i~~~L~-- 78 (424)
.|++|+|||||||||||||||||+|++| .+||+||||||||+|||+||||++ ++|+||||.+||++||++|+|+|+
T Consensus 1 ~I~~v~aR~IlDSRG~PTVEvev~~~~g-~~ra~~PSGaStG~~EA~elrDg~~~~~~GkgV~~Av~~vn~~i~~~Li~~ 79 (436)
T 2al1_A 1 AVSKVYARSVYDSRGNPTVEVELTTEKG-VFRSIVPSGASTGVHEALEMRDGDKSKWMGKGVLHAVKNVNDVIAPAFVKA 79 (436)
T ss_dssp CCCEEEEEEEECTTSCEEEEEEEEETTE-EEEEECCBCSSCCTTSCCCCCCCCTTSGGGTCCHHHHHHHHHTHHHHHHHH
T ss_pred CCCEEEEEEEECCCCCCEEEEEEEECCC-CEEEEECCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9677999999748998318999997898-679970278778874455506898544575219999999999989999627
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCC-----CCCCCCCCCEEECCCCCC
Q ss_conf 988557898886465303664322123222202448998752663498488822532-----456475430000036645
Q gi|254780670|r 79 GCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGC-----SAHILPVPLMNILNGGIH 153 (424)
Q Consensus 79 g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~-----~~~~lP~P~~NiinGG~H 153 (424)
|+|++||++||++|++||||+|||+||||+|+|||||+|||+|+.+++|||+||++. ..++||+|||||||||+|
T Consensus 80 g~d~~dQ~~iD~~Li~lDgT~nks~lGaNailavSlA~akAaA~~~~~pLy~yl~~~~~~~~~~~~lP~P~~NiinGG~H 159 (436)
T 2al1_A 80 NIDVKDQKAVDDFLISLDGTANKSKLGANAILGVSLAASRAAAAEKNVPLYKHLADLSKSKTSPYVLPVPFLNVLNGGSH 159 (436)
T ss_dssp TCCTTCHHHHHHHHHHHHCSTTSTTTCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHTCCCTTEEECEEEEEEEECGGG
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHEEECCCCC
T ss_conf 98878899999999983386344557752355788999999987539859999887625666664457316213236656
Q ss_pred CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 56776610256514887748999899999999999875200--0013676557644886846899999999997538531
Q gi|254780670|r 154 ADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSK--GYSTNVGDEGGFSPNLKTADSALDLIANSIEKAGYNA 231 (424)
Q Consensus 154 A~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~--g~~t~vgDEGGfap~~~~~eeaL~ll~eAi~~aGy~~ 231 (424)
|+|++|||||||+|.|+.||+|+|+|++||||+||++|+++ +.+++|||||||||++++++++|++|++||+++||+.
T Consensus 160 A~~~ldiQEfmIiP~ga~sf~eal~~~~eVy~~lk~~L~~k~g~~~t~vgDEGGfaP~~~~~eeaL~ll~~Ai~~aGy~~ 239 (436)
T 2al1_A 160 AGGALALQEFMIAPTGAKTFAEALRIGSEVYHNLKSLTKKRYGASAGNVGDEGGVAPNIQTAEEALDLIVDAIKAAGHDG 239 (436)
T ss_dssp SSSSCCSCEEEEECTTCSSHHHHHHHHHHHHHHHHHHHHHHHCGGGGSBCTTSCBCCCCSCHHHHHHHHHHHHHHHTCTT
T ss_pred CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 77766601378506899999999999999999999999863276667637876627788871999999999999649976
Q ss_pred CCCHHHHHCHHHHHHCCCCCEEECCC------CCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCE
Q ss_conf 11023431104653202785111146------865687899999998765448699776763104237998864238836
Q gi|254780670|r 232 GKDLLIALDCAASAFFKKEKYILKGE------NLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNC 305 (424)
Q Consensus 232 g~di~i~lD~AAsefy~~~kY~~~~~------~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~ 305 (424)
+|.|||||||||||+++||.|+++ +..+|++||++||.+|+++|||+||||||+|+||+||++||+++| |
T Consensus 240 --~i~i~lD~AASefy~~~kY~~~~~~~~~~~~~~~s~~elid~y~~l~~~yPIisIEDp~~e~D~~gw~~lt~~~g--~ 315 (436)
T 2al1_A 240 --KVKIGLDCASSEFFKDGKYDLDFKNPNSDKSKWLTGPQLADLYHSLMKRYPIVSIEDPFAEDDWEAWSHFFKTAG--I 315 (436)
T ss_dssp --TCEEEEECCGGGGEETTEECTTTTCTTCCGGGCBCHHHHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHTTCC--S
T ss_pred --CEEEEECCHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHCC--C
T ss_conf --358986230565512882477612677666630036999999999997699889967988024899999998549--1
Q ss_pred EEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCHH
Q ss_conf 85043000021488852100386522342545300389999999999987986999507888723589989998199801
Q gi|254780670|r 306 QLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVATNCGQI 385 (424)
Q Consensus 306 ~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~~a~~i 385 (424)
|||||||||||++||++||++++||++|||||||||||||+|++++|+++||.+|||||||||||+||||||||++|+||
T Consensus 316 ~iVGDDL~vTn~~rl~~gi~~~~~NavliK~NQiGTvset~eai~~a~~~g~~~ivShrsGETeD~~iadLAVg~ga~~i 395 (436)
T 2al1_A 316 QIVADDLTVTNPKRIATAIEKKAADALLLKVNQIGTLSESIKAAQDSFAAGWGVMVSHRSGETEDTFIADLVVGLRTGQI 395 (436)
T ss_dssp EEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEECCSBCCSCCHHHHHHHHTTCSEE
T ss_pred EEECCCCCCCCHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHCCCEE
T ss_conf 78543002343255551313577661276033422099999999999987987999778888662059999987089835
Q ss_pred EECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCC
Q ss_conf 00756114489999999999998311045576253047
Q gi|254780670|r 386 KTGSLARSDRIAKYNQLIRIEESLGKQAKFAGRSILIH 423 (424)
Q Consensus 386 K~G~~~R~ER~aKyNrLlrIee~Lg~~a~~~g~~~~~~ 423 (424)
|+|+|+||||++||||||||||+||++++|||++||..
T Consensus 396 K~G~~~R~ER~aKyNrLlrIee~Lg~~a~~~g~~~~~~ 433 (436)
T 2al1_A 396 KTGAPARSERLAKLNQLLRIEEELGDNAVFAGENFHHG 433 (436)
T ss_dssp ECCCSCSHHHHHHHHHHHHHHHHHGGGEEECGGGCTTG
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCC
T ss_conf 41788516789999999999998541448687034683
No 8
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A*
Probab=100.00 E-value=0 Score=393.09 Aligned_cols=354 Identities=19% Similarity=0.261 Sum_probs=279.6
Q ss_pred EEEEECCCCC-------------EEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 6886079784-------------299999984897676634478664775467626898651680489999999875678
Q gi|254780670|r 9 REVIDSRGSP-------------TIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAFVNDEIRT 75 (424)
Q Consensus 9 r~IlDSRG~P-------------TvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~in~~i~~ 75 (424)
+.-|..+|.| +|.|+|.+++|.+|++-|......|.-. .++.|.. ..-+..+++.|+|
T Consensus 29 ~d~~~~~~~p~t~gf~~v~~~~e~i~V~i~l~DG~~G~GEcaav~~~g~gg------~dpl~~a---~~~i~~ie~~laP 99 (413)
T 1kcz_A 29 HDGFTYTGSTVTEGFTQVRQKGESISVLLVLEDGQVAHGDCAAVQYSGAGG------RDPLFLA---KDFIPVIEKEIAP 99 (413)
T ss_dssp EETTEEESCCCSTTCSSSEEECCEEEEEEEETTSCEEEEEECCCTTTTSTT------SCSCCCH---HHHHHHHHHHTHH
T ss_pred CCCCCCCCCCCCCCCCCEEECCCEEEEEEEECCCCEEEEEECCCCCCCCCC------CCCCCCH---HHHHHHHHHHHHH
T ss_conf 457413478777763202234716999999789988998531456777766------6643238---9999999863208
Q ss_pred HHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCC---CCCCCCCCCEEECCCCC
Q ss_conf 975988557898886465303664322123222202448998752663498488822532---45647543000003664
Q gi|254780670|r 76 ALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGC---SAHILPVPLMNILNGGI 152 (424)
Q Consensus 76 ~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~---~~~~lP~P~~NiinGG~ 152 (424)
.|+|.|+.++..+.+.|..+ ..+..++.+.+..+||+|++.|.|+..++|||+||++. .....|+|+++..+++.
T Consensus 100 ~LiG~d~~~~~~l~~~l~~~--~~~~~~~~~Air~GVs~Al~Da~Ak~~g~pL~~lLGg~~~~~~~~~~vpi~~~~g~~~ 177 (413)
T 1kcz_A 100 KLIGREITNFKPMAEEFDKM--TVNGNRLHTAIRYGITQAILDAVAKTRKVTMAEVIRDEYNPGAEINAVPVFAQSGDDR 177 (413)
T ss_dssp HHTTCBCCCHHHHHHHHHHC--EETTEECCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHSTTCCCCCCCEECCCTTCT
T ss_pred HHCCCCCCCHHHHHHHHHHH--HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCC
T ss_conf 86399811699999999887--5378406789999899999999998829939998412407987666546774167333
Q ss_pred CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH-HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 55677661025651488774899989999999-99998752000013676557644886846899999999997538531
Q gi|254780670|r 153 HADNALDFQEFMIMPVGAENIREAIRMGAEVF-HTLKKELKSKGYSTNVGDEGGFSPNLKTADSALDLIANSIEKAGYNA 231 (424)
Q Consensus 153 HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~-~~lk~~L~~~g~~t~vgDEGGfap~~~~~eeaL~ll~eAi~~aGy~~ 231 (424)
|.+ ..++++.++++| |.+++. +.+.+|++| .+.+++++.+.++|+++++.+
T Consensus 178 ~~~-----------------~~~~l~~~~~~~~~~g~~~-----~K~KvG~~g------~~~~e~l~~~~erI~~ir~~~ 229 (413)
T 1kcz_A 178 YDN-----------------VDKMIIKEADVLPHALINN-----VEEKLGLKG------EKLLEYVKWLRDRIIKLRVRE 229 (413)
T ss_dssp THH-----------------HHHHHHTTCSEEEECCCCC-----CCCCCCTTS------HHHHHHHHHHHHHHHHHCSST
T ss_pred CCC-----------------HHHHHHHHHHHHHHHHHHH-----EEEEECCCC------CCCHHHHHHHHHHHHHHHHCC
T ss_conf 327-----------------9999998889876641001-----467325786------541889999999999986225
Q ss_pred CCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCE--EEEECCCCCCCHHHH----HHHHHHC---C
Q ss_conf 110234311046532027851111468656878999999987654486--997767631042379----9886423---8
Q gi|254780670|r 232 GKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPI--YSIEDGMSEDDWHGW----KILTNKI---G 302 (424)
Q Consensus 232 g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI--~sIEDP~~e~D~~gw----~~l~~~~---g 302 (424)
|.++.|.+|+..+..+.. ..+++++++|+..|.+.++. ++||||++++||++| ++|+.++ |
T Consensus 230 G~~i~l~iDan~~~~~~~----------~~d~~~a~~~l~~L~~~~~~~~l~IEqPl~~~d~~~~~e~la~L~~~l~~~g 299 (413)
T 1kcz_A 230 DYAPIFHIDVYGTIGAAF----------DVDIKAMADYIQTLAEAAKPFHLRIEGPMDVEDRQKQMEAMRDLRAELDGRG 299 (413)
T ss_dssp TCCCEEEEECTTHHHHHT----------TTCHHHHHHHHHHHHHHHTTSCEEEECSBCCSSHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCCCCCCC----------CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 888479997677653344----------8999999999999997466765200488774245669999999999886258
Q ss_pred CCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHH--HHHHHH
Q ss_conf 836850430000214888521003865223425453003899999999999879869995078887235899--899981
Q gi|254780670|r 303 SNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIA--DLAVAT 380 (424)
Q Consensus 303 ~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~ia--DLAVg~ 380 (424)
.+++|++|+.++| +..++++++.+++|.+.|||+|+|++||+++++++|+++|+.+++|||++||+|++++ |||+|+
T Consensus 300 ~~vpI~~DE~~~t-~~d~~~~i~~~a~d~v~iK~~~~GGi~ea~~~~~~a~~~Gi~~~igg~~~Et~~s~~a~~hla~a~ 378 (413)
T 1kcz_A 300 VDAELVADEWCNT-VEDVKFFTDNKAGHMVQIKTPDLGGVNNIADAIMYCKANGMGAYCGGTCNETNRSAEVTTNIGMAC 378 (413)
T ss_dssp CCEEEEECTTCCS-HHHHHHHHHTTCSSEEEECTGGGSSTHHHHHHHHHHHHTTCEEEECCCTTSCHHHHHHHHHHHHHH
T ss_pred CCCCEECCCCCCC-HHHHHHHHHCCCCCEEEECCHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHC
T ss_conf 8774405644168-999999986076888995403138889999999999985991998578587635899999999734
Q ss_pred CCCHH--EECCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99801--007561144899999999999983110
Q gi|254780670|r 381 NCGQI--KTGSLARSDRIAKYNQLIRIEESLGKQ 412 (424)
Q Consensus 381 ~a~~i--K~G~~~R~ER~aKyNrLlrIee~Lg~~ 412 (424)
++.|+ |.|.+++.+++.|||+++||++.||.+
T Consensus 379 ~~~~~l~kpg~~~~~~~~~~~ne~~r~~~~~~~~ 412 (413)
T 1kcz_A 379 GARQVLAKPGMGVDEGMMIVKNEMNRVLALVGRR 412 (413)
T ss_dssp TCSEEECCSSSSSHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 8641003798764542689998899999985368
No 9
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=100.00 E-value=0 Score=379.39 Aligned_cols=347 Identities=18% Similarity=0.181 Sum_probs=286.9
Q ss_pred EEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 29999998489767663447866477546762689865168048999999987567897598855789888646530366
Q gi|254780670|r 19 TIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAFVNDEIRTALLGCDARDQLLIDKIMIDLDGT 98 (424)
Q Consensus 19 TvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT 98 (424)
+|.|+|.+++|.+|.+-|.....+|.-. .++.|. ....+..|++.|+|.|+|+|++++..+. ..+|++
T Consensus 52 ~v~V~~~l~dG~~g~Gecaav~~~G~gg------rdpl~~---a~~~~~~ie~~iaP~LiG~D~~~~~~l~---~~ld~~ 119 (413)
T 1kko_A 52 CVSVQLILENGAVAVGDCAAVQYSGAGG------RDPLFL---AEHFIPFLNDHIKPLLEGRDVDAFLPNA---RFFDKL 119 (413)
T ss_dssp EEEEEEEETTSCEEEEEECCCTTTTSTT------CCCCCC---HHHHHHHHHHHTHHHHTTCBCSCSHHHH---HHHHHC
T ss_pred EEEEEEEECCCCEEEEEECCCCCCCCCC------CCCHHH---HHHHHHHHHHHCCHHHCCCCCCCHHHHH---HHHHHH
T ss_conf 7999999789988987403556777776------550220---9999999985024364399820499999---999865
Q ss_pred CCCCCCCCCCC-CHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHH
Q ss_conf 43221232222-02448998752663498488822532456475430000036645567766102565148877489998
Q gi|254780670|r 99 PNKSRLGANAI-LGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNILNGGIHADNALDFQEFMIMPVGAENIREAI 177 (424)
Q Consensus 99 ~nks~lGaNai-lAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~NiinGG~HA~~~l~iQEfmIiP~g~~sf~eal 177 (424)
..+.+.+.|++ ++||+|++.|.|+..++|||+||++.. ..|.|+++|.+++.|.++..+.||+||...- ..+.
T Consensus 120 ~~~~~~~~~Ai~~GVs~Al~Da~Ak~~~~pL~~lLGg~~--~~~~~~~~v~~~~~~g~~~~~~~e~mi~~~~-~~~~--- 193 (413)
T 1kko_A 120 RIDGNLLHTAVRYGLSQALLDATALASGRLKTEVVCDEW--QLPCVPEAIPLFGQSGDDRYIAVDKMILKGV-DVLP--- 193 (413)
T ss_dssp EETTEECCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHT--TCCCCCCCCCEECCCTTCTTHHHHHHHHTTC-SEEE---
T ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC--CCCCCCEEEEEEECCCCCCCCCHHHHHHHHH-HHHH---
T ss_conf 637914889999989999999999984993999957334--7987630365532148632036999999999-9877---
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCC
Q ss_conf 99999999999875200001367655764488684689999999999753853111023431104653202785111146
Q gi|254780670|r 178 RMGAEVFHTLKKELKSKGYSTNVGDEGGFSPNLKTADSALDLIANSIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGE 257 (424)
Q Consensus 178 ~~~~ev~~~lk~~L~~~g~~t~vgDEGGfap~~~~~eeaL~ll~eAi~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~ 257 (424)
|.+.+ .+...+|.+| .+..+.++.+.+.|+++++.+|.++.|.+|+..+..+.
T Consensus 194 -------~~~~~-----~lK~KvG~~~------~~~~e~l~~~~erI~~ir~~~G~~~~l~vDan~~~~~~--------- 246 (413)
T 1kko_A 194 -------HALIN-----NVEEKLGFKG------EKLREYVRWLSDRILSLRSSPRYHPTLHIDVYGTIGLI--------- 246 (413)
T ss_dssp -------ETTCC-----CCCCCCCTTS------HHHHHHHHHHHHHHHHHCSSTTCCCEEEEECTTHHHHH---------
T ss_pred -------HHHHH-----HEEEEECCCC------CCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC---------
T ss_conf -------64333-----3246306786------65377898999999999853488867999626645433---------
Q ss_pred CCCCCHHHHHHHHHHHHHHCCE--EEEECCCCCCCHHHHHHHHHHC-------CCCEEEECCCEEECCHHHHHHHHHCCC
Q ss_conf 8656878999999987654486--9977676310423799886423-------883685043000021488852100386
Q gi|254780670|r 258 NLELQPNEMASYLANLVDQYPI--YSIEDGMSEDDWHGWKILTNKI-------GSNCQLVGDDLFVTNPERLHKGINEEV 328 (424)
Q Consensus 258 ~~~~t~~elid~y~~l~~~yPI--~sIEDP~~e~D~~gw~~l~~~~-------g~~~~IvGDDL~vTn~~rl~~gi~~~~ 328 (424)
...+++++++|+..|.+.++. ++||||++++||++|.+.++++ |.+++|++|+..+| +..+++.|+.++
T Consensus 247 -~~~~~~~ai~~~~~L~e~~~~~~l~IEqPv~~~D~~~~i~~la~l~~~l~~~g~~vpI~~DE~~~t-~~d~~~~i~~~a 324 (413)
T 1kko_A 247 -FDMDPVRCAEYIASLEKEAQGLPLYIEGPVDAGNKPDQIRMLTAITKELTRLGSGVKIVADEWCNT-YQDIVDFTDAGS 324 (413)
T ss_dssp -TTTCHHHHHHHHHHTGGGGTTSCEEEECCCCCSSHHHHHHHHHHHHHHHHHHTCCCEEEECTTCCS-HHHHHHHHHTTC
T ss_pred -CCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCC-HHHHHHHHHHCC
T ss_conf -389999999999999984688764541799996556789999999998760488873432554258-999999876086
Q ss_pred CCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHH--HHHHHHCCCHH--EECCCCHHHHHHHHHHHHH
Q ss_conf 5223425453003899999999999879869995078887235899--89998199801--0075611448999999999
Q gi|254780670|r 329 ANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIA--DLAVATNCGQI--KTGSLARSDRIAKYNQLIR 404 (424)
Q Consensus 329 ~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~ia--DLAVg~~a~~i--K~G~~~R~ER~aKyNrLlr 404 (424)
+|.+.||++|+|++||+++++++|+++|+.+++||+++||++++++ |+|+++++.|+ |.|.+++.+++.|||+++|
T Consensus 325 ~d~v~iK~~~~GGitea~~~~~~a~~~Gi~~~igg~~~Et~~s~~a~~hva~at~~~~~l~kpg~~~d~g~~~~~ne~~r 404 (413)
T 1kko_A 325 CHMVQIKTPDLGGIHNIVDAVLYCNKHGMEAYQGGTCNETEISARTCVHVALAARPMRMLIKPGMGFDEGLNIVFNEMNR 404 (413)
T ss_dssp CSEEEECGGGGSSTHHHHHHHHHHHHHTCEEEECCCTTSCHHHHHHHHHHHHHHCCSEEECCSCSSSHHHHHHHHHHHHH
T ss_pred CCEEEECHHHCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCHHHHHHHHHH
T ss_conf 88799550323899999999999998699389858858872889999999984386421148998655543388888999
Q ss_pred HHHHHHHC
Q ss_conf 99983110
Q gi|254780670|r 405 IEESLGKQ 412 (424)
Q Consensus 405 Iee~Lg~~ 412 (424)
|+++|+.+
T Consensus 405 ~~~~~~~~ 412 (413)
T 1kko_A 405 TIALLQTK 412 (413)
T ss_dssp HHHHHHC-
T ss_pred HHHHHCCC
T ss_conf 99985379
No 10
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=99.90 E-value=1.9e-21 Score=177.47 Aligned_cols=329 Identities=17% Similarity=0.179 Sum_probs=224.5
Q ss_pred CEEEEEEEEEEEECCCCCE-EEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 9105899868860797842-999999848976766344786647754676268986516804899999998756789759
Q gi|254780670|r 1 MFINDIIAREVIDSRGSPT-IEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAFVNDEIRTALLG 79 (424)
Q Consensus 1 m~I~~i~~r~IlDSRG~PT-vEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~in~~i~~~L~g 79 (424)
|+|++|....| -.+|- |=|+|.|++|..|.+-+..| .......+++.++|.|+|
T Consensus 4 ~kIt~i~~~~~---~~~~~~v~V~i~tddG~~G~GE~~~~----------------------~~~~~~~i~~~l~p~liG 58 (410)
T 3dip_A 4 PRITALRTIRL---PERPKLIWVEVETEDGLTGLGETFRG----------------------AQAVEAVLHEQTAPAIIG 58 (410)
T ss_dssp CBEEEEEEEEE---TTEEEEEEEEEEETTSCEEEEEEESC----------------------HHHHHHHHHHTHHHHHTT
T ss_pred CCEEEEEEEEE---CCCCCEEEEEEEECCCCEEEEEECCC----------------------HHHHHHHHHHHHHHHHCC
T ss_conf 85777999996---79888899999989998899971599----------------------799999999998999769
Q ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCC
Q ss_conf 88557898886465303664322123222202448998752663498488822532456475430000036645567766
Q gi|254780670|r 80 CDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNILNGGIHADNALD 159 (424)
Q Consensus 80 ~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~NiinGG~HA~~~l~ 159 (424)
+++.+...|.+.|...........+..+++.|+.+|++-+.++..++|||+.|+|....++ |....+++.......-.
T Consensus 59 ~~~~~i~~i~~~l~~~~~~~~~~g~~~~A~said~ALwDl~gK~~~~Pl~~LLGG~~r~~i--pvyas~~~~~~~~~~~~ 136 (410)
T 3dip_A 59 RAAENITSISSELLNPYVGFGSSSAEVRAASAVDIALWDLAGQRAGVPLHVALGGAARDRV--PVYATCAGYDFNTSLGG 136 (410)
T ss_dssp SBTTCHHHHHHHHTCCSSSCSSCCHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCSCSEE--EEEEEECTTTC------
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCE--EEEEEECCCCCHHHHHH
T ss_conf 9844399999999986541388641578999999999999987739979998388877725--68887346663012223
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCC-CC---CCCCCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf 10256514887748999899999999999875200001---3676557-64---48868468999999999975385311
Q gi|254780670|r 160 FQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYS---TNVGDEG-GF---SPNLKTADSALDLIANSIEKAGYNAG 232 (424)
Q Consensus 160 iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~---t~vgDEG-Gf---ap~~~~~eeaL~ll~eAi~~aGy~~g 232 (424)
.+++.....+...+.+.....-+.....++.. ++|+. ..+++.. .+ -....+.++-++.+...-+. .|
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gf~~~Kik~~~~~~~~~~~~~g~~~~~~di~~v~~ir~~----~G 211 (410)
T 3dip_A 137 RRSIGSAELSTGPYDDQVAFMRDAGVLAESLV-AEGYAAMKIWPFDDFASITPHHISLTDLKDGLEPFRKIRAA----VG 211 (410)
T ss_dssp ----------------------CHHHHHHHHH-HTTCSEEEECTTHHHHTTCTTCCCHHHHHHHHHHHHHHHHH----HT
T ss_pred HHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHH-HCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH----HC
T ss_conf 33201133045631356777899999999999-70767466424443354555546703099999999999987----08
Q ss_pred CCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCC-CCCHHHHHHHHHHCCCCEEEECCC
Q ss_conf 1023431104653202785111146865687899999998765448699776763-104237998864238836850430
Q gi|254780670|r 233 KDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMS-EDDWHGWKILTNKIGSNCQLVGDD 311 (424)
Q Consensus 233 ~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~-e~D~~gw~~l~~~~g~~~~IvGDD 311 (424)
.++.|.+|+- ...|.++-+.+ .+.+++|+|.++|||+. ++|+++|+.+.+..+-.+ .+|++
T Consensus 212 ~~~~l~~Dan----------------~~~~~~~A~~~-~~~l~~~~l~w~EeP~~~~~~~~~~~~l~~~~~~pi-a~gE~ 273 (410)
T 3dip_A 212 QRIEIMCELH----------------SLWGTHAAARI-CNALADYGVLWVEDPIAKMDNIPAVADLRRQTRAPI-CGGEN 273 (410)
T ss_dssp TSSEEEEECT----------------TCBCHHHHHHH-HHHGGGGTCSEEECCBSCTTCHHHHHHHHHHHCCCE-EECTT
T ss_pred CCCCCHHCCC----------------CCCCHHHHHHH-HHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCCCCC-CCCCC
T ss_conf 7421011046----------------67899999999-999872597667678896232378999984269640-06877
Q ss_pred EEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCC
Q ss_conf 00021488852100386522342545300389999999999987986999507888723589989998199
Q gi|254780670|r 312 LFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVATNC 382 (424)
Q Consensus 312 L~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~~a 382 (424)
+ .++..+++.|+.++++.+.+|++++|-+|+++..+.+|+.+|.. |..|..|...-...+||+.++..
T Consensus 274 ~--~~~~~~~~~i~~~a~di~~~d~~~~GGit~~~ki~~lA~~~gi~-v~~H~~g~i~~aa~~hlaaa~pn 341 (410)
T 3dip_A 274 L--AGTRRFHEMLCADAIDFVMLDLTWCGGLSEGRKIAALAETHARP-LAPHXTGPVALMAGLHLALHAPT 341 (410)
T ss_dssp C--CSHHHHHHHHHTTCCSEEEECTTTSSCHHHHHHHHHHHHHTTCC-EEECSSCHHHHHHHHHHHHHCTT
T ss_pred C--CCHHHHHHHHHHCCCHHEEECCCCCCCHHHHHHHHHHHHHCCCE-EEECCCCHHHHHHHHHHHHHCCC
T ss_conf 6--67999999997365111331675578488999999999986998-99658779999999999986887
No 11
>2qjj_A Mandelate racemase/muconate lactonizing enzyme; mannonate dehydratase, enolase superfamily, lyase; 1.80A {Novosphingobium aromaticivorans} PDB: 2qjn_A* 2qjm_A*
Probab=99.86 E-value=6.5e-22 Score=180.92 Aligned_cols=309 Identities=17% Similarity=0.224 Sum_probs=215.0
Q ss_pred CEEEEEEEEEEEECCCCCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf 91058998688607978429999998489767663447866477546762689865168048999999987567897598
Q gi|254780670|r 1 MFINDIIAREVIDSRGSPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAFVNDEIRTALLGC 80 (424)
Q Consensus 1 m~I~~i~~r~IlDSRG~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~in~~i~~~L~g~ 80 (424)
|+|++|+ .++++.|+..|-|+|+|++|.+|.+-++.+.+ -..++..+++.++|.|+|+
T Consensus 1 mkit~~~--~~~~~~~r~~v~V~I~td~G~~G~GE~~~~~~--------------------~~~~~~~i~~~l~p~liG~ 58 (402)
T 2qjj_A 1 MKITAAR--VIITCPGRNFVTLKIETDQGVYGIGDATLNGR--------------------ELSVVAYLQEHVAPCLIGM 58 (402)
T ss_dssp CCEEEEE--EEEECSSSCEEEEEEEETTSCEEEEECCCTTC--------------------HHHHHHHHHHTHHHHHTTS
T ss_pred CEEEEEE--EEEECCCCCEEEEEEEECCCCEEEEEECCCCC--------------------HHHHHHHHHHHHHHHHCCC
T ss_conf 9473899--99988999879999998998989997017887--------------------4999999999999997699
Q ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCC
Q ss_conf 85578988864653036643221232222024489987526634984888225324564754300000366455677661
Q gi|254780670|r 81 DARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNILNGGIHADNALDF 160 (424)
Q Consensus 81 ~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~NiinGG~HA~~~l~i 160 (424)
|+.+...|-+.|...... ........++.|+.+|+.-+.++..++|||+.|++.... ++|+...++|.
T Consensus 59 d~~~ie~i~~~~~~~~~~-~~~~~~~~a~said~ALwDl~gK~~g~Pl~~lLGg~~~~--~i~~y~~~~~~--------- 126 (402)
T 2qjj_A 59 DPRRIEDIWQYVYRGAYW-RRGPVTMRAIAAVDMALWDIKAKMAGMPLYQLLGGRSRD--GIMVYGHANGS--------- 126 (402)
T ss_dssp CTTCHHHHHHHHHHHTSS-CCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHTCCSCS--SEEEEEEEEES---------
T ss_pred CHHHHHHHHHHHHHHCCC-CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCC--CCCEEECCCCC---------
T ss_conf 877899999999863203-677505789999999999999886099604217874356--64123125779---------
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCC---------C------CCCC-----CCCHHHHH
Q ss_conf 0256514887748999899999999999875200001---3676557---------6------4488-----68468999
Q gi|254780670|r 161 QEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYS---TNVGDEG---------G------FSPN-----LKTADSAL 217 (424)
Q Consensus 161 QEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~---t~vgDEG---------G------fap~-----~~~~eeaL 217 (424)
+..+..+... ..+ ++|+. ..+|-.+ + +-.. ..+..+.+
T Consensus 127 -----------~~~~~~~~~~---~~~-----~~G~~~~Kik~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 187 (402)
T 2qjj_A 127 -----------DIAETVEAVG---HYI-----DMGYKAIRAQTGVPGIKDAYGVGRGKLYYEPADASLPSVTGWDTRKAL 187 (402)
T ss_dssp -----------SHHHHHHHHH---HHH-----HTTCSEEEEEECCTTCSSCTTCSSCSSCCCCCCBSSCCEEEECHHHHH
T ss_pred -----------CHHHHHHHHH---HHH-----HCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf -----------9899999999---999-----779736887527751012321343320136554556554566608889
Q ss_pred HHHHHHHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHH
Q ss_conf 99999997538531110234311046532027851111468656878999999987654486997767631042379988
Q gi|254780670|r 218 DLIANSIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKIL 297 (424)
Q Consensus 218 ~ll~eAi~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l 297 (424)
+...+.++.+.-..|.++.|.+|+. ...|.++-+.+.. .+++|.+.++|+|+..+|+++++++
T Consensus 188 ~~~~~~v~~ir~~~G~~~~l~vDaN----------------~~~~~~~Ai~~~~-~l~~~~l~wiEeP~~~~d~~~~~~l 250 (402)
T 2qjj_A 188 NYVPKLFEELRKTYGFDHHLLHDGH----------------HRYTPQEAANLGK-MLEPYQLFWLEDCTPAENQEAFRLV 250 (402)
T ss_dssp TTHHHHHHHHHHHHCSSSEEEEECT----------------TCSCHHHHHHHHH-HHGGGCCSEEESCSCCSSGGGGHHH
T ss_pred HHHHHHHHHHHHHCCCHHEEECCCC----------------CCCCHHHHHHHHH-HHHHCCCEEEECCCCCCCHHHHHHH
T ss_conf 9999999999987296013513422----------------3658999999998-6200166499768976588999999
Q ss_pred HHHCCCCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCH--HHHHH
Q ss_conf 6423883685043000021488852100386522342545300389999999999987986999507888723--58998
Q gi|254780670|r 298 TNKIGSNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETED--HTIAD 375 (424)
Q Consensus 298 ~~~~g~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD--~~iaD 375 (424)
.+..+- -|.+|. .+..+..+++.++.++++.+-+|+..+|-+|+++..+.+|+.+|..+.+..-..++.= ..-+|
T Consensus 251 ~~~~~i--pIa~gE-~~~~~~~~~~~i~~~a~di~~~d~~~~GGit~~~~ia~lA~~~gi~v~~h~~~~~s~i~~aa~~h 327 (402)
T 2qjj_A 251 RQHTVT--PLAVGE-IFNTIWDAKDLIQNQLIDYIRATVVGAGGLTHLRRIADLASLYQVRTGCHGATDLSPVTMGCALH 327 (402)
T ss_dssp HHHCCS--CEEECT-TCCSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCEECCCCCTTSCHHHHHHHHH
T ss_pred HHHCCC--CCCCCC-CHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHH
T ss_conf 861378--843785-20135556553004445357304666683999999999999859928874687527999999999
Q ss_pred HHHHHCC
Q ss_conf 9998199
Q gi|254780670|r 376 LAVATNC 382 (424)
Q Consensus 376 LAVg~~a 382 (424)
++.++..
T Consensus 328 ~~aa~~n 334 (402)
T 2qjj_A 328 FDTWVPN 334 (402)
T ss_dssp HHHHCTT
T ss_pred HHHHCCC
T ss_conf 9985778
No 12
>2pod_A Mandelate racemase / muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structure initiative, nysgrc; 2.34A {Burkholderia pseudomallei K96243}
Probab=99.86 E-value=7.9e-19 Score=158.15 Aligned_cols=326 Identities=15% Similarity=0.148 Sum_probs=215.8
Q ss_pred CEEEEEEEEEEEECCCCCE-EEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 9105899868860797842-999999848976766344786647754676268986516804899999998756789759
Q gi|254780670|r 1 MFINDIIAREVIDSRGSPT-IEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAFVNDEIRTALLG 79 (424)
Q Consensus 1 m~I~~i~~r~IlDSRG~PT-vEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~in~~i~~~L~g 79 (424)
|+|++|....+ ...|. |=|+|+|++|.+|.+-+..| -......+++.++|.|+|
T Consensus 3 mkIt~i~~~~~---~~~~~~~~V~i~Td~G~~G~GE~~~~----------------------~~~~~~~i~~~l~p~liG 57 (410)
T 2pod_A 3 LKITEIETLRP---EEFPNLLWVLVHTDEGITGLGETFYG----------------------ACSAEAYIHEWAANRLIG 57 (410)
T ss_dssp CCEEEEEEEEE---TTSTTEEEEEEEETTSCEEEEEEESC----------------------HHHHHHHHHHTTHHHHTT
T ss_pred EEEEEEEEEEE---CCCCCEEEEEEEECCCCEEEEECCCC----------------------HHHHHHHHHHHHHHHHCC
T ss_conf 18977899972---79788799999989998899850698----------------------678999999988998659
Q ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCCCC--CCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCCCC
Q ss_conf 8855789888646530366432212322--22024489987526634984888225324564754300000366455677
Q gi|254780670|r 80 CDARDQLLIDKIMIDLDGTPNKSRLGAN--AILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNILNGGIHADNA 157 (424)
Q Consensus 80 ~~~~dQ~~iD~~Li~lDgT~nks~lGaN--ailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~NiinGG~HA~~~ 157 (424)
+++.+.. +++..++.+......|.+ ++-|+.+|++-+.++..++|||++|+|..... +|..+.++++.+....
T Consensus 58 ~~~~~ie---~i~~~l~~~~~~~~~g~~~~A~said~AlwDl~gK~~g~Pl~~LLGG~~r~~--i~~yas~~~~~~~~~~ 132 (410)
T 2pod_A 58 EDPLQID---RHAKRLSGYLGFRSAGAEMRGNSALDIALWDIFGKATGQPIYQLLGGKCRDT--IRTYNTCAGPHYVRTA 132 (410)
T ss_dssp SCTTCHH---HHHHHTCCSSSTTTTCHHHHHHHHHHHHHHHHHHHHHTCBHHHHTTCCSCSC--EEEEEECCCCCC----
T ss_pred CCCCHHH---HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCE--EEEEEEECCCCCHHHH
T ss_conf 9822299---9999998642237774257899999999999999883997999836676671--5688980677410356
Q ss_pred CC--CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCC-----CCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 66--10256514887748999899999999999875200001---3676-----55764488684689999999999753
Q gi|254780670|r 158 LD--FQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYS---TNVG-----DEGGFSPNLKTADSALDLIANSIEKA 227 (424)
Q Consensus 158 l~--iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~---t~vg-----DEGGfap~~~~~eeaL~ll~eAi~~a 227 (424)
.. .+.++........+.+. ....+-+......+.++|+. ..++ ...+|.+.-.+.+..++.+...-+.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Gf~~~Ki~~~~~~~~~~~~~~~~~~~~~~di~~v~~iR~~- 210 (410)
T 2pod_A 133 KQQSVANWGLANSVSARYDDL-NAFLHRADELALDLLDSGITAMKIWPFDPYAEASDGYYISKSDLKRALEPFEKIRRA- 210 (410)
T ss_dssp ---------------CCCCHH-HHHHHCHHHHHHHHHHHTCCEEEECTTGGGSGGGTTSCCCHHHHHHHTHHHHHHHHH-
T ss_pred HHHHHHHHHHHHCCCCCHHHH-HHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH-
T ss_conf 777765543320221123259-999888789999999769886852256776544455556677899999999999998-
Q ss_pred CCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEEE
Q ss_conf 85311102343110465320278511114686568789999999876544869977676310423799886423883685
Q gi|254780670|r 228 GYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQL 307 (424)
Q Consensus 228 Gy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~I 307 (424)
.|.++.|.+|+.. -.+.++-+.+ .+.+++|++..+|+|+..+|++++++|+.+.+ +-|
T Consensus 211 ---~G~~~~l~~D~n~----------------~~~~~~A~~~-~~~l~~~~l~~~EeP~~~~d~~~~~~l~~~~~--~pI 268 (410)
T 2pod_A 211 ---VGDKMDVMVEFHS----------------LWNLPPALQI-AEALREYETFWHEDPIRMDSLSSLKRYAERSL--APV 268 (410)
T ss_dssp ---TGGGCEEEEECTT----------------CCCHHHHHHH-HHHHGGGTCSEEESCSCSSSGGGHHHHHHTCS--SCE
T ss_pred ---HCCCCHHHHHHCC----------------CCCHHHHHHH-HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCC--CCC
T ss_conf ---1865033443122----------------4898999999-98751123322468644221899999997227--986
Q ss_pred ECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCC
Q ss_conf 0430000214888521003865223425453003899999999999879869995078887235899899981998
Q gi|254780670|r 308 VGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVATNCG 383 (424)
Q Consensus 308 vGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~~a~ 383 (424)
.+|.. ++++..+...++.++++.+.+|+..+|.+|+++..+.+|+++|+.++. |-. ++.=.+.+.+.++...+
T Consensus 269 a~gE~-~~~~~~~~~~i~~~a~div~~d~~~~GGit~~~ki~~~A~~~gi~v~~-h~~-~~~i~~~a~~hl~aa~~ 341 (410)
T 2pod_A 269 CASET-LATRWGFRDLLETNAAGIVMLDISWCGGLSEARKIASMAEAWHLPVAP-HDC-TGPVVLTASTHLSLNAP 341 (410)
T ss_dssp EECTT-CCHHHHHHHHHHTTCEEEEEECTTTTTHHHHHHHHHHHHHHTTCCEEE-CCS-SCHHHHHHHHHHHHHCT
T ss_pred CCCCC-CCCHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEE-ECC-CCHHHHHHHHHHHHHCC
T ss_conf 46666-689999986404445778963674478589999999999986984998-578-74899999999999788
No 13
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=99.85 E-value=9.9e-19 Score=157.40 Aligned_cols=318 Identities=17% Similarity=0.135 Sum_probs=211.9
Q ss_pred CEEEEEEEEEEEE--CCCCCEEEEEEEECCCCEEEEEC-CCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 9105899868860--79784299999984897676634-47866477546762689865168048999999987567897
Q gi|254780670|r 1 MFINDIIAREVID--SRGSPTIEVDVCLEDGSTGRAMV-PSGASTGIHEAFELRDQEKRYFGKGVLKAIAFVNDEIRTAL 77 (424)
Q Consensus 1 m~I~~i~~r~IlD--SRG~PTvEvev~~~~g~~gra~~-PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~in~~i~~~L 77 (424)
|+|++|....+-- ..|+-+|=|+|.+++|..|.+-+ |+...+ ..++..+.+.++|.|
T Consensus 3 mKIt~i~~~~~~~p~~~~~~~vlV~i~td~G~~G~GE~~~~~~~~--------------------~~~~~~i~~~~~~~l 62 (403)
T 2ox4_A 3 LKITKIEIFHVHTRPQSGQRPILVKVSTDEGIYGLGEAGIAYGVG--------------------GSAAAGILKDYAALL 62 (403)
T ss_dssp CCEEEEEEEEECCCTTTCCCCEEEEEEETTSCEEEEEESCSSSSC--------------------HHHHHHHHHHHHHHH
T ss_pred CEECEEEEEEEECCCCCCCCEEEEEEEECCCCEEEEECCCCCCCC--------------------HHHHHHHHHHHHHHH
T ss_conf 444579999960898788517999999799998998432788876--------------------899999999999997
Q ss_pred CCCCHHHHHHHHHHHHHCC-CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCCC
Q ss_conf 5988557898886465303-664322123222202448998752663498488822532456475430000036645567
Q gi|254780670|r 78 LGCDARDQLLIDKIMIDLD-GTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNILNGGIHADN 156 (424)
Q Consensus 78 ~g~~~~dQ~~iD~~Li~lD-gT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~NiinGG~HA~~ 156 (424)
+|+|+.+...+-+.|.... ...........++-|+.+|++-+.++..++|||+.|++.....+|+..-++..+......
T Consensus 63 iG~d~~~i~~l~~~l~~~~~~~~~~~~~~~~a~said~AlwDl~gK~~~~Pv~~LLGg~~~~~i~~yas~~~~~~~~~~~ 142 (403)
T 2ox4_A 63 IGEDPFNTEAIWEKLFKKTFWGQGGGTVIFSGISAFDIAFWDIKGKALNLPVYKLLGGKNREDLRVYASQLQFGWGKERK 142 (403)
T ss_dssp TTCCTTCHHHHHHHHHHSSSGGGTCBHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCSSSSEEEEEECGGGCSSSSCC
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCEEEECCCCCCCCCC
T ss_conf 79981329999999998314127874278899999999999998887099714212896445664012100246564345
Q ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCC-------CCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 76610256514887748999899999999999875200001---3676-------5576448868468999999999975
Q gi|254780670|r 157 ALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYS---TNVG-------DEGGFSPNLKTADSALDLIANSIEK 226 (424)
Q Consensus 157 ~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~---t~vg-------DEGGfap~~~~~eeaL~ll~eAi~~ 226 (424)
...+..+..+. .++.+ ++|+. ..+| +++-|.+.... .+.++.-.+.++.
T Consensus 143 ------------~~~~~e~~~~~-------a~~~~-~~Gf~~~Kikvg~~~~~~~~~~~~~~~~~~-~~~~~~di~~i~a 201 (403)
T 2ox4_A 143 ------------SKGRKEEYAEE-------ALKAV-AEGYDAVKVDVLAHDRNGSREGVFLEGPLP-SETIKIGVERVEA 201 (403)
T ss_dssp ------------CCCSHHHHHHH-------HHHHH-HTTCSEEEECCSSSCTTSCCTTCCCSSSCC-HHHHHHHHHHHHH
T ss_pred ------------CCCCHHHHHHH-------HHHHH-HCCCCEEEEECCCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHH
T ss_conf ------------67999999999-------99988-559877985024577555433322346786-5679999999999
Q ss_pred CCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEE
Q ss_conf 38531110234311046532027851111468656878999999987654486997767631042379988642388368
Q gi|254780670|r 227 AGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQ 306 (424)
Q Consensus 227 aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~ 306 (424)
+.-..|.++.+.+|+ +.-.+.++-+.+...| ++|++..+|+|+..+|+++..++.+..+- -
T Consensus 202 ir~~~g~~~~l~~D~----------------n~~~~~~~A~~~~~~l-~~~~~~~~EeP~~~~d~~~~~~l~~~~~~--p 262 (403)
T 2ox4_A 202 IRNAVGPDVDIIVEN----------------HGHTDLVSAIQFAKAI-EEFNIFFYEEINTPLNPRLLKEAKKKIDI--P 262 (403)
T ss_dssp HHHHHCTTSEEEEEC----------------TTCSCHHHHHHHHHHH-GGGCEEEEECCSCTTSTHHHHHHHHTCCS--C
T ss_pred HHHHHCCCCCCCCCC----------------CCCCCHHHHHHHHHHH-HHCCCEEEEECCCCCCHHHHHHHHHCCCC--C
T ss_conf 999819720025555----------------5469999999999986-54086468835884488999999845589--7
Q ss_pred EECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHH--HHHHHHC
Q ss_conf 50430000214888521003865223425453003899999999999879869995078887235899--8999819
Q gi|254780670|r 307 LVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIA--DLAVATN 381 (424)
Q Consensus 307 IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~ia--DLAVg~~ 381 (424)
|.+|. .++++..+++.|+.++++.+.+|++.+|.+|++++.+.+|+.+|+.++ .|. .++.=.+.+ ||+.++.
T Consensus 263 Ia~gE-~~~~~~~~~~~i~~~a~d~~~~d~~~~GGit~~~~i~~~A~~~gi~i~-~h~-~~~~i~~aa~~hl~aa~~ 336 (403)
T 2ox4_A 263 LASGE-RIYSRWGFLPFLEDRSIDVIQPDLGTCGGFTEFKKIADMAHIFEVTVQ-AHV-AGTGVAEAASLHAEIAIP 336 (403)
T ss_dssp EEECT-TCCHHHHHHHHHHTTCCSEECCCHHHHTHHHHHHHHHHHHHHTTCEEC-CCC-CSCHHHHHHHHHHHHTCS
T ss_pred EECCC-CCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEE-ECC-CCCHHHHHHHHHHHHHCC
T ss_conf 74367-668999999999819863897567456865999999999998699798-679-984899999999999789
No 14
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens str} SCOP: c.1.11.2 d.54.1.1
Probab=99.83 E-value=4.3e-18 Score=152.67 Aligned_cols=304 Identities=19% Similarity=0.259 Sum_probs=206.8
Q ss_pred CEEEEEEEE-------EEEECCCC---------CEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHH
Q ss_conf 910589986-------88607978---------42999999848976766344786647754676268986516804899
Q gi|254780670|r 1 MFINDIIAR-------EVIDSRGS---------PTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLK 64 (424)
Q Consensus 1 m~I~~i~~r-------~IlDSRG~---------PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~ 64 (424)
|+|++|+.+ +.+++.|. +++-|+|.|++|..|.+.++.+.. +
T Consensus 1 m~I~~v~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~lV~i~t~~G~~G~Ge~~~~~~--------------------~-- 58 (382)
T 1rvk_A 1 MIITDVEVRVFRTTTRRHSDSAGHAHPGPAHQVEQAMLTVRTEDGQEGHSFTAPEIV--------------------R-- 58 (382)
T ss_dssp CBEEEEEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEEEETTSCEEEEEECGGGG--------------------C--
T ss_pred CEEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEECCHHH--------------------H--
T ss_conf 989899999998647875555455678876079999999998999889999582776--------------------9--
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCC
Q ss_conf 99999875678975988557898886465303664322123222202448998752663498488822532456475430
Q gi|254780670|r 65 AIAFVNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPL 144 (424)
Q Consensus 65 Av~~in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~ 144 (424)
...|++.++|.|+|+|+.+...+-+.|...- ......+..+++-|+.+|++-+.++..++|||+.|++... .+|.
T Consensus 59 -~~~i~~~~~~~liG~d~~~i~~l~~~l~~~~-~~~~~~~~~~a~said~AlwDl~gK~~~~Pv~~LLGg~~~---~~~~ 133 (382)
T 1rvk_A 59 -PHVIEKFVKKVLIGEDHRDRERLWQDLAHWQ-RGSAAQLTDRTLAVVDCALWDLAGRSLGQPVYKLIGGYRD---KVLA 133 (382)
T ss_dssp -HHHHHHTHHHHHTTSBTTCHHHHHHHHHHHH-TTTTTCSCHHHHHHHHHHHHHHHHHHHTCBHHHHHCCSCS---EEEE
T ss_pred -HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCC---CEEE
T ss_conf -9999999999867998142999999998751-1677514788999999999999998849929997489643---0123
Q ss_pred EEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCC-CCCCCCCCCHHHHHHHH
Q ss_conf 00003664556776610256514887748999899999999999875200001---367655-76448868468999999
Q gi|254780670|r 145 MNILNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYS---TNVGDE-GGFSPNLKTADSALDLI 220 (424)
Q Consensus 145 ~NiinGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~---t~vgDE-GGfap~~~~~eeaL~ll 220 (424)
...+..+.... .+..+-++..+.+ + .+.++|+. ..+|+. ..+.++ .++-++.+
T Consensus 134 ~~~~~~~~~~~------------~~~~~~e~~~~~a-------~-~~~~~Gf~~~K~k~g~~~~~~~~~---~~~d~~~v 190 (382)
T 1rvk_A 134 YGSIMCGDELE------------GGLATPEDYGRFA-------E-TLVKRGYKGIKLHTWMPPVSWAPD---VKMDLKAC 190 (382)
T ss_dssp EEEECCCCCCT------------TTTSSHHHHHHHH-------H-HHHHHTCSEEEEECCCTTSTTCCC---HHHHHHHH
T ss_pred EEEEECCCCCC------------CCCCCHHHHHHHH-------H-HHHHCCCCEECCCCCCCCCCCCCH---HHHHHHHH
T ss_conf 56774066431------------3558999999999-------9-998718651434334565544410---78999999
Q ss_pred HHHHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHH
Q ss_conf 99997538531110234311046532027851111468656878999999987654486997767631042379988642
Q gi|254780670|r 221 ANSIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNK 300 (424)
Q Consensus 221 ~eAi~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~ 300 (424)
+++.++ .|.++.|.+|+. ...+.++-+.+... +++|++.++|||+..+|++++.+++++
T Consensus 191 -~~ir~~---~g~~~~l~~D~n----------------~~~~~~~A~~~~~~-L~~~~l~wiEeP~~~~d~~~~~~l~~~ 249 (382)
T 1rvk_A 191 -AAVREA---VGPDIRLMIDAF----------------HWYSRTDALALGRG-LEKLGFDWIEEPMDEQSLSSYKWLSDN 249 (382)
T ss_dssp -HHHHHH---HCTTSEEEEECC----------------TTCCHHHHHHHHHH-HHTTTCSEEECCSCTTCHHHHHHHHHH
T ss_pred -HHHHHH---HCCCCEEECCCC----------------CCCCCHHHHHHHHH-HHHCCCCCEECCCCCCCHHHHHHHHHH
T ss_conf -999998---497222411432----------------13451689999999-753087602178984478999999976
Q ss_pred CCCCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHH
Q ss_conf 38836850430000214888521003865223425453003899999999999879869995078887235899899981
Q gi|254780670|r 301 IGSNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVAT 380 (424)
Q Consensus 301 ~g~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~ 380 (424)
++ +-|++|.-..+......+.++.++++.+.+|+..+|.+|++++.+.+|+++|+.+++. .+ | ..-+||+.++
T Consensus 250 ~~--~pi~~gE~~~~~~~~~~~~i~~~a~di~~~d~~~~GGit~~~~ia~~A~~~g~~~~~h-~~--~--~~~~hl~aa~ 322 (382)
T 1rvk_A 250 LD--IPVVGPESAAGKHWHRAEWIKAGACDILRTGVNDVGGITPALKTMHLAEAFGMECEVH-GN--T--AMNLHVVAAT 322 (382)
T ss_dssp CS--SCEEECSSCSSHHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEEC-CC--S--HHHHHHHHHC
T ss_pred CC--CCCCCCCEECCCCHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEC-CH--H--HHHHHHHHHH
T ss_conf 79--9844671210440256799864876203466241797169999999999869978657-78--9--9999999982
Q ss_pred CC
Q ss_conf 99
Q gi|254780670|r 381 NC 382 (424)
Q Consensus 381 ~a 382 (424)
..
T Consensus 323 ~~ 324 (382)
T 1rvk_A 323 KN 324 (382)
T ss_dssp SS
T ss_pred HH
T ss_conf 54
No 15
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiative, PSI-2; 2.00A {Salmonella typhimurium LT2}
Probab=99.83 E-value=8.3e-18 Score=150.56 Aligned_cols=322 Identities=15% Similarity=0.142 Sum_probs=205.9
Q ss_pred CEEEEEEEEEEEECC-----CCCEEEEEEEECCCCEEEEEC-CCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 910589986886079-----784299999984897676634-47866477546762689865168048999999987567
Q gi|254780670|r 1 MFINDIIAREVIDSR-----GSPTIEVDVCLEDGSTGRAMV-PSGASTGIHEAFELRDQEKRYFGKGVLKAIAFVNDEIR 74 (424)
Q Consensus 1 m~I~~i~~r~IlDSR-----G~PTvEvev~~~~g~~gra~~-PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~in~~i~ 74 (424)
|+|++|....+-... ..++|=|+|.|++|..|.+-+ |+... -..++..+.+.++
T Consensus 4 mkIt~i~~~~~~~~~~~~~~~~~~vlV~I~td~G~~G~GE~~~~~~~--------------------~~~~~~~~~~~l~ 63 (407)
T 2o56_A 4 MKITSVDIIDVANDFASATSKWRPVVVKINTDEGISGFGEVGLAYGV--------------------GASAGIGMAKDLS 63 (407)
T ss_dssp CCEEEEEEEECCCCC-----CCCCEEEEEEETTSCEEEEEESCSSSS--------------------CHHHHHHHHHHHH
T ss_pred CCCCEEEEEEECCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCC--------------------CHHHHHHHHHHHH
T ss_conf 60236889981477667888755699999989999899972078887--------------------4899999999999
Q ss_pred HHHCCCCHHHHHHHHHHHHHCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEECCCCCC
Q ss_conf 89759885578988864653036643-22123222202448998752663498488822532456475430000036645
Q gi|254780670|r 75 TALLGCDARDQLLIDKIMIDLDGTPN-KSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNILNGGIH 153 (424)
Q Consensus 75 ~~L~g~~~~dQ~~iD~~Li~lDgT~n-ks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~NiinGG~H 153 (424)
|.|+|+|+.|...|-+.|....-..+ ...+..+++-|+.+|++-+.++..++|||++|++.....+|+-.-.. .-+..
T Consensus 64 p~liG~d~~di~~i~~~l~~~~~~~~~~~g~~~~A~said~AlwDl~gK~~~~Pl~~LLGg~~r~~i~~yas~~-~~~~~ 142 (407)
T 2o56_A 64 AIIIGMDPMNNEAIWEKMLKKTFWGQGGGGIFSAAMSGIDIALWDIKGKAWGVPLYKMLGGKSREKIRTYASQL-QFGWG 142 (407)
T ss_dssp HHHTTSCTTCHHHHHHHHHHSSSGGGGCBHHHHHHHHHHHHHHHHHHHHHHTCBHHHHTTCCSCSSEEEEEECG-GGCCS
T ss_pred HHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEEE-CCCCC
T ss_conf 98679996569999999997412246764178899999999999999987099842215886457775168762-23467
Q ss_pred CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCC---CCCCC---CCCCCHHHHHHHHHHHH
Q ss_conf 56776610256514887748999899999999999875200001---36765---57644---88684689999999999
Q gi|254780670|r 154 ADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYS---TNVGD---EGGFS---PNLKTADSALDLIANSI 224 (424)
Q Consensus 154 A~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~---t~vgD---EGGfa---p~~~~~eeaL~ll~eAi 224 (424)
.+ ...+.+ .+-++..+.+ .+.. ++|+. ..+|. .++|. ......++-++.-.+.+
T Consensus 143 ~~---~~~~~~------~~~e~~~~~~---~~~~-----~~Gf~~~Kik~g~~~~~~~~~~~~~~~~~~~~~i~~d~~~i 205 (407)
T 2o56_A 143 DG---SDKDML------TEPEQYAQAA---LTAV-----SEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRM 205 (407)
T ss_dssp TT---CTTCCC------CSHHHHHHHH---HHHH-----HTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHH
T ss_pred CC---CHHHHH------CCHHHHHHHH---HHHH-----HCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 77---514432------0999999999---9998-----66976464134446655651000146653178999999999
Q ss_pred HHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCC
Q ss_conf 75385311102343110465320278511114686568789999999876544869977676310423799886423883
Q gi|254780670|r 225 EKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSN 304 (424)
Q Consensus 225 ~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~ 304 (424)
+.+.-..|.|+.+.+|+- .-.+.++-+.+... +++|++.++|+|+..+||++.++|.++.+
T Consensus 206 ~air~~~G~d~~l~~Dan----------------~~~~~~~A~~~~~~-l~~~~~~wiEeP~~~~d~~~~~~l~~~~~-- 266 (407)
T 2o56_A 206 AAIRDAVGPDVDIIAEMH----------------AFTDTTSAIQFGRM-IEELGIFYYEEPVMPLNPAQMKQVADKVN-- 266 (407)
T ss_dssp HHHHHHHCTTSEEEEECT----------------TCSCHHHHHHHHHH-HGGGCCSCEECSSCSSSHHHHHHHHHHCC--
T ss_pred HHHHHHCCCCCCCCCCCC----------------CCCCHHHHHHHHHH-HCCCCCEEEECCCCHHHHHHHHHHHHHCC--
T ss_conf 999985199766246666----------------67789999999998-52436704414687777779999997389--
Q ss_pred EEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCH--HHHHHHHHHHCC
Q ss_conf 685043000021488852100386522342545300389999999999987986999507888723--589989998199
Q gi|254780670|r 305 CQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETED--HTIADLAVATNC 382 (424)
Q Consensus 305 ~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD--~~iaDLAVg~~a 382 (424)
+-|.+|. -++++.-+++.|+.++++.+-+|+..+|.+|++++.+.+|+++|+.+++ |..| +-= ..-+||+-++..
T Consensus 267 ipIa~gE-~~~~~~~~~~~i~~~a~di~~~d~~~~GGit~~~~ia~~A~~~gi~v~~-h~~~-~~i~~~a~~hl~aa~~~ 343 (407)
T 2o56_A 267 IPLAAGE-RIYWRWGYRPFLENGSLSVIQPDICTCGGITEVKKICDMAHVYDKTVQI-HVCG-GPISTAVALHMETAIPN 343 (407)
T ss_dssp SCEEECT-TCCHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEECC-CCCS-CHHHHHHHHHHHHHCTT
T ss_pred CCCCCCC-CCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEE-CCCC-CHHHHHHHHHHHHHCCC
T ss_conf 9951687-7589999999998499787986787079889999999999986992886-6898-68999999999997788
No 16
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small molecule metabolism, PSI-II, NYSGXRC, structural genomics; 1.95A {Sinorhizobium meliloti 1021}
Probab=99.82 E-value=2.3e-17 Score=147.30 Aligned_cols=299 Identities=19% Similarity=0.212 Sum_probs=196.6
Q ss_pred CEEEEEEEEEE--------EECCCC----CEEEEEEEECCCCEEEEEC-CCCCCCCCCEEEEECCCCCCCCCCHHHHHHH
Q ss_conf 91058998688--------607978----4299999984897676634-4786647754676268986516804899999
Q gi|254780670|r 1 MFINDIIAREV--------IDSRGS----PTIEVDVCLEDGSTGRAMV-PSGASTGIHEAFELRDQEKRYFGKGVLKAIA 67 (424)
Q Consensus 1 m~I~~i~~r~I--------lDSRG~----PTvEvev~~~~g~~gra~~-PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~ 67 (424)
|+|++|..+.+ -+|+|. +.+-|+|++++|..|.+-+ |+...+ .+.
T Consensus 4 mkI~~i~~~~~~~Pl~~p~~~s~~~~~~~~~~lV~v~t~~G~~G~GE~~~~~~~~----------------------~~~ 61 (384)
T 2pgw_A 4 VKISNVRVRPLVLPLKQPYHWSYGIRESFAVNLIEIEADDGTVGIGECTVAPDQT----------------------GTA 61 (384)
T ss_dssp CCEEEEEEEEEEEEEEEEEECSSSEEEEEEEEEEEEEETTSCEEEEEEECTTCHH----------------------HHH
T ss_pred CEEEEEEEEEEEEECCCCEECCCEEEEEEEEEEEEEEECCCCEEEEEEECCCCCH----------------------HHH
T ss_conf 8776699999998367875887858998899999999899999999723888606----------------------799
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHCCC---CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCC
Q ss_conf 998756789759885578988864653036---64322123222202448998752663498488822532456475430
Q gi|254780670|r 68 FVNDEIRTALLGCDARDQLLIDKIMIDLDG---TPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPL 144 (424)
Q Consensus 68 ~in~~i~~~L~g~~~~dQ~~iD~~Li~lDg---T~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~ 144 (424)
.+.+.++|.|+|+++.+...+-+.|..-.- ..+.......++.|+.+|++-+.++..++|||+.|++......|+..
T Consensus 62 ~~~~~l~~~liG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~said~AlwDl~gK~~~~pl~~llgg~~~~~~~~~~ 141 (384)
T 2pgw_A 62 AILYRLAKHLVGHSPHDVAPLIARIFHQEYLGHGANIMRAANQIFSGIDMAMWDLQGKLAGLPVHQLLGGAHRKAVGYFY 141 (384)
T ss_dssp HHHHHHHGGGTTSCGGGHHHHHHHHHHHHTGGGTCCCHHHHHHHHHHHHHHHHHHHHHHHTSBGGGTTTCCSSSEEEBCE
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCEEE
T ss_conf 99999999873998779999999976522015552034578999999999999999873699830036885433332011
Q ss_pred EEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 00003664556776610256514887748999899999999999875200001367655764488684689999999999
Q gi|254780670|r 145 MNILNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYSTNVGDEGGFSPNLKTADSALDLIANSI 224 (424)
Q Consensus 145 ~NiinGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t~vgDEGGfap~~~~~eeaL~ll~eAi 224 (424)
.+.+ .+..+....... ..++++.... --+ ....++-...+ +++
T Consensus 142 --~~~~--------------------~~~~~~~~~~~~--------~~~~g~~~~k-~~~-----~~~~~~d~~~~-~~i 184 (384)
T 2pgw_A 142 --FLQG--------------------ETAEELARDAAV--------GHAQGERVFY-LKV-----GRGEKLDLEIT-AAV 184 (384)
T ss_dssp --ECCC--------------------SSHHHHHHHHHH--------HHHTTCCEEE-EEC-----CSCHHHHHHHH-HHH
T ss_pred --ECCC--------------------CCHHHHHHHHHH--------HHHCCCCEEE-CCC-----CCCHHHHHHHH-HHH
T ss_conf --0246--------------------652668999999--------8742663021-146-----78757789999-999
Q ss_pred HHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCC
Q ss_conf 75385311102343110465320278511114686568789999999876544869977676310423799886423883
Q gi|254780670|r 225 EKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSN 304 (424)
Q Consensus 225 ~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~ 304 (424)
.++ .| |+.|.+|+ +.-++.++-+++... +++|+|.+||+|+..+||+++.+|.++.+
T Consensus 185 r~~---~g-d~~l~vDa----------------N~~~~~~~A~~~~~~-l~~~~i~~iEeP~~~~d~~~~~~l~~~~~-- 241 (384)
T 2pgw_A 185 RGE---IG-DARLRLDA----------------NEGWSVHDAINMCRK-LEKYDIEFIEQPTVSWSIPAMAHVREKVG-- 241 (384)
T ss_dssp HTT---ST-TCEEEEEC----------------TTCCCHHHHHHHHHH-HGGGCCSEEECCSCTTCHHHHHHHHHHCS--
T ss_pred HHH---CC-CCEEEEEC----------------CCCCCHHHHHHHHHH-HHHCCCCCCCCCCCCCCHHHHHHHHHCCC--
T ss_conf 987---79-92799845----------------458999999999998-42239850017777546567788874268--
Q ss_pred EEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCC
Q ss_conf 6850430000214888521003865223425453003899999999999879869995078887235899899981998
Q gi|254780670|r 305 CQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVATNCG 383 (424)
Q Consensus 305 ~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~~a~ 383 (424)
+.|..|.- ++++..+++.++.++++.+.+||..+|.+|++++.+++|+.+|..+++ |..-|+.=...+.+.++...+
T Consensus 242 ipia~dEs-~~~~~~~~~~~~~~a~d~v~~d~~~~GGit~~~~i~~~a~~~gi~~~~-h~~~~~~i~~~a~~h~a~a~p 318 (384)
T 2pgw_A 242 IPIVADQA-AFTLYDVYEICRQRAADMICIGPREIGGIQPMMKAAAVAEAAGLKICI-HSSFTTGITTCAEHHIGLAIP 318 (384)
T ss_dssp SCEEESTT-CCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEE-CCCSCCHHHHHHHHHHHHHCS
T ss_pred CCEECCCC-CCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEE-CCCCCCHHHHHHHHHHHHHCC
T ss_conf 77764765-578899999986467665885434568789999999999754974986-588775899999999999779
No 17
>2poz_A Putative dehydratase; octamer, structural genomics, PSI-2, protein structure initiative; 2.04A {Mesorhizobium loti MAFF303099}
Probab=99.81 E-value=1.4e-17 Score=148.85 Aligned_cols=315 Identities=16% Similarity=0.140 Sum_probs=203.7
Q ss_pred CEEEEEEEEEEEECCCCCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf 91058998688607978429999998489767663447866477546762689865168048999999987567897598
Q gi|254780670|r 1 MFINDIIAREVIDSRGSPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAFVNDEIRTALLGC 80 (424)
Q Consensus 1 m~I~~i~~r~IlDSRG~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~in~~i~~~L~g~ 80 (424)
|+|++|....+=-.|-. +|=|+|.|++|.+|.+-++...+ + +-......+++.++|.|+|+
T Consensus 3 mKi~~i~~~~~~~~~~~-~viV~i~t~~G~~G~GE~~~~~~---------------~---~~~~~~~~i~~~~~p~liG~ 63 (392)
T 2poz_A 3 LKITGVNIYLLKSGRLH-PVLVEISTDEGITGAGEAGIAYG---------------V---GGTAAAGMIKDLSERFLIGK 63 (392)
T ss_dssp CCEEEEEEEECCBTTBC-CEEEEEEETTSCCEEEEESCSSS---------------S---CHHHHHHHHHHHHHHHTTTC
T ss_pred CEEEEEEEEEECCCCEE-EEEEEEEECCCCEEEEEEECCCC---------------C---CHHHHHHHHHHHHHHHHCCC
T ss_conf 16938999997889843-69999997999989996407888---------------7---78999999999878874699
Q ss_pred CHHHHHHHHHHHHHCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCC
Q ss_conf 855789888646530366-4322123222202448998752663498488822532456475430000036645567766
Q gi|254780670|r 81 DARDQLLIDKIMIDLDGT-PNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNILNGGIHADNALD 159 (424)
Q Consensus 81 ~~~dQ~~iD~~Li~lDgT-~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~NiinGG~HA~~~l~ 159 (424)
++.+...+-+.|.+..-. .+...+-..++-|+.+|++-+.++..++|||+.|++......|++..+...
T Consensus 64 d~~~ie~l~~~l~~~~~~~~~~~~~~~~a~sAid~AlwDl~gK~~~~pv~~LLgg~~~~~~~~~~~~~~~---------- 133 (392)
T 2poz_A 64 DPSRIEELWSTMYDHSFWAKNGGAIIFAGISAIEQALWDIKGKCLGVPVYELFGGKIRDRVRAYANGWYG---------- 133 (392)
T ss_dssp CTTCHHHHHHHHHHHSSTTTTCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCSCSEEEEEECSCCT----------
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEHHCCCCCCCCCEEEECCCCC----------
T ss_conf 8678999999999831220367337788899999999999999849980022588656643023202346----------
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCC---CCCCC----CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf 1025651488774899989999999999987520000---13676----5576448868468999999999975385311
Q gi|254780670|r 160 FQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGY---STNVG----DEGGFSPNLKTADSALDLIANSIEKAGYNAG 232 (424)
Q Consensus 160 iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~---~t~vg----DEGGfap~~~~~eeaL~ll~eAi~~aGy~~g 232 (424)
...+-.+..+.. -..++.-...-++ ...+. +...+.+...+.++.++.+.. +.+ ..|
T Consensus 134 ---------~~~~~~~~~~~~---~~~~~~g~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~v~~-ir~---~~g 197 (392)
T 2poz_A 134 ---------AADTPDEFARAV---ERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKA-VRD---AAG 197 (392)
T ss_dssp ---------TCCSHHHHHHHT---HHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHH-HHH---HHC
T ss_pred ---------CCCCHHHHHHHH---HHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-HHH---HHC
T ss_conf ---------789989999999---9999706562204321312566533344455763659999999999-999---859
Q ss_pred CCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCE
Q ss_conf 10234311046532027851111468656878999999987654486997767631042379988642388368504300
Q gi|254780670|r 233 KDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQLVGDDL 312 (424)
Q Consensus 233 ~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~IvGDDL 312 (424)
.++.|.+|+. ...+.++-+.+.. .+++|.+..+|+|+..+|+++++++.++.+ +-|.+|.
T Consensus 198 ~~~~l~vDaN----------------~~~~~~~A~~~~~-~l~~~~l~wiEeP~~~~~~~~~~~l~~~~~--ipIa~gE- 257 (392)
T 2poz_A 198 PEIELMVDLS----------------GGLTTDETIRFCR-KIGELDICFVEEPCDPFDNGALKVISEQIP--LPIAVGE- 257 (392)
T ss_dssp TTSEEEEECT----------------TCSCHHHHHHHHH-HHGGGCEEEEECCSCTTCHHHHHHHHHHCS--SCEEECT-
T ss_pred CCCEEECCCC----------------CCCCHHHHHHHHH-HHCCCCCCEEECCCCCCCHHHHHHHHCCCC--CCCCCCC-
T ss_conf 9846713623----------------4699899999987-530048858966899889688523411579--8852787-
Q ss_pred EECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHH--HHHHHHCC
Q ss_conf 00214888521003865223425453003899999999999879869995078887235899--89998199
Q gi|254780670|r 313 FVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIA--DLAVATNC 382 (424)
Q Consensus 313 ~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~ia--DLAVg~~a 382 (424)
-++++..+++.++.++++.+.+|+..+|.+|++++.+++|+++|+.+++ |..| +.-...+ ||+-++..
T Consensus 258 ~~~~~~~~~~~i~~~a~d~i~~d~~~~GGi~~~~~i~~~a~~~g~~~~~-h~~~-~~i~~~a~~hl~aa~~~ 327 (392)
T 2poz_A 258 RVYTRFGFRKIFELQACGIIQPDIGTAGGLMETKKICAMAEAYNMRVAP-HVCG-SSLIETATLQLEANITN 327 (392)
T ss_dssp TCCHHHHHHHHHTTTCCSEECCCTTTSSCHHHHHHHHHHHHTTTCEECC-CCCS-SHHHHHHHHHHHHHCTT
T ss_pred CCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEE-ECCC-CHHHHHHHHHHHHHCCC
T ss_conf 6679999999998089876984535578816999999999986986987-4798-48999999999986867
No 18
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=99.81 E-value=3.1e-16 Score=138.90 Aligned_cols=306 Identities=18% Similarity=0.223 Sum_probs=208.9
Q ss_pred CEEEEEEEEEEEECCCCC----EEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 910589986886079784----2999999848976766344786647754676268986516804899999998756789
Q gi|254780670|r 1 MFINDIIAREVIDSRGSP----TIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAFVNDEIRTA 76 (424)
Q Consensus 1 m~I~~i~~r~IlDSRG~P----TvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~in~~i~~~ 76 (424)
|+|++|..+.+--.+-+| +|-|+|++++|..|.+-+.+.......+. .+..+.+.+.|.
T Consensus 1 MKI~~i~~~~~~~pl~~~~~~~~vlV~v~t~~G~~G~GE~~~~~~~~~~~~-----------------~~~~~~~~l~~~ 63 (391)
T 3gd6_A 1 MKITDLELHAVGIPRHTGFVNKHVIVKIHTDEGLTGIGEMSDFSHLPLYSV-----------------DLHDLKQGLLSI 63 (391)
T ss_dssp CCEEEEEEEEEEEEBTTSCEEEEEEEEEEETTSCEEEEEECCCSSSSSCCC-----------------CHHHHHHHHHHH
T ss_pred CEEEEEEEEEECCCCCCCCEEEEEEEEEEECCCCEEEEEECCCCCCCCHHH-----------------HHHHHHHHHHHH
T ss_conf 986799999975788888250139999998999989986158888863479-----------------999999999999
Q ss_pred HCCCCHHHHHHHHHHHHHC-CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCC
Q ss_conf 7598855789888646530-366432212322220244899875266349848882253245647543000003664556
Q gi|254780670|r 77 LLGCDARDQLLIDKIMIDL-DGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNILNGGIHAD 155 (424)
Q Consensus 77 L~g~~~~dQ~~iD~~Li~l-DgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~NiinGG~HA~ 155 (424)
|+|+++.+...+.+.|.+. .........+..++.|+.+|++-+.++..++|||+.|++.....+|+... +.++
T Consensus 64 liG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~said~AlwDl~gK~~~~Pl~~lLgg~~~~~i~~~~~--~~~~---- 137 (391)
T 3gd6_A 64 LLGQNPFDLMKINKELTDNFPETMYYYEKGSFIRNGIDNALHDLCAKYLDISVSDFLGGRVKEKIKVCYP--IFRH---- 137 (391)
T ss_dssp HTTCCTTCHHHHHHHHHHHSCCCSCTTCHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCSCSEEEBCEE--ECCC----
T ss_pred HCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCEEEEEEE--CCCC----
T ss_conf 7599867899999999874233104455248999999999999975041897121036876651356530--1367----
Q ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf 776610256514887748999899999999999875200001---36765576448868468999999999975385311
Q gi|254780670|r 156 NALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYS---TNVGDEGGFSPNLKTADSALDLIANSIEKAGYNAG 232 (424)
Q Consensus 156 ~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~---t~vgDEGGfap~~~~~eeaL~ll~eAi~~aGy~~g 232 (424)
....+..+.. + .+++.+ ++|+. ..+|. +.++.++.+...-+..|
T Consensus 138 ------------~~~~~~~~~~----~---~~~~~~-~~Gf~~~Kikig~---------~~~~d~~~i~~ir~~~g---- 184 (391)
T 3gd6_A 138 ------------RFSEEVESNL----D---VVRQKL-EQGFDVFRLYVGK---------NLDADEEFLSRVKEEFG---- 184 (391)
T ss_dssp ------------SSTTHHHHHH----H---HHHHHH-HTTCCEEEEECSS---------CHHHHHHHHHHHHHHHG----
T ss_pred ------------CCCHHHHHHH----H---HHHHHH-HCCCCCCCCCCCC---------CHHHHHHHHHHHHHHCC----
T ss_conf ------------6302158999----9---999998-6698520167789---------87899999999997648----
Q ss_pred CCH-HHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHC--CEEEEECCCCCCCHHHHHHHHHHCCCCEEEEC
Q ss_conf 102-343110465320278511114686568789999999876544--86997767631042379988642388368504
Q gi|254780670|r 233 KDL-LIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQY--PIYSIEDGMSEDDWHGWKILTNKIGSNCQLVG 309 (424)
Q Consensus 233 ~di-~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~y--PI~sIEDP~~e~D~~gw~~l~~~~g~~~~IvG 309 (424)
.++ .+.+|+ +...+.++-+++...| ++| .+.+||+|+..+||++..++....+ +-|
T Consensus 185 ~~~~~l~~Da----------------n~~~~~~~A~~~~~~l-~~~d~~l~~iEeP~~~~d~~~l~~l~~~~~--ipi-- 243 (391)
T 3gd6_A 185 SRVRIKSYDF----------------SHLLNWKDAHRAIKRL-TKYDLGLEMIESPAPRNDFDGLYQLRLKTD--YPI-- 243 (391)
T ss_dssp GGCEEEEEEC----------------TTCSCHHHHHHHHHHH-TTCCSSCCEEECCSCTTCHHHHHHHHHHCS--SCE--
T ss_pred CCCEEEEECC----------------CCCCCHHHHHHHHHHH-HHHCCCCCCCCCCCCCHHHHHHHHHHHCCC--CCC--
T ss_conf 6400565311----------------0247889999999999-860456401468887001788887632268--874--
Q ss_pred CCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCHH
Q ss_conf 3000021488852100386522342545300389999999999987986999507888723589989998199801
Q gi|254780670|r 310 DDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVATNCGQI 385 (424)
Q Consensus 310 DDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~~a~~i 385 (424)
|-..+...-+++.++.++++.+.+|+..+|.+|++++.+++|+.+|..+++++ ..|+.=.+.+.+.++.....+
T Consensus 244 -~E~~~~~~~~~~~i~~~~~di~~~d~~~~GGit~~~~i~~~A~~~gi~~~~~~-~~~~~i~~aa~~hlaa~~~~~ 317 (391)
T 3gd6_A 244 -SEHVWSFKQQQEMIKKDAIDIFNISPVFIGGLTSAKKAAYAAEVASKDVVLGT-TQELSVGTAAMAHLGCSLTNI 317 (391)
T ss_dssp -EEECCCHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC-CCCCHHHHHHHHHHHTTCSSC
T ss_pred -CCCCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECC-CCCCHHHHHHHHHHHHHCCCC
T ss_conf -23432104589887558775998567347866999999999998598261379-987679999999999866576
No 19
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens pf-5} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=99.81 E-value=2e-16 Score=140.28 Aligned_cols=302 Identities=17% Similarity=0.106 Sum_probs=207.6
Q ss_pred CEEEEEEEEE--------EEECCCC----CEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHH
Q ss_conf 9105899868--------8607978----429999998489767663447866477546762689865168048999999
Q gi|254780670|r 1 MFINDIIARE--------VIDSRGS----PTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAF 68 (424)
Q Consensus 1 m~I~~i~~r~--------IlDSRG~----PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~ 68 (424)
++|++|..+. +-.|.|. +.|-|+|.+++|..|.+-++..-. ..|.+.+.......
T Consensus 6 ~~I~~ie~~~~~~Pl~~p~~~s~~~~~~~~~vlv~i~t~~G~~G~GE~~~~~~-------------~~~~~e~~~~~~~~ 72 (382)
T 3dgb_A 6 SAIESIETIIVDLPTIRPHKLAMHTMQNQTLVLIRLRCADGIEGLGESTTIGG-------------LAYGNESPDSIKTN 72 (382)
T ss_dssp TBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEEECSTT-------------TTSSSCCHHHHHHH
T ss_pred CEEEEEEEEEEECCCCCCEECCCEEEEEEEEEEEEEEECCCCEEEEECCCCCC-------------CCCCCCCHHHHHHH
T ss_conf 85537999999677688668878799889999999998999989985205788-------------65576689999999
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEEC
Q ss_conf 98756789759885578988864653036643221232222024489987526634984888225324564754300000
Q gi|254780670|r 69 VNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNIL 148 (424)
Q Consensus 69 in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~Nii 148 (424)
+++.++|.|+|+++.+...+-..|... ...+.-++.|+.+|++.+.|+..++|||+.|++......|+......
T Consensus 73 i~~~l~p~lig~d~~~~~~~~~~~~~~------~~~~~~a~said~AlwDl~~K~~~~Pl~~llgg~~~~~~~~~~~~~~ 146 (382)
T 3dgb_A 73 IDRFVAPLLIGQDASNINAAMLRLEQS------IRGNTFAKSGIESALLDAQGKRLGLPVSELLGGRVRDALPVAWTLAS 146 (382)
T ss_dssp HHHTHHHHHTTSBTTCHHHHHHHHHHH------CCSCHHHHHHHHHHHHHHHHHHHTCBHHHHTTCCSCSEEEBCEEECS
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCC
T ss_conf 999888986289877899999999863------45678999999999999998772998889648864445554222234
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC---CCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 36645567766102565148877489998999999999998752000013---676557644886846899999999997
Q gi|254780670|r 149 NGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYST---NVGDEGGFSPNLKTADSALDLIANSIE 225 (424)
Q Consensus 149 nGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t---~vgDEGGfap~~~~~eeaL~ll~eAi~ 225 (424)
....+.+ ....+.+...|+.+ .+| ..+.++-++.+....+
T Consensus 147 ----------------------~~~~~~~-------~~~~~~~~~~g~~~~K~K~g--------~~~~~~d~~~i~~ir~ 189 (382)
T 3dgb_A 147 ----------------------GDTAKDI-------AEAQKMLDLRRHRIFKLKIG--------AGEVDRDLAHVIAIKK 189 (382)
T ss_dssp ----------------------SCHHHHH-------HHHHHHHHTTSCSEEEEECC--------SSCHHHHHHHHHHHHH
T ss_pred ----------------------CCCCHHH-------HHHHHHHHCCCCCCCCCCCC--------CCCHHHHHHHHHHHHH
T ss_conf ----------------------6631359-------99999742024554455779--------9899999999999998
Q ss_pred HCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCE
Q ss_conf 53853111023431104653202785111146865687899999998765448699776763104237998864238836
Q gi|254780670|r 226 KAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNC 305 (424)
Q Consensus 226 ~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~ 305 (424)
.. |.++.|.+|+.. .++.++.+++... +++|++.+||+|+..+||+++.+|.+..+ +
T Consensus 190 ~~----g~~~~l~vDaN~----------------~~~~~~A~~~~~~-l~~~~~~~iEeP~~~~~~~~~~~l~~~~~--i 246 (382)
T 3dgb_A 190 AL----GDSASVRVDVNQ----------------AWDEAVALRACRI-LGGNGIDLIEQPISRNNRAGMVRLNASSP--A 246 (382)
T ss_dssp HH----GGGSEEEEECTT----------------CBCHHHHHHHHHH-HHTTTCCCEECCBCTTCHHHHHHHHHHCS--S
T ss_pred HC----CCCCEEEECHHH----------------CCCHHHHHHHHHH-HHHHCCCCEECCCCCCCHHHHHHHHHHCC--C
T ss_conf 63----977559863132----------------2576889999998-53221344106889789899878986089--9
Q ss_pred EEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCC
Q ss_conf 850430000214888521003865223425453003899999999999879869995078887235899899981998
Q gi|254780670|r 306 QLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVATNCG 383 (424)
Q Consensus 306 ~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~~a~ 383 (424)
-|..|.-. ..+.-+.+.++.++++.+.+||..+|.+|++++.+.+|+++|..+++++-. |+.=...|-+-++...+
T Consensus 247 pia~~E~~-~~~~~~~~~i~~~a~d~i~~d~~~~GGit~~~~~~~~a~~~gi~~~~~~~~-~~~i~~~a~~h~~~~~~ 322 (382)
T 3dgb_A 247 PIMADESI-ECVEDAFNLAREGAASVFALKIAKNGGPRATLRTAAIAEAAGIGLYGGTML-EGGIGTLASAHAFLTLN 322 (382)
T ss_dssp CEEESTTC-SSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECCSC-CCHHHHHHHHHHHTTSS
T ss_pred CCCCCCCC-CCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCC-CCHHHHHHHHHHHHHCC
T ss_conf 75178541-356777788765875399735544587999999999999869939978874-14899999999999678
No 20
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=99.81 E-value=3.1e-16 Score=138.99 Aligned_cols=304 Identities=17% Similarity=0.096 Sum_probs=208.8
Q ss_pred CEEEEEEEEEEEE--------C----CCCCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHH
Q ss_conf 9105899868860--------7----978429999998489767663447866477546762689865168048999999
Q gi|254780670|r 1 MFINDIIAREVID--------S----RGSPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAF 68 (424)
Q Consensus 1 m~I~~i~~r~IlD--------S----RG~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~ 68 (424)
|+|++|..+.+-= | ..++.|-|+|++++|..|.+-+++-.. ..|.+.........
T Consensus 5 ~~I~~i~~~~~~~Pl~~p~~~s~~~~~~~~~v~V~i~t~~G~~G~GE~~~~~~-------------~~~~~e~~~~~~~~ 71 (381)
T 3fcp_A 5 ATVEQIESWIVDVPTIRPHKLSMTTMGCQSLVIVRLTRSDGICGIGEATTIGG-------------LSYGVESPEAISSA 71 (381)
T ss_dssp CBEEEEEEEEEEECBC-----------CEEEEEEEEEETTSCEEEEEEECSTT-------------TTSSSCCHHHHHHH
T ss_pred CEEEEEEEEEEECCCCCCEECCCEEEEEEEEEEEEEEECCCCEEEEECCCCCC-------------CCCCCCCHHHHHHH
T ss_conf 76888999999756778768768799888999999998999989983514788-------------77675689999999
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEEC
Q ss_conf 98756789759885578988864653036643221232222024489987526634984888225324564754300000
Q gi|254780670|r 69 VNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNIL 148 (424)
Q Consensus 69 in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~Nii 148 (424)
+++.++|.|+|+++.+...+.+.|...... ..-++-|+.+|++-+.++..++|+|+.|++......|+-.. +
T Consensus 72 i~~~~~~~l~g~~~~~~~~l~~~~~~~~~~------~~~a~saie~AlwDl~gK~~~~pv~~lLg~~~~~~~~~~~~--~ 143 (381)
T 3fcp_A 72 ITHYLTPLLKGQPADNLNALTARMNGAIKG------NTFAKSAIETALLDAQGKALGLPVSALLGGALQTALPVLWT--L 143 (381)
T ss_dssp HHHTHHHHHTTSBSSCHHHHHHHHHHHCCS------CHHHHHHHHHHHHHHHHHHHTCBHHHHTTCCSCSEEEBCEE--E
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHCCCCC------CHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCEEEEE--E
T ss_conf 999988997799868889999998356555------57999999999888631001673355258743333303664--0
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 36645567766102565148877489998999999999998752000013676557644886846899999999997538
Q gi|254780670|r 149 NGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYSTNVGDEGGFSPNLKTADSALDLIANSIEKAG 228 (424)
Q Consensus 149 nGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t~vgDEGGfap~~~~~eeaL~ll~eAi~~aG 228 (424)
....+-.+.. ...+.+.++|+.+-.-.-|++ +.++-++.+....+..|
T Consensus 144 -------------------~~~~~~~~~~--------~~~~~~~~~Gf~~~Kikvg~~-----~~~~di~~v~~ir~~~g 191 (381)
T 3fcp_A 144 -------------------ASGDTAKDIA--------EGEKLLAEGRHRAFKLKIGAR-----ELATDLRHTRAIVEALG 191 (381)
T ss_dssp -------------------CSSCHHHHHH--------HHHHHTC----CEEEEECCSS-----CHHHHHHHHHHHHHHTC
T ss_pred -------------------CCCCHHHHHH--------HHHHHHHHCCCCCCCCCCCCC-----CHHHHHHHHHHHHHHHC
T ss_conf -------------------2687067899--------999999855665122456887-----65999999999998709
Q ss_pred CCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEE
Q ss_conf 53111023431104653202785111146865687899999998765448699776763104237998864238836850
Q gi|254780670|r 229 YNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQLV 308 (424)
Q Consensus 229 y~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~Iv 308 (424)
.++.+.+|+- .-.+.++.+++... +++|+|.+||+|+..+|++++.+|.+..+ +-|.
T Consensus 192 ----~~~~l~~Dan----------------~~~~~~~a~~~~~~-l~~~~i~~iEeP~~~~d~~~~~~l~~~~~--~pIa 248 (381)
T 3fcp_A 192 ----DRASIRVDVN----------------QAWDAATGAKGCRE-LAAMGVDLIEQPVSAHDNAALVRLSQQIE--TAIL 248 (381)
T ss_dssp ----TTCEEEEECT----------------TCBCHHHHHHHHHH-HHHTTCSEEECCBCTTCHHHHHHHHHHSS--SEEE
T ss_pred ----CCCCCCCCCC----------------CCCCHHHHHHHHHH-HHHCCCCCCCCCCCHHHHHHHHHHHHCCC--CCEE
T ss_conf ----7556445644----------------57889999999988-65311223468878455234677875179--8722
Q ss_pred CCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCC
Q ss_conf 43000021488852100386522342545300389999999999987986999507888723589989998199
Q gi|254780670|r 309 GDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVATNC 382 (424)
Q Consensus 309 GDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~~a 382 (424)
+|.- ++++.-+++.++.++++.+.+|+..+|.++++++.+++|+++|..+++++- .|+.=...+-+.++...
T Consensus 249 ~dE~-~~~~~~~~~~i~~~~~d~~~~~~~~~GGi~~~~~i~~~a~~~gi~~~~~~~-~~~~i~~~a~~~~aa~~ 320 (381)
T 3fcp_A 249 ADEA-VATAYDGYQLAQQGFTGAYALKIAKAGGPNSVLALARVAQAAGIGLYGGTM-LEGTVGTVASLHAWSTL 320 (381)
T ss_dssp ESTT-CCSHHHHHHHHHTTCCSEEEECHHHHTSTTHHHHHHHHHHHHTCEEEECCS-CCCHHHHHHHHHHHTTS
T ss_pred CCCC-CCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEECCC-CCCHHHHHHHHHHHHHC
T ss_conf 6876-578899899987178760666533478769999999999983981885488-66799999999999858
No 21
>3gy1_A Mandelate racemase/muconate lactonizing protein; structural genomics, protein structure initiative, NYSGXRC, enolase, PSI- 2; 1.60A {Clostridium beijerinckii ncimb 8052} PDB: 3dfh_A
Probab=99.80 E-value=1.8e-16 Score=140.64 Aligned_cols=308 Identities=20% Similarity=0.243 Sum_probs=202.2
Q ss_pred EEEEEEEEEEEECCCCC-EEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf 10589986886079784-29999998489767663447866477546762689865168048999999987567897598
Q gi|254780670|r 2 FINDIIAREVIDSRGSP-TIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAFVNDEIRTALLGC 80 (424)
Q Consensus 2 ~I~~i~~r~IlDSRG~P-TvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~in~~i~~~L~g~ 80 (424)
+|++|...-+ +..++ .|-|+|+|++|..|.+-+..+.+ .......+++.++|.|+|+
T Consensus 7 ~i~~ve~~~~--~~~~~~~viVrI~td~G~~G~Ge~~~~~~--------------------~~~~~~~i~~~l~p~liG~ 64 (408)
T 3gy1_A 7 IITDVLCYIT--KPDRHNLVVVKVETNKGIYGLGCATFQQR--------------------PKAVSLVVSEYLKPILIGR 64 (408)
T ss_dssp BEEEEEEEEE--CSSSSCEEEEEEEETTSCEEEEECCCTTS--------------------HHHHHHHHHHTHHHHHTTS
T ss_pred EEEEEEEEEE--CCCCCEEEEEEEEECCCCEEEEECCCCCC--------------------HHHHHHHHHHHHHHHHCCC
T ss_conf 7636899998--89983699999998999989983017888--------------------7999999999999997699
Q ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCC
Q ss_conf 85578988864653036643221232222024489987526634984888225324564754300000366455677661
Q gi|254780670|r 81 DARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNILNGGIHADNALDF 160 (424)
Q Consensus 81 ~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~NiinGG~HA~~~l~i 160 (424)
|+.+...+-+.|..- .-.....+..+++-|+.+|++-+.++..++|||+.|+|.....+ |+...+.+
T Consensus 65 d~~~ie~l~~~~~~~-~~~~~~~~~~~A~saId~ALwDl~gK~~~~Pl~~lLGG~~r~~i--~~y~~~~~---------- 131 (408)
T 3gy1_A 65 DANNIEDLWQMMMVN-SYWRNGPILNNAISGVDMALWDIKGKLANMPLYQLFGGKSRDAI--AAYTHAVA---------- 131 (408)
T ss_dssp BTTCHHHHHHHHHHH-TSSCCSHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCSSSCE--EEEEEEEE----------
T ss_pred CHHHHHHHHHHHHHH-HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCC--CEEECCCC----------
T ss_conf 854699999999874-11257836889999999999999998749960554287511002--20101333----------
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCCCCC-----------CCCHHHHHHHHHHHHHH
Q ss_conf 0256514887748999899999999999875200001---367655764488-----------68468999999999975
Q gi|254780670|r 161 QEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYS---TNVGDEGGFSPN-----------LKTADSALDLIANSIEK 226 (424)
Q Consensus 161 QEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~---t~vgDEGGfap~-----------~~~~eeaL~ll~eAi~~ 226 (424)
.+..+. ....+..+ ++|+. ..+|-.|+=+.. ..+.++.++.-.+.++.
T Consensus 132 ----------~~~~~~-------~~~~~~~~-~~G~~~~KiKvG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~~~v~a 193 (408)
T 3gy1_A 132 ----------DNLEDL-------YTEIDEIR-KKGYQHIRCQLGFYGGNSSEFHTTDNPTQGSYFDQDEYMRTTVSMFSS 193 (408)
T ss_dssp ----------SSHHHH-------HHHHHHHH-HTTCSEEEEEECC----------------CEECCHHHHHHHHHHHHHH
T ss_pred ----------CCHHHH-------HHHHHHHH-HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf ----------346889-------99999988-777799987625666662102444665556776402449999999999
Q ss_pred CCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEE
Q ss_conf 38531110234311046532027851111468656878999999987654486997767631042379988642388368
Q gi|254780670|r 227 AGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQ 306 (424)
Q Consensus 227 aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~ 306 (424)
+--..|.++.|.+|+. ...+.++-+.+... +++|++.++|+|+..+|++++.++.+..+ +-
T Consensus 194 ir~~~g~~~~l~vDan----------------~~~~~~~A~~~~~~-l~~~~~~w~EeP~~~~d~~~~~~l~~~~~--ip 254 (408)
T 3gy1_A 194 LREKYGYKFHILHDVH----------------ERLFPNQAVQFAKD-VEKYKPYFIEDILPPDQNEWLGQIRSQTS--TP 254 (408)
T ss_dssp HHHHHTTSSEEEEECT----------------TCSCHHHHHHHHHH-HGGGCCSEEECSSCTTCGGGHHHHHTTCC--CC
T ss_pred HHHHCCCCCCEEEEEC----------------CCCCHHHHHHHHHH-HHHCCCCEEECCCCCCCHHHHHHHHCCCC--CC
T ss_conf 9996298875554247----------------77889999999999-87507834781456446677766630478--68
Q ss_pred EECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHH--HHHHHHCC
Q ss_conf 50430000214888521003865223425453003899999999999879869995078887235899--89998199
Q gi|254780670|r 307 LVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIA--DLAVATNC 382 (424)
Q Consensus 307 IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~ia--DLAVg~~a 382 (424)
|.+|.-. .++.-+.+.++.++++.+.+|+..+|-+|+++.++.+|+.+|..+++...++.+.=.+.+ |++.++..
T Consensus 255 Ia~gE~~-~~~~~~~~~i~~~a~di~~~d~~~~GGit~~~ki~~lA~~~gi~v~~h~~~~~s~i~~aa~~hl~aa~~~ 331 (408)
T 3gy1_A 255 LATGELF-NNPMEWKSLIANRQVDFIRCHVSQIGGITPALKLGSLCAAFGVRIAWHTPSDITPIGVAVNIHLNINLHN 331 (408)
T ss_dssp EEECTTC-CSGGGTHHHHHTTCCSEECCCGGGGTSHHHHHHHHHHHHHTTCEECCCCCSSSCHHHHHHHHHHHHHCTT
T ss_pred CCCCCCC-CCHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 6488124-3677888887542045352056557975499999999998699698607765469999999999985877
No 22
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=99.80 E-value=7.7e-16 Score=136.03 Aligned_cols=305 Identities=16% Similarity=0.198 Sum_probs=206.6
Q ss_pred CEEEEEEEEEE--------EECCC----CCEEEEEEEECCCCEEEEECC-CCCCCCCCEEEEECCCCCCCCCCHHHHHHH
Q ss_conf 91058998688--------60797----842999999848976766344-786647754676268986516804899999
Q gi|254780670|r 1 MFINDIIAREV--------IDSRG----SPTIEVDVCLEDGSTGRAMVP-SGASTGIHEAFELRDQEKRYFGKGVLKAIA 67 (424)
Q Consensus 1 m~I~~i~~r~I--------lDSRG----~PTvEvev~~~~g~~gra~~P-SGaStG~~Ea~elrD~~~~~~G~gV~~Av~ 67 (424)
|+|++|....+ -.|+| +.+|-|+|.+ +|..|.+-+. .+. ..|.+.....+..
T Consensus 1 MkI~~i~~~~~~~Pl~~p~~~s~~~~~~~~~~lv~i~~-dG~~G~GE~~~~~~--------------~~~~~e~~~~~~~ 65 (370)
T 1nu5_A 1 MKIEAISTTIVDVPTRRPLQMSFTTVHKQSYVIVQVKA-GGLVGIGEGGSVGG--------------PTWGSESAETIKV 65 (370)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEE-TTEEEEEEECCSTT--------------TTTSSCCHHHHHH
T ss_pred CEEEEEEEEEEECCCCCCEECCCEEEEEEEEEEEEEEE-CCCEEEEEECCCCC--------------CCCCCCCHHHHHH
T ss_conf 98989999999665578768766589988999999998-99199997537788--------------8747568999999
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEE
Q ss_conf 99875678975988557898886465303664322123222202448998752663498488822532456475430000
Q gi|254780670|r 68 FVNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNI 147 (424)
Q Consensus 68 ~in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~Ni 147 (424)
.+++.++|.|+|+++.+...+...|-..-. -...+.-|+.+|++-+.++..++|||+.|++......|+...
T Consensus 66 ~i~~~~~~~l~g~~~~~~~~~~~~~~~~~~------~~~~a~said~Al~Dl~gK~~~~pl~~llg~~~~~~~~~~~~-- 137 (370)
T 1nu5_A 66 IIDNYLAPLLVGKDASNLSQARVLMDRAVT------GNLSAKAAIDIALHDLKARALNLSIADLIGGTMRTSIPIAWT-- 137 (370)
T ss_dssp HHHHTHHHHHTTSBTTCHHHHHHHHHHHCS------SCHHHHHHHHHHHHHHHHHHTTCBHHHHHTCCSCSEEEBCEE--
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHCCC------CCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCC--
T ss_conf 999988898728987779999998752134------756799999997878864130000121068756544444321--
Q ss_pred CCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 03664556776610256514887748999899999999999875200001367655764488684689999999999753
Q gi|254780670|r 148 LNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYSTNVGDEGGFSPNLKTADSALDLIANSIEKA 227 (424)
Q Consensus 148 inGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t~vgDEGGfap~~~~~eeaL~ll~eAi~~a 227 (424)
+..+ +..+.+.. ..+.++.+++..-.- -....+..+-++.+....+..
T Consensus 138 ~~~~--------------------~~~~~~~~-------~~~~~~~~g~~~~k~-----~~~~~~~~~d~~~i~~~~~~~ 185 (370)
T 1nu5_A 138 LASG--------------------DTARDIDS-------ALEMIETRRHNRFKV-----KLGARTPAQDLEHIRSIVKAV 185 (370)
T ss_dssp ECSS--------------------CHHHHHHH-------HHHHHHTTSCSEEEE-----ECSSSCHHHHHHHHHHHHHHH
T ss_pred CCCC--------------------CCHHHHHH-------HHHHHHHHHCCCEEE-----CCCCCCHHHHHHHHHHHHHHH
T ss_conf 2478--------------------82345688-------888887540100121-----137776799999999999872
Q ss_pred CCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEEE
Q ss_conf 85311102343110465320278511114686568789999999876544869977676310423799886423883685
Q gi|254780670|r 228 GYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQL 307 (424)
Q Consensus 228 Gy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~I 307 (424)
|.++.|-+|+ +.-.+.++-+.+... +++|++.+||+|+..+|++++.+|.+..+ +-|
T Consensus 186 ----~~~~~l~vDa----------------N~~~~~~~a~~~~~~-l~~~~i~~iEeP~~~~~~~~~~~l~~~~~--ipi 242 (370)
T 1nu5_A 186 ----GDRASVRVDV----------------NQGWDEQTASIWIPR-LEEAGVELVEQPVPRANFGALRRLTEQNG--VAI 242 (370)
T ss_dssp ----GGGCEEEEEC----------------TTCCCHHHHHHHHHH-HHHHTCCEEECCSCTTCHHHHHHHHHHCS--SEE
T ss_pred ----CCCCEEECCC----------------CCCCCHHHHHHHHHH-HHHCCCEEEEECCCCCCHHHHHHHHHHCC--CCC
T ss_conf ----8664452157----------------778899999999999-87438607880467210358999997447--986
Q ss_pred ECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCHH
Q ss_conf 043000021488852100386522342545300389999999999987986999507888723589989998199801
Q gi|254780670|r 308 VGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVATNCGQI 385 (424)
Q Consensus 308 vGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~~a~~i 385 (424)
.+|.- +.++.-+.+.++.++++.+.+||..+|.+|++++.+++|+++|..+++++ .-|+.=.+.+.+.++...+..
T Consensus 243 a~dE~-~~~~~~~~~~i~~~~~d~~~~k~~~~GGit~~~~~~~~a~~~gi~~~~~~-~~~~~i~~~a~~hl~aa~~~~ 318 (370)
T 1nu5_A 243 LADES-LSSLSSAFELARDHAVDAFSLKLCNMGGIANTLKVAAVAEAAGISSYGGT-MLDSTVGTAAALHVYATLPSL 318 (370)
T ss_dssp EESTT-CCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECC-SSCCHHHHHHHHHHHTTSSCC
T ss_pred CCCCC-CCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECC-CCCCHHHHHHHHHHHHHCCCC
T ss_conf 37734-45545667777606777366345136789999999999998799399679-856699999999999977898
No 23
>3bsm_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9262H, clone 9262H1BCT8P1; 2.20A {Chromohalobacter salexigens dsm 3043}
Probab=99.79 E-value=1.6e-18 Score=155.96 Aligned_cols=310 Identities=16% Similarity=0.205 Sum_probs=208.9
Q ss_pred CEEEEEEEEEEEECCCCCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf 91058998688607978429999998489767663447866477546762689865168048999999987567897598
Q gi|254780670|r 1 MFINDIIAREVIDSRGSPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAFVNDEIRTALLGC 80 (424)
Q Consensus 1 m~I~~i~~r~IlDSRG~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~in~~i~~~L~g~ 80 (424)
|+|+++. -+.-.-|+-.|-|+|+|++|..|.+-++.+.+ -......+++.++|.|+|+
T Consensus 3 ~ki~~~~--~~~~~~~r~~~lVkI~td~G~~G~GE~~~~~~--------------------~~~~~~~i~~~l~p~liG~ 60 (413)
T 3bsm_A 3 LKIRDAY--TIVTCPGRNFVTLKIVTESGTHGIGDATLNGR--------------------EMAVAAYLDEHVVPALIGR 60 (413)
T ss_dssp CBEEEEE--EEEECSSSCEEEEEEEETTSCEEEEECCCTTC--------------------HHHHHHHHHHTHHHHHTTS
T ss_pred CEEEEEE--EEEECCCCCEEEEEEEECCCCEEEEECCCCCC--------------------HHHHHHHHHHHHHHHHCCC
T ss_conf 2672469--99977998689999998999989986107888--------------------4999999999999997799
Q ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCC
Q ss_conf 85578988864653036643221232222024489987526634984888225324564754300000366455677661
Q gi|254780670|r 81 DARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNILNGGIHADNALDF 160 (424)
Q Consensus 81 ~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~NiinGG~HA~~~l~i 160 (424)
|+.+...+-+.|...- ......+...++-|+.+|++-+.++..++|||+.|++.....+|+ ...+.++
T Consensus 61 d~~~ie~i~~~l~~~~-~~~~~~~~~~A~said~ALwDl~gK~~g~Pl~~LLGG~~r~~i~~--ya~~~~~--------- 128 (413)
T 3bsm_A 61 DAGRIEDTWQYLYRGA-YWRRGPVTMTAIAAVDMALWDIKAKAAGMPLYQLLGGKSRERVMT--YAHCTGQ--------- 128 (413)
T ss_dssp BTTCHHHHHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHTCCSCSSEEE--EEEEEES---------
T ss_pred CHHHHHHHHHHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEE--EEECCCC---------
T ss_conf 8404999999999750-036774067899999999999999882997899718865513577--7633788---------
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC---CC---------------------CCCCCCCCCCCCHHHH
Q ss_conf 02565148877489998999999999998752000013---67---------------------6557644886846899
Q gi|254780670|r 161 QEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYST---NV---------------------GDEGGFSPNLKTADSA 216 (424)
Q Consensus 161 QEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t---~v---------------------gDEGGfap~~~~~eea 216 (424)
+..+.+... -..+ ++|+.. .+ .|.+--+......++.
T Consensus 129 -----------~~~~~~~~~---~~~~-----~~G~~~~Kikvg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (413)
T 3bsm_A 129 -----------TIEDCLGEV---ARHV-----ELGYRAVRVQSGVPGIETTYGVAKTPGERYEPADSSLPAEHVWSTEKY 189 (413)
T ss_dssp -----------SHHHHHHHH---HHHH-----HTTCSEEEEEECCCC----------------------------CHHHH
T ss_pred -----------CHHHHHHHH---HHHH-----HCCCCEEEEECCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf -----------769999999---9999-----759751565427872012111112740004743335652233442667
Q ss_pred HHHHHHHHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHH
Q ss_conf 99999999753853111023431104653202785111146865687899999998765448699776763104237998
Q gi|254780670|r 217 LDLIANSIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKI 296 (424)
Q Consensus 217 L~ll~eAi~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~ 296 (424)
++...+.++...-..|.++.|.+|+ +...|.++-+.+. +.+++|++..+|+|+..+|+++++.
T Consensus 190 ~~~~~~~v~air~~~G~~~~l~vDa----------------N~~~~~~~A~~~~-~~l~~~~l~w~EeP~~~~d~~~~~~ 252 (413)
T 3bsm_A 190 LNHAPKLFAAVRERFGDDLHVLHDV----------------HHRLTPIEAARLG-KAVEPYHLFWLEDCVPAENQESLRL 252 (413)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEEEEC----------------TTCSCHHHHHHHH-HHTGGGCCSEEECCSCCSSGGGGHH
T ss_pred HHHHHHHHHHHHHHHCCCCCEEECC----------------CCCCCHHHHHHHH-HHHHHCCEEEECCCCCCCCHHHHHH
T ss_conf 8889999999999819764321355----------------4555568899999-9862234003538755478878899
Q ss_pred HHHHCCCCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCC-CCHHHH--
Q ss_conf 86423883685043000021488852100386522342545300389999999999987986999507888-723589--
Q gi|254780670|r 297 LTNKIGSNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGE-TEDHTI-- 373 (424)
Q Consensus 297 l~~~~g~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGE-TeD~~i-- 373 (424)
+....+ +-|.+|.-. +++.-+++.++.++++.+-+|+...|-+|++++.+.+|+.+|..+.+ |...+ +.=.+.
T Consensus 253 l~~~~~--ipIa~gE~~-~~~~~~~~li~~~a~dii~~d~~~~GGit~~~~ia~lA~~~gi~v~~-h~~~~~s~i~~aa~ 328 (413)
T 3bsm_A 253 IREHTT--TPLAIGEVF-NSIHDCRELIQNQWIDYIRMPLTHGGGITAMRRVADLASLYHVRTGF-HGPTDLSPVCLGAA 328 (413)
T ss_dssp HHHHCC--SCEEECTTC-CSGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEECC-CCCTTSCHHHHHHH
T ss_pred HHHHCC--CCCCCCCCC-CCHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHCCCEEEE-ECCCCCCHHHHHHH
T ss_conf 998517--881057565-54288999987535887735753468799999999999986994875-17975049999999
Q ss_pred HHHHHHHCCCH
Q ss_conf 98999819980
Q gi|254780670|r 374 ADLAVATNCGQ 384 (424)
Q Consensus 374 aDLAVg~~a~~ 384 (424)
+|++.++....
T Consensus 329 ~h~aaa~~~~~ 339 (413)
T 3bsm_A 329 IHFDTWVPNFG 339 (413)
T ss_dssp HHHHHHCTTBC
T ss_pred HHHHHHCCCCC
T ss_conf 99999677887
No 24
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=99.79 E-value=3.8e-17 Score=145.66 Aligned_cols=305 Identities=16% Similarity=0.159 Sum_probs=201.3
Q ss_pred CEEEEEEEEEE--------EECCC----CCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHH
Q ss_conf 91058998688--------60797----8429999998489767663447866477546762689865168048999999
Q gi|254780670|r 1 MFINDIIAREV--------IDSRG----SPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAF 68 (424)
Q Consensus 1 m~I~~i~~r~I--------lDSRG----~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~ 68 (424)
|+|++|..+.+ -.|+| ++++-|+|. ++|..|.+-++... .+.|.|..+..+...
T Consensus 7 ~kI~~i~~~~~~~Pl~~p~~~s~~~~~~~~~~~V~i~-~~G~~G~GE~~p~~-------------~~~~~~e~~~~~~~~ 72 (400)
T 3mwc_A 7 ARIDGVSLYEIVIPMKIPFQISSGTCYTRRSLVVEIR-EGDLFGYGESAPFE-------------EPFYLGETLETTKVI 72 (400)
T ss_dssp CCCCEEEEEEEEEECSSCCCBTTBCCCEEEEEEEEEE-ETTEEEEEEECCBS-------------STTSTTCBHHHHHHH
T ss_pred CEEEEEEEEEEEEECCCCEECCCEEEEEEEEEEEEEE-ECCEEEEEEECCCC-------------CCCCCCCCHHHHHHH
T ss_conf 7040799999984057877888869998889999999-89989999726778-------------887488899999999
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEEC
Q ss_conf 98756789759885578988864653036643221232222024489987526634984888225324564754300000
Q gi|254780670|r 69 VNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNIL 148 (424)
Q Consensus 69 in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~Nii 148 (424)
+++.++|.|+|+++.+...+.+.|...... ..-+..|+++|++.+.++..++|||++|++.... ++.+...+.
T Consensus 73 i~~~~~p~liG~~~~~~~~i~~~l~~~~~~------~~~a~said~AlwDl~gk~~~~pl~~lLGg~~~~-~~~~~~~~~ 145 (400)
T 3mwc_A 73 LKNHLLPMILGKEPLSIEEFNHLIKNGIRG------NHFARCGVENAYWDLIAKKNKISLKAMIEKKMKN-LGVKQEYLA 145 (400)
T ss_dssp HHHTHHHHHTTCCCSSHHHHHHHHHHSCCS------CHHHHHHHHHHHHHHHHHHTTCBHHHHHHHHHHH-TTCCGGGGC
T ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHHHCCC------CHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCC-CCCCHHHCC
T ss_conf 999879997599944589999986532358------7789999999999999987197178761653002-453111014
Q ss_pred CCCCCC-CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 366455-6776610256514887748999899999999999875200001---367655764488684689999999999
Q gi|254780670|r 149 NGGIHA-DNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYS---TNVGDEGGFSPNLKTADSALDLIANSI 224 (424)
Q Consensus 149 nGG~HA-~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~---t~vgDEGGfap~~~~~eeaL~ll~eAi 224 (424)
++.... ...+. +|.. .+..+-++. +++.+ ++|+. ..+| ++. ..+.+..+.+++
T Consensus 146 ~~~~i~~~~~~~------~~~~-~~~~~~~~~-------~~~~~-~~G~~~~Kik~~------~~~--D~~~i~~ir~~~ 202 (400)
T 3mwc_A 146 SNNYIESGAALG------IPED-GRIETLIHQ-------VEESL-QEGYRRIKIKIK------PGW--DVEPLQETRRAV 202 (400)
T ss_dssp BCSEEEBCEEEC------CCTT-CCHHHHHHH-------HHHHH-HHTCSCEEEECB------TTB--SHHHHHHHHHHH
T ss_pred CCCCCCCCCEEC------CCCC-CCHHHHHHH-------HHHHH-HCCCCEECCCCC------CHH--HHHHHHHHHHHC
T ss_conf 432222342205------7876-689999999-------99998-669565216778------357--799999988505
Q ss_pred HHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCC
Q ss_conf 75385311102343110465320278511114686568789999999876544869977676310423799886423883
Q gi|254780670|r 225 EKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSN 304 (424)
Q Consensus 225 ~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~ 304 (424)
|.++.|.+|+. +.| +.++.. .+. -+++|+|.+||||+..+|+++.+++....+
T Consensus 203 -------g~~~~l~~DaN-------~~~---------~~~~a~-~~~-~l~~~~i~~iEqP~~~~d~~~l~~l~~~~~-- 255 (400)
T 3mwc_A 203 -------GDHFPLWTDAN-------SSF---------ELDQWE-TFK-AMDAAKCLFHEQPLHYEALLDLKELGERIE-- 255 (400)
T ss_dssp -------CTTSCEEEECT-------TCC---------CGGGHH-HHH-HHGGGCCSCEESCSCTTCHHHHHHHHHHSS--
T ss_pred -------CCCCEEEECCC-------CCC---------CHHHHH-HHH-HHHHHHCCCCCCCCCHHHHHHHHHHHHCCC--
T ss_conf -------77745984467-------667---------888999-999-854321023358888677899998864258--
Q ss_pred EEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHH--HHHHHHH
Q ss_conf 6850430000214888521003865223425453003899999999999879869995078887235--8998999
Q gi|254780670|r 305 CQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDH--TIADLAV 378 (424)
Q Consensus 305 ~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~--~iaDLAV 378 (424)
+.|.+|. .+++...+.+.++.++++.+.+||+.+|.+|++++.+++|+++|+.++++ ...|+.=. ..++||-
T Consensus 256 ipIa~dE-~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~~~~~A~~~gi~~~~~-~~~es~ig~~a~~~la~ 329 (400)
T 3mwc_A 256 TPICLDE-SLISSRVAEFVAKLGISNIWNIKIQRVGGLLEAIKIYKIATDNGIKLWGG-TMPESGLGARFLISLAS 329 (400)
T ss_dssp SCEEEST-TCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEEC-CSCCCHHHHHHHHHHTT
T ss_pred CCCCCCC-CCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEC-CCCCCHHHHHHHHHHHH
T ss_conf 9875883-22365549999974999779856766789899999999999879949977-97443999999999984
No 25
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.70A {Burkholderia xenovorans LB400} PDB: 2oo6_A
Probab=99.78 E-value=9.9e-17 Score=142.61 Aligned_cols=316 Identities=16% Similarity=0.174 Sum_probs=213.3
Q ss_pred CEEEEEEEEEEEECCCCCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf 91058998688607978429999998489767663447866477546762689865168048999999987567897598
Q gi|254780670|r 1 MFINDIIAREVIDSRGSPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAFVNDEIRTALLGC 80 (424)
Q Consensus 1 m~I~~i~~r~IlDSRG~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~in~~i~~~L~g~ 80 (424)
|+|++|....+ |.-.++=|=|+|+|++|.+|.+-+..+ +...++..+++ .++|.|+|+
T Consensus 3 mkI~~i~~~~~-~~~~r~~~~V~I~td~G~~G~GE~~~~-----------------~~~~~~~~~~~----~l~~~LiG~ 60 (409)
T 3go2_A 3 LKVVSVDTLCC-DAGWRNYHFVKLTTDEGIVGWSEFDEG-----------------FGSPGVTAVIE----QLGKRLVGA 60 (409)
T ss_dssp CBEEEEEEEEE-ECSSSEEEEEEEEETTCCEEEEEECST-----------------TTCTTHHHHHH----HHHHHHTTS
T ss_pred CEEEEEEEEEE-CCCCCEEEEEEEEECCCCEEEEEECCC-----------------CCHHHHHHHHH----HHHHHHCCC
T ss_conf 26968999998-899950899999989999899874898-----------------77799999999----999987799
Q ss_pred CHHHHHHHHHHHHHCCCCCCCCC--CCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCCCCC
Q ss_conf 85578988864653036643221--2322220244899875266349848882253245647543000003664556776
Q gi|254780670|r 81 DARDQLLIDKIMIDLDGTPNKSR--LGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNILNGGIHADNAL 158 (424)
Q Consensus 81 ~~~dQ~~iD~~Li~lDgT~nks~--lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~NiinGG~HA~~~l 158 (424)
++.|...+=+.|.. +...+. +..+++-|+.+|++-+.++..++|||++|+|.....+ |......++.+.....
T Consensus 61 d~~die~~~~~l~~---~~~~~~~g~~~~A~saId~AlwDl~gK~~g~Pl~~LLGG~~r~~v--~~y~s~~~~~~~~~~~ 135 (409)
T 3go2_A 61 SVMEHERFFAEAYC---LTRPATGGVVSEGIGAIENALLDAKAKTLNVPCYELLGGKLRDRV--PVYWSHCPTWRINHPK 135 (409)
T ss_dssp BTTCHHHHHHHHHH---HHGGGCSHHHHHHHHHHHHHHHHHHHHHHTSBGGGGTTCCSCSEE--EEEECSTTHHHHHCTT
T ss_pred CCCHHHHHHHHHHH---HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCE--EEEEEECCCCCCCCHH
T ss_conf 91429999999997---324677743888999999999999987759969998268764600--2543204566666502
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCC-------------CCCCCCCCCCHHHHHHHHHH
Q ss_conf 610256514887748999899999999999875200001---36765-------------57644886846899999999
Q gi|254780670|r 159 DFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYS---TNVGD-------------EGGFSPNLKTADSALDLIAN 222 (424)
Q Consensus 159 ~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~---t~vgD-------------EGGfap~~~~~eeaL~ll~e 222 (424)
.+. |. ..+..+..+.. ++ +.++|+. ..+|. -.+|.|.++...+.++...+
T Consensus 136 ~~~-----~~-~~~~d~~~~~~-------~~-~~~~Gf~~~K~kvg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 201 (409)
T 3go2_A 136 FFG-----PP-VTDLDGVKRTA-------EE-ARERQFRAIKTNIFIHDDGPLHAWRPGFAVPFQPALNVDRKVLRNLRA 201 (409)
T ss_dssp TSS-----SC-CCSHHHHHHHH-------HH-HHHTTCCEEEECCEECSSSSCEECBGGGTBSCCTTCCCCHHHHHHHHH
T ss_pred HCC-----CC-CCCHHHHHHHH-------HH-HHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 116-----76-66779999999-------99-997698768776223467641014554456777644323899999999
Q ss_pred HHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCC
Q ss_conf 99753853111023431104653202785111146865687899999998765448699776763104237998864238
Q gi|254780670|r 223 SIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIG 302 (424)
Q Consensus 223 Ai~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g 302 (424)
.|+.+.-..|.|+.|.+|+- ...+.++-+.+...| ++|++..+|+|. +|+++.++|.++.+
T Consensus 202 ~v~air~~~G~d~~l~vDaN----------------~~~~~~~A~~~~~~L-~~~~l~wiEeP~--~~~~~~~~l~~~~~ 262 (409)
T 3go2_A 202 HLEALRDGAGPDVEILLDLN----------------FNAKPEGYLKILREL-ADFDLFWVEIDS--YSPQGLAYVRNHSP 262 (409)
T ss_dssp HHHHHHHHHCTTSEEEEECT----------------TCSCHHHHHHHHHHT-TTSCCSEEECCC--SCHHHHHHHHHTCS
T ss_pred HHHHHHHHHCCCCCEEECCC----------------CCCCHHHHHHHHHHH-HCCCCEEEECCC--CCHHHHHHHHHHCC
T ss_conf 99999997199862675167----------------765478899999986-404827996574--32269999998679
Q ss_pred CCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCC
Q ss_conf 83685043000021488852100386522342545300389999999999987986999507888723589989998199
Q gi|254780670|r 303 SNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVATNC 382 (424)
Q Consensus 303 ~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~~a 382 (424)
+.|.+|.-. ..+.-+.+.++.++++-+.+++ ..|.+|++++.+++|+++|+.++. |.. ++.=.+.+.+.++...
T Consensus 263 --ipIa~gE~~-~~~~~~~~~i~~~a~di~~~d~-~~GGit~~~kia~lA~~~gi~v~~-h~~-~~~i~~~a~~hl~aa~ 336 (409)
T 3go2_A 263 --HPISSCETL-FGIREFKPFFDANAVDVAIVDT-IWNGVWQSMKIAAFADAHDINVAP-HNF-YGHLCTMINANFAAAV 336 (409)
T ss_dssp --SCEEECTTC-CHHHHHHHHHHTTCCSEEEECH-HHHCHHHHHHHHHHHHHTTCEEEE-CCC-SCHHHHHHHHHHHHHC
T ss_pred --CCCCCCCCC-CCHHHHHHHHHHCCCCEEECCC-CCCCHHHHHHHHHHHHHCCCEEEE-CCC-CCHHHHHHHHHHHHHC
T ss_conf --982157765-7889975566631441896166-558878999999999987997997-079-7489999999999968
No 26
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} SCOP: c.1.11.2 d.54.1.1 PDB: 2chr_A
Probab=99.78 E-value=1.9e-16 Score=140.54 Aligned_cols=297 Identities=16% Similarity=0.171 Sum_probs=201.6
Q ss_pred CEEEEEEEEEEE--------ECCC----CCEEEEEEEECCCCEEEEEC-CCCCCCCCCEEEEECCCCCCCCCCHHHHHHH
Q ss_conf 910589986886--------0797----84299999984897676634-4786647754676268986516804899999
Q gi|254780670|r 1 MFINDIIAREVI--------DSRG----SPTIEVDVCLEDGSTGRAMV-PSGASTGIHEAFELRDQEKRYFGKGVLKAIA 67 (424)
Q Consensus 1 m~I~~i~~r~Il--------DSRG----~PTvEvev~~~~g~~gra~~-PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~ 67 (424)
|+|++|..+.+- .|+| ...|-|+|++ +|..|.+-+ |.+. +.|.+........
T Consensus 1 MKI~~I~~~~~~~Pl~~p~~~s~~~~~~~~~v~v~i~~-dG~~G~GE~~~~~~--------------~~~~~~~~~~~~~ 65 (370)
T 1chr_A 1 MKIDAIEAVIVDVPTKRPIQMSITTVHQQSYVIVRVYS-EGLVGVGEGGSVGG--------------PVWSAECAETIKI 65 (370)
T ss_dssp CCCCCCCEECCCCCCCCCCTTCCSSCCCCCCEECCBCS-SSCBCCEECCCBTT--------------BTTSSCCHHHHHH
T ss_pred CEEEEEEEEEEECCCCCCEECCCEEEEEEEEEEEEEEE-CCCEEEEEECCCCC--------------CCCCCCCHHHHHH
T ss_conf 98659999999703678667666279876799999998-99389997237788--------------8547456999999
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEE
Q ss_conf 99875678975988557898886465303664322123222202448998752663498488822532456475430000
Q gi|254780670|r 68 FVNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNI 147 (424)
Q Consensus 68 ~in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~Ni 147 (424)
.+++.++|.|+|+++.+...+.+.|.... .....+..|+.+|++-+.++..++|||+.|++......|+... +
T Consensus 66 ~i~~~l~p~l~g~~~~~~~~~~~~~~~~~------~~~~~a~~aid~AlwDl~gk~~~~pl~~lLg~~~~~~~~~~~~-~ 138 (370)
T 1chr_A 66 IVERYLAPHLLGTDAFNVSGALQTMARAV------TGNASAKAAVEMALLDLKARALGVSIAELLGGPLRSAIPIAWT-L 138 (370)
T ss_dssp HHHHHTHHHHTTSCTTCHHHHHHHHHHHC------SSCHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCSCSEEEBEEE-E
T ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHHHCC------CCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEE-C
T ss_conf 99998788854798337999999975224------5668999999999999987652977875278753223442231-2
Q ss_pred CCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC---CCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 036645567766102565148877489998999999999998752000013---67655764488684689999999999
Q gi|254780670|r 148 LNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYST---NVGDEGGFSPNLKTADSALDLIANSI 224 (424)
Q Consensus 148 inGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t---~vgDEGGfap~~~~~eeaL~ll~eAi 224 (424)
..+ .+-.+.. ...+.+.+.|+.+ .+|. .+.++-++.+....
T Consensus 139 ~~~--------------------~~~~~~~--------~~~~~~~~~g~~~~K~k~g~--------~~~~~d~~~v~~vr 182 (370)
T 1chr_A 139 ASG--------------------DTKRDLD--------SAVEMIERRRHNRFKVKLGF--------RSPQDDLIHMEALS 182 (370)
T ss_dssp CSS--------------------SHHHHHH--------HHHHHHHTTCCCEEEEECSS--------SCSHHHHHHHHHHH
T ss_pred CCC--------------------CCHHHHH--------HHHHHHHHCCCCEEEEECCC--------CCHHHHHHHHHHHH
T ss_conf 468--------------------9577778--------99999875265668760357--------99899999999999
Q ss_pred HHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCC
Q ss_conf 75385311102343110465320278511114686568789999999876544869977676310423799886423883
Q gi|254780670|r 225 EKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSN 304 (424)
Q Consensus 225 ~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~ 304 (424)
+.. |.++.|.+|+-. -.+.++.+.+...| ++|+|.+||||+..+||+++.+|.++.+
T Consensus 183 ~~~----g~~~~l~vDan~----------------~~~~~~A~~~~~~l-~~~~i~~iEeP~~~~d~~~~~~l~~~~~-- 239 (370)
T 1chr_A 183 NSL----GSKAYLRVDVNQ----------------AWDEQVASVYIPEL-EALGVELIEQPVGRENTQALRRLSDNNR-- 239 (370)
T ss_dssp HHS----STTCCEEEECTT----------------CCCTTHHHHHTHHH-HTTTEEEEECCSCTTCHHHHHHHHHHSC--
T ss_pred HHC----CCCEEEECCCCC----------------CCCHHHHHHHHHHH-HHCCCEEECCCCCCCCHHHHHHHHHHCC--
T ss_conf 863----875476106776----------------88999999999866-6519702138888545789999997237--
Q ss_pred EEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHH--HHHHHH
Q ss_conf 6850430000214888521003865223425453003899999999999879869995078887235899--899981
Q gi|254780670|r 305 CQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIA--DLAVAT 380 (424)
Q Consensus 305 ~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~ia--DLAVg~ 380 (424)
+-|.+|.-.. ++..+.+.++.++++.+.+||..+|.+|++++.+.+|+++|..++++|-. |+.=..-+ |++.++
T Consensus 240 ipIa~dEs~~-~~~~~~~~~~~~~~d~i~~d~~~~GGit~~~~i~~~A~~~gi~~~~~~~~-~s~i~~~a~~hl~aa~ 315 (370)
T 1chr_A 240 VAIMADESLS-TLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEASGIASYGGTML-DSTIGTSVALQLYSTV 315 (370)
T ss_dssp SEEEESSSCC-SHHHHHHHHTTTSCSEEEECTTTSCSHHHHHHHHHHHHHHTCEEEECCSC-CTTHHHHHHHHHHTTS
T ss_pred CCCCCCCCCC-CHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCC-CCHHHHHHHHHHHHHC
T ss_conf 7743784146-77777889972876545666424796899999999999869908857985-4589999999999977
No 27
>3i6e_A Muconate cycloisomerase I; structural GENOMICS,NYSGXRC,TARGER 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=99.78 E-value=6.8e-16 Score=136.42 Aligned_cols=293 Identities=17% Similarity=0.228 Sum_probs=195.9
Q ss_pred CEEEEEEEEEE-------E-ECCC-----CCEEEEEEEECCCCEEEEEC-CCCCCCCCCEEEEECCCCCCCCCCHHHHHH
Q ss_conf 91058998688-------6-0797-----84299999984897676634-478664775467626898651680489999
Q gi|254780670|r 1 MFINDIIAREV-------I-DSRG-----SPTIEVDVCLEDGSTGRAMV-PSGASTGIHEAFELRDQEKRYFGKGVLKAI 66 (424)
Q Consensus 1 m~I~~i~~r~I-------l-DSRG-----~PTvEvev~~~~g~~gra~~-PSGaStG~~Ea~elrD~~~~~~G~gV~~Av 66 (424)
|+|+++..+.+ + -|.| ...|-|+|.+++|.+|.+-+ |.+..++ ....+.
T Consensus 8 ~kI~~~~~~~~~~P~~~~~~~~~g~~~~~~~~~iV~l~td~G~~G~GE~~p~~~~~~-----------------~~~~~~ 70 (385)
T 3i6e_A 8 QKIIAMDLWHLALPVVSARDHGIGRVEGSCEIVVLRLVAEGGAEGFGEASPWAVFTG-----------------TPEASY 70 (385)
T ss_dssp SBEEEEEEEEEECCC--------------CEEEEEEEEETTSCEEEEEECCCTTTTC-----------------CHHHHH
T ss_pred CEEEEEEEEEEEEEECCCCCCCCCEEEEEEEEEEEEEEECCCCEEEEECCCCCCCCC-----------------CHHHHH
T ss_conf 679899999985214066446686484026899999998999999985457788898-----------------899999
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEE
Q ss_conf 99987567897598855789888646530366432212322220244899875266349848882253245647543000
Q gi|254780670|r 67 AFVNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMN 146 (424)
Q Consensus 67 ~~in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~N 146 (424)
..+++.++|.|+|+++.+...+-..+....+.. ..+.-|+.+|++-+.++..++|||+.|++.....+|+ ..
T Consensus 71 ~~l~~~l~p~lig~~~~~~~~~~~~~~~~~~~~------~~a~said~AlwDl~gk~~g~pl~~lLG~~~~~~~~~--~~ 142 (385)
T 3i6e_A 71 AALDRYLRPLVIGRRVGDRVAIMDEAARAVAHC------TEAKAALDSALLDLAGRISNLPVWALLGGKCRDTIPL--SC 142 (385)
T ss_dssp HHHHHTTHHHHTTCBGGGHHHHHHHHHHHSSSC------HHHHHHHHHHHHHHHHHHHTCBHHHHTTCCSCSEEEB--EE
T ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC------HHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCE--EE
T ss_conf 999998789875998004999999998745665------8999999999999987435874236269876777631--44
Q ss_pred ECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 003664556776610256514887748999899999999999875200001---36765576448868468999999999
Q gi|254780670|r 147 ILNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYS---TNVGDEGGFSPNLKTADSALDLIANS 223 (424)
Q Consensus 147 iinGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~---t~vgDEGGfap~~~~~eeaL~ll~eA 223 (424)
.+.+ .+..+.. ...++ +..+|+. ..+| ..+.++-++.+ ++
T Consensus 143 ~~~~--------------------~~~~~~~-------~~~~~-~~~~Gf~~~KiKvg--------~~~~~~d~~~i-~~ 185 (385)
T 3i6e_A 143 SIAN--------------------PDFDADI-------ALMER-LRADGVGLIKLKTG--------FRDHAFDIMRL-EL 185 (385)
T ss_dssp EECC--------------------SSHHHHH-------HHHHH-HHHHTCCEEEEECS--------SSCHHHHHHHH-HH
T ss_pred ECCC--------------------CCHHHHH-------HHHHH-HHHHCCCEEEECCC--------CCCHHHHHHHH-HH
T ss_conf 2135--------------------7667788-------99888-77726774753045--------77418789999-87
Q ss_pred HHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCC
Q ss_conf 97538531110234311046532027851111468656878999999987654486997767631042379988642388
Q gi|254780670|r 224 IEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGS 303 (424)
Q Consensus 224 i~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~ 303 (424)
+.++. .|+.+.+|+ ++ ..+.++-+.+...| ++|++.+||+|+..+|++++.+|.++.+
T Consensus 186 i~~~~----~d~~l~vDa-------N~---------~~~~~~a~~~~~~l-~~~~i~~iEeP~~~~~~~~~~~l~~~~~- 243 (385)
T 3i6e_A 186 IARDF----PEFRVRVDY-------NQ---------GLEIDEAVPRVLDV-AQFQPDFIEQPVRAHHFELMARLRGLTD- 243 (385)
T ss_dssp HHHHC----TTSEEEEEC-------TT---------CCCGGGHHHHHHHH-HTTCCSCEECCSCTTCHHHHHHHHTTCS-
T ss_pred HHHHC----CCHHEEEEC-------CC---------CCCHHHHHHHHHHH-HHCCCCCCCCCCCCCCHHHHHHHHHCCC-
T ss_conf 77518----863114226-------77---------62579999999987-6402345567879668799988752368-
Q ss_pred CEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHH--HHHHHH
Q ss_conf 36850430000214888521003865223425453003899999999999879869995078887235899--899981
Q gi|254780670|r 304 NCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIA--DLAVAT 380 (424)
Q Consensus 304 ~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~ia--DLAVg~ 380 (424)
+.|++|. .+.+..-+.+.++.++++.+.+||..+|.+|++++.+++|+++|..++++| .-|+.=.+.+ +++.++
T Consensus 244 -ipia~dE-~~~~~~~~~~~i~~~~~d~v~~d~~~~GGit~~~ki~~~A~~~gi~~~~~~-~~~~~i~~~a~~hlaaa~ 319 (385)
T 3i6e_A 244 -VPLLADE-SVYGPEDMVRAAHEGICDGVSIKIMKSGGLTRAQTVARIAAAHGLMAYGGD-MFEAGLAHLAGTHMIAAT 319 (385)
T ss_dssp -SCEEEST-TCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC-CSCCHHHHHHHHHHHHTC
T ss_pred -CCCCCCC-CCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECC-CCHHHHHHHHHHHHHHHC
T ss_conf -8521774-014515777776531144422464557888999999999998699088768-530599999999999868
No 28
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A*
Probab=99.76 E-value=2.7e-15 Score=131.95 Aligned_cols=295 Identities=19% Similarity=0.307 Sum_probs=203.3
Q ss_pred CEEEEEEEEE--------EEECCCC----CEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHH
Q ss_conf 9105899868--------8607978----429999998489767663447866477546762689865168048999999
Q gi|254780670|r 1 MFINDIIARE--------VIDSRGS----PTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAF 68 (424)
Q Consensus 1 m~I~~i~~r~--------IlDSRG~----PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~ 68 (424)
|+|++|..|. +-.|.|. .++-|+|.+++|..|.+-+..+ ..|.|..+..+...
T Consensus 1 mkI~~i~~~~~~ipl~~p~~~s~~~~~~~~~~~v~v~t~~G~~G~GE~~~~---------------~~~~~e~~~~~~~~ 65 (354)
T 3jva_A 1 MKIKQVHVRASKIKLKETFTIALGTIESADSAIVEIETEEGLVGYGEGGPG---------------IFITGETLAGTLET 65 (354)
T ss_dssp CCEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCEEEEEECCC---------------TTTTCCCHHHHHHH
T ss_pred CEEEEEEEEEEEEECCCCEECCCEEEEEEEEEEEEEEECCCCEEEEECCCC---------------CCCCHHHHHHHHHH
T ss_conf 989999999998656896788788999989999999989999999730587---------------67472559999999
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEEC
Q ss_conf 98756789759885578988864653036643221232222024489987526634984888225324564754300000
Q gi|254780670|r 69 VNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNIL 148 (424)
Q Consensus 69 in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~Nii 148 (424)
+ +.++|.|+|+|+.+...+-+.|-... .++..+..|+.+|++-+.++..++|||+.|++......+. .
T Consensus 66 ~-~~~~~~l~g~d~~~~~~~~~~~~~~~------~~~~~a~said~AlwDl~~k~~~~pl~~llg~~~~~~~~~---~-- 133 (354)
T 3jva_A 66 I-ELFGQAIIGLNPFNIEKIHEVMDKIS------AFAPAAKAAIDIACYDLMGQKAQLPLYQLLGGYDNQVITD---I-- 133 (354)
T ss_dssp H-HHHHTTSTTCCTTCHHHHHHHHHHHC------SSCHHHHHHHHHHHHHHHHHHHTSBHHHHTTCSCSEEECC---E--
T ss_pred H-HHHHHHHCCCCHHHHHHHHHHHHHCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE---E--
T ss_conf 9-99889865999035688888765214------5537799999998655555345543366507877750256---6--
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 3664556776610256514887748999899999999999875200001---3676557644886846899999999997
Q gi|254780670|r 149 NGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYS---TNVGDEGGFSPNLKTADSALDLIANSIE 225 (424)
Q Consensus 149 nGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~---t~vgDEGGfap~~~~~eeaL~ll~eAi~ 225 (424)
. .+..+-.+..+.. .+.. ++|+. ..+|. +.++-++.+...-+
T Consensus 134 ----------------~--~~~~~~~~~~~~~-------~~~~-~~g~~~~KiKvg~---------~~~~di~~i~~ir~ 178 (354)
T 3jva_A 134 ----------------T--LGIDEPNVMAQKA-------VEKV-KLGFDTLKIKVGT---------GIEADIARVKAIRE 178 (354)
T ss_dssp ----------------E--ECSCCHHHHHHHH-------HHHH-HTTCSEEEEECCS---------CHHHHHHHHHHHHH
T ss_pred ----------------E--ECCCCHHHHHHHH-------HHHH-HCCCCEEEEECCC---------CHHHHHHHHHHHHH
T ss_conf ----------------4--0235527888999-------9999-7279879997799---------97999999999999
Q ss_pred HCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCE
Q ss_conf 53853111023431104653202785111146865687899999998765448699776763104237998864238836
Q gi|254780670|r 226 KAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNC 305 (424)
Q Consensus 226 ~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~ 305 (424)
.. |.++.|.+|+.. ..+.++-+.+... +++|.|.++|||+..+|++++.+|+++.+ +
T Consensus 179 ~~----g~~~~l~~Dan~----------------~~~~~~a~~~~~~-l~~~~i~~iEeP~~~~~~~~~~~l~~~~~--i 235 (354)
T 3jva_A 179 AV----GFDIKLRLDANQ----------------AWTPKDAVKAIQA-LADYQIELVEQPVKRRDLEGLKYVTSQVN--T 235 (354)
T ss_dssp HH----CTTSEEEEECTT----------------CSCHHHHHHHHHH-TTTSCEEEEECCSCTTCHHHHHHHHHHCS--S
T ss_pred HH----CCCCEEEEECCC----------------CCHHHHHHHHHHH-CCCCCEEECCCCCCCCCHHHHHHHCCCCC--C
T ss_conf 70----999889997876----------------5255789987442-23344331268988448667532203424--6
Q ss_pred EEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHH--HHHHHHC
Q ss_conf 850430000214888521003865223425453003899999999999879869995078887235899--8999819
Q gi|254780670|r 306 QLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIA--DLAVATN 381 (424)
Q Consensus 306 ~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~ia--DLAVg~~ 381 (424)
.|.+|.- +++...+++.|+.++.+.+.+||..+|.+|++++.+++|+++|+.+++++-..||.=.+.+ |||.++.
T Consensus 236 pia~~E~-~~~~~~~~~~i~~~a~d~v~~d~~~~GGi~~~~~~~~~a~~~gi~~~~~~~~~~s~i~~~a~~hl~a~~~ 312 (354)
T 3jva_A 236 TIMADES-CFDAQDALELVKKGTVDVINIKLMKCGGIHEALKINQICETAGIECMIGCMAEETTIGITAAAHLAAAQK 312 (354)
T ss_dssp EEEESTT-CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCTTCCHHHHHHHHHHHHHCT
T ss_pred CCCCCCC-EECCHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCC
T ss_conf 4317862-2200017999976987989867854589999999999999869968985887646899999999998489
No 29
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiative, PSI, nysgxrc; 1.60A {Salmonella typhimurium LT2} SCOP: c.1.11.2 d.54.1.1
Probab=99.76 E-value=1.3e-15 Score=134.41 Aligned_cols=317 Identities=14% Similarity=0.096 Sum_probs=201.7
Q ss_pred CEEEEEEEEEE--------EECCCCCEEEEEEEECCCCEEEEEC-CCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHH
Q ss_conf 91058998688--------6079784299999984897676634-47866477546762689865168048999999987
Q gi|254780670|r 1 MFINDIIAREV--------IDSRGSPTIEVDVCLEDGSTGRAMV-PSGASTGIHEAFELRDQEKRYFGKGVLKAIAFVND 71 (424)
Q Consensus 1 m~I~~i~~r~I--------lDSRG~PTvEvev~~~~g~~gra~~-PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~in~ 71 (424)
|+|++|....+ ++|+ .+|=|+|+|++|.+|.+-+ |+..++ - .++..+-+
T Consensus 3 mKIt~ie~~~~~~p~~~~~~~s~--~~vlV~i~td~G~~G~GE~~~~~~~~-------------------~-~~~~~~~~ 60 (410)
T 2gl5_A 3 LKITSIEVFDCELKKRDQTMSSY--NPVLIRVNTDSGLSGIGEVGLAYGAG-------------------A-KAGVGIIR 60 (410)
T ss_dssp CCEEEEEEEECCGGGTCGGGTTC--CCEEEEEEETTSCEEEEEESCSSSTT-------------------H-HHHHHHHH
T ss_pred CEEEEEEEEEECCCCCCCCCCCE--EEEEEEEEECCCCEEEEEEECCCCCC-------------------H-HHHHHHHH
T ss_conf 27989999996787778873532--57999999899998999622767986-------------------8-99999999
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHC-CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEECCC
Q ss_conf 567897598855789888646530-3664322123222202448998752663498488822532456475430000036
Q gi|254780670|r 72 EIRTALLGCDARDQLLIDKIMIDL-DGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNILNG 150 (424)
Q Consensus 72 ~i~~~L~g~~~~dQ~~iD~~Li~l-DgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~NiinG 150 (424)
.++|.|+|+++.+-+.+-+.|... ........+...++-|+-+|++-..++..++|||+.|++.....+|+-. -..+
T Consensus 61 ~l~p~liG~d~~~ie~i~~~~~~~~~~~~~~~~~~~~A~said~AlwDl~gK~~~~Pv~~LLGg~~r~~i~~ya--s~~~ 138 (410)
T 2gl5_A 61 DLAPLIVGEDPLNIEKIWEFFFRKTFWGMGGGNVFYAGMSAIDIALWDIKGKYLGVPVYQLLGGKTNEKLRTYA--SQLQ 138 (410)
T ss_dssp HHGGGTTTSCTTCHHHHHHHHHHSSSGGGSCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTSCSCSSEEEEE--ECGG
T ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCEEE--EECC
T ss_conf 99999779980019999999999644116786257889999999999998766199821013874344663122--2114
Q ss_pred CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCC---CCCCCCCCCCC------------CCCCCHHH
Q ss_conf 6455677661025651488774899989999999999987520000---13676557644------------88684689
Q gi|254780670|r 151 GIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGY---STNVGDEGGFS------------PNLKTADS 215 (424)
Q Consensus 151 G~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~---~t~vgDEGGfa------------p~~~~~ee 215 (424)
.-+.... ....+..+..+...+. + ++|+ ...+|.-|... .... ..+
T Consensus 139 ~~~~~~~----------~~~~~~~e~~~~~~~~-------~-~~Gf~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~-~~~ 199 (410)
T 2gl5_A 139 FGWGDKN----------HILVTPEEYAEAARAA-------L-DDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLL-LAD 199 (410)
T ss_dssp GCCTTCC----------SCCCSHHHHHHHHHHH-------H-HTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCC-CHH
T ss_pred CCCCCCC----------CCCCCHHHHHHHHHHH-------H-HCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCC-CHH
T ss_conf 5666532----------2337999999999999-------9-7398769761134576620455541134456665-256
Q ss_pred HHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHH
Q ss_conf 99999999975385311102343110465320278511114686568789999999876544869977676310423799
Q gi|254780670|r 216 ALDLIANSIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWK 295 (424)
Q Consensus 216 aL~ll~eAi~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~ 295 (424)
.++.-.+.|+.+.-..|.|+.+.+|+- .-.+.++-+.+.. .+++|.+..+|+|+..+|+++++
T Consensus 200 ~~~~d~~~v~aiR~~~G~d~~l~vD~n----------------~~~~~~~A~~~~~-~l~~~~~~w~EeP~~~~~~~~~~ 262 (410)
T 2gl5_A 200 QLKMGEARIAAMREAMGDDADIIVEIH----------------SLLGTNSAIQFAK-AIEKYRIFLYEEPIHPLNSDNMQ 262 (410)
T ss_dssp HHHHHHHHHHHHHHHHCSSSEEEEECT----------------TCSCHHHHHHHHH-HHGGGCEEEEECSSCSSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEECCC----------------CCCCHHHHHHHHH-HHHCCCCEEEEECCCCCCHHHHH
T ss_conf 799899999999984088964554234----------------4557999999999-75013764898078828899999
Q ss_pred HHHHHCCCCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHH
Q ss_conf 88642388368504300002148885210038652234254530038999999999998798699950788872358998
Q gi|254780670|r 296 ILTNKIGSNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIAD 375 (424)
Q Consensus 296 ~l~~~~g~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaD 375 (424)
+|....+ +-|.+|.- ++++.-+.+.|+.+++..+-+|+.-+|-+|+++..+.+|..+|+.+++ |.. ++.=.+.+.
T Consensus 263 ~lr~~~~--ipia~gE~-~~~~~~~~~~i~~~a~di~~~d~~~~GGit~~~~i~~~A~~~gi~v~~-h~~-~~~i~~~a~ 337 (410)
T 2gl5_A 263 KVSRSTT--IPIATGER-SYTRWGYRELLEKQSIAVAQPDLCLCGGITEGKKICDYANIYDTTVQV-HVC-GGPVSTVAA 337 (410)
T ss_dssp HHHHHCS--SCEEECTT-CCTTHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEECC-CCC-SSHHHHHHH
T ss_pred HHHHCCC--CCCCCCCC-EECCHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEE-CCC-CCHHHHHHH
T ss_conf 9863457--87136763-220102677875176519987774358707899999999985996997-888-869999999
Q ss_pred HHHHHCC
Q ss_conf 9998199
Q gi|254780670|r 376 LAVATNC 382 (424)
Q Consensus 376 LAVg~~a 382 (424)
+.++...
T Consensus 338 ~h~~aa~ 344 (410)
T 2gl5_A 338 LHMETAI 344 (410)
T ss_dssp HHHHHHC
T ss_pred HHHHHHC
T ss_conf 9999867
No 30
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis str} PDB: 3dg6_A* 3dg7_A*
Probab=99.75 E-value=5.4e-16 Score=137.17 Aligned_cols=279 Identities=19% Similarity=0.247 Sum_probs=193.8
Q ss_pred CEEEEEEEEEE--------EECCC----CCEEEEEEEECCCCEEEEECCC-CCCCCCCEEEEECCCCCCCCCCHHHHHHH
Q ss_conf 91058998688--------60797----8429999998489767663447-86647754676268986516804899999
Q gi|254780670|r 1 MFINDIIAREV--------IDSRG----SPTIEVDVCLEDGSTGRAMVPS-GASTGIHEAFELRDQEKRYFGKGVLKAIA 67 (424)
Q Consensus 1 m~I~~i~~r~I--------lDSRG----~PTvEvev~~~~g~~gra~~PS-GaStG~~Ea~elrD~~~~~~G~gV~~Av~ 67 (424)
|+|++|..+.+ -.|+| +..|=|+|++++|..|.+-++. ..+ .|.....+.+
T Consensus 1 MKI~~i~~~~~~iPl~~p~~~s~~~~~~~~~~lv~i~td~G~~G~GE~~~~~~~----------------~~~~~~~~~~ 64 (367)
T 3dg3_A 1 MKIVAIGAIPFSIPYTKPLRFASGEVHAAEHVLVRVHTDDGIVGVAEAPPRPFT----------------YGETQTGIVA 64 (367)
T ss_dssp CBEEEEEEEEEEECBC-----------CEEEEEEEEEETTSCEEEEEECCCTTT----------------TCCCHHHHHH
T ss_pred CEEEEEEEEEEEEECCCCEECCCEEEEEEEEEEEEEEECCCCEEEEEECCCCCC----------------CCCCHHHHHH
T ss_conf 989899999998516788688785899999999999989999899974188885----------------7567999999
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEE
Q ss_conf 99875678975988557898886465303664322123222202448998752663498488822532456475430000
Q gi|254780670|r 68 FVNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNI 147 (424)
Q Consensus 68 ~in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~Ni 147 (424)
.+.+.++|.|+|+++.+...+...|....+. -.++.|+.+|++-+.++..++|||+.|++... ++|....
T Consensus 65 ~l~~~l~~~l~g~~~~~~~~~~~~~~~~~~~-------~~a~saie~AlwDl~gk~~~~pl~~lLgg~~~---~~~~~~~ 134 (367)
T 3dg3_A 65 VIEQYFAPALIGLTLTEREVAHTRMARTVGN-------PTAKAAIDMAMWDALGQSLRLSVSEMLGGYTD---RMRVSHM 134 (367)
T ss_dssp HHHHTHHHHHTTCBTTCHHHHHHHHTTSCSC-------HHHHHHHHHHHHHHHHHHHTCBHHHHHTCCCS---EEEEEEE
T ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC---CEEEECC
T ss_conf 9999877986589844689999986404555-------99999999999887641518863010588421---0011013
Q ss_pred CCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC---CCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 036645567766102565148877489998999999999998752000013---67655764488684689999999999
Q gi|254780670|r 148 LNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYST---NVGDEGGFSPNLKTADSALDLIANSI 224 (424)
Q Consensus 148 inGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t---~vgDEGGfap~~~~~eeaL~ll~eAi 224 (424)
... .+-.+.+.- ..+.....|+.+ .+|. .+.++-++.+...-
T Consensus 135 ~~~--------------------~~~~~~~~~-------~~~~~~~~Gf~~~Kik~~~--------~~~~~d~~~i~~~r 179 (367)
T 3dg3_A 135 LGF--------------------DDPVKMVAE-------AERIRETYGINTFKVKVGR--------RPVQLDTAVVRALR 179 (367)
T ss_dssp EES--------------------SCHHHHHHH-------HHHHHHHHCCCEEEEECCC--------SSTHHHHHHHHHHH
T ss_pred CCC--------------------CCHHHHHHH-------HHHHHHHCCCCEECCCCCC--------CCCHHHHHHHHHHH
T ss_conf 566--------------------780468999-------9999985696610123345--------54088999999999
Q ss_pred HHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCC
Q ss_conf 75385311102343110465320278511114686568789999999876544869977676310423799886423883
Q gi|254780670|r 225 EKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSN 304 (424)
Q Consensus 225 ~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~ 304 (424)
+. .|.++.|.+|+ +...|.++-+.+... +++|++.++|+|+..+||+++.+|.++.+
T Consensus 180 ~~----~g~~~~l~~Da----------------n~~~~~~~A~~~~~~-l~~~~i~~~EeP~~~~d~~~~~~l~~~~~-- 236 (367)
T 3dg3_A 180 ER----FGDAIELYVDG----------------NRGWSAAESLRAMRE-MADLDLLFAEELCPADDVLSRRRLVGQLD-- 236 (367)
T ss_dssp HH----HGGGSEEEEEC----------------TTCSCHHHHHHHHHH-TTTSCCSCEESCSCTTSHHHHHHHHHHCS--
T ss_pred HH----CCCCCEEEECC----------------CCCCCHHHHHHHHHH-HHCCCCCCCCCCCCCCCHHHHHHHHHHCC--
T ss_conf 86----39854797457----------------656578999999997-32124335657767437699999998489--
Q ss_pred EEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 6850430000214888521003865223425453003899999999999879869995078
Q gi|254780670|r 305 CQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRS 365 (424)
Q Consensus 305 ~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRS 365 (424)
+-|.+|. .+++..-+.+.++.++++.+.+|+...| +|++++.+++|+.+|..+++++-.
T Consensus 237 ipia~~E-~~~~~~~~~~~i~~~~~~~v~~~~~~gG-it~~~~i~~~a~~~gi~~~~~~~~ 295 (367)
T 3dg3_A 237 MPFIADE-SVPTPADVTREVLGGSATAISIKTARTG-FTGSTRVHHLAEGLGLDMVMGNQI 295 (367)
T ss_dssp SCEEECT-TCSSHHHHHHHHHHTSCSEEEECHHHHT-THHHHHHHHHHHHHTCEEEECCSS
T ss_pred CCCCCCC-CCCCCHHHHHHHHHCCCCEEECCCCCCC-CHHHHHHHHHHHHCCCEEEECCCC
T ss_conf 9963687-5665102778876302347834753577-068999999999879979978986
No 31
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=99.75 E-value=2.4e-14 Score=124.98 Aligned_cols=300 Identities=20% Similarity=0.246 Sum_probs=202.4
Q ss_pred CEEEEEEEEEE--------EECCC----CCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHH
Q ss_conf 91058998688--------60797----8429999998489767663447866477546762689865168048999999
Q gi|254780670|r 1 MFINDIIAREV--------IDSRG----SPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAF 68 (424)
Q Consensus 1 m~I~~i~~r~I--------lDSRG----~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~ 68 (424)
|+|++|..+.+ -.|+| +.++-|+|.+++|..|.+-++..- .|.+.........
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~~~~~~~~~~~~lV~i~td~G~~G~GE~~~~~---------------~~~~~~~~~~~~~ 65 (366)
T 1tkk_A 1 MKIIRIETSRIAVPLTKPFKTALRTVYTAESVIVRITYDSGAVGWGEAPPTL---------------VITGDSMDSIESA 65 (366)
T ss_dssp CBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEECCCT---------------TTTCCCHHHHHHH
T ss_pred CEEEEEEEEEEEEECCCCEECCCEEEEEEEEEEEEEEECCCCEEEEECCCCC---------------CCCCCCHHHHHHH
T ss_conf 9589999999987356876878867999899999999899999997115866---------------7576789999999
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEEC
Q ss_conf 98756789759885578988864653036643221232222024489987526634984888225324564754300000
Q gi|254780670|r 69 VNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNIL 148 (424)
Q Consensus 69 in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~Nii 148 (424)
+++.+.|.|+|.++.+...+-+.|..+-. ....++-|+.+|++-..++..++|||+.+++.... .|. ....
T Consensus 66 ~~~~~~~~l~g~~~~~~~~i~~~~~~~~~------~~~~a~said~AlwDl~gk~~~~pl~~Llg~~~~~-~~~--~~~~ 136 (366)
T 1tkk_A 66 IHHVLKPALLGKSLAGYEAILHDIQHLLT------GNMSAKAAVEMALYDGWAQMCGLPLYQMLGGYRDT-LET--DYTV 136 (366)
T ss_dssp HHHTHHHHHTTCBGGGHHHHHHHHHHSSS------SCHHHHHHHHHHHHHHHHHHTTSBHHHHHTCCCSE-EEB--CEEE
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHCCCC------CHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC-CEE--EECC
T ss_conf 99987898627750148898876311355------51899999999975456454424422204886665-213--3113
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 36645567766102565148877489998999999999998752000013676557644886846899999999997538
Q gi|254780670|r 149 NGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYSTNVGDEGGFSPNLKTADSALDLIANSIEKAG 228 (424)
Q Consensus 149 nGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t~vgDEGGfap~~~~~eeaL~ll~eAi~~aG 228 (424)
.. .+..+ . .......+. +++.+- -+-+.....+.-++.+....+..
T Consensus 137 ~~--------------------~~~~~-~------~~~~~~~~~-~g~~~~-----K~k~~~~~~~~d~~~i~~ir~~~- 182 (366)
T 1tkk_A 137 SV--------------------NSPEE-M------AADAENYLK-QGFQTL-----KIKVGKDDIATDIARIQEIRKRV- 182 (366)
T ss_dssp CS--------------------CCHHH-H------HHHHHHHHH-HTCCEE-----EEECCSSCHHHHHHHHHHHHHHH-
T ss_pred CC--------------------CCHHH-H------HHHHHHHHH-HCCEEE-----EECCCCCCHHHHHHHHHHHHHHC-
T ss_conf 46--------------------99899-9------998877775-254056-----41247776788999999999745-
Q ss_pred CCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHH-HCCEEEEECCCCCCCHHHHHHHHHHCCCCEEE
Q ss_conf 53111023431104653202785111146865687899999998765-44869977676310423799886423883685
Q gi|254780670|r 229 YNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVD-QYPIYSIEDGMSEDDWHGWKILTNKIGSNCQL 307 (424)
Q Consensus 229 y~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~-~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~I 307 (424)
|.++.|.+|+. ...+.++-+.+...|-+ .+.+.++|+|+..+|+++.++|.+..+ +.|
T Consensus 183 ---g~~~~l~vDan----------------~~~~~~~A~~~~~~L~~~~~~~~~iEeP~~~~d~~~~~~l~~~~~--~pI 241 (366)
T 1tkk_A 183 ---GSAVKLRLDAN----------------QGWRPKEAVTAIRKMEDAGLGIELVEQPVHKDDLAGLKKVTDATD--TPI 241 (366)
T ss_dssp ---CSSSEEEEECT----------------TCSCHHHHHHHHHHHHHTTCCEEEEECCSCTTCHHHHHHHHHHCS--SCE
T ss_pred ---CCEEEEEECCC----------------CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCC--CCE
T ss_conf ---96388843423----------------479999999999998860368544578988105888999986089--846
Q ss_pred ECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHH--HHHHHHHHC
Q ss_conf 04300002148885210038652234254530038999999999998798699950788872358--998999819
Q gi|254780670|r 308 VGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHT--IADLAVATN 381 (424)
Q Consensus 308 vGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~--iaDLAVg~~ 381 (424)
.+|.- +.++..+.+.++.++++.+.+|+..+|.+|++++.+++|+++|..++++ ...|+.=.. .+|+|-++.
T Consensus 242 a~~E~-~~~~~~~~~~i~~~~~d~v~~d~~~~GGit~~~~i~~~a~~~gi~~~~~-~~~~~~i~~~a~~hlaa~~~ 315 (366)
T 1tkk_A 242 MADES-VFTPRQAFEVLQTRSADLINIKLMKAGGISGAEKINAMAEACGVECMVG-SMIETKLGITAAAHFAASKR 315 (366)
T ss_dssp EECTT-CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCCEEEC-CSSCCHHHHHHHHHHHHHCT
T ss_pred EEEEE-ECCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEC-CCCCCHHHHHHHHHHHHHCC
T ss_conf 63323-1477889999970787768516763177899999999999869918865-87555899999999998487
No 32
>3n4e_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics; HET: MSE; 2.40A {Paracoccus denitrificans}
Probab=99.74 E-value=3.5e-14 Score=123.77 Aligned_cols=307 Identities=16% Similarity=0.187 Sum_probs=195.2
Q ss_pred CEEEEEEEEEEEECCCC----CEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 91058998688607978----42999999848976766344786647754676268986516804899999998756789
Q gi|254780670|r 1 MFINDIIAREVIDSRGS----PTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAFVNDEIRTA 76 (424)
Q Consensus 1 m~I~~i~~r~IlDSRG~----PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~in~~i~~~ 76 (424)
|+|++|....+-=++|. ++|=|+|++++|..|.+-+... .+ + ...+..+.+.++|.
T Consensus 3 mkI~~ie~~~~~~~~~~~~~~~~~~Vri~td~G~~G~GE~~p~--~~---------------~---~~~~~~i~~~l~~~ 62 (393)
T 3n4e_A 3 LKIAKVEALSVAMGDGTGWMPTSAFVRITAEDGTVGWGEASPM--LG---------------G---IASLGVVARDIAPF 62 (393)
T ss_dssp CBEEEEEEEEEECC------CEEEEEEEEETTSCEEEEEECCG--GG---------------G---HHHHHHHHHTTHHH
T ss_pred CEEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCEEEEECCCC--CC---------------C---HHHHHHHHHHHHHH
T ss_conf 4699999999657788850453699999979999999826577--77---------------2---89999999999999
Q ss_pred HCCCCHHHHHHHHH-HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCC
Q ss_conf 75988557898886-46530366432212322220244899875266349848882253245647543000003664556
Q gi|254780670|r 77 LLGCDARDQLLIDK-IMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNILNGGIHAD 155 (424)
Q Consensus 77 L~g~~~~dQ~~iD~-~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~NiinGG~HA~ 155 (424)
|+|+++.+...+=+ ++..+-.. ....+...++-|+-+|++-+.++..++|||+.|++..... +|+...++|.
T Consensus 63 lig~~~~~~~~~~~~~~~~~~~~-~~~g~~~~a~said~AlwDl~gK~~g~pl~~lLGG~~r~~--i~~y~s~~~~---- 135 (393)
T 3n4e_A 63 LEGQEVLDHAVLLDRMMHRLVKL-GPEGIATAALAACDIALWDLKGKLLGQPIYKLLGGAWRTR--LPCYSSIGGN---- 135 (393)
T ss_dssp HTTSBGGGHHHHHHHHHHHSGGG-CCTTHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCSCSE--EEEEEEECCC----
T ss_pred HCCCCCCCHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCC--CCCEEECCCC----
T ss_conf 77999302999999999877641-7741578999999999999998763998411058856655--5311212677----
Q ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC-CCHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 7766102565148877489998999999999998752000013676557644886-846899999999997538531110
Q gi|254780670|r 156 NALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYSTNVGDEGGFSPNL-KTADSALDLIANSIEKAGYNAGKD 234 (424)
Q Consensus 156 ~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t~vgDEGGfap~~-~~~eeaL~ll~eAi~~aGy~~g~d 234 (424)
......+.+....+-+. ..++..-...-|++.... .+.++-++.+...-+. .|.+
T Consensus 136 -------------~~~~~~~~~~~~~~~~~-------~~~~~~~k~~~~~~~~~~~~~~~~di~~i~~ir~~----~g~~ 191 (393)
T 3n4e_A 136 -------------AARSVDEVVREVARRVE-------AEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVREL----LGPD 191 (393)
T ss_dssp -------------SSSCHHHHHHHHHHHHH-------HHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHH----HCSS
T ss_pred -------------CCCCHHHHHHHHHHHHH-------HHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHH----HCCC
T ss_conf -------------52111778888888998-------73223353114764343433305579999999998----3998
Q ss_pred HHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCEEE
Q ss_conf 23431104653202785111146865687899999998765448699776763104237998864238836850430000
Q gi|254780670|r 235 LLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQLVGDDLFV 314 (424)
Q Consensus 235 i~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~IvGDDL~v 314 (424)
+.|.+|+ +...+.++-+.+... +++|++.++|+|+..+|+++..+|.++.+ +.|.+|.- +
T Consensus 192 ~~l~vDa----------------n~~~~~~~A~~~~~~-l~~~~~~~iEeP~~~~~~~~~~~l~~~~~--ipIa~gE~-~ 251 (393)
T 3n4e_A 192 AVIGFDA----------------NNGYSVGGAIRVGRA-LEDLGYSWFEEPVQHYHVGAMGEVAQRLD--ITVSAGEQ-T 251 (393)
T ss_dssp CCEEEEC----------------TTCCCHHHHHHHHHH-HHHTTCSEEECCSCTTCHHHHHHHHHHCS--SEEEBCTT-C
T ss_pred CEEEECC----------------CCCCCHHHHHHHHHH-HHHCCCCEEECCCCCCCHHHHHHHHHCCC--CCCCCCCC-C
T ss_conf 4698446----------------668999999999999-98618525636876224578998742478--33117888-7
Q ss_pred CCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHC
Q ss_conf 2148885210038652234254530038999999999998798699950788872358998999819
Q gi|254780670|r 315 TNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVATN 381 (424)
Q Consensus 315 Tn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~~ 381 (424)
.+..-++..+.. .++.+-+|+..+|-+|++++.+++|+.+|..+ +.|.. ++.=.+.+.+.++..
T Consensus 252 ~~~~~~~~~i~~-~~d~~~~d~~~~GGit~~~~i~~lA~~~gi~v-~~h~~-~~~i~~~a~lhl~aa 315 (393)
T 3n4e_A 252 YTLQALKDLILS-GVRMVQPDIVKMGGITGMMQCAALAHAHGVEF-VPHQT-QPGVGHFANIHVLST 315 (393)
T ss_dssp CSHHHHHHHHHH-TCCEECCCTTTTTHHHHHHHHHHHHHHHTCEE-CCCCC-CSSHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHH-CCCCCCCCCHHCCCHHHHHHHHHHHHHCCCEE-EECCC-CHHHHHHHHHHHHHH
T ss_conf 899999999864-64523553020477899999999999879869-87888-409999999999985
No 33
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=99.73 E-value=7e-14 Score=121.52 Aligned_cols=299 Identities=18% Similarity=0.205 Sum_probs=206.5
Q ss_pred CEEEEEEEEE--------EEECCCC----CEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHH
Q ss_conf 9105899868--------8607978----429999998489767663447866477546762689865168048999999
Q gi|254780670|r 1 MFINDIIARE--------VIDSRGS----PTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAF 68 (424)
Q Consensus 1 m~I~~i~~r~--------IlDSRG~----PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~ 68 (424)
|+|++|..+. +-.|+|. ..+=|+|.+++|.+|.+-+..-.. +.|.+.......+.
T Consensus 6 ~kI~~i~~~~~~~Pl~~p~~~s~g~~~~~~~~~v~i~~~~G~~G~GE~~~~~~-------------~~~~~e~~~~~~~~ 72 (383)
T 3i4k_A 6 LTIQKVESRILDVPLIRPHGFATTTSTEQHILLVSVHLENGVIGYGEGVVPGG-------------PWWGGESVETMKAL 72 (383)
T ss_dssp CBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEECCSSS-------------TTTTSCCHHHHHHH
T ss_pred CEEEEEEEEEEECCCCCCEECCCEEEEEEEEEEEEEEECCCCEEEEEEECCCC-------------CCCCCCCHHHHHHH
T ss_conf 88999999999725678878767899888999999998999999976406888-------------76461439999999
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEEC
Q ss_conf 98756789759885578988864653036643221232222024489987526634984888225324564754300000
Q gi|254780670|r 69 VNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNIL 148 (424)
Q Consensus 69 in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~Nii 148 (424)
++..++|.|+|+++.+-..+...+...-+ ....+.-|+.+|++-+.++..++|+|+.|++.....+|+-. -+
T Consensus 73 i~~~l~~~l~g~~~~~~~~~~~~~~~~~~------~~~~a~said~AlwDl~~k~~~~pl~~llg~~~~~~~~~~~--~~ 144 (383)
T 3i4k_A 73 VDGYLAPVLIGRAVSELAGIMADLERVVA------RARYAKAAVDVAMHDAWARSLNVPVRDLLGGTVRDKVDVTW--AL 144 (383)
T ss_dssp HHHTTHHHHTTSBGGGHHHHHHHHHHHCC------SCHHHHHHHHHHHHHHHHHHTTSBGGGGTTCCSCSEEEBCE--EE
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHCC------CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE--EE
T ss_conf 99977699729982668999998875312------10789999999887898887198630026985455550478--62
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC---CCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 36645567766102565148877489998999999999998752000013---676557644886846899999999997
Q gi|254780670|r 149 NGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYST---NVGDEGGFSPNLKTADSALDLIANSIE 225 (424)
Q Consensus 149 nGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t---~vgDEGGfap~~~~~eeaL~ll~eAi~ 225 (424)
+...-.+.+....+ ...+.|+.+ .+| ..+.++-++.+..+.+
T Consensus 145 --------------------~~~~~~~~~~~~~~-------~~~~~G~~~~KiKi~--------~~~~~~d~~~~~~i~~ 189 (383)
T 3i4k_A 145 --------------------GVLPLDVAVAEIEE-------RIEEFGNRSFKLKMG--------AGDPAEDTRRVAELAR 189 (383)
T ss_dssp --------------------CSCCHHHHHHHHHH-------HHHHHCCSEEEEECC--------SSCHHHHHHHHHHHHH
T ss_pred --------------------CCCCHHHHHHHHHH-------HHHHHCCCEEEECCC--------CCCHHHHHHHHHHHHH
T ss_conf --------------------14774778999999-------998634642653147--------8987999999999998
Q ss_pred HCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCE
Q ss_conf 53853111023431104653202785111146865687899999998765448699776763104237998864238836
Q gi|254780670|r 226 KAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNC 305 (424)
Q Consensus 226 ~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~ 305 (424)
..| .++.+.+|+. ...+.++-+++.. .+++|.+..+|+|+..+||++.+.+.+..+ +
T Consensus 190 ~~~----~~~~l~~DaN----------------~~~~~~~a~~~~~-~l~~~~~~~~E~P~~~~d~~~~~~l~~~~~--i 246 (383)
T 3i4k_A 190 EVG----DRVSLRIDIN----------------ARWDRRTALHYLP-ILAEAGVELFEQPTPADDLETLREITRRTN--V 246 (383)
T ss_dssp TTT----TTSEEEEECT----------------TCSCHHHHHHHHH-HHHHTTCCEEESCSCTTCHHHHHHHHHHHC--C
T ss_pred HCC----CCCEEECCCC----------------CCCCHHHHHHHHH-HHHHCCCCEEECCCCCCCHHHHHHHHHHCC--C
T ss_conf 607----7530311423----------------4799999999876-566539532204777225588999997068--9
Q ss_pred EEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHH--HHHHHH
Q ss_conf 850430000214888521003865223425453003899999999999879869995078887235899--899981
Q gi|254780670|r 306 QLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIA--DLAVAT 380 (424)
Q Consensus 306 ~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~ia--DLAVg~ 380 (424)
.|.+|.-.. ++..+.+.++.++++.+.+|+..+|.+|++++.+++|+++|+.+++++- .|+.=...+ ++|-++
T Consensus 247 pia~dEs~~-~~~~~~~~~~~~~~d~i~ik~~~~GGit~~~~i~~~a~~~gi~~~~~~~-~~s~i~~aa~~hlaa~~ 321 (383)
T 3i4k_A 247 SVMADESVW-TPAEALAVVKAQAADVIALKTTKHGGLLESKKIAAIAEAGGLACHGATS-LEGPIGTAASLQFAAST 321 (383)
T ss_dssp EEEESTTCS-SHHHHHHHHHHTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCEEEECCS-CCCHHHHHHHHHHHHHC
T ss_pred CCCCCCCHH-HHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCC-CCCHHHHHHHHHHHHHC
T ss_conf 865886203-2555899998613671766764689799999999999987997985798-76699999999999848
No 34
>2oqh_A Putative isomerase; PSI-II, PSI-2, NYSGXRC, enolase, TIM barrel, structural genomics, protein structure initiative; 1.98A {Streptomyces coelicolor A3}
Probab=99.73 E-value=2.1e-15 Score=132.78 Aligned_cols=303 Identities=16% Similarity=0.152 Sum_probs=201.2
Q ss_pred CEEEEEEEEEEE--------ECCC----CCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHH
Q ss_conf 910589986886--------0797----8429999998489767663447866477546762689865168048999999
Q gi|254780670|r 1 MFINDIIAREVI--------DSRG----SPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAF 68 (424)
Q Consensus 1 m~I~~i~~r~Il--------DSRG----~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~ 68 (424)
|+|++|..+.+- .|.| +..|=|+|++++|..|.+-++.+ ..+ ..
T Consensus 3 MKI~~i~~~~~~iPl~~p~~~s~~~~~~~~~vlV~i~t~~G~~G~GE~~~~--------------------~~~----~~ 58 (385)
T 2oqh_A 3 LKITDVDVWVVNLPLVNPFTSSFETKTGETRTVVRVRTDSGVEGWGETMWG--------------------APV----AA 58 (385)
T ss_dssp CCEEEEEEEEEEECBCCCC--------CEEEEEEEEEETTSCEEEEEEECS--------------------HHH----HH
T ss_pred CEEEEEEEEEEECCCCCCEECCCEEEEEEEEEEEEEEECCCCEEEEECCCC--------------------CCH----HH
T ss_conf 389699999996346786577671697789999999989999999834688--------------------309----99
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEEC
Q ss_conf 98756789759885578988864653036643221232222024489987526634984888225324564754300000
Q gi|254780670|r 69 VNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNIL 148 (424)
Q Consensus 69 in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~Nii 148 (424)
+.+.++|.|+|+++.+...+-+.|..+.. ....++..++.|+.+|++-+.++..++|||++|++....++|+-. .+
T Consensus 59 ~~~~l~~~liG~~~~~~~~~~~~~~~~~~--~~~~~~~~a~said~AlwDl~gk~~~~pl~~llgg~~r~~ip~y~--s~ 134 (385)
T 2oqh_A 59 IVRRMAPDLIGTSPFALEAFHRKQHMVPF--FYGYLGYAAIAAVDVACWDAMGKATGQSVTDLLGGAVRDEVPITA--LI 134 (385)
T ss_dssp HHHHHGGGTTTSCTTCHHHHHHHTTTHHH--HHHHHHHHHHHHHHHHHHHHHHHHHTCBHHHHTTCCSCSEEEEEE--EE
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE--EE
T ss_conf 99999999749987789998765433310--246336899999999999998531123224440477677357899--98
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCCHHHH-HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 3664556776610256514887748999-899999999999875200001367655764488684689999999999753
Q gi|254780670|r 149 NGGIHADNALDFQEFMIMPVGAENIREA-IRMGAEVFHTLKKELKSKGYSTNVGDEGGFSPNLKTADSALDLIANSIEKA 227 (424)
Q Consensus 149 nGG~HA~~~l~iQEfmIiP~g~~sf~ea-l~~~~ev~~~lk~~L~~~g~~t~vgDEGGfap~~~~~eeaL~ll~eAi~~a 227 (424)
+.+.... ....+. -.+..+.... ++..++..-.- -|+. +.++-++.+ +++.++
T Consensus 135 ~~~~~~~---------------~~~~~~~~~~~~~~~~~----~~~~~~~~~k~-~~~~-----~~~~D~~~i-~~ir~~ 188 (385)
T 2oqh_A 135 TRADAPG---------------ATPADLPKAMAEHAVRV----VEEGGFDAVKL-KGTT-----DCAGDVAIL-RAVREA 188 (385)
T ss_dssp CGGGCSS---------------CCTTTHHHHHHHHHHHH----HHHHCCSEEEE-ECCS-----CHHHHHHHH-HHHHHH
T ss_pred EECCCCC---------------CCHHHHHHHHHHHHHHH----HHHCCCCEEEC-CCCC-----CHHHHHHHH-HHHHHH
T ss_conf 6446776---------------42455589999998888----87427632421-5776-----607689999-999986
Q ss_pred CCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEEE
Q ss_conf 85311102343110465320278511114686568789999999876544869977676310423799886423883685
Q gi|254780670|r 228 GYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQL 307 (424)
Q Consensus 228 Gy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~I 307 (424)
. + |+.|.+|+ +.-.|.++-+.+... +++|++.++|+|+. |+++.+.+..+.+ +-|
T Consensus 189 ~--~--d~~i~vDa----------------N~~~~~~~A~~~~~~-l~~~~l~~~EeP~~--~~~~~~~l~~~~~--ipI 243 (385)
T 2oqh_A 189 L--P--GVNLRVDP----------------NAAWSVPDSVRAGIA-LEELDLEYLEDPCV--GIEGMAQVKAKVR--IPL 243 (385)
T ss_dssp C--T--TSEEEEEC----------------TTCSCHHHHHHHHHH-HGGGCCSEEECCSS--HHHHHHHHHHHCC--SCE
T ss_pred C--C--CCEEECCC----------------CCCCCHHHHHHHHHH-CCCCCCCEECCCCH--HHHHHHHHHHCCC--CCC
T ss_conf 7--9--98251037----------------988788999998874-02389752127510--1123455422136--872
Q ss_pred ECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCH
Q ss_conf 04300002148885210038652234254530038999999999998798699950788872358998999819980
Q gi|254780670|r 308 VGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVATNCGQ 384 (424)
Q Consensus 308 vGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~~a~~ 384 (424)
.+|.- ++++.-+++.++.++++.+-+|+..+|.++++++.+++|+.+|..++++ ..+|+.=...++|+++...+.
T Consensus 244 a~gEs-~~~~~~~~~~i~~~~~d~~~~d~~~~GGit~~~~i~~~A~~~gi~~~~h-~~~~~~i~~aa~l~~~~~~~~ 318 (385)
T 2oqh_A 244 CTNMC-VVRFEDFAPAMRLNAVDVIHGDVYKWGGIAATKALAAHCETFGLGMNLH-SGGELGIATAAHLAVVSSTPV 318 (385)
T ss_dssp EESSS-CCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEEC-CSSCCHHHHHHHHHHHHHCTT
T ss_pred CCCCC-CCCHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEE-CCCHHHHHHHHHHHHHHCCCC
T ss_conf 06744-2221658988764168878437642588899999999999869978997-883899999999999845965
No 35
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, enolase superfamily, TIM barrel; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=99.73 E-value=7e-15 Score=128.94 Aligned_cols=296 Identities=17% Similarity=0.187 Sum_probs=191.4
Q ss_pred CEEEEEEEEEEE--------ECC-----CCC-----EEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHH
Q ss_conf 910589986886--------079-----784-----29999998489767663447866477546762689865168048
Q gi|254780670|r 1 MFINDIIAREVI--------DSR-----GSP-----TIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGV 62 (424)
Q Consensus 1 m~I~~i~~r~Il--------DSR-----G~P-----TvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV 62 (424)
|.|++|..+.+. +++ ..| .|=|+|.|++|.+|.+-+.++- .-
T Consensus 13 ~rI~~i~~~~~~~Pl~~P~~~~~~~~~~~~~~~~~~~v~V~i~td~G~~G~GE~~~~~--------------------~~ 72 (393)
T 2og9_A 13 DRITWVRISSCYLPLATPISDAKVLTGRQKPMTEIAILFAEIETAGGHQGLGFSYSKR--------------------AG 72 (393)
T ss_dssp CCEEEEEEEEEEEECSSCCC------------CEEEEEEEEEEETTSCEEEEEEEEES--------------------TT
T ss_pred CCEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCEEEEEEECCC--------------------CC
T ss_conf 8842799999991578874455343466622678889999999899989999874887--------------------76
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCC
Q ss_conf 99999998756789759885578988864653036643221232222024489987526634984888225324564754
Q gi|254780670|r 63 LKAIAFVNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPV 142 (424)
Q Consensus 63 ~~Av~~in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~ 142 (424)
..++..+.+.++|.|+|+|+.|...+-+.|.......+...+...++-|+.+|++-+.++..++|||+.|++.... +
T Consensus 73 ~~~~~~~~~~l~p~liG~d~~~i~~~~~~l~~~~~~~~~~~~~~~A~said~AlwDl~gK~~~~Pl~~LLGg~~~~---~ 149 (393)
T 2og9_A 73 GPGQFAHAREIAPALIGEDPSDIAKLWDKLCWAGASAGRSGLSTQAIGAFDVALWDLKAKRAGLSLAKLLGSYRDS---V 149 (393)
T ss_dssp HHHHHHHHHHHGGGGTTSCTTCHHHHHHHHHHTTGGGCSSSHHHHHHHHHHHHHHHHHHHHTTCBHHHHHCCSCSE---E
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC---C
T ss_conf 8999999999999876998678999999999841112666526889999999999999876364368761876455---5
Q ss_pred CCEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC---CCCCCCCCCCCCCCHHHHHHH
Q ss_conf 30000036645567766102565148877489998999999999998752000013---676557644886846899999
Q gi|254780670|r 143 PLMNILNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYST---NVGDEGGFSPNLKTADSALDL 219 (424)
Q Consensus 143 P~~NiinGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t---~vgDEGGfap~~~~~eeaL~l 219 (424)
|.....++.. ..+..+.++.+ +.+.++|+.+ .+|.. ..++-++.
T Consensus 150 ~~~~~~~~~~-----------------~~~~e~~~~~a--------~~~~~~Gf~~~K~k~g~~--------~~~~d~~~ 196 (393)
T 2og9_A 150 RCYNTSGGFL-----------------HTPIDQLMVNA--------SASIERGIGGIKLKVGQP--------DGALDIAR 196 (393)
T ss_dssp EEEBCTTCCT-----------------TSCHHHHHHHH--------HHHHHTTCCCEEEECCCS--------CHHHHHHH
T ss_pred CEEEECCCCC-----------------CCCHHHHHHHH--------HHHHHCCCCCCCCCCCCC--------CHHHHHHH
T ss_conf 3011014666-----------------89989999999--------999867987203456899--------77899999
Q ss_pred HHHHHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHH
Q ss_conf 99999753853111023431104653202785111146865687899999998765448699776763104237998864
Q gi|254780670|r 220 IANSIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTN 299 (424)
Q Consensus 220 l~eAi~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~ 299 (424)
+...-+. .|.++.|.+|+ +...+.++-+.+.. .+++|.+.++|+|+..+|++++.++..
T Consensus 197 v~~ir~~----~g~~~~l~vDa----------------N~~~~~~~a~~~~~-~l~~~~l~~iEeP~~~~~~~~~~~l~~ 255 (393)
T 2og9_A 197 VTAVRKH----LGDAVPLMVDA----------------NQQWDRPTAQRMCR-IFEPFNLVWIEEPLDAYDHEGHAALAL 255 (393)
T ss_dssp HHHHHHH----HCTTSCEEEEC----------------TTCCCHHHHHHHHH-HHGGGCCSCEECCSCTTCHHHHHHHHH
T ss_pred HHHHHHH----CCCCCEEEECC----------------CCCCCHHHHHHHHH-HHHHCCCCEEECCCCCCCHHHHHHHHH
T ss_conf 9999986----59772686456----------------76789999999998-644429853105898436789988762
Q ss_pred HCCCCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHH
Q ss_conf 23883685043000021488852100386522342545300389999999999987986999507888723589989998
Q gi|254780670|r 300 KIGSNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVA 379 (424)
Q Consensus 300 ~~g~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg 379 (424)
+.+- -|.+|.- +..+......++.++++.+.+|+..+|-+|++++.+.+|+.+|+.+++ |-+ -..-+||+.+
T Consensus 256 ~~~i--pia~gE~-~~~~~~~~~~i~~~a~d~v~~d~~~~GGit~~~~ia~~A~~~gi~v~~-h~~----~~a~~hl~aa 327 (393)
T 2og9_A 256 QFDT--PIATGEM-LTSAAEHGDLIRHRAADYLMPDAPRVGGITPFLKIASLAEHAGLMLAP-HFA----MELHVHLAAA 327 (393)
T ss_dssp HCSS--CEEECTT-CCSHHHHHHHHHTTCCSEECCCHHHHTSHHHHHHHHHHHHHTTCEECC-CSC----HHHHHHHHHT
T ss_pred CCCC--CCCCCCC-CCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEE-CHH----HHHHHHHHHH
T ss_conf 3774--4448853-178888899997478765743565568799999999999985998975-649----9999999996
Q ss_pred HC
Q ss_conf 19
Q gi|254780670|r 380 TN 381 (424)
Q Consensus 380 ~~ 381 (424)
+.
T Consensus 328 ~~ 329 (393)
T 2og9_A 328 YP 329 (393)
T ss_dssp SS
T ss_pred CC
T ss_conf 78
No 36
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=99.73 E-value=1e-15 Score=135.15 Aligned_cols=300 Identities=17% Similarity=0.197 Sum_probs=197.7
Q ss_pred CEEEEEEEEEE---E-----ECCC-----CCEEEEEEEECCCCEEEEECCCC-CCCCCCEEEEECCCCCCCCCCHHHHHH
Q ss_conf 91058998688---6-----0797-----84299999984897676634478-664775467626898651680489999
Q gi|254780670|r 1 MFINDIIAREV---I-----DSRG-----SPTIEVDVCLEDGSTGRAMVPSG-ASTGIHEAFELRDQEKRYFGKGVLKAI 66 (424)
Q Consensus 1 m~I~~i~~r~I---l-----DSRG-----~PTvEvev~~~~g~~gra~~PSG-aStG~~Ea~elrD~~~~~~G~gV~~Av 66 (424)
++|++|....+ | .+.| ..++=|+|++++|..|.+-++.. ..++. ...+.
T Consensus 6 ~~I~~i~~~~~~~Pl~~~~~~~~~~~~~~~~~~lV~i~t~~G~~G~GE~~p~~~~~~~-----------------~~~~~ 68 (377)
T 3my9_A 6 SVVERIRIFLVESPIKMARLQGVGNVKGSVKRVLLEVTSADGIVGWGEAAPWEVFTGT-----------------PEAAF 68 (377)
T ss_dssp CBEEEEEEEEEEECEEC----------CCEEEEEEEEEETTSCEEEEEECCC-----C-----------------HHHHH
T ss_pred CEEEEEEEEEEEECCCCCCEEEEEEEEEEEEEEEEEEEECCCCEEEEECCCCCCCCCC-----------------HHHHH
T ss_conf 6787999999983323651766107953268999999989999999746667777878-----------------99999
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHH-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCE
Q ss_conf 9998756789759885578988864653-036643221232222024489987526634984888225324564754300
Q gi|254780670|r 67 AFVNDEIRTALLGCDARDQLLIDKIMID-LDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLM 145 (424)
Q Consensus 67 ~~in~~i~~~L~g~~~~dQ~~iD~~Li~-lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~ 145 (424)
..+++.++|.|+|+++.+...+=..|.. ..+ -..+..|+.+|++-+.++..++|||+.|++...... |..
T Consensus 69 ~~i~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-------~~~a~said~AlwDl~gk~~~~pl~~lLG~~~~~~~--~~~ 139 (377)
T 3my9_A 69 SALDIYLRPLILGAPIKRVRELMARMDKMLVG-------HGEAKAAVEMALLDILGKATGLSVADLLGGRVRDRI--PLS 139 (377)
T ss_dssp HHHHTTTHHHHTTCBTTCHHHHHHHHHHHSCS-------CHHHHHHHHHHHHHHHHHHHTCBTTGGGTCCSCSEE--EBC
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC-------CHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCE--EEE
T ss_conf 99999988987699866799999876542247-------578999999999997334159713540467755312--554
Q ss_pred EECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 00036645567766102565148877489998999999999998752000013676557644886846899999999997
Q gi|254780670|r 146 NILNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYSTNVGDEGGFSPNLKTADSALDLIANSIE 225 (424)
Q Consensus 146 NiinGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t~vgDEGGfap~~~~~eeaL~ll~eAi~ 225 (424)
..+.+ .+..+.... .+..+ ++|+.+-.-. +......+-+..+....+
T Consensus 140 ~~~~~--------------------~~~~~~~~~-------~~~~~-~~g~~~~kiK-----v~~~~~~~d~~~i~~i~~ 186 (377)
T 3my9_A 140 FSIAD--------------------PDFDADLER-------MRAMV-PAGHTVFKMK-----TGVKPHAEELRILETMRG 186 (377)
T ss_dssp EEECC--------------------SSHHHHHHH-------HHHHT-TTTCCEEEEE-----CSSSCHHHHHHHHHHHHH
T ss_pred EECCC--------------------CCHHHHHHH-------HHHHH-HCCCCCCCCC-----CCCCCCHHHHHHHHHHHH
T ss_conf 20257--------------------737788999-------99987-5055200134-----567660899999999998
Q ss_pred HCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCE
Q ss_conf 53853111023431104653202785111146865687899999998765448699776763104237998864238836
Q gi|254780670|r 226 KAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNC 305 (424)
Q Consensus 226 ~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~ 305 (424)
.. |.++.|.+|+ ++. +|.++-+++... +++|.+.++|+||..+|++++.+|.+..+ +
T Consensus 187 ~~----~~~~~l~vDa-------N~~---------~~~~~a~~~~~~-l~~~~l~~iEeP~~~~~~~~~~~L~~~~~--i 243 (377)
T 3my9_A 187 EF----GERIDLRLDF-------NQA---------LTPFGAMKILRD-VDAFRPTFIEQPVPRRHLDAMAGFAAALD--T 243 (377)
T ss_dssp HH----GGGSEEEEEC-------TTC---------CCTTTHHHHHHH-HHTTCCSCEECCSCTTCHHHHHHHHHHCS--S
T ss_pred HC----CCCEEEEECC-------CCC---------CCHHHHHHHHHH-HHHHHCCCCHHCCCCCCHHHHHHHHHCCC--C
T ss_conf 62----8853377064-------558---------999999999766-66540012011277348777568885279--8
Q ss_pred EEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCH
Q ss_conf 8504300002148885210038652234254530038999999999998798699950788872358998999819980
Q gi|254780670|r 306 QLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVATNCGQ 384 (424)
Q Consensus 306 ~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~~a~~ 384 (424)
.|.+|. .+.++..+.+.++.++++.+.+|+..+|.+|++++.+++|+.+|+.++++| ..|+.=.+-+.+.++...+.
T Consensus 244 pia~dE-s~~~~~~~~~~i~~~~~d~v~~d~~~~GGit~~~~i~~~A~~~gi~~~~~~-~~~s~i~~aa~~hlaaa~p~ 320 (377)
T 3my9_A 244 PILADE-SCFDAVDLMEVVRRQAADAISVKIMKCGGLMKAQSLMAIADTAGLPGYGGT-LWEGGIALAAGTQLIAATPG 320 (377)
T ss_dssp CEEEST-TCSSHHHHHHHHHHTCCSEEECCHHHHTSHHHHHHHHHHHHHHTCCEECCE-ECCSHHHHHHHHHHHHTCTT
T ss_pred CCCCCE-EEEEECHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECC-CCCCHHHHHHHHHHHHHCCC
T ss_conf 814761-476301255666427775126353324889999999989998699888689-88779999999999996889
No 37
>2qde_A Mandelate racemase/muconate lactonizing enzyme family protein; PSI-II, NYSGXRC, enolase, structural genomics, protein structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=99.73 E-value=1.2e-14 Score=127.29 Aligned_cols=296 Identities=18% Similarity=0.231 Sum_probs=202.4
Q ss_pred CEEEEEEEEEEE--------EC----CCCCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHH
Q ss_conf 910589986886--------07----978429999998489767663447866477546762689865168048999999
Q gi|254780670|r 1 MFINDIIAREVI--------DS----RGSPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAF 68 (424)
Q Consensus 1 m~I~~i~~r~Il--------DS----RG~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~ 68 (424)
|+|++|..+.+= .| +-.+++=|+|++++|..|.+-+.. +. ..|.|.........
T Consensus 3 MkI~~i~~~~~~~Pl~~~~~~~~~~~~~~~~~~V~i~t~~G~~G~GE~~~--~~------------~~~~~~~~~~v~~~ 68 (397)
T 2qde_A 3 LKITKVEVIPISTPMKRAQLMRGATLARIDGVLLKLHSDEGLVGIADAGD--TS------------SWYRGETQDSITSM 68 (397)
T ss_dssp CCEEEEEEEEEEECCCC-----------EEEEEEEEEETTSCEEEEECCC--CC------------TTTTCCCHHHHHHH
T ss_pred CEEEEEEEEEEEECCCCCEECCCEEEEEEEEEEEEEEECCCCEEEEEEEC--CC------------CCCCCCCHHHHHHH
T ss_conf 68999999998632578655477389887899999998999999997657--87------------77475579999999
Q ss_pred HHHHHHHH-HCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEE
Q ss_conf 98756789-75988557898886465303664322123222202448998752663498488822532456475430000
Q gi|254780670|r 69 VNDEIRTA-LLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNI 147 (424)
Q Consensus 69 in~~i~~~-L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~Ni 147 (424)
+++.+.|. |+|+++.+...+-+.|..+.. .+.-++.|+.+|++-+.++..++|||+.|++.... ++|....
T Consensus 69 i~~~~~~~~lig~~~~~~e~~~~~l~~~~~------~~~~a~said~AlwDl~gK~~~~Pl~~llG~~~~~--~i~~~~~ 140 (397)
T 2qde_A 69 ICDFFAPKVLLGEDPTKIEKIVGRMDILTR------DNNQAKATVDFALHDLVGKRFGVPVYQLLGGKTIE--RIPLGLV 140 (397)
T ss_dssp HHHTHHHHTTTTCCTTCHHHHHHHHHHHCS------SCHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCSCS--SEEBCEE
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHCCC------CCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCC--CCCCCCC
T ss_conf 998650797759987899999986442046------62689999999999985151698756325997576--4320134
Q ss_pred CCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC---CCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 036645567766102565148877489998999999999998752000013---67655764488684689999999999
Q gi|254780670|r 148 LNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYST---NVGDEGGFSPNLKTADSALDLIANSI 224 (424)
Q Consensus 148 inGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t---~vgDEGGfap~~~~~eeaL~ll~eAi 224 (424)
+.+ .+..+..+.. ++.. +.|+.+ .+|. +.++-++.+..+.
T Consensus 141 ~~~--------------------~~~~~~~~~~-------~~~~-~~g~~~~K~k~g~---------~~~~d~~~~~~ir 183 (397)
T 2qde_A 141 LGA--------------------GEPEAVAEEA-------LAVL-REGFHFVKLKAGG---------PLKADIAMVAEVR 183 (397)
T ss_dssp CCC--------------------SCHHHHHHHH-------HHHH-HHTCSCEEEECCS---------CHHHHHHHHHHHH
T ss_pred CCC--------------------CCHHHHHHHH-------HHHH-HCCCCEEECCCCC---------CHHHHHHHHHHHH
T ss_conf 468--------------------9989999999-------9876-2486422035777---------5378999999999
Q ss_pred HHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCC
Q ss_conf 75385311102343110465320278511114686568789999999876544869977676310423799886423883
Q gi|254780670|r 225 EKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSN 304 (424)
Q Consensus 225 ~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~ 304 (424)
+.. |.++.|.+|+- ...+.++-+.+.. .+++|++.++|+|+..+|+++.++|.++.+
T Consensus 184 ~~~----g~~~~l~vDaN----------------~~~~~~~A~~~~~-~l~~~~~~wiEeP~~~~d~~~l~~l~~~~~-- 240 (397)
T 2qde_A 184 RAV----GDDVDLFIDIN----------------GAWTYDQALTTIR-ALEKYNLSKIEQPLPAWDLDGMARLRGKVA-- 240 (397)
T ss_dssp HHH----CTTSCEEEECT----------------TCCCHHHHHHHHH-HHGGGCCSCEECCSCTTCHHHHHHHHTTCS--
T ss_pred HHC----CCCCEEECCCC----------------CCCCHHHHHHHHH-HHHHCCCCCCCCCCCCCCHHHHHHHHHCCC--
T ss_conf 872----99858982567----------------7647899999855-577619803324667434466666542147--
Q ss_pred EEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHH--HHHHHHHHH
Q ss_conf 6850430000214888521003865223425453003899999999999879869995078887235--899899981
Q gi|254780670|r 305 CQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDH--TIADLAVAT 380 (424)
Q Consensus 305 ~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~--~iaDLAVg~ 380 (424)
+-|.+|.- +.+..-+++.++.++++.+.+|+.-+|.+|++++.+.+|+++|..+++++ ..|+.=. ..+||+-+.
T Consensus 241 ipia~dEs-~~~~~d~~~~i~~~~~d~v~~d~~~~GGit~~~~i~~~A~~~gi~~~~~~-~~~s~i~~~a~~hl~aa~ 316 (397)
T 2qde_A 241 TPIYADES-AQELHDLLAIINKGAADGLMIKTQKAGGLLKAQRWLTLARLANLPVICGC-MVGSGLEASPAAHLLAAN 316 (397)
T ss_dssp SCEEESTT-CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCCEEECC-CSCCHHHHHHHHHHHHHC
T ss_pred CCCCCCEE-EEEHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCEEECC-CCCCHHHHHHHHHHHHHH
T ss_conf 88506610-02046599998657867242176527829999999999998699888658-875589999999999832
No 38
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, structural genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima MSB8} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=99.73 E-value=7.4e-15 Score=128.75 Aligned_cols=293 Identities=19% Similarity=0.280 Sum_probs=197.0
Q ss_pred CEEEEEEEE--------EEEECCCCCE----EEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHH
Q ss_conf 910589986--------8860797842----9999998489767663447866477546762689865168048999999
Q gi|254780670|r 1 MFINDIIAR--------EVIDSRGSPT----IEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAF 68 (424)
Q Consensus 1 m~I~~i~~r--------~IlDSRG~PT----vEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~ 68 (424)
+.|++|+.. -+-.|+|..| |-|+|.+++|..|.+-+... ..|.|..+ .++..
T Consensus 2 ~kI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~v~l~t~~G~~G~GE~~p~---------------~~~~~~~~-~~~~~ 65 (345)
T 2zad_A 2 SRIVNVKLSLKRYEYEKPFHITGSVSSESRNVEVEIVLESGVKGYGEASPS---------------FRVNGERV-EALLA 65 (345)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCEEEEEECCC---------------HHHHCCCH-HHHHH
T ss_pred CCEEEEEEEEEEEECCCCEEECCEEEEEEEEEEEEEEECCCCEEEEECCCC---------------CCCCCCCH-HHHHH
T ss_conf 976789999999715696680798999999999999989899999860388---------------88784479-99999
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEEC
Q ss_conf 98756789759885578988864653036643221232222024489987526634984888225324564754300000
Q gi|254780670|r 69 VNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNIL 148 (424)
Q Consensus 69 in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~Nii 148 (424)
+.+.++|.|+|+++.+...+.+.+..+-+- .-+.-|+.+|++-+.|+..++|||++|++.. . ++|....+
T Consensus 66 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-------~~a~saie~Al~Dl~~k~~~~pl~~llGg~~-~--~i~~~~~i 135 (345)
T 2zad_A 66 IENAVREMITGIDVRNYARIFEITDRLFGF-------PSLKAAVQFATLDALSQELGTQVCYLLGGKR-D--EIETDKTV 135 (345)
T ss_dssp THHHHHHHHTTCBGGGHHHHHHHHTTCTTS-------HHHHHHHHHHHHHHHHHHHTSCHHHHTTCCC-S--EEEBCEEE
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHHHHHCCCCEECCCCCC-C--CCCCCCCC
T ss_conf 999989986188703477799999862175-------9999999999999977661885123068843-3--20231025
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 3664556776610256514887748999899999999999875200001---3676557644886846899999999997
Q gi|254780670|r 149 NGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYS---TNVGDEGGFSPNLKTADSALDLIANSIE 225 (424)
Q Consensus 149 nGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~---t~vgDEGGfap~~~~~eeaL~ll~eAi~ 225 (424)
+ ..+..+.++ .+++.+ ++|+. ..++. +.++-++.+ +++.
T Consensus 136 ~--------------------~~~~~~~~~-------~~~~~~-~~Gf~~~KiKv~~---------~~~~d~~~~-~~i~ 177 (345)
T 2zad_A 136 G--------------------IDTVENRVK-------EAKKIF-EEGFRVIKIKVGE---------NLKEDIEAV-EEIA 177 (345)
T ss_dssp C--------------------SCCHHHHHH-------HHHHHH-HTTCSEEEEECCS---------CHHHHHHHH-HHHH
T ss_pred C--------------------CCCHHHHHH-------HHHHHH-HCCCCCCCCCCCC---------CCHHHHHHH-HHHH
T ss_conf 7--------------------799999999-------999999-7588701346687---------708899999-9999
Q ss_pred HCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHH-CCEEEEECCCCCCCHHHHHHHHHHCCCC
Q ss_conf 538531110234311046532027851111468656878999999987654-4869977676310423799886423883
Q gi|254780670|r 226 KAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQ-YPIYSIEDGMSEDDWHGWKILTNKIGSN 304 (424)
Q Consensus 226 ~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~-yPI~sIEDP~~e~D~~gw~~l~~~~g~~ 304 (424)
+. +.++.|-+|+ +...+.++-+++...|-+. +.+.++|+|+..+||+++..+....+
T Consensus 178 ~~----~~~~~l~lDa----------------N~~~~~~~a~~~~~~l~~~~~~~~~~E~P~~~~~~~~~~~l~~~~~-- 235 (345)
T 2zad_A 178 KV----TRGAKYIVDA----------------NMGYTQKEAVEFARAVYQKGIDIAVYEQPVRREDIEGLKFVRFHSP-- 235 (345)
T ss_dssp HH----STTCEEEEEC----------------TTCSCHHHHHHHHHHHHHTTCCCSEEECCSCTTCHHHHHHHHHHSS--
T ss_pred HH----HCCCCEEEEC----------------CCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHCC--
T ss_conf 75----1476617760----------------7775689999999999874365513027898100568999985326--
Q ss_pred EEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC--HHHHHHHHHHHCC
Q ss_conf 68504300002148885210038652234254530038999999999998798699950788872--3589989998199
Q gi|254780670|r 305 CQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETE--DHTIADLAVATNC 382 (424)
Q Consensus 305 ~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETe--D~~iaDLAVg~~a 382 (424)
+.|+.|.- +++++-+.+.++.++++.+.+||.. |.++++++++++|+++|..++++ ...|+. -...+|||.+++.
T Consensus 236 ~pia~dE~-~~~~~~~~~~~~~~~~d~~~~k~~~-GGi~~~~~~~~~a~~~gi~~~~~-~~~e~~i~~~a~~hlaa~~~~ 312 (345)
T 2zad_A 236 FPVAADES-ARTKFDVMRLVKEEAVDYVNIKLMK-SGISDALAIVEIAESSGLKLMIG-CMGESSLGINQSVHFALGTGA 312 (345)
T ss_dssp SCEEESTT-CCSHHHHHHHHHHTCCSEEEECHHH-HHHHHHHHHHHHHHTTTCEEEEC-CSSCCHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCC-CCCHHHHHHHHHHCCCCEEEEECCC-CCHHHHHHHHHHHHHCCCEEEEC-CCCCCHHHHHHHHHHHHHCCC
T ss_conf 87306887-6899999999970888889984256-67489999999999869949982-885569999999999983899
No 39
>2hxt_A L-fuconate dehydratase; enolase superfamily, D- erythromohydroxamate, unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=99.72 E-value=3.3e-15 Score=131.31 Aligned_cols=315 Identities=19% Similarity=0.198 Sum_probs=191.4
Q ss_pred EEEEEEEEEEEE--CCC---------CC-----EEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHH
Q ss_conf 105899868860--797---------84-----29999998489767663447866477546762689865168048999
Q gi|254780670|r 2 FINDIIAREVID--SRG---------SP-----TIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKA 65 (424)
Q Consensus 2 ~I~~i~~r~IlD--SRG---------~P-----TvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~A 65 (424)
+|++|..|-|-= ||. .| .|-+++.+++|.+|.+-+.+ .|+|....
T Consensus 3 ~i~~~~~~~~r~p~~~~~~~s~~~~~~~~~~~~~v~i~~dt~~Gi~G~GE~~~-------------------~g~g~~~~ 63 (441)
T 2hxt_A 3 TIIALETHDVRFPTSRELDGSDAMNPDPDYSAAYVVLRTDGAEDLAGYGLVFT-------------------IGRGNDVQ 63 (441)
T ss_dssp BEEEEEEEEEECCGGGTTTTCCSSCSSCCCEEEEEEEEESSCTTCEEEEEEEE-------------------CSTTHHHH
T ss_pred EEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEC-------------------CCCCHHHH
T ss_conf 69999999998137788777667679998635899999945999889999638-------------------88858999
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHH-HHHHHHCCCCCCC------CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCC
Q ss_conf 99998756789759885578988-8646530366432------2123222202448998752663498488822532456
Q gi|254780670|r 66 IAFVNDEIRTALLGCDARDQLLI-DKIMIDLDGTPNK------SRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAH 138 (424)
Q Consensus 66 v~~in~~i~~~L~g~~~~dQ~~i-D~~Li~lDgT~nk------s~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~ 138 (424)
...+ +.++|.|+|+++.+-..+ +.+...+....+. ..+...++-|+.+|++-+.++..++|||+.|+|....
T Consensus 64 ~~~i-~~l~p~liG~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~A~saIDiALwDl~gK~~g~Pv~~LLGG~~~~ 142 (441)
T 2hxt_A 64 TAAV-AALAEHVVGLSVDKVIADLGAFARRLTNDSQLRWLGPEKGVMHMAIGAVINAAWDLAARAANKPLWRFIAELTPE 142 (441)
T ss_dssp HHHH-HTTHHHHTTCBHHHHHHCHHHHHHHHHTCHHHHHTCSSSHHHHHHHHHHHHHHHHHHHHHTTSBHHHHHHTSCHH
T ss_pred HHHH-HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCC
T ss_conf 9999-999998669986899999999999874065310036774088999999999999999998398799984565766
Q ss_pred CCCCCCE-EECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHH----HHHHHHHHHHCCCCC---CCCCCCC-----
Q ss_conf 4754300-00036645567766102565148877489998999999----999998752000013---6765576-----
Q gi|254780670|r 139 ILPVPLM-NILNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEV----FHTLKKELKSKGYST---NVGDEGG----- 205 (424)
Q Consensus 139 ~lP~P~~-NiinGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev----~~~lk~~L~~~g~~t---~vgDEGG----- 205 (424)
.+|.... +..+++ .+..++..+..+. ....+.. .++|+.. ..+..|.
T Consensus 143 ~~~~~~~~~~~~~~-------------------~~~d~~~~~~~~~~~~~~~~~~~~-~~~g~~~~k~~~~~~~~~~~~~ 202 (441)
T 2hxt_A 143 QLVDTIDFRYLSDA-------------------LTRDEALAILRDAQPQRAARTATL-IEQGYPAYTTSPGWLGYSDEKL 202 (441)
T ss_dssp HHHHHCCCTTCTTT-------------------CCHHHHHHHHHHHGGGHHHHHHHH-HHHCEEEEEEEEECTTSCHHHH
T ss_pred CCCCEEEEEECCCC-------------------CCHHHHHHHHHCCCHHHHHHHHHH-HHCCCCEEECCCCCCCCCHHHH
T ss_conf 65313666412787-------------------777889987630648999999998-7448735752566777876889
Q ss_pred -----------CC-C---CCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHH
Q ss_conf -----------44-8---86846899999999997538531110234311046532027851111468656878999999
Q gi|254780670|r 206 -----------FS-P---NLKTADSALDLIANSIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYL 270 (424)
Q Consensus 206 -----------fa-p---~~~~~eeaL~ll~eAi~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y 270 (424)
|. . .-.+.++-++.+..+-+.. |.++.|.+|+ +...+.++-+.+.
T Consensus 203 ~~~~~~~~~~g~~~~K~k~g~~~~~di~~i~~vR~~~----g~~~~L~vDa----------------N~~~~~~~Ai~~~ 262 (441)
T 2hxt_A 203 VRLAKEAVADGFRTIKLKVGANVQDDIRRCRLARAAI----GPDIAMAVDA----------------NQRWDVGPAIDWM 262 (441)
T ss_dssp HHHHHHHHHTTCSEEEEECCSCHHHHHHHHHHHHHHH----CSSSEEEEEC----------------TTCCCHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHH----CCCCEEECCC----------------CCCCCHHHHHHHH
T ss_conf 9999998763775120047877799999999999875----8996783455----------------6576579999999
Q ss_pred HHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHH
Q ss_conf 98765448699776763104237998864238836850430000214888521003865223425453003899999999
Q gi|254780670|r 271 ANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIE 350 (424)
Q Consensus 271 ~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~ 350 (424)
..| ++|.+.++|||+..+|+++..++.++.. .+-|.+|.. ++++..+++.|+.++++.+.+|+..+|-+|+++..+.
T Consensus 263 ~~L-~~~~l~wiEeP~~~~d~~~~~~~~~~~~-~ipIa~gE~-~~~~~~~~~~i~~~a~div~~d~~~~GGit~~~kia~ 339 (441)
T 2hxt_A 263 RQL-AEFDIAWIEEPTSPDDVLGHAAIRQGIT-PVPVSTGEH-TQNRVVFKQLLQAGAVDLIQIDAARVGGVNENLAILL 339 (441)
T ss_dssp HTT-GGGCCSCEECCSCTTCHHHHHHHHHHHT-TSCEEECTT-CCSHHHHHHHHHHTCCSEECCCTTTSSHHHHHHHHHH
T ss_pred HHH-HHHCCCCCCCCCCHHHHHHHHHHHHCCC-CCCCCCCCC-EEECCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 977-6515740018898566998876543157-887558842-2210002345532863223667454799999999999
Q ss_pred HHHHCCCEEEEECCCCCCCHHHHHHHHHHH
Q ss_conf 999879869995078887235899899981
Q gi|254780670|r 351 KAQMAGYPSIISHRSGETEDHTIADLAVAT 380 (424)
Q Consensus 351 ~a~~~g~~~ivShRSGETeD~~iaDLAVg~ 380 (424)
+|..+|..++ .|.+|...-+.+++++.+.
T Consensus 340 ~A~~~gi~v~-~H~~~~~~~~~~~~~~~a~ 368 (441)
T 2hxt_A 340 LAAKFGVRVF-PHAGGVGLCELVQHLAMAD 368 (441)
T ss_dssp HHHHTTCEEC-CCCCSTTHHHHHHHHHHHH
T ss_pred HHHHCCCEEE-ECCCCHHHHHHHHHHHHHH
T ss_conf 9998699699-7188288999999999632
No 40
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein structure initiative; 2.70A {Polaromonas SP}
Probab=99.71 E-value=6.7e-15 Score=129.09 Aligned_cols=298 Identities=17% Similarity=0.219 Sum_probs=196.0
Q ss_pred CEEEEEEEEEEE----------ECCC----CCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHH
Q ss_conf 910589986886----------0797----84299999984897676634478664775467626898651680489999
Q gi|254780670|r 1 MFINDIIAREVI----------DSRG----SPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAI 66 (424)
Q Consensus 1 m~I~~i~~r~Il----------DSRG----~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av 66 (424)
|+|++|.+..+- .++| +.+|=|+|+|++|.+|.+-+..+.+ .....
T Consensus 39 MkIt~Ie~~~v~~plp~~~~~~~~~g~~~~r~~vlVri~td~G~~G~GE~~p~~~--------------------~~~~~ 98 (428)
T 3bjs_A 39 MKITKINAIPLSYRLPEGKTVTMGVGSTIKRDAIIIRVETSEGITGYGEAHPGRS--------------------PGAIT 98 (428)
T ss_dssp CBEEEEEEEEEEEECC---CCBCSSCBCSEEEEEEEEEEETTSCEEEEEECCTTC--------------------HHHHH
T ss_pred CEEEEEEEEEEEEECCCCCCCEECCCCEEEEEEEEEEEEECCCCEEEEECCCCCC--------------------HHHHH
T ss_conf 8786999999754478887514333628985799999998999989997147888--------------------79999
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCC--CCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCC
Q ss_conf 9998756789759885578988864653036643221232--22202448998752663498488822532456475430
Q gi|254780670|r 67 AFVNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGA--NAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPL 144 (424)
Q Consensus 67 ~~in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGa--NailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~ 144 (424)
..+++.++|.|+|+++.+...+-+.|....-. .....++ .++-|+-+|++-+.++..++|||+.|++... .+|...
T Consensus 99 ~~i~~~l~p~liG~d~~~~~~l~~~l~~~~~~-~~~~~~~~~~A~saId~ALwDl~gK~~~~Pv~~LLGg~~~-~i~~~a 176 (428)
T 3bjs_A 99 SLIHNTIAPMLIGMKATDCVGAWQRVHRMQLS-SHGLGAGAALAISGIDMALWDIRGKAANMPLYELLGGSKR-RIPAYA 176 (428)
T ss_dssp HHHHHTTTTTTTTSBTTCHHHHHHHHHHHTTT-TTSCTHHHHHHHHHHHHHHHHHHHHHHTCBHHHHTTCCCC-CEEEEE
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCC-CCEEEE
T ss_conf 99999999997799815499999999986653-0476427799999999999999998842239998088755-421454
Q ss_pred EEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 00003664556776610256514887748999899999999999875200001---367655764488684689999999
Q gi|254780670|r 145 MNILNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYS---TNVGDEGGFSPNLKTADSALDLIA 221 (424)
Q Consensus 145 ~NiinGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~---t~vgDEGGfap~~~~~eeaL~ll~ 221 (424)
..+. .+..+-.+..+. .++.+ ++|+. ..+|. +.+.-++.+.
T Consensus 177 ~~~~-------------------~~~~~~e~~~~~-------~~~~~-~~Gf~~~KiKvg~---------~~~~D~~~v~ 220 (428)
T 3bjs_A 177 GGIA-------------------LGYQPKESLAEE-------AQEYI-ARGYKALKLRIGD---------AARVDIERVR 220 (428)
T ss_dssp ESSC-------------------SCSCCHHHHHHH-------HHHHH-HHTCSEEEEECCS---------CHHHHHHHHH
T ss_pred ECCC-------------------CCCCCHHHHHHH-------HHHHH-HCCCCEEEECCCC---------CHHHHHHHHH
T ss_conf 1133-------------------455899999999-------99998-6399748961798---------7188999999
Q ss_pred HHHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHC
Q ss_conf 99975385311102343110465320278511114686568789999999876544869977676310423799886423
Q gi|254780670|r 222 NSIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKI 301 (424)
Q Consensus 222 eAi~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~ 301 (424)
..-+.. |.++.|.+|+ ++ -.|.++-+.+...| ++|.+.++|+|+..+|+++..++.+..
T Consensus 221 ~iR~~~----g~~~~l~vDa-------N~---------~w~~~~A~~~~~~L-~~~~l~~iEeP~~~~d~~~~~~l~~~~ 279 (428)
T 3bjs_A 221 HVRKVL----GDEVDILTDA-------NT---------AYTMADARRVLPVL-AEIQAGWLEEPFACNDFASYREVAKIT 279 (428)
T ss_dssp HHHHHH----CTTSEEEEEC-------TT---------CCCHHHHHHHHHHH-HHTTCSCEECCSCTTCHHHHHHHTTTC
T ss_pred HHHHHC----CCCCEEEEEC-------CC---------CCCHHHHHHHHHHH-HCCCCCCEECCCCCCCHHHHHHHHHCC
T ss_conf 999971----9998299988-------99---------86568899989987-404765233686854789999999608
Q ss_pred CCCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHH--HHHHHH
Q ss_conf 883685043000021488852100386522342545300389999999999987986999507888723589--989998
Q gi|254780670|r 302 GSNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTI--ADLAVA 379 (424)
Q Consensus 302 g~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~i--aDLAVg 379 (424)
+ .+-|.+|. .+.++.-+.+.|+.++++.+-+|+...|-+|++++.+++|+.+|..++ .|-. ++.=... +||+.+
T Consensus 280 ~-~iPIa~dE-~~~~~~d~~~~i~~~a~dii~~d~~~~GGit~~~~i~~~A~~~gi~v~-~h~~-~~~i~~aa~lhl~aa 355 (428)
T 3bjs_A 280 P-LVPIAAGE-NHYTRFEFGQMLDAGAVQVWQPDLSKCGGITEGIRIAAMASAYRIPIN-AHSS-ATGLNHAATIHFLAA 355 (428)
T ss_dssp S-SSCEEECT-TCCSHHHHHHHHTTCCEEEECCBTTTSSCHHHHHHHHHHHHHTTCCBC-CBCC-SSHHHHHHHHHHHHH
T ss_pred C-CCEEEECC-CCCCHHHHHHHHHCCCCCEECCCCCEECCHHHHHHHHHHHHHCCCEEE-ECCC-CCHHHHHHHHHHHHH
T ss_conf 9-98187177-678999999999749942663685456979999999999998799899-6889-618999999999997
Q ss_pred HC
Q ss_conf 19
Q gi|254780670|r 380 TN 381 (424)
Q Consensus 380 ~~ 381 (424)
+.
T Consensus 356 ~~ 357 (428)
T 3bjs_A 356 TE 357 (428)
T ss_dssp CT
T ss_pred CC
T ss_conf 89
No 41
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase, target 9265M, PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=99.71 E-value=8.7e-15 Score=128.22 Aligned_cols=275 Identities=20% Similarity=0.206 Sum_probs=183.4
Q ss_pred CEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
Q ss_conf 42999999848976766344786647754676268986516804899999998756789759885578988864653036
Q gi|254780670|r 18 PTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAFVNDEIRTALLGCDARDQLLIDKIMIDLDG 97 (424)
Q Consensus 18 PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~in~~i~~~L~g~~~~dQ~~iD~~Li~lDg 97 (424)
+||=|+|.|++|.+|.+-+.++. .+...+++.++|.|+|+|+.+.+.+=+.|...--
T Consensus 59 ~~vlV~i~tddG~~G~Ge~~~~~-----------------------~~~~~i~~~l~~~liG~d~~~ie~l~~~m~~~~~ 115 (404)
T 3ekg_A 59 GTLVVEIEASDGNVGFAVTTGGE-----------------------PAAYIVEKHLARFLEGARVTDIERIWDQMYNSTL 115 (404)
T ss_dssp CEEEEEEEETTSCEEEEEEECHH-----------------------HHHHHHHHTTHHHHTTSBTTCHHHHHHHHHHHHG
T ss_pred CEEEEEEEECCCCEEEEEECCHH-----------------------HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 67999999899998999924818-----------------------8999999999999679981039999999998655
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHH
Q ss_conf 64322123222202448998752663498488822532456475430000036645567766102565148877489998
Q gi|254780670|r 98 TPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNILNGGIHADNALDFQEFMIMPVGAENIREAI 177 (424)
Q Consensus 98 T~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~NiinGG~HA~~~l~iQEfmIiP~g~~sf~eal 177 (424)
-....-+..+++-|+-+|++-+.++..++|||+.|++.....+|+-.. ++ .....-
T Consensus 116 ~~g~~g~~~~A~saID~ALWDl~gK~~~~Pv~~LLGg~~r~~v~~ya~----~~--------------------~~~~~~ 171 (404)
T 3ekg_A 116 YYGRKGLVINTISGVDLALWDLLGKVRREPVHQLLGGAVRDELQFYAT----GA--------------------RPDLAQ 171 (404)
T ss_dssp GGCSSTHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCSSSEEEEEEE----SS--------------------CHHHHH
T ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEEEE----CC--------------------CCHHHH
T ss_conf 417862788999999999999987670796999738876875688630----23--------------------220788
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCC
Q ss_conf 99999999999875200001367655764488684689999999999753853111023431104653202785111146
Q gi|254780670|r 178 RMGAEVFHTLKKELKSKGYSTNVGDEGGFSPNLKTADSALDLIANSIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGE 257 (424)
Q Consensus 178 ~~~~ev~~~lk~~L~~~g~~t~vgDEGGfap~~~~~eeaL~ll~eAi~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~ 257 (424)
..... ......+. ++.......++.++.+...-+. .|.++.|.+||-
T Consensus 172 --------~~~~~--~~k~~~~~----~~~~~~~~~~~die~v~avr~~----~g~d~~l~vDan--------------- 218 (404)
T 3ekg_A 172 --------KMGFI--GGKMPLHH----GPSEGEEGLKKNLEELATMRER----VGPDFWLMFDCW--------------- 218 (404)
T ss_dssp --------HTTCS--EEEEECCC----CGGGHHHHHHHHHHHHHHHHHH----HCSSSEEEEECT---------------
T ss_pred --------HHHHH--HHHHCCCC----CCCCCCCCHHHHHHHHHHHHHH----HCCCCCEEEECC---------------
T ss_conf --------87777--75302355----7644544599999999999997----299986797247---------------
Q ss_pred CCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCC
Q ss_conf 86568789999999876544869977676310423799886423883685043000021488852100386522342545
Q gi|254780670|r 258 NLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQLVGDDLFVTNPERLHKGINEEVANAILIKPN 337 (424)
Q Consensus 258 ~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~N 337 (424)
..++.++-+.+... +++|.+..+|+|+..+|+++..++.......+-|.++.- ..+..-+++.|+.++++-+-+|+.
T Consensus 219 -~~~~~~~Ai~~~~~-l~~~~l~wiEeP~~~~d~~~~~~lr~~~~~~ipIa~gE~-~~~~~~~~~~i~~~a~diiq~dv~ 295 (404)
T 3ekg_A 219 -MSLDLNYATRLARG-AREYGLKWIEEALPPDDYWGYAELRRNAPTGMMVTTGEH-EATRWGFRMLLEMGCCDIIQPDVG 295 (404)
T ss_dssp -TCCCHHHHHHHHHH-HGGGTCCEEECCSCTTCHHHHHHHHHHSCTTCEEEECTT-CCHHHHHHHHHHTTCCSEECCCTT
T ss_pred -CCCCHHHHHHHHHH-HHHCCCCEECCCCCCCCHHHHHHHHHHCCCCEEEECCCC-CCCHHHHHHHHHCCCCCEEEECCC
T ss_conf -67999999876630-100244113179883479999999972777805844776-688999999997599888983741
Q ss_pred CHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHH
Q ss_conf 3003899999999999879869995078887235899899981
Q gi|254780670|r 338 QIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVAT 380 (424)
Q Consensus 338 QiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~ 380 (424)
.+|-+|+++..+.+|+.+|..++ .|-++ ..-+|++.+.
T Consensus 296 ~~GGit~~~kia~lA~~~gi~v~-~H~~~----~~~~h~~aa~ 333 (404)
T 3ekg_A 296 WCGGVTELLKISALADAHNALVV-PHGSS----VYSYHFVATR 333 (404)
T ss_dssp TTTHHHHHHHHHHHHHHTTCEEC-CCCCT----HHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEE-ECCHH----HHHHHHHHHH
T ss_conf 03989999999999998699698-55529----9999999970
No 42
>2ppg_A Putative isomerase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.49A {Sinorhizobium meliloti 1021}
Probab=99.71 E-value=9.3e-14 Score=120.61 Aligned_cols=300 Identities=15% Similarity=0.189 Sum_probs=196.1
Q ss_pred CEEEEEEEEEEE-----------------ECCCC----------C----EEEEEEEECCCCEEEEECCCCCCCCCCEEEE
Q ss_conf 910589986886-----------------07978----------4----2999999848976766344786647754676
Q gi|254780670|r 1 MFINDIIAREVI-----------------DSRGS----------P----TIEVDVCLEDGSTGRAMVPSGASTGIHEAFE 49 (424)
Q Consensus 1 m~I~~i~~r~Il-----------------DSRG~----------P----TvEvev~~~~g~~gra~~PSGaStG~~Ea~e 49 (424)
++|++|..+.+- +++|. | ||=|+|+|++|.+|.+-+.+..+
T Consensus 5 ~kI~~ie~~~~~~Pl~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlV~i~td~G~~G~GE~~~~~~-------- 76 (399)
T 2ppg_A 5 DRVKKIESFTLTLPRETPYLGKPRPGEEPNGRGYLVRKANRTVYPTFDRSVLVRIETENGAVGWGETYGLVA-------- 76 (399)
T ss_dssp CCEEEEEEEEEEECCSSCTTSCCCTTCCCCTTSEEEEGGGTEEEESSEEEEEEEEEETTSCEEEEEEECSSC--------
T ss_pred CCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCC--------
T ss_conf 762089999985436877656566445555432100246752357678729999998999989985478877--------
Q ss_pred ECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHCCCCH
Q ss_conf 268986516804899999998756789759885578988864653036643-2212322220244899875266349848
Q gi|254780670|r 50 LRDQEKRYFGKGVLKAIAFVNDEIRTALLGCDARDQLLIDKIMIDLDGTPN-KSRLGANAILGVSLAVSKAAAQTSNLPL 128 (424)
Q Consensus 50 lrD~~~~~~G~gV~~Av~~in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~n-ks~lGaNailAvSlA~akA~A~~~~~pL 128 (424)
-....+.+++.++|.|+|+|+.+-..+-+.|..+-...+ ...+...++-|+-+|++-+.++..++||
T Consensus 77 ------------~~~~~~~i~~~l~p~liG~d~~~~~~~~~~l~~~~~~~~~~~g~~~~A~saiD~AlwDl~gK~~g~Pl 144 (399)
T 2ppg_A 77 ------------PRATMEIIDDLLADFTIGRDPFDAAAIHDDLYDLMRVRGYTGGFYVDALAAIDIALWDLAGKLAGLPV 144 (399)
T ss_dssp ------------HHHHHHHHHHTTHHHHTTCCGGGHHHHHHHHHHTTGGGTCCSHHHHHHHHHHHHHHHHHHHHHHTCBG
T ss_pred ------------HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCH
T ss_conf ------------79999999999899866998010999999999998761667642788999999999999998739975
Q ss_pred HHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 88225324564754300000366455677661025651488774899989999999999987520000136765576448
Q gi|254780670|r 129 YKYLGGCSAHILPVPLMNILNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYSTNVGDEGGFSP 208 (424)
Q Consensus 129 y~yl~~~~~~~lP~P~~NiinGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t~vgDEGGfap 208 (424)
|+.|++.....+|.... .+ ...+ .+.+. + ..+....+++..-.-. .|..+
T Consensus 145 ~~LLGg~~~~~i~~~~~-~~--------------------~~~~-~~~~~---~----~~~~~~~~g~~~~k~k-~~~~~ 194 (399)
T 2ppg_A 145 CKLLGGQRRDRIAAYIS-GL--------------------PEDT-RAKRA---E----LAAAWQAKGFSSFKFA-SPVAD 194 (399)
T ss_dssp GGTTTCCCCSEEEEEEE-CC--------------------CCSS-HHHHH---H----HHHHHHHTTCCEEEEE-GGGCT
T ss_pred HHHCCCCCCCCCCEEEE-CC--------------------CCCH-HHHHH---H----HHHHHHHCCCCCCCCC-CCCCC
T ss_conf 33349853211221341-26--------------------7762-89999---9----9999874386400234-56761
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCC
Q ss_conf 86846899999999997538531110234311046532027851111468656878999999987654486997767631
Q gi|254780670|r 209 NLKTADSALDLIANSIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSE 288 (424)
Q Consensus 209 ~~~~~eeaL~ll~eAi~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e 288 (424)
. ...+.+..+.++ .|.++.|.+|+ +.-.+.++-+.+... +++|.+..+|+|+..
T Consensus 195 ~--~d~~~~~~iR~~-------~g~~~~l~vDa----------------N~~~~~~~A~~~~~~-l~~~~l~~~EeP~~~ 248 (399)
T 2ppg_A 195 D--GVAKEMEILRER-------LGPAVRIACDM----------------HWAHTASEAVALIKA-MEPHGLWFAEAPVRT 248 (399)
T ss_dssp T--CHHHHHHHHHHH-------HCSSSEEEEEC----------------CSCCCHHHHHHHHHH-HGGGCCCEEESCSCT
T ss_pred H--HHHHHHHHHHHH-------HCCCCEEHHCC----------------CCCCCHHHHHHHHHH-HHHCCCEEEECCCCH
T ss_conf 7--789999999986-------38641271012----------------568999999999986-552295453235785
Q ss_pred CCHHHHHHHHHHCCCCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCC
Q ss_conf 04237998864238836850430000214888521003865223425453003899999999999879869995078887
Q gi|254780670|r 289 DDWHGWKILTNKIGSNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGET 368 (424)
Q Consensus 289 ~D~~gw~~l~~~~g~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGET 368 (424)
+|++++++|.++.+ +-|.+|.- ++++.-+.+.|+.++++-+.+|+.- |-+|+++..+.+|+.+|..+++ |...++
T Consensus 249 ~d~~~~~~L~~~~~--ipIa~gE~-~~~~~d~~~~i~~~a~di~~~d~~~-GGit~~~kia~~A~~~gi~~~~-h~~~~s 323 (399)
T 2ppg_A 249 EDIDGLARVAASVS--TAIAVGEE-WRTVHDMVPRVARRALAIVQPEMGH-KGITQFMRIGAYAHVHHIKVIP-HATIGA 323 (399)
T ss_dssp TCHHHHHHHHHHCS--SEEEECTT-CCSHHHHHHHHHTTCCSEECCBHHH-HHHHHHHHHHHHHHHTTCEECC-BCCSSC
T ss_pred HHHHHHHHHHHCCC--CCEEECCC-HHHHHHHHHHHHCCCCCEEEECCCC-CCCHHHHHHHHHHHHCCCEEEE-ECCCCC
T ss_conf 56677899875258--99894474-1536648999975888899835302-5854999999999987995997-278763
Q ss_pred CHHHHH--HHHHHHC
Q ss_conf 235899--8999819
Q gi|254780670|r 369 EDHTIA--DLAVATN 381 (424)
Q Consensus 369 eD~~ia--DLAVg~~ 381 (424)
.=.+-+ +++.++.
T Consensus 324 ~i~~aa~lhl~aa~~ 338 (399)
T 2ppg_A 324 GIFLAASLQASAALA 338 (399)
T ss_dssp SHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHCC
T ss_conf 999999999999687
No 43
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=99.71 E-value=3.7e-15 Score=131.01 Aligned_cols=315 Identities=19% Similarity=0.227 Sum_probs=198.9
Q ss_pred EEEEEEEEEEE---ECCCCCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 10589986886---079784299999984897676634478664775467626898651680489999999875678975
Q gi|254780670|r 2 FINDIIAREVI---DSRGSPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAFVNDEIRTALL 78 (424)
Q Consensus 2 ~I~~i~~r~Il---DSRG~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~in~~i~~~L~ 78 (424)
.|++|..--+- -+.++-+|=|+|+|++|.+|.+-+....+. ..+.+-.+.- ..+.+.++|.|+
T Consensus 6 ~i~~v~~~p~~~~~~~w~~~~vlV~i~td~G~~G~GE~~~~~~~--~~~~~~~~~~------------~~~~~~l~~~li 71 (394)
T 3mqt_A 6 NIVSVEFIPVNVAATNWSENTVIVKVTDENGVYGLGEADGPPEC--MKAFSEIENE------------HKWLNNIKEAVI 71 (394)
T ss_dssp CEEEEEEEEEECC-----CEEEEEEEEETTSCEEEEEECSCHHH--HHHHHTCCCC------------BTTBCCGGGGTT
T ss_pred EEEEEEEEEECCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCC--CHHHHHHHHH------------HHHHHHHHHHHC
T ss_conf 68999999863788875267799999989999899741388765--4026668999------------999999999877
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCCCCC
Q ss_conf 98855789888646530366432212322220244899875266349848882253245647543000003664556776
Q gi|254780670|r 79 GCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNILNGGIHADNAL 158 (424)
Q Consensus 79 g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~NiinGG~HA~~~l 158 (424)
|+|+.|...+-+.|....-......+...++-|+-+|++-+.++..++|||+.|+|.....+|. ...+.+..
T Consensus 72 G~dp~di~~i~~~l~~~~~~~~~~g~~~~a~said~AlwDl~gK~~g~pl~~LLGG~~~~~i~~--y~~~~~~~------ 143 (394)
T 3mqt_A 72 GRDPLEFRANYNRMYDTTKWIGMRGLGLFAISGIDMALYDLAGKQLGVPAYKLMGGAQKAQLTP--YFTLYPSV------ 143 (394)
T ss_dssp TSCTTCHHHHHHHHHHHTTTTCSSBHHHHHHHHHHHHHHHHHHHHHTCBHHHHTTCCCSSSBCC--EEECCCCC------
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCEE--EEEECCCC------
T ss_conf 9983489999999998503227764378999999999999999883998799819987775136--77632445------
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC---CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCH
Q ss_conf 6102565148877489998999999999998752000013---6765576448868468999999999975385311102
Q gi|254780670|r 159 DFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYST---NVGDEGGFSPNLKTADSALDLIANSIEKAGYNAGKDL 235 (424)
Q Consensus 159 ~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t---~vgDEGGfap~~~~~eeaL~ll~eAi~~aGy~~g~di 235 (424)
....+.... .+-+..+.+.+.++|+.+ .++... ..+..+-++.+.+.-+.. |.++
T Consensus 144 ---------~~~~~~~~~----~~~~~~~~~~~~~~Gf~~~K~k~~~~~-----~~~~~~~i~~v~~ir~~~----g~~~ 201 (394)
T 3mqt_A 144 ---------AADATLSEI----VEAYKPLIAKAKERGAKAVKVCIIPND-----KVSDKEIVAYLRELREVI----GWDM 201 (394)
T ss_dssp ---------CTTCCHHHH----HHHHHHHHHHHHHTTCSEEEEECCCCT-----TSCHHHHHHHHHHHHHHH----CSSS
T ss_pred ---------CCCCCHHHH----HHHHHHHHHHHHHCCCCCCCCCCCCCC-----CCCHHHHHHHHHHHHHHH----CCCC
T ss_conf ---------432105677----999999999999758761135666766-----536898999999999863----9875
Q ss_pred HHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCEEEC
Q ss_conf 34311046532027851111468656878999999987654486997767631042379988642388368504300002
Q gi|254780670|r 236 LIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQLVGDDLFVT 315 (424)
Q Consensus 236 ~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~IvGDDL~vT 315 (424)
.+.+|+.. ..+..+-...+.+.+++|++.++|+|+..+|+++++.+.++.. +-|.+|.- ++
T Consensus 202 ~l~~D~n~----------------~~~~~~aa~~~~~~l~~~~~~~~EeP~~~~d~~~~~~l~~~~~--~pIa~~E~-~~ 262 (394)
T 3mqt_A 202 DMMVDCLY----------------RWTDWQKARWTFRQLEDIDLYFIEACLQHDDLIGHQKLAAAIN--TRLCGAEM-ST 262 (394)
T ss_dssp EEEEECTT----------------CCSCHHHHHHHHHHTGGGCCSEEESCSCTTCHHHHHHHHHHSS--SEEEECTT-CC
T ss_pred CEEHHHHH----------------CCCHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHCCCCC--CCEEECCC-CC
T ss_conf 15311023----------------1461999999987540046378867886103688887501689--85341110-26
Q ss_pred CHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHH--HHHHHHHC
Q ss_conf 1488852100386522342545300389999999999987986999507888723589--98999819
Q gi|254780670|r 316 NPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTI--ADLAVATN 381 (424)
Q Consensus 316 n~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~i--aDLAVg~~ 381 (424)
+....++.++.++++.+.+|+..+|-+|++++.+++|+.+|..++ .|. .++.=.+. +||+.++.
T Consensus 263 ~~~~~~~~i~~~a~di~~~d~~~~GGit~~~~i~~~A~~~gi~v~-~h~-~~~~i~~aa~~hl~aa~~ 328 (394)
T 3mqt_A 263 TRFEAQEWLEKTGISVVQSDYNRCGGVTELLRIMDICEHHNAQLM-PHN-WKTGITAAAARHFGIVCH 328 (394)
T ss_dssp HHHHHHHHHHHHCCSEECCCTTTSSCHHHHHHHHHHHHHHTCEEC-CCC-CSCHHHHHHHHHHHHHCT
T ss_pred CCHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHCCCEEE-ECC-CCCHHHHHHHHHHHHHCC
T ss_conf 602579999965788785156507882589999999998698697-428-885799999999999767
No 44
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=99.70 E-value=8.8e-14 Score=120.79 Aligned_cols=300 Identities=15% Similarity=0.124 Sum_probs=200.4
Q ss_pred CEEEEEEEEEEE----------ECCCCCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHH
Q ss_conf 910589986886----------0797842999999848976766344786647754676268986516804899999998
Q gi|254780670|r 1 MFINDIIAREVI----------DSRGSPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAFVN 70 (424)
Q Consensus 1 m~I~~i~~r~Il----------DSRG~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~in 70 (424)
|.|.+|+..+++ -+..++-|=|+|++++|..|.+-+++.. +...++..+-
T Consensus 8 ~~~~ki~~i~~~~~~~~~~~~~~~~~r~~vlVrv~t~~G~~G~GE~~~~~--------------------~~~~~~~~~~ 67 (391)
T 2qgy_A 8 ISIGKLSRLKIWITDNHLSDDQWSNTKKFIIIKITTEDGIEGWGEAFSIN--------------------FREKGIAIII 67 (391)
T ss_dssp CCCCCEEEEEEEEECCCBCGGGCSBCCCCEEEEEEETTCCEEEEEECCCT--------------------TTHHHHHHHH
T ss_pred CCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCC--------------------CCHHHHHHHH
T ss_conf 64035517899976886688885278629999999899998998612887--------------------6479999999
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEECCC
Q ss_conf 75678975988557898886465303664322123222202448998752663498488822532456475430000036
Q gi|254780670|r 71 DEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNILNG 150 (424)
Q Consensus 71 ~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~NiinG 150 (424)
+.+.|.|+|+++.+...+-+.|..+... ........|+-|+.+|++-+.++..++|||+.|++.....+|+- ...++
T Consensus 68 ~~l~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~A~said~AlwDl~gK~~~~Pl~~LLgg~~~~~i~~~--~~~~~ 144 (391)
T 2qgy_A 68 KELFREISNIPNLSIKSFYNKISLLSDG-HRGLDFSSATSAIEIALWDISGKLKNLPLNSLLTKSPKPNVPIY--ATCWS 144 (391)
T ss_dssp HHHHHHHTTCTTCCHHHHHHHHHHHHTT-CCCHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHCSSCCSEEEEE--EECCC
T ss_pred HHHHHHHCCCCCCCHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCE--EECCC
T ss_conf 9999986799834799999999976413-78751789999999999999626035630100688655653311--22145
Q ss_pred CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 64556776610256514887748999899999999999875200001---367655764488684689999999999753
Q gi|254780670|r 151 GIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYS---TNVGDEGGFSPNLKTADSALDLIANSIEKA 227 (424)
Q Consensus 151 G~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~---t~vgDEGGfap~~~~~eeaL~ll~eAi~~a 227 (424)
+ ...+..+.++.+ ++.+ ++|+. ..+|. ++.++-++.+...-+.
T Consensus 145 ~-----------------~~~~~~~~~~~~-------~~~~-~~g~~~~K~k~g~--------~~~~~di~~v~~vr~~- 190 (391)
T 2qgy_A 145 D-----------------LKKDTNDYLRQI-------EKFY-GKKYGGIKIYPML--------DSLSISIQFVEKVREI- 190 (391)
T ss_dssp S-----------------SCCCHHHHHHHH-------HHHH-HTTCSCEEECCCC--------SSHHHHHHHHHHHHHH-
T ss_pred C-----------------CCCCHHHHHHHH-------HHHH-HCCCCCCCCCCCC--------CCHHHHHHHHHHHHHH-
T ss_conf 5-----------------556789999999-------9865-3002541023446--------4367899999999986-
Q ss_pred CCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEEE
Q ss_conf 85311102343110465320278511114686568789999999876544869977676310423799886423883685
Q gi|254780670|r 228 GYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQL 307 (424)
Q Consensus 228 Gy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~I 307 (424)
.|.++.+.+|+ + .-.+.++-+++.. .+++|++.++|+|+..+|+++.+++..+.+ +-|
T Consensus 191 ---~g~~~~l~vDa-------N---------~~~~~~~A~~~~~-~l~~~~l~wiEeP~~~~d~~~~~~l~~~~~--ipI 248 (391)
T 2qgy_A 191 ---VGDELPLMLDL-------A---------VPEDLDQTKSFLK-EVSSFNPYWIEEPVDGENISLLTEIKNTFN--MKV 248 (391)
T ss_dssp ---HCSSSCEEEEC-------C---------CCSCHHHHHHHHH-HHGGGCCSEEECSSCTTCHHHHHHHHHHCS--SCE
T ss_pred ---CCCCCEEECCC-------C---------CCCCHHHHHHHHH-HHHCCCCEEECCCCCCCCHHHCHHHCCCCC--CCE
T ss_conf ---37630000132-------2---------3568999999998-742268613317877015010100000469--973
Q ss_pred ECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHH--HHHHHHC
Q ss_conf 0430000214888521003865223425453003899999999999879869995078887235899--8999819
Q gi|254780670|r 308 VGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIA--DLAVATN 381 (424)
Q Consensus 308 vGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~ia--DLAVg~~ 381 (424)
.+|.- ++.+.-+++.++.++++.+-+|+.-+|-+|++++.+++|+++|+.+++ |..+|+.=.+.+ +|+.++.
T Consensus 249 a~gE~-~~~~~~~~~~i~~~a~dii~~d~~~~GGit~~~~i~~~A~~~gi~~~~-h~~~~~~i~~aa~lhl~aa~p 322 (391)
T 2qgy_A 249 VTGEK-QSGLVHFRELISRNAADIFNPDISGMGGLIDIIEISNEASNNGIFISP-HCWNSMSVSASAMLHVCSSIP 322 (391)
T ss_dssp EECTT-CCSHHHHHHHHHTTCCSEECCBTTTSSCHHHHHHHHHHHHHTTCEECC-BCCSCTTHHHHHHHHHHHHCT
T ss_pred ECCCC-CEEHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEE-ECCCCCHHHHHHHHHHHHHCC
T ss_conf 56840-000000566764376788983687079825999999999986986998-789863899999999998589
No 45
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=99.70 E-value=6.4e-14 Score=121.83 Aligned_cols=295 Identities=22% Similarity=0.291 Sum_probs=202.9
Q ss_pred CEEEEEEEEEE--------EECCC----CCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHH
Q ss_conf 91058998688--------60797----8429999998489767663447866477546762689865168048999999
Q gi|254780670|r 1 MFINDIIAREV--------IDSRG----SPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAF 68 (424)
Q Consensus 1 m~I~~i~~r~I--------lDSRG----~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~ 68 (424)
++|++|..+.| -.|+| ++.+-|+|.+++|..|.+-++..- .|.|.........
T Consensus 5 ~~I~~i~~~~~~lPl~~P~~~s~~~~~~~~~~iV~i~t~~G~~G~GE~~~~~---------------~~~~e~~~~~~~~ 69 (365)
T 3ik4_A 5 TTIQAISAEAINLPLTEPFAIASGAQAVAANVLVKVQLADGTLGLGEAAPFP---------------AVSGETQTGTSAA 69 (365)
T ss_dssp TBEEEEEEEEEEEEBSCC--------CEEEEEEEEEEETTSCEEEEEECCCC---------------TTTCCCHHHHHHH
T ss_pred CEEEEEEEEEEEECCCCCEECCCEEEEEEEEEEEEEEECCCCEEEEEEECCC---------------CCCCCCHHHHHHH
T ss_conf 7687999999991568857887879999899999999899999999730878---------------8786569999999
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEEC
Q ss_conf 98756789759885578988864653036643221232222024489987526634984888225324564754300000
Q gi|254780670|r 69 VNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNIL 148 (424)
Q Consensus 69 in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~Nii 148 (424)
+ +.+.|.|+|+++.+...+-..|-..... ..-+.-|+.+|++-+.++..++|||+++++... ++|....+
T Consensus 70 ~-~~l~~~l~g~d~~~~~~~~~~~~~~~~~------~~~a~~aid~AlwDl~~k~~~~pl~~llG~~~~---~i~~~~~~ 139 (365)
T 3ik4_A 70 I-ERLQSHLLGADVRGWRKLAAMLDHAEHE------AAAARCGLEMAMLDALTRHYHMPLHVFFGGVSK---QLETDMTI 139 (365)
T ss_dssp H-HHHGGGTTTCBGGGHHHHHHHHHHHCTT------CHHHHHHHHHHHHHHHHHHTTCBHHHHTTCSCS---EEEBCEEE
T ss_pred H-HHHHHHHHCCCHHHHHHHHHHHHHHCCC------HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC---EEEEEECC
T ss_conf 9-9999987376401389988766431131------699999999999999761349986223467641---25665224
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC---CCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 36645567766102565148877489998999999999998752000013---676557644886846899999999997
Q gi|254780670|r 149 NGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYST---NVGDEGGFSPNLKTADSALDLIANSIE 225 (424)
Q Consensus 149 nGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t---~vgDEGGfap~~~~~eeaL~ll~eAi~ 225 (424)
+.+ +-.+. ...+++.+ ++|+.+ .+| + .+.++.++.+ +++.
T Consensus 140 ~~~--------------------~~~~~-------~~~~~~~~-~~Gf~~~KiKvg---~-----~~~~~d~~~i-~~ir 182 (365)
T 3ik4_A 140 TAG--------------------DEVHA-------AASAKAIL-ARGIKSIKVKTA---G-----VDVAYDLARL-RAIH 182 (365)
T ss_dssp CCS--------------------CHHHH-------HHHHHHHH-HTTCCCEEEECC---S-----SCHHHHHHHH-HHHH
T ss_pred CCC--------------------CHHHH-------HHHHHHHH-HCCCCCCCCCCC---C-----CCHHHHHHHH-HHHH
T ss_conf 589--------------------98999-------99999997-468630146778---8-----9989999999-9999
Q ss_pred HCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHH-HHHCCEEEEECCCCCCCHHHHHHHHHHCCCC
Q ss_conf 538531110234311046532027851111468656878999999987-6544869977676310423799886423883
Q gi|254780670|r 226 KAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANL-VDQYPIYSIEDGMSEDDWHGWKILTNKIGSN 304 (424)
Q Consensus 226 ~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l-~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~ 304 (424)
++| .++.|.+|+ +.-++.++-+++...+ .++|++.++|+|+..+|++++.+|.+..+
T Consensus 183 ~~~----~~~~l~vDa----------------N~~~~~~~A~~~~~~~~~~~~~l~~~EeP~~~~d~~~~~~l~~~~~-- 240 (365)
T 3ik4_A 183 QAA----PTAPLIVDG----------------NCGYDVERALAFCAACKAESIPMVLFEQPLPREDWAGMAQVTAQSG-- 240 (365)
T ss_dssp HHS----SSCCEEEEC----------------TTCCCHHHHHHHHHHHHHTTCCEEEEECCSCTTCHHHHHHHHHHSS--
T ss_pred HHH----HCCEEEEEC----------------CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCC--
T ss_conf 875----011078736----------------7677899999998765540366434367887213788999984279--
Q ss_pred EEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCC-CHHHHHHHHHHHC
Q ss_conf 6850430000214888521003865223425453003899999999999879869995078887-2358998999819
Q gi|254780670|r 305 CQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGET-EDHTIADLAVATN 381 (424)
Q Consensus 305 ~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGET-eD~~iaDLAVg~~ 381 (424)
+-|..|.- +.+...++..++.++++.+.+|+.. |-++++++.+++|+.+|..+++++..+-. .-...++||.+..
T Consensus 241 ipIa~dE~-~~~~~~~~~~i~~~~~d~v~~k~~~-gG~~~~~~~~~~a~~~gi~~~~~~~~~s~ig~~a~~hlaa~~~ 316 (365)
T 3ik4_A 241 FAVAADES-ARSAHDVLRIAREGTASVINIKLMK-AGVAEGLKMIAIAQAAGLGLMIGGMVESILAMSFSANLAAGNG 316 (365)
T ss_dssp SCEEESTT-CSSHHHHHHHHHHTCCSEEEECHHH-HCHHHHHHHHHHHHHHTCEEEECCSSCCHHHHHHHHHHHHHHC
T ss_pred CCCCCCCC-CCCHHHHHHHHHCCCCCEEEECCCC-CCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCC
T ss_conf 88307847-7899999999985998689978654-5548999999999984996897897322999999999998389
No 46
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=99.70 E-value=2.9e-14 Score=124.41 Aligned_cols=299 Identities=20% Similarity=0.234 Sum_probs=204.5
Q ss_pred CEEEEEEEEE--------EEECCCC----CEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHH
Q ss_conf 9105899868--------8607978----429999998489767663447866477546762689865168048999999
Q gi|254780670|r 1 MFINDIIARE--------VIDSRGS----PTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAF 68 (424)
Q Consensus 1 m~I~~i~~r~--------IlDSRG~----PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~ 68 (424)
|+|++|..+. +-.|+|. ++|-|+|++++|..|.+-+.... .|.+.....+...
T Consensus 1 MkI~~i~~~~~~~pl~~p~~~s~~~~~~~~~vlv~l~~~~G~~G~GE~~~~~---------------~~~~e~~~~~~~~ 65 (369)
T 2p8b_A 1 MKITAIHLYAIRLPLRNPFVISYGSYSDMPSIIVKMETDEGIIGYGEGVADD---------------HVTGESWESTFHT 65 (369)
T ss_dssp CCEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCEEEEEECCCH---------------HHHSCCHHHHHHH
T ss_pred CEEEEEEEEEEEECCCCCEECCCEEEEEEEEEEEEEEECCCCEEEEEECCCC---------------CCCCCCHHHHHHH
T ss_conf 9856999999970467877766768988899999999899988998654886---------------6664369999999
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEEC
Q ss_conf 98756789759885578988864653036643221232222024489987526634984888225324564754300000
Q gi|254780670|r 69 VNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNIL 148 (424)
Q Consensus 69 in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~Nii 148 (424)
+...+.|.|+|+++.+...+-..+...-. -...+.-|+.+|++-+.++..++|||+.|++.....+|+-. .+
T Consensus 66 ~~~~l~~~l~g~~~~~~~~~~~~~~~~~~------~~~~a~said~AlwDl~~K~~~~pl~~llg~~~~~~~~~~~--~~ 137 (369)
T 2p8b_A 66 LKHTLTPALIGQNPMNIEKIHDMMDNTIY------GVPTAKAAIDIACFDIMGKKLNQPVYQLIGGRYHEEFPVTH--VL 137 (369)
T ss_dssp HHHTHHHHHTTCCTTCHHHHHHHHHHHCS------CCHHHHHHHHHHHHHHHHHHTTSBGGGGTTCCCCSCEECCE--EE
T ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHCCCC------CHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCEE--CC
T ss_conf 99987798749982158999987640135------27899999999999985260257511113898764544100--23
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 3664556776610256514887748999899999999999875200001---3676557644886846899999999997
Q gi|254780670|r 149 NGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYS---TNVGDEGGFSPNLKTADSALDLIANSIE 225 (424)
Q Consensus 149 nGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~---t~vgDEGGfap~~~~~eeaL~ll~eAi~ 225 (424)
...+-.+..+.. ++.. ++|+. ..+|. +.++-++.+....+
T Consensus 138 --------------------~~~~~~~~~~~~-------~~~~-~~G~~~iKiKvg~---------~~~~d~~~i~~ir~ 180 (369)
T 2p8b_A 138 --------------------SIADPENMAEEA-------ASMI-QKGYQSFKMKVGT---------NVKEDVKRIEAVRE 180 (369)
T ss_dssp --------------------CSCCHHHHHHHH-------HHHH-HTTCCEEEEECCS---------CHHHHHHHHHHHHH
T ss_pred --------------------CCCCHHHHHHHH-------HHHH-HCCCCEEEEECCC---------CHHHHHHHHHHHHH
T ss_conf --------------------457769999999-------9998-7699689996599---------98999999999999
Q ss_pred HCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCE
Q ss_conf 53853111023431104653202785111146865687899999998765448699776763104237998864238836
Q gi|254780670|r 226 KAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNC 305 (424)
Q Consensus 226 ~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~ 305 (424)
.. |.++.|.+|+... ..+.++-+.+ .+.+++|++.++|+|+..+|+++...|.+..+ +
T Consensus 181 ~~----g~~~~l~~D~n~~---------------~~~~~~a~~~-~~~l~~~~~~~iEeP~~~~d~~~~~~l~~~~~--i 238 (369)
T 2p8b_A 181 RV----GNDIAIRVDVNQG---------------WKNSANTLTA-LRSLGHLNIDWIEQPVIADDIDAMAHIRSKTD--L 238 (369)
T ss_dssp HH----CTTSEEEEECTTT---------------TBSHHHHHHH-HHTSTTSCCSCEECCBCTTCHHHHHHHHHTCC--S
T ss_pred HH----CCCCEEEEECCCC---------------CCCHHHHHHH-HHHHHCCCCEEEECCCCCCCHHHHHHHHHCCC--C
T ss_conf 72----9886698752546---------------7769999999-87520247602432638668999999875368--7
Q ss_pred EEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCC
Q ss_conf 850430000214888521003865223425453003899999999999879869995078887235899899981998
Q gi|254780670|r 306 QLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVATNCG 383 (424)
Q Consensus 306 ~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~~a~ 383 (424)
.|.+|.- ++...-+++.++.++++.+.+|+..+|-+|++++.+.+|+++|+.+++++- -|+.=..-+.+.++...+
T Consensus 239 pia~~E~-~~~~~~~~~~i~~~~~di~~~d~~~~GGit~~~~i~~~a~~~gi~~~~~~~-~~~~i~~~a~~h~a~~~~ 314 (369)
T 2p8b_A 239 PLMIDEG-LKSSREMRQIIKLEAADKVNIKLMKCGGIYPAVKLAHQAEMAGIECQVGSM-VESSVASSAGFHVAFSKK 314 (369)
T ss_dssp CEEESTT-CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCS-SCCHHHHHHHHHHHTTCT
T ss_pred CCCCCCC-EEEHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEECCC-CCCHHHHHHHHHHHHHCC
T ss_conf 6104674-130354999986489886886344177788999999999986993898896-404899999999997276
No 47
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=99.69 E-value=1.3e-15 Score=134.41 Aligned_cols=318 Identities=18% Similarity=0.182 Sum_probs=201.0
Q ss_pred EEEEEEEEE---EEECCCCCEEEEEEEECCCCEEEEECCCC-CCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 105899868---86079784299999984897676634478-66477546762689865168048999999987567897
Q gi|254780670|r 2 FINDIIARE---VIDSRGSPTIEVDVCLEDGSTGRAMVPSG-ASTGIHEAFELRDQEKRYFGKGVLKAIAFVNDEIRTAL 77 (424)
Q Consensus 2 ~I~~i~~r~---IlDSRG~PTvEvev~~~~g~~gra~~PSG-aStG~~Ea~elrD~~~~~~G~gV~~Av~~in~~i~~~L 77 (424)
.|++|..-. -.......+|=|+|++++|.+|.+-++.. .....++.++ .-.+ +.+.+.|.|
T Consensus 11 ~i~~i~~~~~~~~~~~~~~~~vlV~i~t~~G~~G~GE~~~~~~~~~~~~~~~---~~~~------------~~~~l~~~l 75 (394)
T 3mkc_A 11 PIKSIEFIPVNYQASNWSQNTVVVKVTDENGVYGLGEADGSPDAILAYANIE---TEHK------------WLTNITEKA 75 (394)
T ss_dssp CEEEEEEEEEEEC----CEEEEEEEEEETTSCEEEEEECSCHHHHHHHHTCC---CCBT------------TBCCTTTTT
T ss_pred CCCEEEEEEECCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCEEECCHH---HHHH------------HHHHHHHHH
T ss_conf 8306889981688888876779999998999989975048887621300099---9999------------999999985
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCCCC
Q ss_conf 59885578988864653036643221232222024489987526634984888225324564754300000366455677
Q gi|254780670|r 78 LGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNILNGGIHADNA 157 (424)
Q Consensus 78 ~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~NiinGG~HA~~~ 157 (424)
+|+++.+...+-+.|...........+...++.|+.+|++-+.++..++|||++|++.... .+|...-++++....
T Consensus 76 iG~~~~~i~~~~~~l~~~~~~~~~~g~~~~a~said~AlwDl~gK~~g~Pl~~LLgg~~r~--~i~~y~s~~~~~~~~-- 151 (394)
T 3mkc_A 76 IGRLPIEINAIWDAMYDATQWQGMRGLGMFALSGIDMALYDLAGKQLGVPAYQLLGGTNKD--KVHPYLTLYPAIPVD-- 151 (394)
T ss_dssp TTSCTTCHHHHHHHHHHHTHHHHSSTHHHHHHHHHHHHHHHHHHHHHTCBHHHHTTCCSCS--EECCEEECCCSCC-C--
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC--CCCEEEEEECCCCHH--
T ss_conf 6998136999999999731002775358899999999999999877099888855886677--761489974267403--
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC---CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 66102565148877489998999999999998752000013---676557644886846899999999997538531110
Q gi|254780670|r 158 LDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYST---NVGDEGGFSPNLKTADSALDLIANSIEKAGYNAGKD 234 (424)
Q Consensus 158 l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t---~vgDEGGfap~~~~~eeaL~ll~eAi~~aGy~~g~d 234 (424)
.. +....+-+..+.+..+..++.. ...-.+ .. +.++.++.+.+.-+.. |.+
T Consensus 152 -------------~~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~-~~~~~~~~v~~ir~~~----g~~ 205 (394)
T 3mkc_A 152 -------------AS----LDVAIKGYAPLLEKAKAHNIRAVKVCVPIKA----DW-STKEVAYYLRELRGIL----GHD 205 (394)
T ss_dssp -------------CC----HHHHHHHHHHHHHHHHHTTCSEEEEECCTTC----CC-CHHHHHHHHHHHHHHH----CSS
T ss_pred -------------HH----HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC----CC-CHHHHHHHHHHHHHHH----CCC
T ss_conf -------------44----5666655799999976517253324577667----75-6789999999999872----986
Q ss_pred HHHHHCHHHHHHCCCCCEEECCCCCCCC-HHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCEE
Q ss_conf 2343110465320278511114686568-789999999876544869977676310423799886423883685043000
Q gi|254780670|r 235 LLIALDCAASAFFKKEKYILKGENLELQ-PNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQLVGDDLF 313 (424)
Q Consensus 235 i~i~lD~AAsefy~~~kY~~~~~~~~~t-~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~IvGDDL~ 313 (424)
+.+.+|+. + .++ .++-+.+. +.+++|++.++|+|+..+|++++.++..+.+ +.|.+|.-
T Consensus 206 ~~l~vDaN-------~---------~~~~~~~a~~~~-~~l~~~~~~~~EeP~~~~~~~~~~~l~~~~~--ipIa~~E~- 265 (394)
T 3mkc_A 206 TDMMVDYL-------Y---------RFTDWYEVARLL-NSIEDLELYFAEATLQHDDLSGHAKLVENTR--SRICGAEM- 265 (394)
T ss_dssp SEEEEECT-------T---------CCCCHHHHHHHH-HHTGGGCCSEEESCSCTTCHHHHHHHHHHCS--SCBEECTT-
T ss_pred CCCHHHHH-------C---------CCCCHHHHHHHH-HHHHCCCCCCCCCCCCCCCHHHHHHHHCCCC--CCEEEEHH-
T ss_conf 13101322-------1---------665322322455-5553027764257766579899987633689--86784023-
Q ss_pred ECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHH--HHHHHHHCC-CHHE
Q ss_conf 021488852100386522342545300389999999999987986999507888723589--989998199-8010
Q gi|254780670|r 314 VTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTI--ADLAVATNC-GQIK 386 (424)
Q Consensus 314 vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~i--aDLAVg~~a-~~iK 386 (424)
.+.+..+++.++.++++.+.+|++.+|-++++++.+++|+.+|..++ .|-. ++.=.+. .|||.+++. .++-
T Consensus 266 ~~~~~~~~~~i~~~~~di~~~d~~~~GGi~~~~~ia~~a~~~gi~v~-~h~~-~~~i~~~a~~hlaaa~~~~~~~e 339 (394)
T 3mkc_A 266 STTRFEAEEWITKGKVHLLQSDYNRCGGLTELRRITEMATANNVQVM-PHNW-KTGITSAAAIHYQFAVGNAPYFE 339 (394)
T ss_dssp CCHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCEEC-CCCC-SCHHHHHHHHHHHHHTCCSSCCE
T ss_pred HHHHHHHHHHHHHCCHHHEEECCCCCCCHHHHHHHHHHHHHCCCEEE-ECCC-CCHHHHHHHHHHHHHCCCCCEEE
T ss_conf 32246778888717401143155426978999999999998799797-5799-96799999999999688987267
No 48
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=99.69 E-value=3e-14 Score=124.26 Aligned_cols=314 Identities=15% Similarity=0.201 Sum_probs=201.7
Q ss_pred EEEEEEEEEEEECCCCCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 10589986886079784299999984897676634478664775467626898651680489999999875678975988
Q gi|254780670|r 2 FINDIIAREVIDSRGSPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAFVNDEIRTALLGCD 81 (424)
Q Consensus 2 ~I~~i~~r~IlDSRG~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~in~~i~~~L~g~~ 81 (424)
.|+.|....+--. .|+|-|+|.++ |.+|.+-+.++ .+. ..+..+-+.++|.|+|+|
T Consensus 7 ~i~~i~~~~~r~~--~~~vlVrv~~d-g~~G~GE~~~~----~~~-----------------~~~~~i~~~l~~~LiG~d 62 (410)
T 2qq6_A 7 RITRVETAAIRAV--GPSVLVRVWAG-DEHGLGECYPS----APA-----------------AGIHHIVMNMEEQLLGED 62 (410)
T ss_dssp CCCEEEEEEECCC---CEEEEEEEET-TEEEEEEECCC----SCH-----------------HHHHHHHHTTHHHHTTCC
T ss_pred EEEEEEEEEECCC--CCCEEEEEEEC-CCEEEEECCCC----CCH-----------------HHHHHHHHHHHHHHCCCC
T ss_conf 7988878876577--98289999958-95899851288----549-----------------999999999999876998
Q ss_pred HHHHHHHHHHHHHCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCC
Q ss_conf 5578988864653036-643221232222024489987526634984888225324564754300000366455677661
Q gi|254780670|r 82 ARDQLLIDKIMIDLDG-TPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNILNGGIHADNALDF 160 (424)
Q Consensus 82 ~~dQ~~iD~~Li~lDg-T~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~NiinGG~HA~~~l~i 160 (424)
+.+.+.+-+.|..... ......+...|+.|+.+|++-+.++..++|||+.|++.....+|+ ..-++++ ..+.
T Consensus 63 ~~~~e~l~~~~~~~~~~~~~~~~~~~~A~said~AlwDl~gK~~g~Pl~~LLGg~~~~~ip~--yas~~~~-----~~~~ 135 (410)
T 2qq6_A 63 PRDVERLYEKMRRWNIFTGGQAGAVITALSGIETALWDLAGKLQGVPVYRLLGGAFRRRVRL--YADCNAG-----TVDA 135 (410)
T ss_dssp TTCHHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHTSCGGGGTTCCSCSEEEE--EEECCCS-----EECT
T ss_pred CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEE--EEECCCC-----CHHH
T ss_conf 22399999999973121356631889999999999999999984998888726545573457--7752778-----7666
Q ss_pred -EEEEEE-CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCCCC-----CC---CCHHHHHHHHHHHHHHC
Q ss_conf -025651-4887748999899999999999875200001---36765576448-----86---84689999999999753
Q gi|254780670|r 161 -QEFMIM-PVGAENIREAIRMGAEVFHTLKKELKSKGYS---TNVGDEGGFSP-----NL---KTADSALDLIANSIEKA 227 (424)
Q Consensus 161 -QEfmIi-P~g~~sf~eal~~~~ev~~~lk~~L~~~g~~---t~vgDEGGfap-----~~---~~~eeaL~ll~eAi~~a 227 (424)
.+.... .....+-.+-+ ...++ +.++|+. ..+|+.+++.. .. .+.++.++.+...-+.
T Consensus 136 ~~~~~~~~~~~~~s~e~~~-------~~a~~-~~~~Gf~~~Kikvg~~~~~~~~~~~~~~~~~~d~~~di~~v~avr~~- 206 (410)
T 2qq6_A 136 AAHHIEGGLFEEGSNEEYI-------AVARE-AVERGFDAIKLDVDDITGPLHRDFWNGAISPREHEAMVARVAAVREA- 206 (410)
T ss_dssp TCCEEECCTTCSTHHHHHH-------HHHHH-HHHTTCSEEEEECCCSSSTTCSCSSSCCCCHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHCCCCCCCCHHHHH-------HHHHH-HHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH-
T ss_conf 6654320444458999999-------99999-99779988997136767753333335677836589999999999997-
Q ss_pred CCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEEE
Q ss_conf 85311102343110465320278511114686568789999999876544869977676310423799886423883685
Q gi|254780670|r 228 GYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQL 307 (424)
Q Consensus 228 Gy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~I 307 (424)
.|.++.|.+|+ +..++.++-+.+... +++|.+..+|+|+..+|+++..++....+ +-|
T Consensus 207 ---~G~~~~l~vDa----------------N~~~~~~~Ai~~~~~-l~~~~i~~~EeP~~~~d~~~~~~l~~~~~--ipI 264 (410)
T 2qq6_A 207 ---VGPEVEVAIDM----------------HGRFDIPSSIRFARA-MEPFGLLWLEEPTPPENLDALAEVRRSTS--TPI 264 (410)
T ss_dssp ---HCSSSEEEEEC----------------TTCCCHHHHHHHHHH-HGGGCCSEEECCSCTTCHHHHHHHHTTCS--SCE
T ss_pred ---HCCCCEEECCC----------------CCCCCHHHHHHHHHH-HCCCCCCEEECCCCCCCHHHHHHHHHCCC--CCE
T ss_conf ---39854264266----------------667898999999998-51003335756888537888999987146--755
Q ss_pred ECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHH--HHHHHH
Q ss_conf 0430000214888521003865223425453003899999999999879869995078887235899--899981
Q gi|254780670|r 308 VGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIA--DLAVAT 380 (424)
Q Consensus 308 vGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~ia--DLAVg~ 380 (424)
.+|. .+.++..+++.+..++++.+.+|+..+|.+|++++.+.+|+.+|..+ +.|.. ++.=.+.+ ||+.++
T Consensus 265 a~gE-~~~~~~~~~~~i~~~~~d~~~~d~~~~GGit~~~~i~~lA~~~gi~v-~~h~~-~s~i~~aa~~hl~aa~ 336 (410)
T 2qq6_A 265 CAGE-NVYTRFDFRELFAKRAVDYVMPDVAKCGGLAEAKRIANLAELDYIPF-APHNV-SSPVGTVAAAHVCAAV 336 (410)
T ss_dssp EECT-TCCSHHHHHHHHHTTCCSEECCBHHHHTHHHHHHHHHHHHHTTTCCB-CCBCC-SCHHHHHHHHHHHHSC
T ss_pred ECCC-CCCCHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCEE-EEECC-CCHHHHHHHHHHHHHC
T ss_conf 4685-44788897777645886489965631686089999999999789709-96379-7389999999999977
No 49
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=99.69 E-value=7.2e-14 Score=121.46 Aligned_cols=294 Identities=19% Similarity=0.231 Sum_probs=197.2
Q ss_pred CEEEEEEEEEE--------EECCC----CCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHH
Q ss_conf 91058998688--------60797----8429999998489767663447866477546762689865168048999999
Q gi|254780670|r 1 MFINDIIAREV--------IDSRG----SPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAF 68 (424)
Q Consensus 1 m~I~~i~~r~I--------lDSRG----~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~ 68 (424)
|+|++|..+.+ -.|+| +.+|-|+|.+++| .|.+-+.+-.. +.|.+.....+...
T Consensus 1 MKI~~i~~~~~~~Pl~~p~~~s~g~~~~~~~v~V~i~~~~g-~G~GE~~~~~~-------------~~~~~~~~~~~~~~ 66 (368)
T 1sjd_A 1 MKLSGVELRRVQMPLVAPFRTSFGTQSVRELLLLRAVTPAG-EGWGECVTMAG-------------PLYSSEYNDGAEHV 66 (368)
T ss_dssp CCCCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEECSSC-EEEEECCCBSS-------------SSSSSCBHHHHHHH
T ss_pred CEEEEEEEEEEEECCCCCEECCCEEEEEEEEEEEEEEECCC-EEEEEEECCCC-------------CCCCCCCHHHHHHH
T ss_conf 98709999999822568867777589998999999997992-89998506788-------------75373419999999
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEEC
Q ss_conf 98756789759885578988864653036643221232222024489987526634984888225324564754300000
Q gi|254780670|r 69 VNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNIL 148 (424)
Q Consensus 69 in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~Nii 148 (424)
+...+.+.+++.++.+...+...+-.+.+ ..-+..|+.+|++-+.++..++|||++|++.. ..+|+. ..+
T Consensus 67 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~a~~aid~Al~Dl~~k~~~~pl~~llG~~~-~~i~~~--~~~ 136 (368)
T 1sjd_A 67 LRHYLIPALLAAEDITAAKVTPLLAKFKG-------HRMAKGALEMAVLDAELRAHERSFAAELGSVR-DSVPCG--VSV 136 (368)
T ss_dssp HHHTHHHHHHHSSSCCHHHHHHHHTTSCS-------CHHHHHHHHHHHHHHHHHHTTCBHHHHHTCCC-SEEEBE--EEE
T ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHHCCC-------CHHHHHHHHHHHHHHHHCCCCCCEEECCCCCC-CCEEEE--EEC
T ss_conf 99864055327983357887655331255-------57999999998876752413673156279975-643577--740
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 36645567766102565148877489998999999999998752000013-67655764488684689999999999753
Q gi|254780670|r 149 NGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYST-NVGDEGGFSPNLKTADSALDLIANSIEKA 227 (424)
Q Consensus 149 nGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t-~vgDEGGfap~~~~~eeaL~ll~eAi~~a 227 (424)
.-+ .+..+..+. +++.. .+|+.+ .+.- .|.. ..+.+..+.+++
T Consensus 137 ~~~-------------------~~~~~~~~~-------~~~~~-~~gf~~~K~k~----~~~~--d~~~i~~ir~~~--- 180 (368)
T 1sjd_A 137 GIM-------------------DTIPQLLDV-------VGGYL-DEGYVRIKLKI----EPGW--DVEPVRAVRERF--- 180 (368)
T ss_dssp CCC-------------------SCHHHHHHH-------HHHHH-HHTCSEEEEEC----BTTB--SHHHHHHHHHHH---
T ss_pred CCC-------------------CCHHHHHHH-------HHHHH-HCCCCEECCCC----CCHH--HHHHHHHHHHHC---
T ss_conf 468-------------------999999999-------99998-67983631578----8566--899999999862---
Q ss_pred CCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEEE
Q ss_conf 85311102343110465320278511114686568789999999876544869977676310423799886423883685
Q gi|254780670|r 228 GYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQL 307 (424)
Q Consensus 228 Gy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~I 307 (424)
|.++.|.+|+ ++. .+.++-+.+ .+| .+|.|.++|+|+..+|+++..++.++.+ +-|
T Consensus 181 ----g~~~~l~vDa-------N~~---------~~~~~a~~~-~~l-~~~~i~~iEeP~~~~~~~~~~~l~~~~~--ipi 236 (368)
T 1sjd_A 181 ----GDDVLLQVDA-------NTA---------YTLGDAPQL-ARL-DPFGLLLIEQPLEEEDVLGHAELARRIQ--TPI 236 (368)
T ss_dssp ----CTTSEEEEEC-------TTC---------CCGGGHHHH-HTT-GGGCCSEEECCSCTTCHHHHHHHHTTCS--SCE
T ss_pred ----CCCCEEEEEC-------CCC---------CCHHHHHHH-HHC-CCCCCCEEEEECCCCCHHHHHHHHHCCC--CCC
T ss_conf ----7664589706-------756---------599999999-732-3148854788548678899998876169--986
Q ss_pred ECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHH
Q ss_conf 0430000214888521003865223425453003899999999999879869995078887235899899981
Q gi|254780670|r 308 VGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVAT 380 (424)
Q Consensus 308 vGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~ 380 (424)
..|.-.. ++.-+.+.++.++++.+.+||..+|.+|++++.+.+|+++|..++++ .+.|+.=...|-+.++.
T Consensus 237 a~dE~~~-~~~~~~~~~~~~~~d~~~~~~~~~GGi~~~~~i~~~a~~~gi~~~~~-~~~~~~i~~~a~~~laa 307 (368)
T 1sjd_A 237 CLDESIV-SARAAADAIKLGAVQIVNIKPGRVGGYLEARRVHDVCAAHGIPVWCG-GMIETGLGRAANVALAS 307 (368)
T ss_dssp EESTTCC-SHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEEC-CCCCCHHHHHHHHHHHT
T ss_pred CCCCCCC-CHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEC-CCCCCHHHHHHHHHHHH
T ss_conf 6884144-43658999971998879964577787499999999999879959878-97532999999999996
No 50
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, lyase; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=99.68 E-value=1.6e-14 Score=126.34 Aligned_cols=282 Identities=17% Similarity=0.191 Sum_probs=185.7
Q ss_pred CEEEEEEEEEEE--------EC-----CCCC-----EEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHH
Q ss_conf 910589986886--------07-----9784-----29999998489767663447866477546762689865168048
Q gi|254780670|r 1 MFINDIIAREVI--------DS-----RGSP-----TIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGV 62 (424)
Q Consensus 1 m~I~~i~~r~Il--------DS-----RG~P-----TvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV 62 (424)
|.|++|..+.+. |+ +..| .|=|+|.|++|.+|.+-+.+.. . -
T Consensus 26 ~~I~~v~~~~~~~Pl~~P~~~a~~~~~~~~~~~~~~~v~V~i~tddG~~G~GE~~~~~----------------~----~ 85 (398)
T 2pp0_A 26 DRIEWVKLSLAFLPLATPVSDAKVLTGRQKPLTEVAIIIAEIRSRDGFEGVGFSYSKR----------------A----G 85 (398)
T ss_dssp CCEEEEEEEEEEEEEEEEECCHHHHTTSSCCEEEEEEEEEEEEETTSCEEEEEEEESS----------------T----T
T ss_pred CCEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCEEEEEEECCC----------------C----C
T ss_conf 8552799999981689876422010367730146479999999899998998872887----------------6----5
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCC
Q ss_conf 99999998756789759885578988864653036643221232222024489987526634984888225324564754
Q gi|254780670|r 63 LKAIAFVNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPV 142 (424)
Q Consensus 63 ~~Av~~in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~ 142 (424)
..++..+.+.++|.|+|+++.+...+=+.|....-....+.+...++-|+-+|++-+.++..++|||+.|++......|.
T Consensus 86 ~~~~~~~~~~l~p~liG~d~~~ie~i~~~l~~~~~~~~~~g~~~~A~saiD~ALwDl~gK~~~~Pl~~LLGg~~~~~~~~ 165 (398)
T 2pp0_A 86 GQGIYAHAKEIADNLLGEDPNDIDKIYTKLLWAGASVGRSGMAVQAISPIDIALWDMKAKRAGLPLAKLLGAHRDSVQCY 165 (398)
T ss_dssp HHHHHHHHHHHGGGGTTSCTTCHHHHHHHHHHHTGGGCSSTHHHHHHHHHHHHHHHHHHHHTTSBHHHHHCCSCSEEEEE
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCE
T ss_conf 89999999999998779985469999999997404206653678999999999999999883683999708754577503
Q ss_pred CCEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC---CCCCCCCCCCCCCCHHHHHHH
Q ss_conf 30000036645567766102565148877489998999999999998752000013---676557644886846899999
Q gi|254780670|r 143 PLMNILNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYST---NVGDEGGFSPNLKTADSALDL 219 (424)
Q Consensus 143 P~~NiinGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t---~vgDEGGfap~~~~~eeaL~l 219 (424)
+. ..|. ...+..+..+.. + ...++|+.. .+|. .+.++-++.
T Consensus 166 ~~---~~~~-----------------~~~~~d~~~~~~-------~-~~~~~Gf~~~K~k~~~--------~~~~~d~~~ 209 (398)
T 2pp0_A 166 NT---SGGF-----------------LHTPLDQVLKNV-------V-ISRENGIGGIKLKVGQ--------PNCAEDIRR 209 (398)
T ss_dssp EC---TTSC-----------------TTSCHHHHHHHH-------H-HHHHTTCSCEEEECCC--------SCHHHHHHH
T ss_pred EE---CCCC-----------------CCCCHHHHHHHH-------H-HHHHCCCCEEECCCCC--------CCHHHHHHH
T ss_conf 53---1566-----------------789899998888-------9-9997498700014578--------998999999
Q ss_pred HHHHHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHH
Q ss_conf 99999753853111023431104653202785111146865687899999998765448699776763104237998864
Q gi|254780670|r 220 IANSIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTN 299 (424)
Q Consensus 220 l~eAi~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~ 299 (424)
+...-+.. |.++.|.+|+- .-.+.++-+.+... +++|.+.+||+|+..+|++++.++..
T Consensus 210 v~~ir~~~----G~~~~l~vDaN----------------~~~~~~~A~~~~~~-l~~~~l~~iEeP~~~~d~~~~~~l~~ 268 (398)
T 2pp0_A 210 LTAVREAL----GDEFPLMVDAN----------------QQWDRETAIRMGRK-MEQFNLIWIEEPLDAYDIEGHAQLAA 268 (398)
T ss_dssp HHHHHHHH----CSSSCEEEECT----------------TCSCHHHHHHHHHH-HGGGTCSCEECCSCTTCHHHHHHHHH
T ss_pred HHHHHHHH----CCCCEEEEECC----------------CCCCHHHHHHHHHH-HHHCCCEEEECCCCCCCHHHHHHHCC
T ss_conf 99999984----99974997455----------------55499999999999-87539825545788407677532012
Q ss_pred HCCCCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 238836850430000214888521003865223425453003899999999999879869995
Q gi|254780670|r 300 KIGSNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIIS 362 (424)
Q Consensus 300 ~~g~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivS 362 (424)
..+ +-|.+|.- +.++...++.++.++++.+-+|+..+|-+|+++..+.+|+.+|..+++.
T Consensus 269 ~~~--ipIa~gE~-~~~~~d~~~~i~~~a~dii~~d~~~~GGit~~~~ia~lA~~~gi~v~~h 328 (398)
T 2pp0_A 269 ALD--TPIATGEM-LTSFREHEQLILGNASDFVQPDAPRVGGISPFLKIMDLAAKHGRKLAPH 328 (398)
T ss_dssp HCS--SCEEECTT-CCSHHHHHHHHHTTCCSEECCCHHHHTSHHHHHHHHHHHHHTTCEECCC
T ss_pred CCC--CCCCCCCC-CCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEC
T ss_conf 579--97647865-4676779999973898699847754796899999999999859959854
No 51
>3mzn_A Glucarate dehydratase; lyase, structural genomics, protein structure initiative, PS nysgrc; 1.85A {Chromohalobacter salexigens} PDB: 3nfu_A
Probab=99.68 E-value=3.1e-15 Score=131.55 Aligned_cols=314 Identities=16% Similarity=0.183 Sum_probs=202.6
Q ss_pred EEEEEEEEEE-------EECCCC--C----EEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHH
Q ss_conf 1058998688-------607978--4----29999998489767663447866477546762689865168048999999
Q gi|254780670|r 2 FINDIIAREV-------IDSRGS--P----TIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAF 68 (424)
Q Consensus 2 ~I~~i~~r~I-------lDSRG~--P----TvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~ 68 (424)
+|++|..-.| ++..|- | || |+|+|++|.+|.+-+|.+. .+..++
T Consensus 6 ~it~~~~~~~~~~~~~l~~~~g~h~~~~~rtI-V~v~tddG~~G~GE~~~~~--------------------~~~~~l-- 62 (450)
T 3mzn_A 6 KITKMNVVPVAGEDGFLLNLSGGHEPWFIRCV-LVLEDESGNRGVGEIPSSE--------------------GILNGL-- 62 (450)
T ss_dssp BEEEEEEEEEEEECCCBEETTEECCSEEEEEE-EEEEETTSCEEEEEEECCH--------------------HHHHHH--
T ss_pred EEEEEEEEEEECCCCCCCCCCCCCCCCCCEEE-EEEEECCCCEEEEECCCCH--------------------HHHHHH--
T ss_conf 77678999863578523345676667432159-9999899998999677967--------------------899999--
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC---------CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCC
Q ss_conf 987567897598855789888646530366432---------21232222024489987526634984888225324564
Q gi|254780670|r 69 VNDEIRTALLGCDARDQLLIDKIMIDLDGTPNK---------SRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHI 139 (424)
Q Consensus 69 in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nk---------s~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~ 139 (424)
+.++|.|+|.++.+...+-+.|......... .++...++-|+.+|++-+.++..++|||+.|++....+
T Consensus 63 --~~~~~~LiG~d~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~saID~ALwDl~GK~~g~Pv~~LLGg~gr~r 140 (450)
T 3mzn_A 63 --EKCRSLVEGARVNEVKQVLSRARGLLAQGGPEERGRQTFDLRVAVHVITAIESALFDLFGQALGMPVADLLGQYGRQR 140 (450)
T ss_dssp --HHTHHHHTTCBGGGHHHHHHHHHHHHGGGCCCCCCSSSSCCCSHHHHHHHHHHHHHHHHHHHHTCBGGGGSTTTCCCC
T ss_pred --HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCC
T ss_conf --999999769987899999999998740268432233223331368899999999999999983995999837767762
Q ss_pred CCCCCEEECCCCCCCCC-CCCCEEEEEECCCCCCHHHHHHH-----HHHHHHHHHHHHHHCCCCC---CCCCCCCCCCCC
Q ss_conf 75430000036645567-76610256514887748999899-----9999999998752000013---676557644886
Q gi|254780670|r 140 LPVPLMNILNGGIHADN-ALDFQEFMIMPVGAENIREAIRM-----GAEVFHTLKKELKSKGYST---NVGDEGGFSPNL 210 (424)
Q Consensus 140 lP~P~~NiinGG~HA~~-~l~iQEfmIiP~g~~sf~eal~~-----~~ev~~~lk~~L~~~g~~t---~vgDEGGfap~~ 210 (424)
.++|+............ .+.+.. .+.....+ ..++. ..++....++...+.|+.. .+|.
T Consensus 141 ~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~a~~~~~~~Gf~~~KiKvG~-------- 208 (450)
T 3mzn_A 141 DEVEALGYLFLLGDPDKTDLPYPR---VADPVDAW-DEVRYREAMTPEAVANLARAAYDRYGFKDFKLKGGV-------- 208 (450)
T ss_dssp SEEEBCEEEECBCCGGGSSSCCCC---CSSCCSHH-HHHTTSCBCSHHHHHHHHHHHHHHHCCSEEEEECSS--------
T ss_pred EEEEEEEEECCCCCCCCCHHHHHH---CCCCCCHH-HHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCC--------
T ss_conf 378876652146884200022332---03542004-443021348989999999999986498557105799--------
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCC
Q ss_conf 84689999999999753853111023431104653202785111146865687899999998765448699776763104
Q gi|254780670|r 211 KTADSALDLIANSIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDD 290 (424)
Q Consensus 211 ~~~eeaL~ll~eAi~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D 290 (424)
.+.++.++.+ +++.++. + |+.|.+|+ +...|.++-+.+...| + |-+.++|||+..+|
T Consensus 209 ~~~~~di~~v-~avr~~~--~--d~~l~vDa----------------N~~~~~~~Ai~~~~~l-~-~~l~w~EeP~~~~d 265 (450)
T 3mzn_A 209 LRGEEEADCI-RALHEAF--P--EARLALDP----------------NGAWKLDEAVRVLEPI-K-HLLSYAEDPCGQEG 265 (450)
T ss_dssp SCHHHHHHHH-HHHHHHC--T--TSEEEEEC----------------TTCBCHHHHHHHHGGG-G-GGCSEEESSBCCBT
T ss_pred CCHHHHHHHH-HHHHHHC--C--CCEEEEEC----------------CCCCCHHHHHHHHHHH-H-HCCCCCCCCCCCCC
T ss_conf 9979999999-9999868--9--97498706----------------6666899999999987-5-27655023767655
Q ss_pred ----HHHHHHHHHHCCCCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCC
Q ss_conf ----2379988642388368504300002148885210038652234254530038999999999998798699950788
Q gi|254780670|r 291 ----WHGWKILTNKIGSNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSG 366 (424)
Q Consensus 291 ----~~gw~~l~~~~g~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSG 366 (424)
+++++++..+.+ +-|.+| -.+++...+++.|+.++++ ++++...+|.+|+++..+.+|+.+|+.+++ |...
T Consensus 266 ~~~~~~~~~~l~~~~~--iPIa~g-E~~~~~~~~~~~i~~~a~d-i~~~d~~~GGit~~~kia~lA~~~gi~v~~-h~~~ 340 (450)
T 3mzn_A 266 GFSGRETMAEFKKRTG--LPTATN-MIATDYKQLQYAVQLNSVD-IPLADCHFWTMQGAVAVGELCNEWGMTWGS-HSNN 340 (450)
T ss_dssp TBCHHHHHHHHHHHHC--CCEEES-SSSSSHHHHHHHHHHTCCS-EEBCCHHHHCHHHHHHHHHHHHHTTCCCBC-CCCS
T ss_pred CCCHHHHHHHHHHCCC--CCCHHC-CCCCCHHHHHHHHHCCCCC-CCCCCCCCCCHHHHHHHHHHHHHCCCEEEE-CCCC
T ss_conf 4210478887742379--871010-1457868889998658861-124433554679999999999987997997-7887
Q ss_pred CCCHHHHH--HHHHHH
Q ss_conf 87235899--899981
Q gi|254780670|r 367 ETEDHTIA--DLAVAT 380 (424)
Q Consensus 367 ETeD~~ia--DLAVg~ 380 (424)
++.-.+.+ ||+.++
T Consensus 341 ~~~I~~aa~~hlaaa~ 356 (450)
T 3mzn_A 341 HFDISLAMMTHVAAAC 356 (450)
T ss_dssp CCHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHC
T ss_conf 6699999999999977
No 52
>3fxg_A Rhamnonate dehydratase; structural gemomics, enolase superfamily, NYSGXRC, target 9265J, lyase, structural genomics, PSI-2; 1.90A {Gibberella zeae ph-1} PDB: 2p0i_A
Probab=99.68 E-value=2.8e-14 Score=124.51 Aligned_cols=274 Identities=19% Similarity=0.234 Sum_probs=184.6
Q ss_pred CCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
Q ss_conf 84299999984897676634478664775467626898651680489999999875678975988557898886465303
Q gi|254780670|r 17 SPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAFVNDEIRTALLGCDARDQLLIDKIMIDLD 96 (424)
Q Consensus 17 ~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~in~~i~~~L~g~~~~dQ~~iD~~Li~lD 96 (424)
.++|=|+|.|++|.+|.+-+..+ ..++..+++.++|.|+|+|+.+...+=+.|....
T Consensus 64 ~~sviVrV~tddGi~G~GE~~~~-----------------------~~~~~~i~~~lap~LiG~dp~~ie~l~~~m~~~~ 120 (455)
T 3fxg_A 64 LGSFLVEIEATDGTVGFATGFGG-----------------------PPACWLVHQHFERFLIGADPRNTNLLFEQMYRAS 120 (455)
T ss_dssp SCEEEEEEEETTSCEEEEEEECH-----------------------HHHHHHHHHTTHHHHTTCCTTCHHHHHHHHHHHT
T ss_pred CCEEEEEEEECCCCEEEEEECCC-----------------------HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
T ss_conf 87699999979998899974085-----------------------8999999999999977998002999999999864
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCHHHH
Q ss_conf 66432212322220244899875266349848882253245647543000003664556776610256514887748999
Q gi|254780670|r 97 GTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNILNGGIHADNALDFQEFMIMPVGAENIREA 176 (424)
Q Consensus 97 gT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~NiinGG~HA~~~l~iQEfmIiP~g~~sf~ea 176 (424)
-......+...++-|+-+|++-+.++..++|||+.|+|.....+|+-. .| ......
T Consensus 121 ~~~g~~g~~~~A~sAID~ALWDl~GK~~g~PV~~LLGG~~r~~i~~y~----~~--------------------~~~~~~ 176 (455)
T 3fxg_A 121 MFYGRKGLPIAVISVIDLALWDLLGKVRNEPVYRLIGGATKERLDFYC----TG--------------------PEPTAA 176 (455)
T ss_dssp TTTCSSSHHHHHHHHHHHHHHHHHHHHHTCBGGGGTTCCSCSEEEEEE----ES--------------------SCHHHH
T ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCEEE----CC--------------------CHHHHH
T ss_conf 323787358899999999999999988099399982988677666132----15--------------------223689
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC--CCHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEE
Q ss_conf 8999999999998752000013676557644886--84689999999999753853111023431104653202785111
Q gi|254780670|r 177 IRMGAEVFHTLKKELKSKGYSTNVGDEGGFSPNL--KTADSALDLIANSIEKAGYNAGKDLLIALDCAASAFFKKEKYIL 254 (424)
Q Consensus 177 l~~~~ev~~~lk~~L~~~g~~t~vgDEGGfap~~--~~~eeaL~ll~eAi~~aGy~~g~di~i~lD~AAsefy~~~kY~~ 254 (424)
... ......... +|.+.. ....+-++.+...-+. .|.++.|.+|+-.
T Consensus 177 ~~~----------g~~~~k~~~------~~~~~~g~~~~~~die~v~aiR~a----vG~d~~L~vDan~----------- 225 (455)
T 3fxg_A 177 KAM----------GFWGGKVPL------PFCPDDGHEGLRKNVEFLRKHREA----VGPDFPIMVDCYM----------- 225 (455)
T ss_dssp HHH----------TCSCEEEEC------CCCGGGHHHHHHHHHHHHHHHHHH----HCSSSCEEEECTT-----------
T ss_pred HHH----------HHHHHCCCC------CCCCCCCCHHHHHHHHHHHHHHHH----HCCCCEEEECCCC-----------
T ss_conf 998----------887520134------655555535299999999999997----3998689864666-----------
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCEEECCHHHHHHHHHCCCCCEEEE
Q ss_conf 14686568789999999876544869977676310423799886423883685043000021488852100386522342
Q gi|254780670|r 255 KGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQLVGDDLFVTNPERLHKGINEEVANAILI 334 (424)
Q Consensus 255 ~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~IvGDDL~vTn~~rl~~gi~~~~~Naili 334 (424)
.++.++-+.+... +++|.+..+|+|+..+|++++++|.++.. .+-|.+|. -+++..-+++.|+.++++-+-+
T Consensus 226 -----~~~~~~A~~~~~~-Le~~~l~wiEEP~~~~d~~~~~~L~~~~~-~ipIa~gE-~~~t~~~~~~li~~~a~Diiq~ 297 (455)
T 3fxg_A 226 -----SLNVSYTIELVKA-CLDLNINWWEECLSPDDTDGFALIKRAHP-TVKFTTGE-HEYSRYGFRKLVEGRNLDIIQP 297 (455)
T ss_dssp -----CCCHHHHHHHHHH-TGGGCCSEEECCSCGGGGGGHHHHHHHCT-TSEEEECT-TCCHHHHHHHHHTTCCCSEECC
T ss_pred -----CCCHHHHHHHHHH-HCCCCCCEEECCCCCCCHHHHHHHHHHCC-CCCCCCCC-CCCCHHHHHHHHHCCCCCEEEE
T ss_conf -----7899999998742-12335520465888013899999998567-99864776-7688999987776377618984
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHC
Q ss_conf 54530038999999999998798699950788872358998999819
Q gi|254780670|r 335 KPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVATN 381 (424)
Q Consensus 335 K~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~~ 381 (424)
|+.-+|=+|++++.+.+|+.+|..++ .|-+|+ .-.||+.++.
T Consensus 298 dv~~~GGit~~~kIa~lA~a~gi~v~-pH~~g~----~~~hl~aa~~ 339 (455)
T 3fxg_A 298 DVMWLGGLTELLKVAALAAAYDVPVV-PHASGP----YSYHFQISQP 339 (455)
T ss_dssp CTTTSSCHHHHHHHHHHHHTTTCCBC-CCSCTH----HHHHHHTTCT
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEE-EECCHH----HHHHHHHHHH
T ss_conf 78755899999999999998599699-747289----9999999855
No 53
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, enolase, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=99.68 E-value=1.6e-13 Score=118.92 Aligned_cols=291 Identities=15% Similarity=0.200 Sum_probs=196.8
Q ss_pred CEEEEEEEEE--------EEECCC----CCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHH
Q ss_conf 9105899868--------860797----8429999998489767663447866477546762689865168048999999
Q gi|254780670|r 1 MFINDIIARE--------VIDSRG----SPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAF 68 (424)
Q Consensus 1 m~I~~i~~r~--------IlDSRG----~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~ 68 (424)
|+|++|..+. +..|+| +.++-|+|++++|.+|.+-+... .......
T Consensus 4 ~kI~~ie~~~~~~pl~~p~~~a~g~~~~r~~~lV~i~t~~G~~G~GE~~~~----------------------~~~~~~~ 61 (382)
T 2gdq_A 4 VKIVRIETFPLFHRLEKPYGDANGFKRYRTCYLIRIITESGIDGWGECVDW----------------------LPALHVG 61 (382)
T ss_dssp CBEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTSCEEEEEECSC----------------------HHHHHHH
T ss_pred CEEEEEEEEEEEEECCCCEECCCEEEEEEEEEEEEEEECCCCEEEEECCCC----------------------HHHHHHH
T ss_conf 678389999998746787476885899879999999989999899954687----------------------4789999
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEEC
Q ss_conf 98756789759885578988864653036643221232222024489987526634984888225324564754300000
Q gi|254780670|r 69 VNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNIL 148 (424)
Q Consensus 69 in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~Nii 148 (424)
+.+.++|.|+|+++.+...+-..|... ...++.|+.+|++-+.++..++|||+.|++.....+|+... .
T Consensus 62 ~~~~l~~~liG~d~~~~~~~~~~l~~~---------~~~a~said~AlwDl~gK~~~~pl~~LLGg~~r~~v~~~~s--~ 130 (382)
T 2gdq_A 62 FTKRIIPFLLGKQAGSRLSLVRTIQKW---------HQRAASAVSMALTEIAAKAADCSVCELWGGRYREEIPVYAS--F 130 (382)
T ss_dssp HHHTHHHHHTTSBTTCHHHHHHHHHHH---------CHHHHHHHHHHHHHHHHHHTTSBHHHHTTCCSCSEEEEEEE--C
T ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCEEEECC--C
T ss_conf 999999997599900678999999888---------78899999999999886663002100137644441132101--0
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 3664556776610256514887748999899999999999875200001---3676557644886846899999999997
Q gi|254780670|r 149 NGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYS---TNVGDEGGFSPNLKTADSALDLIANSIE 225 (424)
Q Consensus 149 nGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~---t~vgDEGGfap~~~~~eeaL~ll~eAi~ 225 (424)
..+. .........++ .+.+.+ ++|+. ..+|. .+.++-++.+...-+
T Consensus 131 ~~~~---------------~~~~~~~~~~~-------~~~~~~-~~Gf~~~KiKvg~--------~~~~~d~~~v~~ir~ 179 (382)
T 2gdq_A 131 QSYS---------------DSPQWISRSVS-------NVEAQL-KKGFEQIKVKIGG--------TSFKEDVRHINALQH 179 (382)
T ss_dssp CCBC---------------SSTTHHHHHHH-------HHHHHH-TTTCCEEEEECSS--------SCHHHHHHHHHHHHH
T ss_pred CCCC---------------CCHHHHHHHHH-------HHHHHH-HCCCCCCCCCCCC--------CCHHHHHHHHHHHHH
T ss_conf 0245---------------78155999999-------999999-7078733566789--------999999999999987
Q ss_pred HCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHC-CEEEEECCCCCCCHHHHHHHHHHCCCC
Q ss_conf 5385311102343110465320278511114686568789999999876544-869977676310423799886423883
Q gi|254780670|r 226 KAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQY-PIYSIEDGMSEDDWHGWKILTNKIGSN 304 (424)
Q Consensus 226 ~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~y-PI~sIEDP~~e~D~~gw~~l~~~~g~~ 304 (424)
. .|.++.|.+|+. ...+.++.+.+...| ++| ++.++|+|+..+|+++..++..+.+-
T Consensus 180 ~----~g~~~~l~vDaN----------------~~~~~~~a~~~~~~l-~~~~~l~~~EeP~p~~~~~~~~~l~~~~~~- 237 (382)
T 2gdq_A 180 T----AGSSITMILDAN----------------QSYDAAAAFKWERYF-SEWTNIGWLEEPLPFDQPQDYAMLRSRLSV- 237 (382)
T ss_dssp H----HCTTSEEEEECT----------------TCCCHHHHHTTHHHH-TTCSCEEEEECCSCSSCHHHHHHHHTTCSS-
T ss_pred H----CCCCEEEEECCC----------------CCCCHHHHHHHHHHH-HHHHCCCCCCCCCCCCCHHHHHHHHHHCCC-
T ss_conf 5----388179993476----------------532589999999998-765134540367783579999988872899-
Q ss_pred EEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHC
Q ss_conf 68504300002148885210038652234254530038999999999998798699950788872358998999819
Q gi|254780670|r 305 CQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVATN 381 (424)
Q Consensus 305 ~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~~ 381 (424)
-|.+|. .++++.-+.+.++.++++.+.+|+..+|.+|++++.+++|+.+|..+++ |-.+ +.-.+++.+.++..
T Consensus 238 -pIa~dE-~~~~~~~~~~~i~~~~~d~~~~d~~~~GGit~~~~i~~~a~~~g~~v~~-h~~~-~~i~~~a~~~~~a~ 310 (382)
T 2gdq_A 238 -PVAGGE-NMKGPAQYVPLLSQRCLDIIQPDVMHVNGIDEFRDCLQLARYFGVRASA-HAYD-GSLSRLYALFAQAC 310 (382)
T ss_dssp -CEEECT-TCCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHHTCEECC-CCSS-CSHHHHHHHHHHHT
T ss_pred -CCCCCC-CCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE-CCCC-HHHHHHHHHHHHHH
T ss_conf -963886-5789999999998278651214755368899999999999973991875-6885-49999999999996
No 54
>3no1_A Isomerase, mandelate racemase/muconate lactonizing enzyme; enolase,metal-binding,PSI-II, NYSGXRC, structural genomics; 2.16A {Marine actinobacterium PHSC20C1} PDB: 3msy_A
Probab=99.67 E-value=2e-13 Score=118.19 Aligned_cols=301 Identities=17% Similarity=0.185 Sum_probs=194.1
Q ss_pred CEEEEEEEEEEE--------ECCC----CCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHH
Q ss_conf 910589986886--------0797----8429999998489767663447866477546762689865168048999999
Q gi|254780670|r 1 MFINDIIAREVI--------DSRG----SPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAF 68 (424)
Q Consensus 1 m~I~~i~~r~Il--------DSRG----~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~ 68 (424)
|+|++|.++.+- .|.| +++|-|+|.|++|.+|.+-+.. + +.+.......
T Consensus 22 mkI~~i~~~~~~~Pl~~p~~~s~~~~~~~~~vlVrv~td~G~~G~Ge~~~--~-----------------~~~~~~~~~~ 82 (398)
T 3no1_A 22 LTITRIETIPMVAPLAREFRGSHYHMTHRATIVTRVHTDAGIIGEAYTGD--E-----------------HETMFDIDRI 82 (398)
T ss_dssp CBEEEEEEEEEEECCC-----------CEEEEEEEEEESSSCEEEEEECC--C-----------------CTTHHHHHHH
T ss_pred CEEEEEEEEEEEEECCCCEECCCEEEEEEEEEEEEEEECCCCEEEEEECC--C-----------------CCCHHHHHHH
T ss_conf 78979999999820578878888899998999999997999999998258--7-----------------5568999999
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEE
Q ss_conf 987567897598855789888646530366432-2123222202448998752663498488822532456475430000
Q gi|254780670|r 69 VNDEIRTALLGCDARDQLLIDKIMIDLDGTPNK-SRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNI 147 (424)
Q Consensus 69 in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nk-s~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~Ni 147 (424)
+++.++|.|+|+++.+...+-+.|..+--.... ..++-.++.|+-+|++-+.++..++|||+.|++......+.. ...
T Consensus 83 i~~~l~p~liG~~~~~i~~l~~~~~~~~~~~~~~~~~~~~A~saiDiAlwDl~gK~~g~Pl~~LLGg~~~~~~~~~-~~~ 161 (398)
T 3no1_A 83 IHEELAPTLIGQDAMAIERLWDSGYKVTFDILRDRRLGLVALAAVNTAIWDAVGKALKMPLWKLWGGYRNELPMIA-IGG 161 (398)
T ss_dssp HHHTTGGGTTTSBTTCHHHHHHHHGGGGCCTTSCHHHHHHHHHHHHHHHHHHHHHHTTCBHHHHTTCSCSEEEEEE-EEC
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEE-EEC
T ss_conf 9999899975998557999999998741432146640389999999999999977645760541588787662365-301
Q ss_pred CCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 03664556776610256514887748999899999999999875200001367655764488684689999999999753
Q gi|254780670|r 148 LNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYSTNVGDEGGFSPNLKTADSALDLIANSIEKA 227 (424)
Q Consensus 148 inGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t~vgDEGGfap~~~~~eeaL~ll~eAi~~a 227 (424)
..+ .......+.+ ++. .++|+.+-.=.-|+ .+..+-++.+...-+.
T Consensus 162 ~~~-----------------~~~~~~~~~~----------~~~-~~~Gf~~~Kik~~~-----~~~~~d~~~v~~~r~~- 207 (398)
T 3no1_A 162 YYG-----------------EPLGSIADEM----------HNY-QELGLAGVKFKVGG-----LSAAEDAARITAAREA- 207 (398)
T ss_dssp CTT-----------------CTTCCHHHHH----------HHH-HHTTBSEEEEECSS-----SCHHHHHHHHHHHHHH-
T ss_pred CCC-----------------CCHHHHHHHH----------HHH-HHCCCCEEEECCCC-----CCHHHHHHHHHHHHHH-
T ss_conf 368-----------------9667999999----------997-64487537752589-----9989999999999987-
Q ss_pred CCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCC-CCHHHHHHHHHHCCCCEE
Q ss_conf 8531110234311046532027851111468656878999999987654486997767631-042379988642388368
Q gi|254780670|r 228 GYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSE-DDWHGWKILTNKIGSNCQ 306 (424)
Q Consensus 228 Gy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e-~D~~gw~~l~~~~g~~~~ 306 (424)
.|.++.|.+|+ +.-.+.++-+++... +++|.+.++|+|+.. +|++++..+....+ +-
T Consensus 208 ---~g~~~~l~vDa----------------n~~~~~~~A~~~~~~-l~~~~l~~iEeP~~~~~~~~~~~~~~~~~~--~p 265 (398)
T 3no1_A 208 ---AGDDFIICIDA----------------NQGYKPAVAVDLSRR-IADLNIRWFEEPVEWHNDKRSMRDVRYQGS--VP 265 (398)
T ss_dssp ---HCSSSEEEEEC----------------TTCBCHHHHHHHHHH-TTTSCCSCEESCBCSTTHHHHHHHHHHHSS--SC
T ss_pred ---CCCCCEEECCC----------------CCCCCHHHHHHHHHH-HHHCCCEEEECCCCCHHHHHHHHHHHCCCC--CC
T ss_conf ---59984895134----------------455689999997543-653396577658884002778766530478--88
Q ss_pred EECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCC
Q ss_conf 50430000214888521003865223425453003899999999999879869995078887235899899981998
Q gi|254780670|r 307 LVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVATNCG 383 (424)
Q Consensus 307 IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~~a~ 383 (424)
|.+|.- +.+..-++..++.++++.+-+|+..+|-+|++++.+.+|+.+|+. +.+|-++ ..-+|++.++...
T Consensus 266 i~~gE~-~~~~~~~~~~i~~~a~dii~~d~~~~GGit~~~~i~~~A~~~gi~-v~~h~~~----~~~~h~~aa~~~~ 336 (398)
T 3no1_A 266 VCAGQT-EFSASGCRDLMETGAIDVCNFDSSWSGGPTAWLRTAAIATSYDVQ-MGHHEEP----QVSTHLLASQPHG 336 (398)
T ss_dssp EEECTT-CSSHHHHHHHHHHTCCSEECCCGGGTTCHHHHHHHHHHHHHTTCE-ECCCSCH----HHHHHHHHHSTTB
T ss_pred CCCCCC-CCCHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCE-EECCCHH----HHHHHHHHHCCCC
T ss_conf 646656-678889999998098750135702118789999999999888988-9747589----9999999974366
No 55
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=99.66 E-value=1.9e-13 Score=118.31 Aligned_cols=291 Identities=19% Similarity=0.219 Sum_probs=192.8
Q ss_pred CEEEEEEEEEE--------EECCCCCE---EEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH
Q ss_conf 91058998688--------60797842---99999984897676634478664775467626898651680489999999
Q gi|254780670|r 1 MFINDIIAREV--------IDSRGSPT---IEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAFV 69 (424)
Q Consensus 1 m~I~~i~~r~I--------lDSRG~PT---vEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~i 69 (424)
|+|++|..+.+ -.|+|.-| +=+.+.+++|..|.+-+.+-.. +.|.+..+..+.+.+
T Consensus 8 mkI~~i~~~~~~lPl~~p~~~s~g~~~~~~~~v~~~~~dG~~G~GE~~~~~~-------------p~~~~et~~~~~~~l 74 (375)
T 1r0m_A 8 FKIEAAEIVVARLPLKFRFETSFGVQTHKVVPLLILHGEGVQGVAEGTMEAR-------------PMYREETIAGALDLL 74 (375)
T ss_dssp EECCEEEEEEEEEEBC----------CEEEEEEEEEEETTEEEEEECCCBSS-------------SSSSSCBHHHHHHHH
T ss_pred EEEEEEEEEEEEECCCCCEECCCEEEEEEEEEEEEEECCCCEEEEEEECCCC-------------CCCCCCHHHHHHHHH
T ss_conf 1287999999970467876887746998899999998689889997636778-------------875800099999999
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEECC
Q ss_conf 87567897598855789888646530366432212322220244899875266349848882253245647543000003
Q gi|254780670|r 70 NDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNILN 149 (424)
Q Consensus 70 n~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~Niin 149 (424)
++.+.|.|+|+++.+...|-+.|-.+.+ ..-++-|+.+|++-+.++..++|||+.|++.. ..+|+......
T Consensus 75 ~~~~~p~lig~~~~~~~~i~~~l~~~~~-------~~~a~said~AlwDl~gK~~~~pl~~LLG~~~-~~~~~~~~~~~- 145 (375)
T 1r0m_A 75 RGTFLPAILGQTFANPEAVSDALGSYRG-------NRMARAMVEMAAWDLWARTLGVPLGTLLGGHK-EQVEVGVSLGI- 145 (375)
T ss_dssp HHTHHHHHTTCEESSHHHHHHTTTTSCS-------CHHHHHHHHHHHHHHHHHHHTCBHHHHHTCCC-SEEEBCEEECC-
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHCCC-------CHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCC-CCEEEEEECCC-
T ss_conf 9988888638996679999999987337-------56899999999999999764997042248976-63466531024-
Q ss_pred CCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 664556776610256514887748999899999999999875200001---36765576448868468999999999975
Q gi|254780670|r 150 GGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYS---TNVGDEGGFSPNLKTADSALDLIANSIEK 226 (424)
Q Consensus 150 GG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~---t~vgDEGGfap~~~~~eeaL~ll~eAi~~ 226 (424)
..+ .+.+ ...+++ ..+.|+. ..+| |..+ .+.+..+.+++
T Consensus 146 --------------------~~~-~~~~------~~~~~~-~~~~Gf~~~K~kvg------~~~d--~~~~~~~~~~~-- 187 (375)
T 1r0m_A 146 --------------------QAD-EQAT------VDLVRR-HVEQGYRRIKLKIK------PGWD--VQPVRATREAF-- 187 (375)
T ss_dssp --------------------CSS-HHHH------HHHHHH-HHHTTCSCEEEECB------TTBS--HHHHHHHHHHC--
T ss_pred --------------------CCC-CHHH------HHHHHH-HHHCCCCCCCCCCC------CCHH--HHHHHHHHHHC--
T ss_conf --------------------553-0589------999999-87559862334566------5014--89999987637--
Q ss_pred CCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEE
Q ss_conf 38531110234311046532027851111468656878999999987654486997767631042379988642388368
Q gi|254780670|r 227 AGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQ 306 (424)
Q Consensus 227 aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~ 306 (424)
.|+.|.+|+ ++.| +.++-+. +.. +++|+|.++|||+..+|++++.++.+..+ +-
T Consensus 188 ------~d~~l~vDa-------N~~~---------~~~~A~~-~~~-l~~~~i~~iEeP~~~~d~~~~~~l~~~~~--ip 241 (375)
T 1r0m_A 188 ------PDIRLTVDA-------NSAY---------TLADAGR-LRQ-LDEYDLTYIEQPLAWDDLVDHAELARRIR--TP 241 (375)
T ss_dssp ------TTSCEEEEC-------TTCC---------CGGGHHH-HHT-TGGGCCSCEECCSCTTCSHHHHHHHHHCS--SC
T ss_pred ------CCCEECCCH-------HHCC---------CHHHHHH-HHH-HCCCCCCHHHHCCCCCCHHHHHHHHHCCC--CC
T ss_conf ------871020240-------3206---------8999998-752-13235325651368214799999864579--88
Q ss_pred EECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHH
Q ss_conf 5043000021488852100386522342545300389999999999987986999507888723589989998
Q gi|254780670|r 307 LVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVA 379 (424)
Q Consensus 307 IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg 379 (424)
|.+|.- ++++.-+.+.++.++++.+.+|+..+|.+|++++.+.+|+++|..+++++ ..|+.=...+-+.++
T Consensus 242 ia~dE~-~~~~~~~~~~i~~~~~d~i~~d~~~~GGit~~~ki~~~A~~~gi~~~~~~-~~~s~i~~aa~~hla 312 (375)
T 1r0m_A 242 LCLDES-VASASDARKALALGAGGVINLKVARVGGHAESRRVHDVAQSFGAPVWCGG-MLESGIGRAHNIHLS 312 (375)
T ss_dssp EEESTT-CCSHHHHHHHHHHTSCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECC-CCCCHHHHHHHHHHT
T ss_pred CCCCEE-CCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEECC-CCCCHHHHHHHHHHH
T ss_conf 648700-24504589999818987783045556857999999999998799788789-754699999999999
No 56
>3h12_A Mandelate racemase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, E PSI-2; 1.50A {Bordetella bronchiseptica} PDB: 3op2_A*
Probab=99.66 E-value=1.8e-13 Score=118.43 Aligned_cols=301 Identities=18% Similarity=0.217 Sum_probs=193.7
Q ss_pred CEEEEEEEEEEE----------ECCC----CCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHH
Q ss_conf 910589986886----------0797----84299999984897676634478664775467626898651680489999
Q gi|254780670|r 1 MFINDIIAREVI----------DSRG----SPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAI 66 (424)
Q Consensus 1 m~I~~i~~r~Il----------DSRG----~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av 66 (424)
|+|++|..+.+- .+.+ ++.|=|+|++++|..|.+-+..+.+ .....
T Consensus 3 MKI~~i~~~~~~~Pl~~~~~~~~~~~~~~~~~~vlV~v~td~G~~G~GE~~~~~~--------------------~~~~~ 62 (397)
T 3h12_A 3 LKITEVKAHALSTPIPERMRVESGAGLKLNRQMILVEVRTDEGVTGVGSPSGPYD--------------------LAVLK 62 (397)
T ss_dssp CCEEEEEEEEEEEECCGGGCCEETTEEBCEEEEEEEEEEETTSCCEEECCCSSSC--------------------HHHHH
T ss_pred CEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCEEEEECCCCCC--------------------HHHHH
T ss_conf 3887799999973578885100253047542799999998999889984368878--------------------89999
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC--CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCC
Q ss_conf 9998756789759885578988864653036643--22123222202448998752663498488822532456475430
Q gi|254780670|r 67 AFVNDEIRTALLGCDARDQLLIDKIMIDLDGTPN--KSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPL 144 (424)
Q Consensus 67 ~~in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~n--ks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~ 144 (424)
..+.+.++|.|+|+|+.+-..+-+.|...--..+ ...+...++-|+-+|++-+.++..++|||+.|++......++..
T Consensus 63 ~~i~~~l~p~liG~d~~~i~~i~~~~~~~~~~~~~~~~~~~~~A~said~AlwDl~gK~~~~Pv~~lLG~~~~~~~~~~~ 142 (397)
T 3h12_A 63 RAIEDVIGPQLIGEDPANINYLWHKVFHGEVSRNLGHRSVGIAAMSGVDIALWDLKGRAMNQPIYQLLGGKFHTRGVRAY 142 (397)
T ss_dssp HHHHHTTGGGTTTSCTTCHHHHHHHHHHHTHHHHHCSBSHHHHHHHHHHHHHHHHHHHHHTSBHHHHTTSCSCSSCEEEE
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE
T ss_conf 99999999997699878999999999986565404653167899999999999998645257630126874333453102
Q ss_pred EEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC---CCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 000036645567766102565148877489998999999999998752000013---67655764488684689999999
Q gi|254780670|r 145 MNILNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYST---NVGDEGGFSPNLKTADSALDLIA 221 (424)
Q Consensus 145 ~NiinGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t---~vgDEGGfap~~~~~eeaL~ll~ 221 (424)
...+. ...+..+..+.. ++ ..++|+.+ .+|. ...+-.+.+.
T Consensus 143 ~~~~~-------------------~~~~~~~~~~~~-------~~-~~~~Gf~~~Kik~g~---------~~~~d~~~v~ 186 (397)
T 3h12_A 143 ASSIY-------------------WDLTPDQAADEL-------AG-WVEQGFTAAKLKVGR---------APRKDAANLR 186 (397)
T ss_dssp EEEEC-------------------SSCCHHHHHHHH-------HH-HHHHTCSEEEEECCS---------CHHHHHHHHH
T ss_pred EECCC-------------------CCCCHHHHHHHH-------HH-HHHHCCCCCCCCCCC---------CCHHHHHHHH
T ss_conf 21033-------------------578879999999-------98-787377631013576---------6088999999
Q ss_pred HHHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHC
Q ss_conf 99975385311102343110465320278511114686568789999999876544869977676310423799886423
Q gi|254780670|r 222 NSIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKI 301 (424)
Q Consensus 222 eAi~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~ 301 (424)
...+. .|.++.|.+|+ +.-.+.++-+.+... +++|.+..+|+|+..+|+++...+....
T Consensus 187 ~~r~~----~g~~~~l~vDa----------------N~~~~~~~A~~~~~~-l~~~~~~~~EeP~~~~~~~~~~~~~~~~ 245 (397)
T 3h12_A 187 AMRQR----VGADVEILVDA----------------NQSLGRHDALAMLRI-LDEAGCYWFEEPLSIDDIEGHRILRAQG 245 (397)
T ss_dssp HHHHH----HCSSSEEEEEC----------------TTCCCHHHHHHHHHH-HHHTTCSEEESCSCTTCHHHHHHHHTTC
T ss_pred HHHHH----CCCCCEEEECC----------------CCCCCHHHHHHHHHH-HHHCCCCEEECCCCCCHHHHHHHHHHCC
T ss_conf 97643----39841463044----------------446999999999987-6651884586687855389999997315
Q ss_pred CCCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHH--HHHHHHH
Q ss_conf 88368504300002148885210038652234254530038999999999998798699950788872358--9989998
Q gi|254780670|r 302 GSNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHT--IADLAVA 379 (424)
Q Consensus 302 g~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~--iaDLAVg 379 (424)
. .+-|.+|. -++++.-+++.++.++++.+-+|+.-+|-+|++++.+.+|+.+|..+ +.|.. ++.=.+ -+||+.+
T Consensus 246 ~-~~pIa~gE-~~~~~~~~~~~i~~~a~div~~d~~~~GGit~~~~ia~~A~~~gi~~-~~h~~-~~~i~~aa~~hlaaa 321 (397)
T 3h12_A 246 T-PVRIATGE-NLYTRNAFNDYIRNDAIDVLQADASRAGGITEALAISASAASAHLAW-NPHTF-NDIITVAANLHLVAA 321 (397)
T ss_dssp C-SSEEEECT-TCCHHHHHHHHHHTTCCSEECCCTTTSSCHHHHHHHHHHHHHTTCEE-CCCCT-TCHHHHHHHHHHHHH
T ss_pred C-CCCEECCC-CHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEE-EECCC-CCHHHHHHHHHHHHH
T ss_conf 8-98620553-02347888875214666543577786887899999999999879979-82788-738999999999996
Q ss_pred HCC
Q ss_conf 199
Q gi|254780670|r 380 TNC 382 (424)
Q Consensus 380 ~~a 382 (424)
+..
T Consensus 322 ~~n 324 (397)
T 3h12_A 322 SPH 324 (397)
T ss_dssp SCS
T ss_pred CCC
T ss_conf 788
No 57
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=99.66 E-value=4.8e-13 Score=115.38 Aligned_cols=294 Identities=18% Similarity=0.212 Sum_probs=191.2
Q ss_pred CEEEEEEEE--------EEEE-CCC----CCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHH
Q ss_conf 910589986--------8860-797----842999999848976766344786647754676268986516804899999
Q gi|254780670|r 1 MFINDIIAR--------EVID-SRG----SPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIA 67 (424)
Q Consensus 1 m~I~~i~~r--------~IlD-SRG----~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~ 67 (424)
++|++|+.+ .+.+ |+| ...|-|+|++++|..|.+-+.+. + +.+.. ...
T Consensus 2 ~~I~~i~~~~~~iPl~~p~~~~s~g~~~~~~~viV~i~t~~G~~G~GE~~~~---~-------------~~~~~---~~~ 62 (371)
T 2ovl_A 2 SLIERVRTDLYRIPLPTRLTDSTHGAMMDFELITVRIEDSDGATGLGYTYTV---N-------------HGGAA---VAT 62 (371)
T ss_dssp -CEEEEEEEEEEEEEEEEEBCTTTCCEEEEEEEEEEEEETTSCEEEEEEEEE---S-------------SSHHH---HHH
T ss_pred CCEEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEEEECCCCEEEEEEECC---C-------------CCHHH---HHH
T ss_conf 9488999999980289985425777188888999999989999899988798---8-------------86799---999
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHH-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEE
Q ss_conf 998756789759885578988864653-0366432212322220244899875266349848882253245647543000
Q gi|254780670|r 68 FVNDEIRTALLGCDARDQLLIDKIMID-LDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMN 146 (424)
Q Consensus 68 ~in~~i~~~L~g~~~~dQ~~iD~~Li~-lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~N 146 (424)
.+++.+.|.|+|+++.+...+-+.|.. +.-..+. ..-..|+-|+.+|++-+.++..++|||+.|++.... .|++...
T Consensus 63 ~i~~~l~~~lig~d~~~~~~~~~~~~~~~~~~~~~-g~~~~A~said~AlwDl~gK~~~~Pl~~llG~~~~~-~~~~~~~ 140 (371)
T 2ovl_A 63 MVDKDLRGCLLGADAEQIEKIWQSMWWRLHYAGRG-GHATSAISAVDIALWDLKGIRARTPLWKLFGGYDPV-VPVYAGG 140 (371)
T ss_dssp HHHHTTHHHHTTSCTTCHHHHHHHHHHHTCTTCSS-THHHHHHHHHHHHHHHHHHHHTTSBHHHHTTCCCSE-EEEEEEC
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC-CHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC-CEEEECC
T ss_conf 99999899866998567999999999853321665-368899999999999997757448188956776556-2144114
Q ss_pred ECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 003664556776610256514887748999899999999999875200001---36765576448868468999999999
Q gi|254780670|r 147 ILNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYS---TNVGDEGGFSPNLKTADSALDLIANS 223 (424)
Q Consensus 147 iinGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~---t~vgDEGGfap~~~~~eeaL~ll~eA 223 (424)
.. ...+..+..+ .+++.+ ++|+. ..+|. .+.++-++.+...
T Consensus 141 ~~--------------------~~~~~~~~~~-------~~~~~~-~~Gf~~~K~Kvg~--------~~~~~di~~v~~i 184 (371)
T 2ovl_A 141 ID--------------------LELPVADLKT-------QADRFL-AGGFRAIKMKVGR--------PDLKEDVDRVSAL 184 (371)
T ss_dssp CB--------------------TTSCHHHHHH-------HHHHHH-HTTCSCEEEECCC--------SSHHHHHHHHHHH
T ss_pred CC--------------------CCCCHHHHHH-------HHHHHH-HCCCCEEEECCCC--------CCHHHHHHHHHHH
T ss_conf 46--------------------7899999999-------999999-7388778304576--------6479999999999
Q ss_pred HHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCC
Q ss_conf 97538531110234311046532027851111468656878999999987654486997767631042379988642388
Q gi|254780670|r 224 IEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGS 303 (424)
Q Consensus 224 i~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~ 303 (424)
-+.. |.++.|.+|+ +.-++.++-+.+...| ++|++.+||+|+..+|+++..++.++.+
T Consensus 185 r~~~----g~~~~l~vDa----------------N~~~~~~~A~~~~~~l-~~~~~~~iEeP~~~~~~~~~~~l~~~~~- 242 (371)
T 2ovl_A 185 REHL----GDSFPLMVDA----------------NMKWTVDGAIRAARAL-APFDLHWIEEPTIPDDLVGNARIVRESG- 242 (371)
T ss_dssp HHHH----CTTSCEEEEC----------------TTCSCHHHHHHHHHHH-GGGCCSEEECCSCTTCHHHHHHHHHHHC-
T ss_pred HHHC----CCCCEEEECC----------------CCCCCHHHHHHHHHHH-HCCCCCEEECCCCCCCHHHHHHHHHCCC-
T ss_conf 9875----8762277636----------------7789999999999975-3139946864778537888999985247-
Q ss_pred CEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHH
Q ss_conf 36850430000214888521003865223425453003899999999999879869995078887235899899981
Q gi|254780670|r 304 NCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVAT 380 (424)
Q Consensus 304 ~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~ 380 (424)
+-|..|. -++++.-+.+.++.++++-+.+|+...|.+|++++.+.+|+++|+.+++ |..++ .-+|++.++
T Consensus 243 -ipia~dE-~~~~~~~~~~~i~~~a~di~~~d~~~~GGit~~~~i~~~A~~~gi~v~~-h~~~~----~~~h~~aa~ 312 (371)
T 2ovl_A 243 -HTIAGGE-NLHTLYDFHNAVRAGSLTLPEPDVSNIGGYTTFRKVAALAEANNMLLTS-HGVHD----LTVHALASV 312 (371)
T ss_dssp -SCEEECT-TCCSHHHHHHHHHHTCCSEECCCTTTTTSHHHHHHHHHHHHHTTCCEEE-CSCHH----HHHHHHTSC
T ss_pred -CCCCCCC-CCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEE-CCHHH----HHHHHHHHC
T ss_conf -8755873-0055888999997599888972823169889999999999986998982-58899----999999975
No 58
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=99.65 E-value=4.2e-13 Score=115.78 Aligned_cols=293 Identities=19% Similarity=0.246 Sum_probs=189.4
Q ss_pred CEEEEEEEEEE--------EECCCC----CEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHH
Q ss_conf 91058998688--------607978----429999998489767663447866477546762689865168048999999
Q gi|254780670|r 1 MFINDIIAREV--------IDSRGS----PTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAF 68 (424)
Q Consensus 1 m~I~~i~~r~I--------lDSRG~----PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~ 68 (424)
|.|++|..+.+ -.|+|. +.|=|+|++++|..|.+-+++ |.+.+. ..+..
T Consensus 4 ~~I~~i~~~~~~~Pl~~p~~~s~g~~~~~~~vlv~i~t~~G~~G~GE~~~------------------~~~~~~-~~~~~ 64 (359)
T 1mdl_A 4 VLITGLRTRAVNVPLAYPVHTAVGTVGTAPLVLIDLATSAGVVGHSYLFA------------------YTPVAL-KSLKQ 64 (359)
T ss_dssp CBEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEEEC------------------SSGGGH-HHHHH
T ss_pred CEEEEEEEEEEEECCCCCEECCCEEEEEEEEEEEEEEECCCCEEEEEEEC------------------CCCHHH-HHHHH
T ss_conf 88979999999941578767768799898999999998999999997618------------------860139-99999
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEEC
Q ss_conf 98756789759885578988864653036643221232222024489987526634984888225324564754300000
Q gi|254780670|r 69 VNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNIL 148 (424)
Q Consensus 69 in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~Nii 148 (424)
+-+.++|.|+|.+..........+...--..+. .+-..+.-|+.+|++-+.++..++|+|+.|++... |+|..-.+
T Consensus 65 ~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~said~AlwDl~gk~~~~pl~~Llgg~~~---~v~~~~~~ 140 (359)
T 1mdl_A 65 LLDDMAAMIVNEPLAPVSLEAMLAKRFCLAGYT-GLIRMAAAGIDMAAWDALGKVHETPLVKLLGANAR---PVQAYDSH 140 (359)
T ss_dssp HHHHHHHHHTTSBSCHHHHHHHHHHHTTTTCSS-HHHHHHHHHHHHHHHHHHHHHTTCBHHHHTTCCCC---CEEEEEEC
T ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC-CHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCC---CCCEECCC
T ss_conf 999999997678788578999999986532555-42789999999986045213024856887299744---45201023
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC---CCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 36645567766102565148877489998999999999998752000013---676557644886846899999999997
Q gi|254780670|r 149 NGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYST---NVGDEGGFSPNLKTADSALDLIANSIE 225 (424)
Q Consensus 149 nGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t---~vgDEGGfap~~~~~eeaL~ll~eAi~ 225 (424)
+..+..+..+ .+++ ..++|+.+ .+|. .+.++-++.+...-+
T Consensus 141 --------------------~~~~~~~~~~-------~~~~-~~~~G~~~~KiKvg~--------~~~~~d~~~v~~ir~ 184 (359)
T 1mdl_A 141 --------------------SLDGVKLATE-------RAVT-AAELGFRAVKTRIGY--------PALDQDLAVVRSIRQ 184 (359)
T ss_dssp --------------------CSCHHHHHHH-------HHHH-HHHTTCSEEEEECCC--------SSHHHHHHHHHHHHH
T ss_pred --------------------CCCCHHHHHH-------HHHH-HHHHCCCEEEECCCC--------CCCHHHHHHHHHHHH
T ss_conf --------------------5899999999-------9999-998478814202467--------662889999999998
Q ss_pred HCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCE
Q ss_conf 53853111023431104653202785111146865687899999998765448699776763104237998864238836
Q gi|254780670|r 226 KAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNC 305 (424)
Q Consensus 226 ~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~ 305 (424)
.. |.++.|.+|+. ...+.++-+.+... +++|++.++|+|+..+||++++++..+.+ +
T Consensus 185 ~~----g~~~~l~vDaN----------------~~~~~~~a~~~~~~-l~~~~~~~iEeP~~~~~~~~~~~l~~~~~--i 241 (359)
T 1mdl_A 185 AV----GDDFGIMVDYN----------------QSLDVPAAIKRSQA-LQQEGVTWIEEPTLQHDYEGHQRIQSKLN--V 241 (359)
T ss_dssp HH----CSSSEEEEECT----------------TCSCHHHHHHHHHH-HHHHTCSCEECCSCTTCHHHHHHHHHTCS--S
T ss_pred HC----CCCCEEECCCC----------------CCCCHHHHHHHHHH-HHCCCCCCCCCCCCCCCHHHHHHHHHHCC--C
T ss_conf 61----88824601644----------------57888999988777-63368523138999679999899998518--9
Q ss_pred EEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHC
Q ss_conf 8504300002148885210038652234254530038999999999998798699950788872358998999819
Q gi|254780670|r 306 QLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVATN 381 (424)
Q Consensus 306 ~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~~ 381 (424)
-|.+|.- +.++.-+++.++.++++.+-+|+..+|-+|++++.+++|+.+|..+ .+|-.. ..-+||+.++.
T Consensus 242 pIa~dE~-~~~~~~~~~~i~~~~~d~~~~d~~~~GGit~~~~i~~~a~~~gi~v-~~h~~~----~~~~hl~aa~~ 311 (359)
T 1mdl_A 242 PVQMGEN-WLGPEEMFKALSIGACRLAMPDAMKIGGVTGWIRASALAQQFGIPM-SSHLFQ----EISAHLLAATP 311 (359)
T ss_dssp CEEECTT-CCSHHHHHHHHHTTCCSEECCBTTTTTHHHHHHHHHHHHHHTTCCB-CCBSCH----HHHHHHHHTCT
T ss_pred CCCCCCC-CCCCCCHHHHHHCCCEEEEECCHHHCCCHHHHHHHHHHHHHCCCEE-ECCCHH----HHHHHHHHHCC
T ss_conf 8217874-2113214667743855899459535498999999999999869989-658789----99999999766
No 59
>3cyj_A Mandelate racemase/muconate lactonizing enzyme- like protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=99.65 E-value=1.9e-13 Score=118.41 Aligned_cols=283 Identities=16% Similarity=0.139 Sum_probs=180.7
Q ss_pred EEEECCCC----CEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf 88607978----42999999848976766344786647754676268986516804899999998756789759885578
Q gi|254780670|r 10 EVIDSRGS----PTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAFVNDEIRTALLGCDARDQ 85 (424)
Q Consensus 10 ~IlDSRG~----PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~in~~i~~~L~g~~~~dQ 85 (424)
-+-+|+|. +.|-|++.+ +|..|.+-++.+. .+. ..+++.++|.|+|+|+.+.
T Consensus 23 P~~~~~~~~~~~~~v~v~i~~-dG~~G~GE~~~~~--------------------~~~---~~i~~~l~p~l~G~d~~~~ 78 (372)
T 3cyj_A 23 PESDGTLQWDSTTMILVEAHG-GGRKGLGYTYGDV--------------------SVG---RFVESKLAGVAEGSDALSP 78 (372)
T ss_dssp EEEETTEEEEEEEEEEEEEEE-TTEEEEEEEESCT--------------------HHH---HHHHHHTHHHHTTSBTTCH
T ss_pred CEECCCCEEEEEEEEEEEEEE-CCEEEEEEEECHH--------------------HHH---HHHHHHHHHHHCCCCCCCH
T ss_conf 862556179778999999994-8929999987878--------------------999---9999999999769996799
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEE
Q ss_conf 98886465303664322123222202448998752663498488822532456475430000036645567766102565
Q gi|254780670|r 86 LLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNILNGGIHADNALDFQEFMI 165 (424)
Q Consensus 86 ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~NiinGG~HA~~~l~iQEfmI 165 (424)
..+-+.|....-......+...|+-|+.+|++-+.++..++|||+.|++.. ..+|+.......+
T Consensus 79 ~~i~~~l~~~~~~~g~~g~~~~A~said~AlwDl~gK~~~~Pv~~LLGg~~-~~i~~y~~~~~~~--------------- 142 (372)
T 3cyj_A 79 PAVWARMQAAIRNAGRPGVGAMAVSAVDIALWDLKARLLGLPLADALPRFH-AEVPVYGSGGFTS--------------- 142 (372)
T ss_dssp HHHHHHHHHHTTTTCSSBHHHHHHHHHHHHHHHHHHHHTTCBHHHHSCCCC-SSEEEEEECCCTT---------------
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCC-CCEEEECCCCCCC---------------
T ss_conf 999999999887516752789999999999999987665997254157644-4222101356678---------------
Q ss_pred ECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC---CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCHH
Q ss_conf 148877489998999999999998752000013---67655764488684689999999999753853111023431104
Q gi|254780670|r 166 MPVGAENIREAIRMGAEVFHTLKKELKSKGYST---NVGDEGGFSPNLKTADSALDLIANSIEKAGYNAGKDLLIALDCA 242 (424)
Q Consensus 166 iP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t---~vgDEGGfap~~~~~eeaL~ll~eAi~~aGy~~g~di~i~lD~A 242 (424)
.+-.+.. ..++... ++|+.+ .+|. ..+...+.++.+.++ .|.++.|.+|+.
T Consensus 143 -----~~~~~~~-------~~~~~~~-~~Gf~~~K~k~g~------~~~~d~~~i~~ir~~-------~g~~~~l~vDaN 196 (372)
T 3cyj_A 143 -----YPLRRLQ-------EQLGGWA-AAGIPRVKMKVGR------EPEKDPERVRAAREA-------IGESVELMVDAN 196 (372)
T ss_dssp -----SCHHHHH-------HHHHHHH-HTTCCEEEEECCS------SGGGHHHHHHHHHHH-------HCTTSEEEEECT
T ss_pred -----CCHHHHH-------HHHHHHH-HHCCCCCCCCCCC------CCHHHHHHHHHHHHH-------HCCCCEEEEECC
T ss_conf -----7678999-------9999999-7266642344467------806789999999998-------298946986053
Q ss_pred HHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCEEECCHHHHHH
Q ss_conf 65320278511114686568789999999876544869977676310423799886423883685043000021488852
Q gi|254780670|r 243 ASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQLVGDDLFVTNPERLHK 322 (424)
Q Consensus 243 Asefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~IvGDDL~vTn~~rl~~ 322 (424)
..++.++-+.+...+.++|++.++|||+..+|+++.++|.++..-.+- ++.+....+....
T Consensus 197 ----------------~~~~~~~A~~~~~~~l~~~~l~~~EeP~~~~d~~~~~~l~~~~~~~i~-~~e~~~~~~~~~~-- 257 (372)
T 3cyj_A 197 ----------------GAYTRKQALYWAGAFAREAGISYLEEPVSSEDREGLRLLRDRGPGGVA-IAAGEYEWTLPQL-- 257 (372)
T ss_dssp ----------------TCSCHHHHHHHHHHHHHHHCCCEEECSSCTTCHHHHHHHHHHSCTTCE-EEECTTCCSHHHH--
T ss_pred ----------------CCCCHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCC-CCCCCCHHHHHHH--
T ss_conf ----------------445889999988654203203324689981029999999985678753-2156521445899--
Q ss_pred HHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCC
Q ss_conf 100386522342545300389999999999987986999507888723589989998199
Q gi|254780670|r 323 GINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVATNC 382 (424)
Q Consensus 323 gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~~a 382 (424)
.+..++++.+-+|+..+|-+|+++..+.+|+.+|..++. |-+ -..-++|+.++..
T Consensus 258 ~~~~~~~d~~~~d~~~~GGit~~~ki~~~a~~~gi~v~~-h~~----~~a~~hl~~a~~~ 312 (372)
T 3cyj_A 258 HDLAGCVDILQADVTRCGGITGLLRVDGICRGHQIPFSA-HCA----PAVSAHACCAVES 312 (372)
T ss_dssp HHHHTTCSEEEECTTTTTHHHHHTTHHHHHHHHTCCEEE-CSC----HHHHHHHGGGCTT
T ss_pred HHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEE-CCH----HHHHHHHHHHHHC
T ss_conf 998072300003861269878999999999985996985-679----9999999998631
No 60
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, PSI, nysgxrc; 1.80A {Agrobacterium tumefaciens str}
Probab=99.65 E-value=8.8e-14 Score=120.79 Aligned_cols=300 Identities=14% Similarity=0.163 Sum_probs=194.5
Q ss_pred CEEEEEEEEEEEECCCCC-------------------------------EEEEEEEECCCCEEEEECCCCCCCCCCEEEE
Q ss_conf 910589986886079784-------------------------------2999999848976766344786647754676
Q gi|254780670|r 1 MFINDIIAREVIDSRGSP-------------------------------TIEVDVCLEDGSTGRAMVPSGASTGIHEAFE 49 (424)
Q Consensus 1 m~I~~i~~r~IlDSRG~P-------------------------------TvEvev~~~~g~~gra~~PSGaStG~~Ea~e 49 (424)
++|++|..+.+---.-.| +|=|+|+|++|.+|.+-+.+..++
T Consensus 3 ~~I~~ve~~~~~~Pl~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlV~i~td~G~~G~GE~~~~~~~------- 75 (388)
T 2nql_A 3 SPIATVEVFTLTQPRKVPYLGALREGEVVNPNGYIVRKGNRTVYPTFDRSVLVRMTTEAGTVGWGETYGIVAP------- 75 (388)
T ss_dssp CCEEEEEEEEEEECCCSCCGGGCCSCCCCBGGGEEECTTTCCEEESSEEEEEEEEEETTCCEEEEEEECSSCH-------
T ss_pred CEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCH-------
T ss_conf 8224699999736767763255564333443210002467544465676299999978999899742688884-------
Q ss_pred ECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHCCCCH
Q ss_conf 268986516804899999998756789759885578988864653036643-2212322220244899875266349848
Q gi|254780670|r 50 LRDQEKRYFGKGVLKAIAFVNDEIRTALLGCDARDQLLIDKIMIDLDGTPN-KSRLGANAILGVSLAVSKAAAQTSNLPL 128 (424)
Q Consensus 50 lrD~~~~~~G~gV~~Av~~in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~n-ks~lGaNailAvSlA~akA~A~~~~~pL 128 (424)
......+++.++|.|+|+++.+...+-+.|...--... ...+...++-|+.+|++-+.++..++||
T Consensus 76 -------------~~~~~~i~~~l~p~liG~d~~~~~~i~~~l~~~~~~~~~~~g~~~~A~said~AlwDl~gK~~g~Pl 142 (388)
T 2nql_A 76 -------------GAVAALINDLLAGFVIGRDASDPSAVYDDLYDMMRVRGYTGGFYVDALAALDIALWDIAGQEAGKSI 142 (388)
T ss_dssp -------------HHHHHHHHHTHHHHHTTCCSSSHHHHHHHHHHHHGGGTCSSHHHHHHHHHHHHHHHHHHHHHHTSBH
T ss_pred -------------HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf -------------9999999999999967999668999999999988750666524789999999999999975526870
Q ss_pred HHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCC
Q ss_conf 882253245647543000003664556776610256514887748999899999999999875200001---36765576
Q gi|254780670|r 129 YKYLGGCSAHILPVPLMNILNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYS---TNVGDEGG 205 (424)
Q Consensus 129 y~yl~~~~~~~lP~P~~NiinGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~---t~vgDEGG 205 (424)
|+.|++... .+|+... .+ +..+..+..+.. +...++|+. ..+|..
T Consensus 143 ~~LLGg~~~-~~~~~~s-~~--------------------~~~~~~~~~~~~--------~~~~~~Gf~~~Kik~~~~-- 190 (388)
T 2nql_A 143 RDLLGGGVD-SFPAYVS-GL--------------------PERTLKARGELA--------KYWQDRGFNAFKFATPVA-- 190 (388)
T ss_dssp HHHTTCCCS-EEEEEEE-CC--------------------CCSSHHHHHHHH--------HHHHHTTCCEEEEEGGGC--
T ss_pred CCCCCCCCC-CCCCCCC-CC--------------------CCCCHHHHHHHH--------HHHHHCCCCCCCCCCCCC--
T ss_conf 001688543-1001113-46--------------------778577799999--------999974987334565566--
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECC
Q ss_conf 44886846899999999997538531110234311046532027851111468656878999999987654486997767
Q gi|254780670|r 206 FSPNLKTADSALDLIANSIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDG 285 (424)
Q Consensus 206 fap~~~~~eeaL~ll~eAi~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP 285 (424)
.....+-+..+.++ .|.++.|.+|+. ...+.++-+++...| ++|.+.++|+|
T Consensus 191 ----~~~d~~~v~~ir~~-------~g~~~~l~vDaN----------------~~~~~~~A~~~~~~l-~~~~~~~~EeP 242 (388)
T 2nql_A 191 ----DDGPAAEIANLRQV-------LGPQAKIAADMH----------------WNQTPERALELIAEM-QPFDPWFAEAP 242 (388)
T ss_dssp ----TTCHHHHHHHHHHH-------HCTTSEEEEECC----------------SCSCHHHHHHHHHHH-GGGCCSCEECC
T ss_pred ----CHHHHHHHHHHHHH-------HCCCCEEECCCC----------------CCCCHHHHHHHHHHH-CCCCCCEEECC
T ss_conf ----25899999999986-------399976974778----------------888999999999874-45795254178
Q ss_pred CCCCCHHHHHHHHHHCCCCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 63104237998864238836850430000214888521003865223425453003899999999999879869995078
Q gi|254780670|r 286 MSEDDWHGWKILTNKIGSNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRS 365 (424)
Q Consensus 286 ~~e~D~~gw~~l~~~~g~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRS 365 (424)
+..+|++++++|.++.. +-|.+|.-. ....-+++.++..+..-+.+++.- |-+|++++.+.+|+.+|..+++ |..
T Consensus 243 ~~~~d~~~~~~l~~~~~--iPIa~gE~~-~~~~~~~~~i~~~a~di~~~d~~~-GGit~~~kia~lA~~~gi~~~~-h~~ 317 (388)
T 2nql_A 243 VWTEDIAGLEKVSKNTD--VPIAVGEEW-RTHWDMRARIERCRIAIVQPEMGH-KGITNFIRIGALAAEHGIDVIP-HAT 317 (388)
T ss_dssp SCTTCHHHHHHHHTSCC--SCEEECTTC-CSHHHHHHHHTTSCCSEECCCHHH-HCHHHHHHHHHHHHHHTCEECC-CCC
T ss_pred CCHHHHHHHHHHHHCCC--CCCCCCCCC-CCHHHHHHHHHCCCCEEEECCCCC-CCHHHHHHHHHHHHHCCCEEEE-CCC
T ss_conf 88550999999986499--885257332-464567899975981587157645-8689999999999987983996-488
Q ss_pred CCCCHHHHHHHHHHHCCCHH
Q ss_conf 88723589989998199801
Q gi|254780670|r 366 GETEDHTIADLAVATNCGQI 385 (424)
Q Consensus 366 GETeD~~iaDLAVg~~a~~i 385 (424)
.++.=.+-+-+.++...+.+
T Consensus 318 ~~~~i~~aa~~h~~~~~~~~ 337 (388)
T 2nql_A 318 VGAGIFLAASLQASSTLSML 337 (388)
T ss_dssp SSCSHHHHHHHHHHTTCTTB
T ss_pred CCHHHHHHHHHHHHHHCCCC
T ss_conf 62099999999999855333
No 61
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=99.64 E-value=9.3e-13 Score=113.21 Aligned_cols=301 Identities=19% Similarity=0.210 Sum_probs=196.6
Q ss_pred CEEEEEEEEEE--------EEC-CC-----CCEEEEEEEECCCCEEEEEC-CCCCCCCCCEEEEECCCCCCCCCCHHHHH
Q ss_conf 91058998688--------607-97-----84299999984897676634-47866477546762689865168048999
Q gi|254780670|r 1 MFINDIIAREV--------IDS-RG-----SPTIEVDVCLEDGSTGRAMV-PSGASTGIHEAFELRDQEKRYFGKGVLKA 65 (424)
Q Consensus 1 m~I~~i~~r~I--------lDS-RG-----~PTvEvev~~~~g~~gra~~-PSGaStG~~Ea~elrD~~~~~~G~gV~~A 65 (424)
|+|++|....+ ..+ .| +.++=|+|+|++|..|.+-+ |.+.+.+. +-...
T Consensus 3 mkI~~i~~~~~~~Pl~~p~~~~s~~~~~~~~~~~lv~i~td~G~~G~GE~~~~~~~~~~----------------~~~~~ 66 (386)
T 3fv9_G 3 LKITRIDIHRTDLPVRGGVYRLSGGREYHSYDATIVSIETDTGLTGWGESTPFGSTYIA----------------AHAGG 66 (386)
T ss_dssp CCEEEEEEEEEEEEBSSSCEEETTTEEESEEEEEEEEEEETTSCEEEEEECCSTTSSSS----------------CCHHH
T ss_pred CEEEEEEEEEEECCCCCCCEEEECCEEEEEEEEEEEEEEECCCCEEEEECCCCCCCCCC----------------CHHHH
T ss_conf 38638999999514688854740876998878899999989999999842578887652----------------03999
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCE
Q ss_conf 99998756789759885578988864653036643221232222024489987526634984888225324564754300
Q gi|254780670|r 66 IAFVNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLM 145 (424)
Q Consensus 66 v~~in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~ 145 (424)
+..+.+.+.|.|+|+++.+...|-+.+.+.-. ....+.-|+.+|++-+.++..++|||+.|++.....+| ..
T Consensus 67 ~~~~~~~l~~~lig~~~~~~~~i~~~~~~~~~------~~~~a~said~AlwDl~~K~~~~pl~~LLG~~~~~~i~--~~ 138 (386)
T 3fv9_G 67 TRAALELLAPAILGMDPRQHDRIWDRMRDTLK------GHRDARAALDIACWDIAAQAAGLPLCDMTGGRVAGPVP--VI 138 (386)
T ss_dssp HHHHHHHHHHHHTTSCTTCHHHHHHHHHHHCS------SCHHHHHHHHHHHHHHHHHHHTCBHHHHTTCCCSSCBC--EE
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC------CCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEC--CC
T ss_conf 99999999998759984778999999876401------24789999999999999877499614404875442000--10
Q ss_pred EECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC---CCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 00036645567766102565148877489998999999999998752000013---676557644886846899999999
Q gi|254780670|r 146 NILNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYST---NVGDEGGFSPNLKTADSALDLIAN 222 (424)
Q Consensus 146 NiinGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t---~vgDEGGfap~~~~~eeaL~ll~e 222 (424)
..+.+ .+..+..+. +.+. .++|+.+ .+|. ...-.+.+.-++.+..
T Consensus 139 ~~~~~--------------------~~~~~~~~~-------~~~~-~~~g~~~~K~k~g~----~~~~~~~~~d~~~i~~ 186 (386)
T 3fv9_G 139 SSIGG--------------------DTPEAMRAK-------VARH-RAQGFKGHSIKIGA----SEAEGGPALDAERITA 186 (386)
T ss_dssp EEECS--------------------CCHHHHHHH-------HHHH-HHTTCCEEEEECCC----CTTTTHHHHHHHHHHH
T ss_pred CCCCC--------------------CCHHHHHHH-------HHHH-HHCCCEEEEECCCC----CCCCCCHHHHHHHHHH
T ss_conf 13466--------------------999999999-------9976-50364145321478----7645660667999999
Q ss_pred HHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCC
Q ss_conf 99753853111023431104653202785111146865687899999998765448699776763104237998864238
Q gi|254780670|r 223 SIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIG 302 (424)
Q Consensus 223 Ai~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g 302 (424)
+.+ ..|.++.|.+|+ +..++.++-+.+.. .+++|++..+|+|+ +||++.+.+..+.+
T Consensus 187 ir~----~~g~~~~l~vDa----------------N~~~~~~~A~~~~~-~l~~~~i~~~EeP~--~~~~~~~~l~~~~~ 243 (386)
T 3fv9_G 187 CLA----DRQPGEWYLADA----------------NNGLTVEHALRMLS-LLPPGLDIVLEAPC--ASWAETKSLRARCA 243 (386)
T ss_dssp HTT----TCCTTCEEEEEC----------------TTCCCHHHHHHHHH-HSCSSCCCEEECCC--SSHHHHHHHHTTCC
T ss_pred HHH----HHCCCCEEEEEC----------------CCCCCHHHHHHHHH-HHHHCCCCEEECCC--CCCCCCCCCCCCCC
T ss_conf 898----738885264442----------------46635899999998-64505853780664--20123321023557
Q ss_pred CCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCH--HHHHHHHHHH
Q ss_conf 83685043000021488852100386522342545300389999999999987986999507888723--5899899981
Q gi|254780670|r 303 SNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETED--HTIADLAVAT 380 (424)
Q Consensus 303 ~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD--~~iaDLAVg~ 380 (424)
+-|.+|.- +.++.-+.+.++.++++.+.+||..+|.+|++++.+++|+.+|+.+++++-. |+.= ...+|||.++
T Consensus 244 --ipIa~dE~-~~~~~~~~~~i~~~~~d~v~~~~~~~GGit~~~~i~~~A~~~gi~~~~~~~~-~s~i~~aa~~hlaaa~ 319 (386)
T 3fv9_G 244 --LPLLLDEL-IQTETDLIAAIRDDLCDGVGLKVSKQGGITPMLRQRAIAAAAGMVMSVQDTV-GSQISFAAILHLAQST 319 (386)
T ss_dssp --SCEEESTT-CCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCEEEEECSS-CCHHHHHHHHHHHHTS
T ss_pred --CCCCCCCC-EEHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCC-CCHHHHHHHHHHHHHC
T ss_conf --86305740-0004669999984675210306656785699999999999859969978988-5499999999999968
Q ss_pred CCCH
Q ss_conf 9980
Q gi|254780670|r 381 NCGQ 384 (424)
Q Consensus 381 ~a~~ 384 (424)
....
T Consensus 320 ~~~~ 323 (386)
T 3fv9_G 320 PRHL 323 (386)
T ss_dssp CTTT
T ss_pred CCCC
T ss_conf 9975
No 62
>3n6h_A Mandelate racemase/muconate lactonizing protein; structural genomics, protein structure initiative; 2.30A {Actinobacillus succinogenes} PDB: 3n6j_A
Probab=99.64 E-value=7.8e-15 Score=128.57 Aligned_cols=315 Identities=17% Similarity=0.125 Sum_probs=191.4
Q ss_pred EEEEEEEEEE--EECC-----C--CCE---EEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH
Q ss_conf 1058998688--6079-----7--842---99999984897676634478664775467626898651680489999999
Q gi|254780670|r 2 FINDIIAREV--IDSR-----G--SPT---IEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAFV 69 (424)
Q Consensus 2 ~I~~i~~r~I--lDSR-----G--~PT---vEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~i 69 (424)
+||+|...-| -||. | .|= .=|+|+|++|.+|.+-+|.+ ..+..+++
T Consensus 10 ~i~~~~~~~~~~~~~~~~~~~g~h~~~~~rtiV~V~Td~Gi~G~GEa~~~--------------------~~~~~~l~-- 67 (455)
T 3n6h_A 10 VITDMKVIPVAGHDSMLMNVGGAHSPYFTRNIVILTDNSGHTGVGEAPGG--------------------ATIENALT-- 67 (455)
T ss_dssp BEEEEEEEEEEEECCCEEETTEECCSEEEEEEEEEEETTSCEEEEEEECS--------------------HHHHHHHH--
T ss_pred EEEEEEEEEEECCCCHHCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCC--------------------HHHHHHHH--
T ss_conf 57889999851578220146676667532169999989999899965796--------------------89999999--
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCC---------CCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCC
Q ss_conf 875678975988557898886465303664322123---------22220244899875266349848882253245647
Q gi|254780670|r 70 NDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLG---------ANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHIL 140 (424)
Q Consensus 70 n~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lG---------aNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~l 140 (424)
.+.|.|+|+++.+.+.+.+.|.......+...+| ..|+-|+-+|++-+.++..++|||+.|++- ..+-
T Consensus 68 --~~~p~LiG~d~~~~e~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~A~saIDiALWDl~GK~~g~Pv~~LLGgg-~~r~ 144 (455)
T 3n6h_A 68 --EAIPHVVGRPISILNKIVNDMHNGYLDADYDTFGKGAWTFELRVNAVAALEAALLDLMGQFLGVPVAELLGPG-KQRD 144 (455)
T ss_dssp --HHGGGTTTCBGGGHHHHHHHHTC-------------CCHHHHHHHHHHHHHHHHHHHHHHHHTSBGGGTSTTC-CCCS
T ss_pred --HHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCC-CCCC
T ss_conf --9999975998789999999999753136720003554444306889999999999999988499599995799-8773
Q ss_pred CCCCEEECCC-CCCCCCCCCCEEEEEECCCCCCHHHHHHH----HHHHHHHHHHHHHHCCCCC---CCCCCCCCCCCCCC
Q ss_conf 5430000036-64556776610256514887748999899----9999999998752000013---67655764488684
Q gi|254780670|r 141 PVPLMNILNG-GIHADNALDFQEFMIMPVGAENIREAIRM----GAEVFHTLKKELKSKGYST---NVGDEGGFSPNLKT 212 (424)
Q Consensus 141 P~P~~NiinG-G~HA~~~l~iQEfmIiP~g~~sf~eal~~----~~ev~~~lk~~L~~~g~~t---~vgDEGGfap~~~~ 212 (424)
++|+...+.. +......+.. ...+.+...+.+.... .-+......+...+.|+.. .+|. .+
T Consensus 145 ~v~~y~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~KiKvG~--------~~ 213 (455)
T 3n6h_A 145 EVTVLGYLFYVGDDKITDLPY---QQPVTGKHEWYDIRRKKAMDTQAVIELAAASKDRYGFKDFKLKGGV--------FE 213 (455)
T ss_dssp EEEBCEEECEECCGGGSCSCC---CCCCCSSCHHHHHTTSCBCSHHHHHHHHHHHHHHHCCSEEEEECSS--------SC
T ss_pred EEEEEEEECCCCCCCCCCHHH---HHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCC--------CC
T ss_conf 688988850258765432033---3310221125555432047879999999999986499779995798--------88
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHH
Q ss_conf 68999999999975385311102343110465320278511114686568789999999876544869977676310423
Q gi|254780670|r 213 ADSALDLIANSIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWH 292 (424)
Q Consensus 213 ~eeaL~ll~eAi~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~ 292 (424)
.++-++.+ +++.++. + |+.|.+|+- ...+.++-+.+...| ++| +.++|+|+..+|+.
T Consensus 214 ~~~di~~v-~avr~~~--~--d~~l~vDaN----------------~~~~~~~Ai~~~~~L-e~~-~~w~EEP~~~~d~~ 270 (455)
T 3n6h_A 214 GSKEIDTV-IELKKHF--P--DARITLDPN----------------GCWSLDEAIQLCKGL-NDV-LTYAEDPCIGENGY 270 (455)
T ss_dssp HHHHHHHH-HHHHHHC--T--TSEEEEECT----------------TBSCHHHHHHHTTTC-TTT-CSEEESCBCCBTTB
T ss_pred HHHHHHHH-HHHHHHC--C--CCEEEEECC----------------CCCCHHHHHHHHHHH-HCC-CCEEECCCCCCCCH
T ss_conf 69999999-9999868--9--966998168----------------765899999999998-506-10898068854520
Q ss_pred HHH----HHHHHCCCCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCC
Q ss_conf 799----8864238836850430000214888521003865223425453003899999999999879869995078887
Q gi|254780670|r 293 GWK----ILTNKIGSNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGET 368 (424)
Q Consensus 293 gw~----~l~~~~g~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGET 368 (424)
+.. ++....+ +-|.+|. .+.+...+.+.++.+++..++.+ .+.|.+|+++..+.+|+.+|..+++ |...++
T Consensus 271 ~~~~~l~~l~~~~~--iPIa~gE-~~~~~~~~~~~i~~~a~dii~~d-~~~GGit~~~kia~lA~~~gv~v~~-h~~~~s 345 (455)
T 3n6h_A 271 SGREIMAEFRRRTG--IPTATNM-IATNWREMCHAIMLQSVDIPLAD-PHFWTLTGASRVAQLCNEWGLTWGC-HSNNHF 345 (455)
T ss_dssp CHHHHHHHHHHHHC--CCEEESS-SCSSHHHHHHHHHHTCCSEEBCC-HHHHCHHHHHHHHHHHHHTTCCCBC-CCCSCC
T ss_pred HHHHHHHHHHHCCC--CEEEECC-CEEEHHHHHHHHHCCCCCEEEEC-CCCCCHHHHHHHHHHHHHCCCEEEE-CCCCCC
T ss_conf 13689999985489--4286045-20101337877644456589856-1213569999999999986996997-689765
Q ss_pred CHHHHH--HHHHHH
Q ss_conf 235899--899981
Q gi|254780670|r 369 EDHTIA--DLAVAT 380 (424)
Q Consensus 369 eD~~ia--DLAVg~ 380 (424)
.=.+.+ |++.++
T Consensus 346 ~i~~aa~~hlaaa~ 359 (455)
T 3n6h_A 346 DISLAMFSHVGAAA 359 (455)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHC
T ss_conf 99999999999968
No 63
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding protein; 1.95A {Thermus thermophilus HB8}
Probab=99.62 E-value=1.3e-12 Score=112.09 Aligned_cols=292 Identities=19% Similarity=0.226 Sum_probs=193.9
Q ss_pred CEEEEEEEEEE--------EECCCC----CEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHH
Q ss_conf 91058998688--------607978----429999998489767663447866477546762689865168048999999
Q gi|254780670|r 1 MFINDIIAREV--------IDSRGS----PTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAF 68 (424)
Q Consensus 1 m~I~~i~~r~I--------lDSRG~----PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~ 68 (424)
|+|++|..+.+ -.|+|. +.+-|+|+ ++|..|.+-+.... .+.|.+..+..+...
T Consensus 1 MKI~~i~~~~~~~Pl~~p~~~s~g~~~~r~~~~v~i~-~dG~~G~GE~~~~~-------------~p~~~~e~~~~~~~~ 66 (369)
T 2zc8_A 1 MRIEAAELRILELPLKFRFETSFGVQTKRTILLLRLF-GEGLEGLGEGVMER-------------LPLYREETVAGARYL 66 (369)
T ss_dssp CBCCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEE-ETTEEEEEECCCBS-------------SCSSSSCBHHHHHHH
T ss_pred CEEEEEEEEEEEEECCCCEECCCEEEEEEEEEEEEEE-ECCCEEEEEEECCC-------------CCCCCCCCHHHHHHH
T ss_conf 9899999999984158877877879999899999999-79949997311678-------------886470309999999
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEEC
Q ss_conf 98756789759885578988864653036643221232222024489987526634984888225324564754300000
Q gi|254780670|r 69 VNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNIL 148 (424)
Q Consensus 69 in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~Nii 148 (424)
+++.+.|.++|+++.+...+-+.|..+- ....+.-|+.+|.+-+.++..++|+|+.|++.. ..+|+.....+
T Consensus 67 l~~~~~~~~ig~d~~~~e~~~~~l~~~~-------~~~~a~said~AlwDl~gK~~~~pv~~llG~~~-~~i~~~~s~~~ 138 (369)
T 2zc8_A 67 LEEVFLPRVLGRDLPNPEALREALAPFR-------GNPMAKAVLEMAFFDLWAKALGRPLWQVLGGVR-QAVEVGVSLGI 138 (369)
T ss_dssp HHHTHHHHHTTCBCSSHHHHHHHHTTSC-------SCHHHHHHHHHHHHHHHHHHTTSBHHHHHTCCC-SEEEBCEEECC
T ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHHCC-------CCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCC-CCEEEEEEECC
T ss_conf 9998778871888442899999975324-------467899999999999853204998210048865-52256776214
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 36645567766102565148877489998999999999998752000013676557644886846899999999997538
Q gi|254780670|r 149 NGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYSTNVGDEGGFSPNLKTADSALDLIANSIEKAG 228 (424)
Q Consensus 149 nGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t~vgDEGGfap~~~~~eeaL~ll~eAi~~aG 228 (424)
..+..+.++.. .+.. .+|+.+-...-| |.. ..+.+..+.+++
T Consensus 139 ---------------------~~~~~~~~~~~-------~~~~-~~g~~~~k~k~g---~~~--d~~~~~~ir~~~---- 180 (369)
T 2zc8_A 139 ---------------------QPSVEDTLRVV-------ERHL-EEGYRRIKLKIK---PGW--DYEVLKAVREAF---- 180 (369)
T ss_dssp ---------------------CSSHHHHHHHH-------HHHH-HTTCSCEEEECB---TTB--SHHHHHHHHHHC----
T ss_pred ---------------------CCCHHHHHHHH-------HHHH-HCCCCEECCCCC---CCC--HHHHHHHHHHHC----
T ss_conf ---------------------64157899999-------9998-739630114689---620--588999999868----
Q ss_pred CCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEE
Q ss_conf 53111023431104653202785111146865687899999998765448699776763104237998864238836850
Q gi|254780670|r 229 YNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQLV 308 (424)
Q Consensus 229 y~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~Iv 308 (424)
+ |..+.+|+ ++.| +.++.+ .+.. +++|++.++|+|+..+|++++.++.+..+ +-|.
T Consensus 181 --~--d~~l~vDa-------N~~~---------~~~~a~-~~~~-~~~~~i~~~EeP~~~~~~~~~~~l~~~~~--ipia 236 (369)
T 2zc8_A 181 --P--EATLTADA-------NSAY---------SLANLA-QLKR-LDELRLDYIEQPLAYDDLLDHAKLQRELS--TPIC 236 (369)
T ss_dssp --T--TSCEEEEC-------TTCC---------CGGGHH-HHHG-GGGGCCSCEECCSCTTCSHHHHHHHHHCS--SCEE
T ss_pred --C--CCEEEEEC-------CCCC---------CHHHHH-HHHH-HHHCCCEEEEECCCCCCHHHHHHHHHCCC--CCCC
T ss_conf --9--95077416-------7567---------688888-8765-65338626873257002577787875368--6600
Q ss_pred CCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHH--HHHHHH
Q ss_conf 4300002148885210038652234254530038999999999998798699950788872358--998999
Q gi|254780670|r 309 GDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHT--IADLAV 378 (424)
Q Consensus 309 GDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~--iaDLAV 378 (424)
.|.- +++..-+.+.++.++++.+.+||..+|-+|+++..+.+|+.+|..+++++-. |+.=.. .+|||-
T Consensus 237 ~dE~-~~~~~~~~~~~~~~~~div~~d~~~~GGit~~~~i~~~A~~~gi~~~~~~~~-~s~i~~~a~~hla~ 306 (369)
T 2zc8_A 237 LDES-LTGAEKARKAIELGAGRVFNVKPARLGGHGESLRVHALAESAGIPLWMGGML-EAGVGRAHNLHLAT 306 (369)
T ss_dssp ESTT-CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEECCCC-CCHHHHHHHHHHTT
T ss_pred CCCC-CCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC-CCHHHHHHHHHHHH
T ss_conf 7864-5576676668871963699956755777799999999999879995558886-66999999999997
No 64
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/enolase superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=99.61 E-value=9.7e-15 Score=127.89 Aligned_cols=307 Identities=16% Similarity=0.142 Sum_probs=194.7
Q ss_pred CEEEEEEEEEEEE-------CCCCCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 9105899868860-------797842999999848976766344786647754676268986516804899999998756
Q gi|254780670|r 1 MFINDIIAREVID-------SRGSPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAFVNDEI 73 (424)
Q Consensus 1 m~I~~i~~r~IlD-------SRG~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~in~~i 73 (424)
|+|++|....+-- ....++|=|.|++ +|.+|.+-+.. +.+..-+-|..+ .+..+.+.+
T Consensus 3 MKI~~I~~~~~~~P~~~~~~~~s~~~vlV~v~~-dG~~G~GE~~~--~~~~~~~~~~~~------------~~~~~~~~l 67 (401)
T 2hzg_A 3 LKIDAVDLFYLSMPEVTDAADGSQDALLVRVAA-GGHIGWGECEA--APLPSIAAFVCP------------KSHGVCRPV 67 (401)
T ss_dssp CBEEEEEEEEEECSSCCSSSCGGGEEEEEEEEE-TTEEEEEEECS--CHHHHHHHHHCC------------CSBTTBCCG
T ss_pred CEEEEEEEEEECCCCCCCCCCCEEEEEEEEEEE-CCCEEEEEECC--CCCCCCCHHHHH------------HHHHHHHHH
T ss_conf 777799999964787547712607999999997-99689975137--877652253599------------999999999
Q ss_pred HHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCC--CCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEECCCC
Q ss_conf 789759885578988864653036643221232--222024489987526634984888225324564754300000366
Q gi|254780670|r 74 RTALLGCDARDQLLIDKIMIDLDGTPNKSRLGA--NAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNILNGG 151 (424)
Q Consensus 74 ~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGa--NailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~NiinGG 151 (424)
+|.|+|+++.+...|.+.+....-.. ...|. .++-|+.+|++-+.++..++|||+.|++.....+|+ ..++..+
T Consensus 68 ~~~liG~~~~~~~~i~~~~~~~~~~~--~~~~~~~~a~sAid~AlwDl~gK~~~~Pl~~llgg~~~~~i~~-~~~~~~~- 143 (401)
T 2hzg_A 68 SDSVLGQRLDGPDDIARIAALVGYNS--MDLLQAPHMLSGIEMALWDLLGRRLSAPAWALLGYSASHGKRP-YASLLFG- 143 (401)
T ss_dssp GGGTTTCBCSSHHHHHHHHHHHHHHT--TTCTTHHHHHHHHHHHHHHHHHHHHTCBHHHHTTCSCCCCBEE-EEEEECC-
T ss_pred HHHHCCCCCCCHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEE-EEECCCC-
T ss_conf 99972999899999999999975421--4432067899999999999999986787435327776870467-7631468-
Q ss_pred CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 4556776610256514887748999899999999999875200001---3676557644886846899999999997538
Q gi|254780670|r 152 IHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYS---TNVGDEGGFSPNLKTADSALDLIANSIEKAG 228 (424)
Q Consensus 152 ~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~---t~vgDEGGfap~~~~~eeaL~ll~eAi~~aG 228 (424)
.+-.+..+ ..++. .++|+. ..++..|. .+.++-++.+...-+..
T Consensus 144 -------------------~~~~~~~~-------~~~~~-~~~Gf~~~Kik~~~~g~-----~~~~~di~~i~~vr~~~- 190 (401)
T 2hzg_A 144 -------------------DTPQETLE-------RARAA-RRDGFAAVKFGWGPIGR-----GTVAADADQIMAAREGL- 190 (401)
T ss_dssp -------------------SSHHHHHH-------HHHHH-HHTTCSEEEEESTTTTS-----SCHHHHHHHHHHHHHHH-
T ss_pred -------------------CCHHHHHH-------HHHHH-HHCCCCCEECCCCCCCC-----CCHHHHHHHHHHHHHHH-
T ss_conf -------------------99899999-------99999-86376530001235788-----77899999999999983-
Q ss_pred CCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEE
Q ss_conf 53111023431104653202785111146865687899999998765448699776763104237998864238836850
Q gi|254780670|r 229 YNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQLV 308 (424)
Q Consensus 229 y~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~Iv 308 (424)
|.++.|.+|+ ++.|. .+.++.+.+... +++|+|.++|+|+..+|+++..+|.++. ..+-|.
T Consensus 191 ---g~~~~l~vDa-------N~~~~-------~~~~~a~~~~~~-l~~~~i~~iEeP~~~~d~~~~~~l~~~~-~~ipia 251 (401)
T 2hzg_A 191 ---GPDGDLMVDV-------GQIFG-------EDVEAAAARLPT-LDAAGVLWLEEPFDAGALAAHAALAGRG-ARVRIA 251 (401)
T ss_dssp ---CSSSEEEEEC-------TTTTT-------TCHHHHHTTHHH-HHHTTCSEEECCSCTTCHHHHHHHHTTC-CSSEEE
T ss_pred ---CCCCCHHHHC-------CCCCC-------HHHHHHHHHHHH-HHHCCCCCCCCCCCHHHHHHHHHHHHHC-CCCCCC
T ss_conf ---7333366627-------63310-------328999999999-8512876578998823456777877403-567753
Q ss_pred CCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHC
Q ss_conf 4300002148885210038652234254530038999999999998798699950788872358998999819
Q gi|254780670|r 309 GDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVATN 381 (424)
Q Consensus 309 GDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~~ 381 (424)
.|. .+.++.-+++.++.++++-+-+|+..+|-+|++++.+.+|+.+|+.+ +.|-.+. .=.+.+.+.++..
T Consensus 252 ~dE-~~~~~~~~~~~i~~~~~d~i~~d~~~~GGit~~~~i~~~A~~~gi~v-~~h~~~~-~i~~aa~~h~~a~ 321 (401)
T 2hzg_A 252 GGE-AAHNFHMAQHLMDYGRIGFIQIDCGRIGGLGPAKRVADAAQARGITY-VNHTFTS-HLALSASLQPFAG 321 (401)
T ss_dssp ECT-TCSSHHHHHHHHHHSCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEE-EECCCSC-HHHHHHHHGGGTT
T ss_pred CCC-CEEEHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEE-EECCCCC-HHHHHHHHHHHHH
T ss_conf 883-02324358999972887689959364799889999999999879979-9778873-8999999999985
No 65
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structure initiative, nysgrc; 2.30A {Roseovarius nubinhibens ism} PDB: 3fvd_B
Probab=99.61 E-value=1.3e-12 Score=112.20 Aligned_cols=291 Identities=18% Similarity=0.199 Sum_probs=190.2
Q ss_pred CEEEEEEEEEE--------EECCCC------CEEEEEEEECCCCEEEEEC-CCCCCCCCCEEEEECCCCCCCCCCHHHHH
Q ss_conf 91058998688--------607978------4299999984897676634-47866477546762689865168048999
Q gi|254780670|r 1 MFINDIIAREV--------IDSRGS------PTIEVDVCLEDGSTGRAMV-PSGASTGIHEAFELRDQEKRYFGKGVLKA 65 (424)
Q Consensus 1 m~I~~i~~r~I--------lDSRG~------PTvEvev~~~~g~~gra~~-PSGaStG~~Ea~elrD~~~~~~G~gV~~A 65 (424)
|+|++|..+.+ ..|.|. .++-|+|.+++|..|.+-+ |.+-+++. .....
T Consensus 3 MKI~~i~~~~~~~pl~~p~~~s~~~~~~~~~~~~lV~i~td~G~~G~GE~~~~~~~~~~----------------~~~~~ 66 (378)
T 2qdd_A 3 LRITRLTVFHLDLPLAKPYWLSGGRLKFDRLDSTYLRIDTDEGVTGWGEGCPWGHSYLP----------------AHGPG 66 (378)
T ss_dssp CCEEEEEEEEEEEEEEEEEECCC--CEEEEEEEEEEEEEETTSCEEEEEECCSTTTSSS----------------CCHHH
T ss_pred CEEEEEEEEEEEEECCCCEEECCCEEEEEEEEEEEEEEEECCCCEEEEEECCCCCCCCC----------------CCHHH
T ss_conf 78969999999973578657138648865678999999989999899840478776642----------------30899
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCE
Q ss_conf 99998756789759885578988864653036643221232222024489987526634984888225324564754300
Q gi|254780670|r 66 IAFVNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLM 145 (424)
Q Consensus 66 v~~in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~ 145 (424)
+..+-+.+.|.|+|+++.+...+.+.|...-. ...-++-|+.+|++-+.++..++|||+.|++..... +|..
T Consensus 67 ~~~~~~~l~~~l~g~~~~~~~~~~~~~~~~~~------~~~~a~said~AlwDl~gK~~~~pv~~llGg~~~~~--i~~~ 138 (378)
T 2qdd_A 67 LRAGIATLAPHLLGLDPRSLDHVNRVMDLQLP------GHSYVKSPIDMACWDILGQVAGLPLWQLLGGEAATP--VPIN 138 (378)
T ss_dssp HHHHHHHHHHHHTTCCTTCHHHHHHHHHHHSC------SCHHHHHHHHHHHHHHHHHHHTCBHHHHTTCSSCCC--EEBE
T ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC------CHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCC--EEEE
T ss_conf 99999999998669993049999999986465------407899999999999999973996202137776641--0255
Q ss_pred EECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC---CCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 00036645567766102565148877489998999999999998752000013---676557644886846899999999
Q gi|254780670|r 146 NILNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYST---NVGDEGGFSPNLKTADSALDLIAN 222 (424)
Q Consensus 146 NiinGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t---~vgDEGGfap~~~~~eeaL~ll~e 222 (424)
..+.+ .+..+.+.. ..+.+ ++|+.+ .+|. .+.++-++.+..
T Consensus 139 ~~~~~--------------------~~~~~~~~~-------~~~~~-~~G~~~~K~kvg~--------~~~~~d~~~v~~ 182 (378)
T 2qdd_A 139 SSIST--------------------GTPDQMLGL-------IAEAA-AQGYRTHSAKIGG--------SDPAQDIARIEA 182 (378)
T ss_dssp EEECS--------------------CCHHHHHHH-------HHHHH-HHTCCEEEEECCS--------SCHHHHHHHHHH
T ss_pred ECCCC--------------------CCHHHHHHH-------HHHHH-HCCCCEECCCCCC--------CCHHHHHHHHHH
T ss_conf 13457--------------------987888888-------88876-3476210356799--------998999999999
Q ss_pred HHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCC
Q ss_conf 99753853111023431104653202785111146865687899999998765448699776763104237998864238
Q gi|254780670|r 223 SIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIG 302 (424)
Q Consensus 223 Ai~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g 302 (424)
.-+. .|.++.|.+|+- ...|.++-+++...| ++|- +||+|+..+|+.+.. ..+.+
T Consensus 183 ir~~----~g~~~~l~vDaN----------------~~w~~~~A~~~~~~l-~~~~--~iEeP~~~~d~~~~~--~~~~~ 237 (378)
T 2qdd_A 183 ISAG----LPDGHRVTFDVN----------------RAWTPAIAVEVLNSV-RARD--WIEQPCQTLDQCAHV--ARRVA 237 (378)
T ss_dssp HHHS----CCTTCEEEEECT----------------TCCCHHHHHHHHTSC-CCCC--EEECCSSSHHHHHHH--HTTCC
T ss_pred HHHH----CCCCCEEEECCC----------------CCCCHHHHHHHHHHH-HHCC--CCCCCCCCHHHHHHH--HHHCC
T ss_conf 8764----698775871267----------------779999999999987-5137--733663202467788--88518
Q ss_pred CCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHH--HHHHHH
Q ss_conf 836850430000214888521003865223425453003899999999999879869995078887235899--899981
Q gi|254780670|r 303 SNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIA--DLAVAT 380 (424)
Q Consensus 303 ~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~ia--DLAVg~ 380 (424)
+-|..|.- +.+..-.+..++.++++.+.+|+.-+|-+|++++.+++|+.+|+.+++. ..+|+.=...+ |||.++
T Consensus 238 --~pia~~E~-~~~~~~~~~~~~~~a~d~~~~d~~~~GGit~~~~i~~~a~~~g~~~~~~-~~~~~~i~~~a~~hlaaa~ 313 (378)
T 2qdd_A 238 --NPIMLDEC-LHEFSDHLAAWSRGACEGVKIKPNRVGGLTRARQIRDFGVSVGWQMHIE-DVGGTALADTAALHLAAST 313 (378)
T ss_dssp --SCEEECTT-CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEEC-CSSCCHHHHHHHHHHHHTS
T ss_pred --CCCCCCCC-CCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCC-CCCCHHHHHHHHHHHHHHC
T ss_conf --99667875-4423455668765974799825756774999999999999856472158-8764099999999999968
No 66
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiative; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=99.60 E-value=8e-14 Score=121.11 Aligned_cols=275 Identities=18% Similarity=0.195 Sum_probs=179.1
Q ss_pred CCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
Q ss_conf 84299999984897676634478664775467626898651680489999999875678975988557898886465303
Q gi|254780670|r 17 SPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAFVNDEIRTALLGCDARDQLLIDKIMIDLD 96 (424)
Q Consensus 17 ~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~in~~i~~~L~g~~~~dQ~~iD~~Li~lD 96 (424)
.++|=|+|.|++|.+|-+-++.| ..+...|++.++|.|+|+|+.|...|=+.|....
T Consensus 69 ~~~v~VeIetddG~~G~Ge~~~g-----------------------~~~~~~i~~~l~~~liG~dp~die~i~~~m~~~~ 125 (415)
T 2p3z_A 69 LGTLIVEVEAENRQTGFAVSTAG-----------------------EMGCFIVEKHLNRFIEGKCVSDIKLIHDQMLGAT 125 (415)
T ss_dssp SCEEEEEEEETTSCEEEEEEECH-----------------------HHHHHHHHHTTHHHHTTSBTTCHHHHHHHHHHHH
T ss_pred CCEEEEEEEECCCCEEEEECCCC-----------------------HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
T ss_conf 86799999989999899973781-----------------------7799999999999976999757899999999840
Q ss_pred CCC-CCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCHHH
Q ss_conf 664-3221232222024489987526634984888225324564754300000366455677661025651488774899
Q gi|254780670|r 97 GTP-NKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNILNGGIHADNALDFQEFMIMPVGAENIRE 175 (424)
Q Consensus 97 gT~-nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~NiinGG~HA~~~l~iQEfmIiP~g~~sf~e 175 (424)
--. ....+..+++-|+-+|++-+.++..++|||+.|++.....+|+-.. + .....
T Consensus 126 ~~~~g~~g~~~~A~sAIDiALWDl~gK~~g~Pv~~LLGG~~r~~i~~ya~----~--------------------~~~~~ 181 (415)
T 2p3z_A 126 MYYSGSGGLVMNTISCVDLALWDLFGKVVGLPVYKLLGGAVRDEIQFYAT----G--------------------ARPDL 181 (415)
T ss_dssp TTTSTTSSHHHHHHHHHHHHHHHHHHHHHTCBHHHHTTCCSSSEEEEEEE----S--------------------SCHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHC----C--------------------CCCCH
T ss_conf 12467732899999999999999999882998899749976774451011----3--------------------45107
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEE
Q ss_conf 9899999999999875200001367655764488-684689999999999753853111023431104653202785111
Q gi|254780670|r 176 AIRMGAEVFHTLKKELKSKGYSTNVGDEGGFSPN-LKTADSALDLIANSIEKAGYNAGKDLLIALDCAASAFFKKEKYIL 254 (424)
Q Consensus 176 al~~~~ev~~~lk~~L~~~g~~t~vgDEGGfap~-~~~~eeaL~ll~eAi~~aGy~~g~di~i~lD~AAsefy~~~kY~~ 254 (424)
+.+ .|+....-..|..... -...++-++.+...-+. .|.|+.|.+||-
T Consensus 182 ~~~---------------~g~~a~K~~~~~~~~~~~~~~~~die~v~~vR~~----vG~d~~L~vDan------------ 230 (415)
T 2p3z_A 182 AKE---------------MGFIGGKMPTHWGPHDGDAGIRKDAAMVADMREK----CGPDFWLMLDCW------------ 230 (415)
T ss_dssp HHH---------------HTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHH----HCSSSEEEEECT------------
T ss_pred HHH---------------HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----CCCCCEEEECCC------------
T ss_conf 999---------------6366403566667655665799999999999986----498754886255------------
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCEEECCHHHHHHHHHCCCCCEEEE
Q ss_conf 14686568789999999876544869977676310423799886423883685043000021488852100386522342
Q gi|254780670|r 255 KGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQLVGDDLFVTNPERLHKGINEEVANAILI 334 (424)
Q Consensus 255 ~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~IvGDDL~vTn~~rl~~gi~~~~~Naili 334 (424)
.-++.++-+.+... +++|.+..+|+|+..+|++++++|.++....+.+-++..+ +.....+. +.+++++-+-+
T Consensus 231 ----~~~~~~~Ai~~~~~-L~~~~l~wiEeP~~~~d~~~~~~Lr~~~~~pI~ia~~e~~-~~~~~~~~-l~~~avDivq~ 303 (415)
T 2p3z_A 231 ----MSQDVNYATKLAHA-CAPFNLKWIEECLPPQQYEGYRELKRNAPAGMMVTSGEHH-GTLQSFRT-LAETGIDIMQP 303 (415)
T ss_dssp ----TCCCHHHHHHHHHH-HGGGTCCEEECCSCTTCHHHHHHHHHHSCTTCEEEECTTC-CSHHHHHH-HHHTTCSEECC
T ss_pred ----CCCCHHHHHHHHHH-HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCC-CCHHHHHH-HHHHCCCEECC
T ss_conf ----45778999987646-5431132125999714078899998735751475245534-40777788-78616888724
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHC
Q ss_conf 54530038999999999998798699950788872358998999819
Q gi|254780670|r 335 KPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVATN 381 (424)
Q Consensus 335 K~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~~ 381 (424)
|+..+|-+|+++..+.+|..+|..++ .|-++ ...++++.+..
T Consensus 304 Dv~~~GGIt~~~kia~lA~a~gi~v~-pHg~~----~~~~h~~~a~~ 345 (415)
T 2p3z_A 304 DVGWCGGLTTLVEIAALAKSRGQLVV-PHGSS----VYSHHAVITFT 345 (415)
T ss_dssp CHHHHTCHHHHHHHHHHHHHTTCCBC-CCCCH----HHHHHHHTTCT
T ss_pred CCCEECCHHHHHHHHHHHHHCCCEEE-EECCH----HHHHHHHHHHH
T ss_conf 76632757999999999998498499-86739----99999999987
No 67
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, putative; enolase, structural genomics, PSI, protein structure initiative, nysgrc; 2.00A {Roseovarius nubinhibens ism}
Probab=99.58 E-value=3.7e-12 Score=108.75 Aligned_cols=296 Identities=16% Similarity=0.116 Sum_probs=192.3
Q ss_pred CEEEEEEEEEEE---------ECCC-----CCEEEEEEEECCCCEEEEEC-CCCCCCCCCEEEEECCCCCCCCCCHHHHH
Q ss_conf 910589986886---------0797-----84299999984897676634-47866477546762689865168048999
Q gi|254780670|r 1 MFINDIIAREVI---------DSRG-----SPTIEVDVCLEDGSTGRAMV-PSGASTGIHEAFELRDQEKRYFGKGVLKA 65 (424)
Q Consensus 1 m~I~~i~~r~Il---------DSRG-----~PTvEvev~~~~g~~gra~~-PSGaStG~~Ea~elrD~~~~~~G~gV~~A 65 (424)
|+|++|...++- -+.+ +.++=|+|++++|..|.+-+ |.+...+.. ....
T Consensus 3 MKI~~i~~~~~~~Pl~~~~~~~~~~~~~~~~~~~iV~i~td~G~~G~GE~~~~~~~~~~~----------------~~~~ 66 (379)
T 2rdx_A 3 LRITRIRLYKTDLPYVDGSYGWGAGNAITVARASVVVIDTDAGLQGCGEFTPCGENYMIA----------------HSEG 66 (379)
T ss_dssp CCEEEEEEEEEEEEBTTSCCEETTTEECSEEEEEEEEEEETTSCEEEEEEBCSSTTSSSC----------------CTTH
T ss_pred CEEEEEEEEEEEECCCCCCCEECCCCEEEEEEEEEEEEEECCCCEEEEEEECCCCCCCHH----------------HHHH
T ss_conf 788489999996126678744446625763258999999899999998622788764220----------------5999
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCE
Q ss_conf 99998756789759885578988864653036643221232222024489987526634984888225324564754300
Q gi|254780670|r 66 IAFVNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLM 145 (424)
Q Consensus 66 v~~in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~ 145 (424)
++.+.+.+.|.|+|+|+.+...+.+.|...-.. ..-+.-|+.+|++-+.++..++|||+.|++.....+|+ .
T Consensus 67 ~~~~~~~l~~~l~g~d~~~~~~~~~~~~~~~~~------~~~a~~aid~AlwDl~~K~~g~pl~~lLgg~~~~~i~~--~ 138 (379)
T 2rdx_A 67 VDAFARLAAPQLLGQDPRQVARMERLMDHLVQG------HGYAKAPFDAAFWDILGQATGQPVWMLLGGKLCDGAPM--Y 138 (379)
T ss_dssp HHHHHHHHHHHHTTSCTTCHHHHHHHHHHHSSS------CHHHHHHHHHHHHHHHHHHHTCBHHHHTTSCCCSSEEB--C
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC------CHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCE--E
T ss_conf 999999866875389878999999999864024------37899999999999986362886243159864555530--1
Q ss_pred EECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 00036645567766102565148877489998999999999998752000013676557644886846899999999997
Q gi|254780670|r 146 NILNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYSTNVGDEGGFSPNLKTADSALDLIANSIE 225 (424)
Q Consensus 146 NiinGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t~vgDEGGfap~~~~~eeaL~ll~eAi~ 225 (424)
..+.+ .+..+..+. +.... +.|+..-.-. .| .+.++-++.+....+
T Consensus 139 ~~~~~--------------------~~~~e~~~~-------~~~~~-~~G~~~~K~k-~~-----~~~~~d~~~i~~ir~ 184 (379)
T 2rdx_A 139 RVAPQ--------------------RSEAETRAE-------LARHR-AAGYRQFQIK-VG-----ADWQSDIDRIRACLP 184 (379)
T ss_dssp EECCC--------------------SCSHHHHHH-------HHHHH-HTTCCEEEEE-CC-----SCHHHHHHHHHHHGG
T ss_pred CCCCC--------------------CCHHHHHHH-------HHHHH-HCCCCEEEEE-CC-----CCHHHHHHHHHHHHH
T ss_conf 04677--------------------998999899-------99987-4386224320-47-----871889999999763
Q ss_pred HCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCE
Q ss_conf 53853111023431104653202785111146865687899999998765448699776763104237998864238836
Q gi|254780670|r 226 KAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNC 305 (424)
Q Consensus 226 ~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~ 305 (424)
.. |.++.|.+|+- .-.+.++-+.+.. .+++|++...|.|+. ++.+..+..... +
T Consensus 185 ~~----g~~~~l~vDaN----------------~~~~~~~A~~~~~-~l~~~~~~~eEpp~~---~~~~~~~r~~~~--i 238 (379)
T 2rdx_A 185 LL----EPGEKAMADAN----------------QGWRVDNAIRLAR-ATRDLDYILEQPCRS---YEECQQVRRVAD--Q 238 (379)
T ss_dssp GS----CTTCEEEEECT----------------TCSCHHHHHHHHH-HTTTSCCEEECCSSS---HHHHHHHHTTCC--S
T ss_pred HC----CCCCEEECCCC----------------CCCCHHHHHHHHH-HHHHCCEECCCCCCH---HHHHHHHHHHHH--H
T ss_conf 02----87303532455----------------6789999999999-864056001478505---778999998531--0
Q ss_pred EEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHH--HHHHHHHHHCC
Q ss_conf 850430000214888521003865223425453003899999999999879869995078887235--89989998199
Q gi|254780670|r 306 QLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDH--TIADLAVATNC 382 (424)
Q Consensus 306 ~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~--~iaDLAVg~~a 382 (424)
-|..|. -+++..-+.+.++.++++.+.+||.-+|.+|++++.+.+|+++|+.+++.+ +.|+.=. ..+||+.++..
T Consensus 239 pia~~E-~~~~~~~~~~~~~~~~~d~i~~d~~~~GGit~~~~i~~~a~~~gi~~~~~~-~~~~~i~~~a~~hlaaa~~~ 315 (379)
T 2rdx_A 239 PMKLDE-CVTGLHMAQRIVADRGAEICCLKISNLGGLSKARRTRDFLIDNRMPVVAED-SWGGEIASAAVAHFAASTPE 315 (379)
T ss_dssp CEEECT-TCCSHHHHHHHHHHTCCSEEEEETTTTTSHHHHHHHHHHHHHTTCCEEEEC-SBCSHHHHHHHHHHHHTSCT
T ss_pred HHCCCC-CCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECC-CCCCHHHHHHHHHHHHHCCC
T ss_conf 010464-310025688887558755786246567859999999999998699299679-88768999999999995898
No 68
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=99.58 E-value=1.1e-11 Score=105.36 Aligned_cols=293 Identities=19% Similarity=0.218 Sum_probs=192.3
Q ss_pred CEEEEEEEEEEEE---------CCC-----CCEEEEEEEECCCCEEEEECCC-CCCCCCCEEEEECCCCCCCCCCHHHHH
Q ss_conf 9105899868860---------797-----8429999998489767663447-866477546762689865168048999
Q gi|254780670|r 1 MFINDIIAREVID---------SRG-----SPTIEVDVCLEDGSTGRAMVPS-GASTGIHEAFELRDQEKRYFGKGVLKA 65 (424)
Q Consensus 1 m~I~~i~~r~IlD---------SRG-----~PTvEvev~~~~g~~gra~~PS-GaStG~~Ea~elrD~~~~~~G~gV~~A 65 (424)
|+|++|..+.+-- |.+ ..+|=|+|.+++|..|.+-+.+ +...+ . ....+
T Consensus 4 MkI~~i~~~~~~~Pl~~p~~~~~~~~~~~~~~~~iV~v~td~G~~G~GE~~~~~~~~~---------------~-~~~~~ 67 (371)
T 2ps2_A 4 LKIARIDVFQVDLPYSGGVYYLSAGREYRSFDATIVRITTDTGIEGWGESTPFGSNYI---------------A-SHPRG 67 (371)
T ss_dssp CCEEEEEEEEEEECBTTSCCCCC-------EEEEEEEEEETTSCEEEEEECCSTTTSS---------------S-CCHHH
T ss_pred CEEEEEEEEEEECCCCCCCEEEECCCEEEEEEEEEEEEEECCCCEEEEECCCCCCCCC---------------C-CCHHH
T ss_conf 8898999999823667885154067079866789999998999999984267877532---------------0-12999
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCE
Q ss_conf 99998756789759885578988864653036643221232222024489987526634984888225324564754300
Q gi|254780670|r 66 IAFVNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLM 145 (424)
Q Consensus 66 v~~in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~ 145 (424)
+..+-+.+.|.|+|.++.+...+-+.|...-. ....+.-|+-+|++-+.++..++|||+.|++.....+| ..
T Consensus 68 ~~~~~~~l~~~l~g~~~~~~~~~~~~~~~~~~------~~~~a~said~AlwDl~gK~~~~pl~~lLGg~~~~~~~--~~ 139 (371)
T 2ps2_A 68 VRAGIATMAPSLIGLDPRRVDRINDAMDDALL------GHEDAKTAIDVACWDIFGKSVGLPVCELLGGRTNTRLP--LI 139 (371)
T ss_dssp HHHHHHHHHHHHTTSCTTCHHHHHHHHHHHCS------SCHHHHHHHHHHHHHHHHHHHTCBHHHHTTCCCSSCEE--BE
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC------CCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC--EE
T ss_conf 99999998787448985649999988665311------34568999999999999998199524423776443221--01
Q ss_pred EECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC---CCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 00036645567766102565148877489998999999999998752000013---676557644886846899999999
Q gi|254780670|r 146 NILNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYST---NVGDEGGFSPNLKTADSALDLIAN 222 (424)
Q Consensus 146 NiinGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t---~vgDEGGfap~~~~~eeaL~ll~e 222 (424)
..+.. .+..+..+. +++. .++|+.+ .+|. + ..+-.+.+..
T Consensus 140 ~~~~~--------------------~~~~~~~~~-------~~~~-~~~Gf~~~KiK~g~--------~-~~~~~~~~~~ 182 (371)
T 2ps2_A 140 SSIYV--------------------GEPEDMRAR-------VAKY-RAKGYKGQSVKISG--------E-PVTDAKRITA 182 (371)
T ss_dssp EEECS--------------------CCHHHHHHH-------HHHH-HTTTCCEEEEECCS--------C-HHHHHHHHHH
T ss_pred CCCCC--------------------CCHHHHHHH-------HHHH-HHCCCCCCCCCCCC--------C-CHHHHHHHHH
T ss_conf 12368--------------------999999999-------9998-75167520135788--------7-4688999899
Q ss_pred HHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCC
Q ss_conf 99753853111023431104653202785111146865687899999998765448699776763104237998864238
Q gi|254780670|r 223 SIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIG 302 (424)
Q Consensus 223 Ai~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g 302 (424)
+.... |.|+.|.+|+- ..++.++-+.+. +.+++|.+..+|+|+. +|+++.+|.++.+
T Consensus 183 ~~~~~----g~d~~l~vDaN----------------~~~~~~~a~~~~-~~l~~~~~~~~EeP~~--~~~~~~~l~~~~~ 239 (371)
T 2ps2_A 183 ALANQ----QPDEFFIVDAN----------------GKLSVETALRLL-RLLPHGLDFALEAPCA--TWRECISLRRKTD 239 (371)
T ss_dssp HTTTC----CTTCEEEEECT----------------TBCCHHHHHHHH-HHSCTTCCCEEECCBS--SHHHHHHHHTTCC
T ss_pred HHHHH----CCCCEEEECCC----------------CCCCHHHHHHHH-HHHHHCCCEEEECCCC--CHHHHHHHHHCCC
T ss_conf 99984----88852620433----------------469999999999-9876179489954744--5278999974179
Q ss_pred CCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHH--HHHHHH
Q ss_conf 836850430000214888521003865223425453003899999999999879869995078887235899--899981
Q gi|254780670|r 303 SNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIA--DLAVAT 380 (424)
Q Consensus 303 ~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~ia--DLAVg~ 380 (424)
+-|.+|.- ++.+.-+.+.++.+++..+.+|+.-+|.+|++++.+.+|+.+|+.++++| ..|+.=.+.| ||+-++
T Consensus 240 --ipIa~~E~-~~~~~~~~~~~~~~~~d~i~~d~~~~GGit~~~~~~~~a~~~g~~~~~~~-~~~~~I~~aa~lhl~aa~ 315 (371)
T 2ps2_A 240 --IPIIYDEL-ATNEMSIVKILADDAAEGIDLKISKAGGLTRGRRQRDICLAAGYSVSVQE-TCGSDIAFAAIVHLAQTI 315 (371)
T ss_dssp --SCEEESTT-CCSHHHHHHHHHHTCCSEEEEEHHHHTSHHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHHHHHTTS
T ss_pred --CCCCCCCC-HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECC-CCCCHHHHHHHHHHHHHC
T ss_conf --98746740-00235678898726542326574221877999999999998699987779-886799999999999868
Q ss_pred C
Q ss_conf 9
Q gi|254780670|r 381 N 381 (424)
Q Consensus 381 ~ 381 (424)
.
T Consensus 316 ~ 316 (371)
T 2ps2_A 316 P 316 (371)
T ss_dssp C
T ss_pred C
T ss_conf 9
No 69
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.48A {Mesorhizobium loti MAFF303099}
Probab=99.58 E-value=4e-12 Score=108.58 Aligned_cols=293 Identities=17% Similarity=0.163 Sum_probs=184.6
Q ss_pred CEEEEEEE--------EEEEECCCCCE----EEEEEEECCCCEEEEECCC-CCCCCCCEEEEECCCCCCCCCCHHHHHHH
Q ss_conf 91058998--------68860797842----9999998489767663447-86647754676268986516804899999
Q gi|254780670|r 1 MFINDIIA--------REVIDSRGSPT----IEVDVCLEDGSTGRAMVPS-GASTGIHEAFELRDQEKRYFGKGVLKAIA 67 (424)
Q Consensus 1 m~I~~i~~--------r~IlDSRG~PT----vEvev~~~~g~~gra~~PS-GaStG~~Ea~elrD~~~~~~G~gV~~Av~ 67 (424)
|+|+.++- |.+-+|++..+ +-|+|+|++|.+|.+-+.+ +...+. ......
T Consensus 3 mki~~~~i~~~~~~~~~~~~~s~~~~~~~~~~~V~i~td~G~~G~GE~~~~~~~~~~-----------------~~~~~~ 65 (389)
T 2oz8_A 3 LSLSHFRITRFQFARDRVIGDSQVRADDVNVAALELVSESGEVGLGFIQTLFNPLPD-----------------QQEIES 65 (389)
T ss_dssp CCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTSCEEEEEEEESSSCCCC-----------------HHHHHH
T ss_pred EEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEECCCCCCCC-----------------HHHHHH
T ss_conf 289999999999447773015886135179999999989999899987448888845-----------------999999
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEE
Q ss_conf 99875678975988557898886465303664322123222202448998752663498488822532456475430000
Q gi|254780670|r 68 FVNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNI 147 (424)
Q Consensus 68 ~in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~Ni 147 (424)
.++..+.|.|+|+++.+.. +.+..+-. .+...+...++-|+-||++-+.++..++|||+.|++. ..++|+...
T Consensus 66 ~~~~~l~p~l~g~~~~~~~---~~~~~~~~-~~~~~~~~~A~sAId~ALwDl~gK~~~~Pv~~LlGg~-~~~i~~yas-- 138 (389)
T 2oz8_A 66 VFEHEVWPSLKGNRAIALV---HRVNRPRG-GNQRAYSLPFHEAVQVALWDLAAKEAGLPLHVLLGSR-RNRVKAYAS-- 138 (389)
T ss_dssp HHHHHTHHHHTTSCHHHHT---TCCCCCC-------CCSCCHHHHHHHHHHHHHHHHTSBHHHHTTCS-CSEEEEEEE--
T ss_pred HHHHHHHHHCCCCCHHHHH---HHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC-CCEEEEEEE--
T ss_conf 9998508750799989999---99998754-2644425889999999999998877299747746986-541567762--
Q ss_pred CCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 03664556776610256514887748999899999999999875200001---367655764488684689999999999
Q gi|254780670|r 148 LNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYS---TNVGDEGGFSPNLKTADSALDLIANSI 224 (424)
Q Consensus 148 inGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~---t~vgDEGGfap~~~~~eeaL~ll~eAi 224 (424)
|+- .+ .+-.+.++. .+.. .++|+. ..+|. .+.++-++.+...-
T Consensus 139 --~~~---------------~~-~~~~~~~~~-------~~~~-~~~Gf~~~Kik~G~--------~d~~~di~~v~~ir 184 (389)
T 2oz8_A 139 --GLD---------------FH-LDDDAFVSL-------FSHA-ASIGYSAFKIKVGH--------RDFDRDLRRLELLK 184 (389)
T ss_dssp --CCB---------------TT-CCHHHHHHH-------HHHH-HHTTCCEEEEECCC--------SSHHHHHHHHHHHH
T ss_pred --CCC---------------CC-CCHHHHHHH-------HHHH-HHCCCCEEECCCCC--------CCHHHHHHHHHHHH
T ss_conf --367---------------78-999999999-------9999-86799778426677--------87788999999999
Q ss_pred HHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHH-HHHCCEEEEECCCCCCCHHHHHHHHHHCCC
Q ss_conf 7538531110234311046532027851111468656878999999987-654486997767631042379988642388
Q gi|254780670|r 225 EKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANL-VDQYPIYSIEDGMSEDDWHGWKILTNKIGS 303 (424)
Q Consensus 225 ~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l-~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~ 303 (424)
+. .|.++.|.+|+- + -.+.++-+.+...+ ...|.+.++|+|+..+|++++++|.+++..
T Consensus 185 ~~----~g~~~~l~vDaN-------~---------~~~~~~A~~~~~~~~~~~~~l~~iEeP~~~~d~~~l~~L~~~~~~ 244 (389)
T 2oz8_A 185 TC----VPAGSKVMIDPN-------E---------AWTSKEALTKLVAIREAGHDLLWVEDPILRHDHDGLRTLRHAVTW 244 (389)
T ss_dssp TT----SCTTCEEEEECT-------T---------CBCHHHHHHHHHHHHHTTCCCSEEESCBCTTCHHHHHHHHHHCCS
T ss_pred HH----HCCCCEEEECCC-------C---------CCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHCCC
T ss_conf 87----456856985255-------6---------889999999999998358782674589982126889999862577
Q ss_pred CEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCC
Q ss_conf 3685043000021488852100386522342545300389999999999987986999507888723589989998199
Q gi|254780670|r 304 NCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVATNC 382 (424)
Q Consensus 304 ~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~~a 382 (424)
..+.++-. . +..-.++.++.++++.+-+| |-+|++++.+.+|+.+|..+++++-..+ .-+|++.++..
T Consensus 245 -~~ia~ee~-~-~~~~~~~li~~~a~di~~~~----GGit~~~~ia~~A~~~gi~~~~g~~~~~----a~~hlaaa~p~ 312 (389)
T 2oz8_A 245 -TQINSGEY-L-DLQGKRLLLEAHAADILNVH----GQVTDVMRIGWLAAELGIPISIGNTFLE----AGVHMAVALPE 312 (389)
T ss_dssp -SEEEECTT-C-CHHHHHHHHHTTCCSEEEEC----SCHHHHHHHHHHHHHHTCCEEECCCGGG----TTHHHHHHSTT
T ss_pred -CCCCCCCE-E-CHHHHHHHHHCCCCEEEEEC----CCHHHHHHHHHHHHHCCCCEEECCHHHH----HHHHHHHHCCC
T ss_conf -52356514-3-44768999986997588876----6554699999999984995856708999----99999997799
No 70
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=99.55 E-value=1.3e-12 Score=112.20 Aligned_cols=296 Identities=18% Similarity=0.185 Sum_probs=190.5
Q ss_pred CEEEEEEEEEE--------EECCC----CCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHH
Q ss_conf 91058998688--------60797----8429999998489767663447866477546762689865168048999999
Q gi|254780670|r 1 MFINDIIAREV--------IDSRG----SPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAF 68 (424)
Q Consensus 1 m~I~~i~~r~I--------lDSRG----~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~ 68 (424)
|+|.+|+.+.+ -.|.| +++|-|+|.+++|.+|.+-+.+.... -+.......
T Consensus 10 ~~i~~i~~~~~~~Pl~~P~~~s~g~~~~r~~vlV~v~t~~G~~G~GE~~~~~~~-----------------~~~~~~~~~ 72 (392)
T 3ddm_A 10 ITPARVRAHVFRYPVSTPVKTSFGTMHDRPAVLVEVEDSDGAVGWGEVWCNFPA-----------------CGAEHRARL 72 (392)
T ss_dssp BCCCEEEEEEEEEEC-----------CEEEEEEEEEECTTSCEEEEECCCCSST-----------------THHHHHHHH
T ss_pred CCHHEEEEEEEEEECCCCEECCCEEEEEEEEEEEEEEECCCCEEEEEECCCCCC-----------------CCHHHHHHH
T ss_conf 732269999999756882788588999999999999989999999874178877-----------------767899999
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHCCCC--CCCCC--CCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCC
Q ss_conf 987567897598855789888646530366--43221--23222202448998752663498488822532456475430
Q gi|254780670|r 69 VNDEIRTALLGCDARDQLLIDKIMIDLDGT--PNKSR--LGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPL 144 (424)
Q Consensus 69 in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT--~nks~--lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~ 144 (424)
+++.++|.|+|+++.|...+...|...... ..... ....++-|+.||++-+.++..++|||+.+++... .+|+-.
T Consensus 73 i~~~l~~~l~g~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~~~A~said~ALwDl~gK~~~~Pv~~llGg~~~-~i~vya 151 (392)
T 3ddm_A 73 VETVLAPLLTARAFADPAQAFAHLEARTAVLAIQTGEPGPLAQAIAGLDIALCDLAARRAGQPLWAWLGGSGD-RIGVYA 151 (392)
T ss_dssp HHHTHHHHHTTSCBSSHHHHHHHHHHTTHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHTTCBHHHHTTCSCC-EEEEEE
T ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCC-CEEEEE
T ss_conf 9999999976998689899999999999886542165446899999999879989755149876661587532-113320
Q ss_pred EEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC---CCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 000036645567766102565148877489998999999999998752000013---67655764488684689999999
Q gi|254780670|r 145 MNILNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYST---NVGDEGGFSPNLKTADSALDLIA 221 (424)
Q Consensus 145 ~NiinGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t---~vgDEGGfap~~~~~eeaL~ll~ 221 (424)
. ...| .+..+.++ +. .++|+.+ .+|- ....-++.+.
T Consensus 152 --~----------------~~~~---~~~~e~~~----------~~-~~~Gf~~~K~k~g~---------~~~~D~~~v~ 190 (392)
T 3ddm_A 152 --S----------------GINP---ENPEDVVA----------RK-AAEGYRAFKLKVGF---------DDARDVRNAL 190 (392)
T ss_dssp --E----------------EECS---SSHHHHHH----------HH-HHHTCCCEEEECSS---------CHHHHHHHHH
T ss_pred --C----------------CCCC---CCHHHHHH----------HH-HHHCCCCCCCCCCC---------CCHHHHHHHH
T ss_conf --4----------------5788---77999999----------99-98388700244345---------5378899999
Q ss_pred HHHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCC-HHHHHHHHHH
Q ss_conf 999753853111023431104653202785111146865687899999998765448699776763104-2379988642
Q gi|254780670|r 222 NSIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDD-WHGWKILTNK 300 (424)
Q Consensus 222 eAi~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D-~~gw~~l~~~ 300 (424)
.+-+. .|.++.|.+|+- .-.+.++-+++... +++|.+.++|+|+..+| +.+|+.+.+.
T Consensus 191 ~~r~~----~g~~~~l~vDaN----------------~~~~~~~A~~~~~~-l~~~~~~~iEeP~~~~~~~~~~~~l~~~ 249 (392)
T 3ddm_A 191 HVREL----LGAATPLMADAN----------------QGWDLPRARQMAQR-LGPAQLDWLEEPLRADRPAAEWAELAQA 249 (392)
T ss_dssp HHHHH----HCSSSCEEEECT----------------TCCCHHHHHHHHHH-HGGGCCSEEECCSCTTSCHHHHHHHHHH
T ss_pred HHHHH----CCCCEEEEECCC----------------CCCCCCHHHHHHHH-HHHCCCCCCCCCCCCCCHHHHHHHHHHC
T ss_conf 99863----498647986036----------------77763124577888-6423754101677735707888887505
Q ss_pred CCCCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC--HHHHHHHHH
Q ss_conf 388368504300002148885210038652234254530038999999999998798699950788872--358998999
Q gi|254780670|r 301 IGSNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETE--DHTIADLAV 378 (424)
Q Consensus 301 ~g~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETe--D~~iaDLAV 378 (424)
.+ +-|.+|.- +.+...+++.++.++++.+.+|+..+|-+|++++.+++|+.+|+.+ +.|-. ++. -...+||+.
T Consensus 250 ~~--ipia~~E~-~~~~~~~~~~i~~~~~di~~~d~~~~GGit~~~~i~~~A~~~gi~v-~~h~~-~~~i~~~a~~hl~a 324 (392)
T 3ddm_A 250 AP--MPLAGGEN-IAGVAAFETALAARSLRVMQPDLAKWGGFSGCLPVARAVVAAGLRY-CPHYL-GAGIGLQASAHLLA 324 (392)
T ss_dssp CS--SCEEECTT-CCSHHHHHHHHHHTCEEEECCCTTTTTHHHHHHHHHHHHHHTTCEE-CCEEC-SCHHHHHHHHHHHH
T ss_pred CC--CEEECCCC-CCCHHHHHCHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEE-EECCC-CCHHHHHHHHHHHH
T ss_conf 87--30443654-3544442021103843799216321688999999999998679859-96689-86899999999998
Q ss_pred HHC
Q ss_conf 819
Q gi|254780670|r 379 ATN 381 (424)
Q Consensus 379 g~~ 381 (424)
++.
T Consensus 325 a~p 327 (392)
T 3ddm_A 325 AVP 327 (392)
T ss_dssp HSC
T ss_pred HCC
T ss_conf 573
No 71
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=99.54 E-value=2e-11 Score=103.43 Aligned_cols=298 Identities=16% Similarity=0.186 Sum_probs=193.6
Q ss_pred CEEEEEEEEEEE--------ECCCC------CEEEEEEEECCCCEEEEEC-CCCCCCCCCEEEEECCCCCCCCCCHHHHH
Q ss_conf 910589986886--------07978------4299999984897676634-47866477546762689865168048999
Q gi|254780670|r 1 MFINDIIAREVI--------DSRGS------PTIEVDVCLEDGSTGRAMV-PSGASTGIHEAFELRDQEKRYFGKGVLKA 65 (424)
Q Consensus 1 m~I~~i~~r~Il--------DSRG~------PTvEvev~~~~g~~gra~~-PSGaStG~~Ea~elrD~~~~~~G~gV~~A 65 (424)
|+|++|..+.+- .|+|. .+|=|+|++++|.+|.+-+ |.+...+. .....
T Consensus 3 MKI~~i~~~~~~~Pl~~p~~~s~g~~~~~~~~~vlV~i~td~G~~G~GE~~~~~~~~~~----------------~~~~~ 66 (378)
T 3eez_A 3 LKITRITVYQVDLPLEHPYWLSGGRLKFELLDATLVKLETDAGITGWGEGTPWGHTYVP----------------AHGPG 66 (378)
T ss_dssp CCEEEEEEEEEEEEBSSCCC------CCCEEEEEEEEEEETTCCCEEEEECCSCSSSSS----------------CCHHH
T ss_pred CEEEEEEEEEEEEECCCCEEECCCEEEEEEEEEEEEEEEECCCCEEEEEECCCCCCCCC----------------CCHHH
T ss_conf 48969999999850578758438558876777999999989999999831178777643----------------30899
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCE
Q ss_conf 99998756789759885578988864653036643221232222024489987526634984888225324564754300
Q gi|254780670|r 66 IAFVNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLM 145 (424)
Q Consensus 66 v~~in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~ 145 (424)
+..+-+.+.|.+++.++.+...+.+.+...-. ...-+.-|+.+|++-+.++..++|||+.+++......|. .
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~a~said~AlwDl~gK~~~~Pl~~LlGg~~~~~~~~--~ 138 (378)
T 3eez_A 67 IRAGIETMAPFVLGLDPRRLLDVERAMDIALP------GHLYAKSPIDMACWDIAGQAAGLPIADLMGGGSRTPRPI--A 138 (378)
T ss_dssp HHHHHHHHHHHHTTSCTTCHHHHHHHHHHHSS------SCHHHHHHHHHHHHHHHHHHTTSBHHHHTTCCCCSCEEB--B
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC------CCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCC--C
T ss_conf 99999997665137886778999999875122------417899999999999986363981789627875544432--1
Q ss_pred EECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC---CCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 00036645567766102565148877489998999999999998752000013---676557644886846899999999
Q gi|254780670|r 146 NILNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYST---NVGDEGGFSPNLKTADSALDLIAN 222 (424)
Q Consensus 146 NiinGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t---~vgDEGGfap~~~~~eeaL~ll~e 222 (424)
..+. ..+..+..+. ..+ +.++|+.+ .+|. +.++-++.+..
T Consensus 139 ~~~~--------------------~~~~~~~~~~-------~~~-~~~~G~~~~Kik~~~---------~~~~d~~~i~~ 181 (378)
T 3eez_A 139 SSVG--------------------AKSVEETRAV-------IDR-YRQRGYVAHSVKIGG---------DVERDIARIRD 181 (378)
T ss_dssp CCBC--------------------SCCHHHHHHH-------HHH-HHHTTCCEEEEECCS---------CHHHHHHHHHH
T ss_pred CCCC--------------------CCCHHHHHHH-------HHH-HHHCCCCEECCCCCC---------CHHHHHHHHHH
T ss_conf 2246--------------------6778999999-------999-997187243045689---------87999999999
Q ss_pred HHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCC
Q ss_conf 99753853111023431104653202785111146865687899999998765448699776763104237998864238
Q gi|254780670|r 223 SIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIG 302 (424)
Q Consensus 223 Ai~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g 302 (424)
+.++ .|.++.|.+|+- .-++.+|-+.+... +++|+|..+|+|. +++++..|.+..+
T Consensus 182 -vr~~---~g~~~~l~vDaN----------------~~~~~~~A~~~~~~-l~~~~i~~~E~P~---~~d~~~~l~~~~~ 237 (378)
T 3eez_A 182 -VEDI---REPGEIVLYDVN----------------RGWTRQQALRVMRA-TEDLHVMFEQPGE---TLDDIAAIRPLHS 237 (378)
T ss_dssp -HTTS---CCTTCEEEEECT----------------TCCCHHHHHHHHHH-TGGGTCCEECCSS---SHHHHHHTGGGCC
T ss_pred -HHHH---HCCCCEEEECCC----------------CCCCHHHHHHHHHH-HHHCCEEEEECCC---HHHHHHHHHHCCC
T ss_conf -9986---257636860366----------------55489999999987-7655900780511---6789998762147
Q ss_pred CCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCC
Q ss_conf 83685043000021488852100386522342545300389999999999987986999507888723589989998199
Q gi|254780670|r 303 SNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVATNC 382 (424)
Q Consensus 303 ~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~~a 382 (424)
+.|..|.- +++..-+++.++.++++-+.+|+..+|-+|++++.+.+|+.+|+.+++. ..+|+.=...+.+.++...
T Consensus 238 --~pia~~E~-~~~~~~~~~~~~~~~~di~~~d~~~~GGit~~~~i~~~a~~~g~~~~~~-~~~~s~i~~aa~~hlaaa~ 313 (378)
T 3eez_A 238 --APVSVDEC-LVTLQDAARVARDGLAEVFGIKLNRVGGLTRAARMRDIALTHGIDMFVM-ATGGSVLADAEALHLAATI 313 (378)
T ss_dssp --CCEEECTT-CCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCEEEEE-CSSCSHHHHHHHHHHHHTS
T ss_pred --CCCCCCCC-EEEHHHHHHHHHCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCEEEC-CCCCCHHHHHHHHHHHHHC
T ss_conf --88656652-2202567899972885202545552315229999999999869968973-8876399999999999968
Q ss_pred CHHEE
Q ss_conf 80100
Q gi|254780670|r 383 GQIKT 387 (424)
Q Consensus 383 ~~iK~ 387 (424)
+..-.
T Consensus 314 ~n~~~ 318 (378)
T 3eez_A 314 PDHAC 318 (378)
T ss_dssp CGGGB
T ss_pred CCCCC
T ss_conf 98543
No 72
>1ec7_A Glucarate dehydratase; lyase; 1.90A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1 PDB: 1ec8_A* 1ec9_A* 1ecq_A* 1jdf_A* 1jct_A* 1bqg_A
Probab=99.53 E-value=3.4e-12 Score=109.02 Aligned_cols=312 Identities=13% Similarity=0.132 Sum_probs=185.4
Q ss_pred EEEEEEEEEE--EECC-----C--CCEE---EEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH
Q ss_conf 1058998688--6079-----7--8429---9999984897676634478664775467626898651680489999999
Q gi|254780670|r 2 FINDIIAREV--IDSR-----G--SPTI---EVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAFV 69 (424)
Q Consensus 2 ~I~~i~~r~I--lDSR-----G--~PTv---Evev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~i 69 (424)
+|++|+++-| .||. | .|.. =|+|+|++|.+|.+-+|.+ ..+..++
T Consensus 9 ~i~~~~~~~~~~~~~~l~~~~g~h~~~~tr~iV~v~Td~Gi~G~GE~~~~--------------------~~~~~~i--- 65 (446)
T 1ec7_A 9 VVTEMQVIPVAGHDSMLMNLSGAHAPFFTRNIVIIKDNSGHTGVGEIPGG--------------------EKIRKTL--- 65 (446)
T ss_dssp BEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTSCEEEEEEECC--------------------HHHHHHH---
T ss_pred EEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCC--------------------HHHHHHH---
T ss_conf 47799999834788410145666667411169999989999899966795--------------------8999999---
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCC---------CCCCCCCCHHHHHHHHHHHHHCCCCHHHHCC-CCCCCC
Q ss_conf 875678975988557898886465303664322---------1232222024489987526634984888225-324564
Q gi|254780670|r 70 NDEIRTALLGCDARDQLLIDKIMIDLDGTPNKS---------RLGANAILGVSLAVSKAAAQTSNLPLYKYLG-GCSAHI 139 (424)
Q Consensus 70 n~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks---------~lGaNailAvSlA~akA~A~~~~~pLy~yl~-~~~~~~ 139 (424)
+.++|.|+|.++.+...+-+.|...-...... .....|+-|+-+|++-+.++..++|||+.|+ +.....
T Consensus 66 -e~~~p~LiG~~~~~~~~i~~~l~~~~~~~~~~g~g~~~~~~~~~~~A~saIDiALwDl~GK~~g~Pv~~LLGgg~~R~~ 144 (446)
T 1ec7_A 66 -EDAIPLVVGKTLGEYKNVLTLVRNTFADRDAGGRGLQTFDLRTTIHVVTGIEAAMLDLLGQHLGVNVASLLGDGQQRSE 144 (446)
T ss_dssp -HHHHHHHTTCBGGGHHHHHHHHHHHTC-------------CCSHHHHHHHHHHHHHHHHHHHHTCBSGGGSTTSCCCSE
T ss_pred -HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCE
T ss_conf -9999986799858899999999987400354554532345421688999999999999998819909999478887865
Q ss_pred CCCCCEEECCCC-CCCCCCCCC-----EEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHHCCCCC---CCCCCCCCCCC
Q ss_conf 754300000366-455677661-----025651488-77489998999999999998752000013---67655764488
Q gi|254780670|r 140 LPVPLMNILNGG-IHADNALDF-----QEFMIMPVG-AENIREAIRMGAEVFHTLKKELKSKGYST---NVGDEGGFSPN 209 (424)
Q Consensus 140 lP~P~~NiinGG-~HA~~~l~i-----QEfmIiP~g-~~sf~eal~~~~ev~~~lk~~L~~~g~~t---~vgDEGGfap~ 209 (424)
+|+.......|. ....-.... .++.-+... ..+-.+ +-+..++...+.|+.. .+|.
T Consensus 145 v~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~a~~~~~~~Gf~~~KiKvG~------- 210 (446)
T 1ec7_A 145 VEMLGYLFFVGNRKATPLPYQSQPDDSCDWYRLRHEEAMTPDA-------VVRLAEAAYEKYGFNDFKLKGGV------- 210 (446)
T ss_dssp EEBCEEEECBCCGGGSSSCCCCCTTCSSHHHHHTTSCBCSHHH-------HHHHHHHHHHHHCCSEEEEECSS-------
T ss_pred EEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHH-------HHHHHHHHHHHCCCCEEEEECCC-------
T ss_conf 8985311013776555421113543222123320103589999-------99999999996699859980698-------
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCC
Q ss_conf 68468999999999975385311102343110465320278511114686568789999999876544869977676310
Q gi|254780670|r 210 LKTADSALDLIANSIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSED 289 (424)
Q Consensus 210 ~~~~eeaL~ll~eAi~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~ 289 (424)
.+.++-++.+ .++.++. + |+.|.+|+- .. .+.++-+.+...| ++.+.++|+|+..+
T Consensus 211 -~~~~~di~~v-~aire~~--~--d~~l~vDaN-------~~---------w~~~~Ai~~~~~l--e~~l~w~EeP~~~~ 266 (446)
T 1ec7_A 211 -LAGEEEAESI-VALAQRF--P--QARITLDPN-------GA---------WSLNEAIKIGKYL--KGSLAYAEDPCGAE 266 (446)
T ss_dssp -SCHHHHHHHH-HHHHHHC--T--TSEEEEECT-------TC---------BCHHHHHHHHHHT--TTTEEEEESCBCCB
T ss_pred -CCHHHHHHHH-HHHHHHC--C--CCEEEEECC-------CC---------CCHHHHHHHHHHH--HCCCCEEECCCCCC
T ss_conf -9879999999-9999878--9--972988536-------79---------9999999999973--32640455467855
Q ss_pred CH----HHHHHHHHHCCCCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 42----37998864238836850430000214888521003865223425453003899999999999879869995078
Q gi|254780670|r 290 DW----HGWKILTNKIGSNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRS 365 (424)
Q Consensus 290 D~----~gw~~l~~~~g~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRS 365 (424)
|. +...++....+ +-|.+|.- .++...+...++.++++ ++++...+|-+|++++.+.+|+.+|+.++ .|..
T Consensus 267 d~~~~~~~l~~lr~~~~--iPIa~gE~-~~~~~~~~~~i~~~a~D-i~~~d~~~GGit~~~kia~lA~~~gi~v~-~h~~ 341 (446)
T 1ec7_A 267 QGFSGREVMAEFRRATG--LPTATNMI-ATDWRQMGHTLSLQSVD-IPLADPHFWTMQGSVRVAQMCHEFGLTWG-SHSN 341 (446)
T ss_dssp TTBCHHHHHHHHHHHHC--CCEEESSS-CSSHHHHHHHHHHTCCS-EEBCCHHHHCHHHHHHHHHHHHHTTCCCB-CCCC
T ss_pred CCCCHHHHHHHHHHCCC--CCCCCCCC-CCCHHHHHHHHHCCCCE-EEEECCCCCCHHHHHHHHHHHHHCCCEEE-ECCC
T ss_conf 55211578777741489--77000135-36534554554157626-99716233258889999999998799799-7178
Q ss_pred CCCCHHHHH--HHHHHH
Q ss_conf 887235899--899981
Q gi|254780670|r 366 GETEDHTIA--DLAVAT 380 (424)
Q Consensus 366 GETeD~~ia--DLAVg~ 380 (424)
+++.=.+.+ ||+.+.
T Consensus 342 ~~~~i~~aa~~hlaaa~ 358 (446)
T 1ec7_A 342 NHFDISLAMFTHVAAAA 358 (446)
T ss_dssp SCCHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHC
T ss_conf 76589999999999958
No 73
>3n4f_A Mandelate racemase/muconate lactonizing protein; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MSE; 1.88A {Geobacillus SP}
Probab=99.51 E-value=1e-11 Score=105.50 Aligned_cols=276 Identities=20% Similarity=0.237 Sum_probs=168.5
Q ss_pred CEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
Q ss_conf 42999999848976766344786647754676268986516804899999998756789759885578988864653036
Q gi|254780670|r 18 PTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAFVNDEIRTALLGCDARDQLLIDKIMIDLDG 97 (424)
Q Consensus 18 PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~in~~i~~~L~g~~~~dQ~~iD~~Li~lDg 97 (424)
++|-|.+.|++|.+|.+-+..+ ...++|.|+|+++.+. ++
T Consensus 43 ~~~~V~i~t~dG~~G~GE~~~~------------------------------~~~~a~~lig~~~~~~---------~~- 82 (392)
T 3n4f_A 43 CTVDIARITIDGQTGYGSSIHM------------------------------TPEWAEDVIGRRLLDL---------FD- 82 (392)
T ss_dssp EEEEEEEEEETTEEEEEECCSC------------------------------CHHHHHTTTTCBGGGG---------BC-
T ss_pred CEEEEEEEECCCCCEEEEHHCC------------------------------CHHHHHHHHCCCHHHH---------HC-
T ss_conf 3399999988998089752048------------------------------1667898849877886---------46-
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCC---CCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCHH
Q ss_conf 643221232222024489987526634984888225324564---75430000036645567766102565148877489
Q gi|254780670|r 98 TPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHI---LPVPLMNILNGGIHADNALDFQEFMIMPVGAENIR 174 (424)
Q Consensus 98 T~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~---lP~P~~NiinGG~HA~~~l~iQEfmIiP~g~~sf~ 174 (424)
....+..-++-|+.||++-+.++..++|||+.|+|..... .++|+... ++-.. +.....-.
T Consensus 83 --~~~~~~~~A~saId~ALwDl~gK~~g~Pl~~LLGG~~~~~~~~~~vp~Yas--~~~~~------------~~~~~~~~ 146 (392)
T 3n4f_A 83 --DRGRLREAYRLQLEYPVLDWLGQRQGKPVYDLVSGAHLETGASLVVPCYDT--SLYFD------------DLHLADER 146 (392)
T ss_dssp --TTSCBCGGGHHHHHHHHHHHHHHHHTSBHHHHSCCTTSCTTCCEEEEEEEE--EECBC------------CTTCCCHH
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCEEEEEEE--ECCCC------------CCCCCHHH
T ss_conf --024438999999999999998988499199984875445565532436886--22457------------77641023
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHCCCCC
Q ss_conf 99899999999999875200001---367655764488684689999999999753853111023431104653202785
Q gi|254780670|r 175 EAIRMGAEVFHTLKKELKSKGYS---TNVGDEGGFSPNLKTADSALDLIANSIEKAGYNAGKDLLIALDCAASAFFKKEK 251 (424)
Q Consensus 175 eal~~~~ev~~~lk~~L~~~g~~---t~vgDEGGfap~~~~~eeaL~ll~eAi~~aGy~~g~di~i~lD~AAsefy~~~k 251 (424)
..+. +.....++.+ ++|+. ..+|-.+...+...+.++-++.+ +++.++ .|.++.|.+|+
T Consensus 147 ~~~~---~~~~~a~~~~-~~Gf~~~KiKvG~~~~~~~~~~~~~~Di~~v-~avR~~---~G~~~~l~vDa---------- 208 (392)
T 3n4f_A 147 AAVA---LMQEEAMQGY-AKGQRHFKIKVGRGGRHMPLWEGTKRDIAIV-RGISEV---AGPAGKIMIDA---------- 208 (392)
T ss_dssp HHHH---HHHHHHHHHH-HTTCCCEEEECCHHHHTSCHHHHHHHHHHHH-HHHHHH---HCTTCCEEEEC----------
T ss_pred HHHH---HHHHHHHHHH-HCCCCEEEECCCCCCCCCCCCCCHHHHHHHH-HHHHHH---HCCCEEEEEEC----------
T ss_conf 3399---9999999999-7699778860357876665423899999999-999997---58981899974----------
Q ss_pred EEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHH---CCCCEEEECCCEEECCHHHHHHHHHCCC
Q ss_conf 1111468656878999999987654486997767631042379988642---3883685043000021488852100386
Q gi|254780670|r 252 YILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNK---IGSNCQLVGDDLFVTNPERLHKGINEEV 328 (424)
Q Consensus 252 Y~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~---~g~~~~IvGDDL~vTn~~rl~~gi~~~~ 328 (424)
+.-.|.++-+++...| ++|.+.++|+|+.++| .+|..+.+. .+..+-|.++-.+.+ .. ..+.+..++
T Consensus 209 ------N~~wt~~~A~~~~~~L-~~~~i~wiEeP~~~d~-~~~~~l~~~l~~~~~~~pia~gE~~~~-~~-~~~~i~~~a 278 (392)
T 3n4f_A 209 ------NNAYNLNLTKEVLAAL-SDVNLYWLEEAFHEDE-ALYEDLKEWLGQRGQNVLIADGEGLAS-PH-LIEWATRGR 278 (392)
T ss_dssp ------TTCCCHHHHHHHHHHT-TTSCEEEEECSSSCCH-HHHHHHHHHHHHTTCCCEEEECCSSCC-TT-HHHHHHTTS
T ss_pred ------CCCCCHHHHHHHHHHH-HCCCCCEECCCCCCCC-HHHHHHHHHHHHCCCCCEEECCCCCCH-HH-HHHHHHCCC
T ss_conf ------7553457899999975-1566502237888763-679999988752368854546764236-88-876531364
Q ss_pred CCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHH--HHHHHHH
Q ss_conf 522342545300389999999999987986999507888723589--9899981
Q gi|254780670|r 329 ANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTI--ADLAVAT 380 (424)
Q Consensus 329 ~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~i--aDLAVg~ 380 (424)
++.+-+|+.. |-+|+++....+|+.+|+.++ .|..| +.=.+. +||+.++
T Consensus 279 ~dii~~di~~-GGit~~~~ia~~A~~~gi~v~-~h~~~-~~i~~aa~~hl~aa~ 329 (392)
T 3n4f_A 279 VDVLQYDIIW-PGFTHWMELGEKLDAHGLRSA-PHCYG-NAYGIYASGHLSAAV 329 (392)
T ss_dssp CCEECCBTTT-BCHHHHHHHHHHHHHTTCEEC-CBCCS-CHHHHHHHHHHGGGC
T ss_pred CEEECCCCCC-CCHHHHHHHHHHHHHCCCEEE-EECCC-CHHHHHHHHHHHHHC
T ss_conf 1153376566-409999999999998799187-50798-689999999999968
No 74
>3p0w_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, protein structure initiative; HET: GKR; 1.71A {Ralstonia pickettii} PDB: 3nxl_A
Probab=99.50 E-value=8.9e-13 Score=113.36 Aligned_cols=316 Identities=16% Similarity=0.162 Sum_probs=188.2
Q ss_pred CEEEEEEEEEE-------EECCCC--CE---EEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHH
Q ss_conf 91058998688-------607978--42---9999998489767663447866477546762689865168048999999
Q gi|254780670|r 1 MFINDIIAREV-------IDSRGS--PT---IEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAF 68 (424)
Q Consensus 1 m~I~~i~~r~I-------lDSRG~--PT---vEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~ 68 (424)
+.|++|...-| |+..|. |- .=|+|+|++|.+|.+-+|. +..+..++
T Consensus 8 ~~It~i~~~pv~~~~~~~~~~~g~h~~~~~rtlV~V~TddGi~G~GE~~~--------------------~~~~~~~l-- 65 (470)
T 3p0w_A 8 PRVTEMQVIPVAGRDSMLLNLCGAHAPFFTRNLVILKDNAGRTGVGEVPG--------------------GEGIRQAL-- 65 (470)
T ss_dssp CBEEEEEEEEEEEECCCBEETTEECCSEEEEEEEEEEETTSCEEEEEEEC--------------------CHHHHHHH--
T ss_pred CEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCC--------------------CHHHHHHH--
T ss_conf 85789999972168840235566566651027999998999989997879--------------------77899999--
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHH-CCCCCCCCC------------------------CCCCCCCHHHHHHHHHHHHH
Q ss_conf 98756789759885578988864653-036643221------------------------23222202448998752663
Q gi|254780670|r 69 VNDEIRTALLGCDARDQLLIDKIMID-LDGTPNKSR------------------------LGANAILGVSLAVSKAAAQT 123 (424)
Q Consensus 69 in~~i~~~L~g~~~~dQ~~iD~~Li~-lDgT~nks~------------------------lGaNailAvSlA~akA~A~~ 123 (424)
+.++|.|+|.++.+.+.+=+.|.. +.+...... --.+++-|+-+|++-+.++.
T Consensus 66 --~~~ap~liG~d~~~ie~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~sAIDiALwDl~gK~ 143 (470)
T 3p0w_A 66 --ERVIPLVVGQSIGRTNGVLSSIRRALAGGGNAAHQATVHQVTSASEAAVLRQPHEINLRMDNVITAVEAALLDLLGQF 143 (470)
T ss_dssp --HHTGGGTTTCBGGGHHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf --999998669987899999999999851257544210001000000111023433333214779999999999999988
Q ss_pred CCCCHHHHCC-CCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHH----HHHHHHHHHHHHHHHCCCCC
Q ss_conf 4984888225-324564754300000366455677661025651488774899989----99999999998752000013
Q gi|254780670|r 124 SNLPLYKYLG-GCSAHILPVPLMNILNGGIHADNALDFQEFMIMPVGAENIREAIR----MGAEVFHTLKKELKSKGYST 198 (424)
Q Consensus 124 ~~~pLy~yl~-~~~~~~lP~P~~NiinGG~HA~~~l~iQEfmIiP~g~~sf~eal~----~~~ev~~~lk~~L~~~g~~t 198 (424)
.++|||+.|+ +.....+|+-..-...|.. ....+ .+...+.+...+...-. ...++-...++...+.|+.+
T Consensus 144 ~g~Pv~~LLGgg~~rd~v~~ya~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~~~~a~~~~~~~Gf~~ 219 (470)
T 3p0w_A 144 LEVPVAELLGAGQQRDSAPMLAYLFYVGDR-RKTDL---PYLEGANGADDWLRLRHEAAMTPAAIARLAEAATERYGFAD 219 (470)
T ss_dssp HTSBGGGTSTTSCCCSEEEBCEEECCBCCG-GGSCS---CCCCCCTTCCHHHHHTTSCBCSHHHHHHHHHHHHHHHCCSE
T ss_pred CCCCHHHHHCCCCCCCEEEEEEEEEECCCC-CCCCH---HHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCE
T ss_conf 399399995699866547899886413776-53210---11102333113666642214898999999999999669774
Q ss_pred ---CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHH
Q ss_conf ---67655764488684689999999999753853111023431104653202785111146865687899999998765
Q gi|254780670|r 199 ---NVGDEGGFSPNLKTADSALDLIANSIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVD 275 (424)
Q Consensus 199 ---~vgDEGGfap~~~~~eeaL~ll~eAi~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~ 275 (424)
.+| ....++.++.+ +|+.+++ .|+.|.+|+ +...|.++-+.+... .
T Consensus 220 ~KiKiG--------~~~~~~d~~~v-~avr~~~----~d~~l~vDa----------------N~~~~~~~Ai~~~~~-l- 268 (470)
T 3p0w_A 220 FKLKGG--------VMPGAEEMEAI-AAIKARF----PHARVTLDP----------------NGAWSLNEAIALCKG-Q- 268 (470)
T ss_dssp EEEECS--------SSCHHHHHHHH-HHHHHHC----TTSEEEEEC----------------TTBBCHHHHHHHHTT-C-
T ss_pred EEECCC--------CCCHHHHHHHH-HHHHHHC----CCCEEEEEC----------------CCCCCHHHHHHHHHH-H-
T ss_conf 612358--------99879999999-9999968----997597626----------------878889999999987-5-
Q ss_pred HCCEEEEECCCCCCCH----HHHHHHHHHCCCCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHH
Q ss_conf 4486997767631042----379988642388368504300002148885210038652234254530038999999999
Q gi|254780670|r 276 QYPIYSIEDGMSEDDW----HGWKILTNKIGSNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEK 351 (424)
Q Consensus 276 ~yPI~sIEDP~~e~D~----~gw~~l~~~~g~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~ 351 (424)
+|-+.++|+|+..+|+ ++.+++.++.+ +-|.+|.- .++...++..|+.++++-+.+++ .+|-+|+++....+
T Consensus 269 ~~~l~w~EEP~~~dd~~~~~~~l~~lr~~~~--iPIa~gE~-~~~~~~~~~~i~~~a~Div~~d~-~~GGit~~~kia~l 344 (470)
T 3p0w_A 269 GHLVAYAEDPCGPEAGYSGREVMAEFKRATG--IPTATNMI-ATDWRQMGHAVQLHAVDIPLADP-HFWTMQGSVRVAQL 344 (470)
T ss_dssp TTTCSEEESCBCCBTTBCHHHHHHHHHHHHC--CCEEESSS-SCSHHHHHHHHHTTCCSEEBCCH-HHHCHHHHHHHHHH
T ss_pred HHCHHEEECCCCHHHHHHHHHHHHHHHHHCC--CCCCCCCC-CCCHHHHHHHHHCCCCEEEEECC-CCCCCHHHHHHHHH
T ss_conf 3140101046672334436999999986169--88445766-47788888876457640999772-12682799999999
Q ss_pred HHHCCCEEEEECCCCCCCHHHHH--HHHHHH
Q ss_conf 99879869995078887235899--899981
Q gi|254780670|r 352 AQMAGYPSIISHRSGETEDHTIA--DLAVAT 380 (424)
Q Consensus 352 a~~~g~~~ivShRSGETeD~~ia--DLAVg~ 380 (424)
|+.+|..+++ |...++.=.+.+ ||+.++
T Consensus 345 A~~~gi~v~~-h~~~~~~i~~aa~~hl~aa~ 374 (470)
T 3p0w_A 345 CDEWGLTWGS-HSNNHFDVSLAMFTHVAAAA 374 (470)
T ss_dssp HHHHTCCCBC-CCCSCCHHHHHHHHHHHHTC
T ss_pred HHHCCCEEEE-CCCCCCHHHHHHHHHHHHHC
T ss_conf 9986996997-78876689999999999968
No 75
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=99.47 E-value=2e-11 Score=103.43 Aligned_cols=289 Identities=18% Similarity=0.160 Sum_probs=176.1
Q ss_pred EEECCCC----CEEEEEEEECCCCEEEEEC-CC-CCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf 8607978----4299999984897676634-47-8664775467626898651680489999999875678975988557
Q gi|254780670|r 11 VIDSRGS----PTIEVDVCLEDGSTGRAMV-PS-GASTGIHEAFELRDQEKRYFGKGVLKAIAFVNDEIRTALLGCDARD 84 (424)
Q Consensus 11 IlDSRG~----PTvEvev~~~~g~~gra~~-PS-GaStG~~Ea~elrD~~~~~~G~gV~~Av~~in~~i~~~L~g~~~~d 84 (424)
.-.|||. .++-|+|.+ +|.+|.+-| |. +-|... . ..+...-..+.+.|+|.++.+
T Consensus 20 ~~tS~g~~~~r~~~lv~i~~-dG~~G~GE~~p~p~~~~et-----------------~-~~~~~~l~~~~~~l~~~~~~~ 80 (377)
T 2pge_A 20 AGTSRGVLTSKPTWFVRLDI-DGHGGQGEVSLIPGLSLDP-----------------E-EQIGRELDLLARRLRAEEPIR 80 (377)
T ss_dssp ------CCCEECEEEEEEEE-TTEEEEEEEECCTTTCSSC-----------------H-HHHHHHHHHHHHHHHHSCCHH
T ss_pred CCCCCEEEEEEEEEEEEEEE-CCEEEEECCCCCCCCCCCC-----------------H-HHHHHHHHHHHHHHCCCCHHH
T ss_conf 78678899983799999998-9969996367888889888-----------------9-999999999999860468055
Q ss_pred HHHHHHHHHHCCC---------------CCCCCCCCCC--CCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEE
Q ss_conf 8988864653036---------------6432212322--2202448998752663498488822532456475430000
Q gi|254780670|r 85 QLLIDKIMIDLDG---------------TPNKSRLGAN--AILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNI 147 (424)
Q Consensus 85 Q~~iD~~Li~lDg---------------T~nks~lGaN--ailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~Ni 147 (424)
...+-..+...|= ....+..+.+ +..|+.+|++-+.++..++|||+.|++.. ..+|+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~paa~aaie~AlwDl~gk~~~~pl~~lLGg~~-~~i~~~~~-- 157 (377)
T 2pge_A 81 LRQFLAERGGADFSDYRSVLTDIAGILDSWQVSTDGRFPALRFALEMALLDLLSGGRQEWFASDFTRGE-KRIPVNGL-- 157 (377)
T ss_dssp HHHHHHHTSSCTTSCHHHHHHHHHHHHHHTTSSTTSSCHHHHHHHHHHHHHHHHTSSSCSSCSTTTTTS-CCEEBCEE--
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCC-CCEEEEEE--
T ss_conf 899999861677333889999987654332211345477999999999999974343991799748998-85377784--
Q ss_pred CCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 03664556776610256514887748999899999999999875200001---367655764488684689999999999
Q gi|254780670|r 148 LNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYS---TNVGDEGGFSPNLKTADSALDLIANSI 224 (424)
Q Consensus 148 inGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~---t~vgDEGGfap~~~~~eeaL~ll~eAi 224 (424)
+. . .+..+..+ .+++.+ ++|+. ..+|.. +.++-++.+....
T Consensus 158 i~------------------~--~~~~~~~~-------~~~~~~-~~G~~~~KiKvg~~--------~~~~d~~~i~~ir 201 (377)
T 2pge_A 158 IW------------------M--GEAAFMQE-------QIEAKL-AEGYGCLKLKIGAI--------DFDKECALLAGIR 201 (377)
T ss_dssp EC------------------C--CCHHHHHH-------HHHHHH-HTTCSEEEEEC-----------CHHHHHHHHHHHH
T ss_pred CC------------------C--CCHHHHHH-------HHHHHH-HCCCCEEEECCCCC--------CHHHHHHHHHHHH
T ss_conf 58------------------9--99999999-------999999-66998797268888--------5889999999999
Q ss_pred HHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCC
Q ss_conf 75385311102343110465320278511114686568789999999876544869977676310423799886423883
Q gi|254780670|r 225 EKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSN 304 (424)
Q Consensus 225 ~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~ 304 (424)
+..| ++++.|.+|+ ++. ++.++.+.+... +++|+|.+||+|+..+||+++.+|..+.+
T Consensus 202 ~~~g---~~~~~l~vDa-------N~~---------~~~~~a~~~~~~-l~~~~i~~iEeP~~~~~~~~~~~l~~~~~-- 259 (377)
T 2pge_A 202 ESFS---PQQLEIRVDA-------NGA---------FSPANAPQRLKR-LSQFHLHSIEQPIRQHQWSEMAALCANSP-- 259 (377)
T ss_dssp HHSC---TTTCEEEEEC-------TTB---------BCTTTHHHHHHH-HHTTCCSEEECCBCSSCHHHHHHHHHHCS--
T ss_pred HHHC---CCCCEEECCC-------CCC---------HHHHHHHHHHHH-HHHHHHHHHHCCCCCCCHHHHHHHHHCCC--
T ss_conf 9742---4575697244-------532---------156679999876-31014568757778542788999997048--
Q ss_pred EEEECCCEEE-CCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHH--HHHHHH
Q ss_conf 6850430000-214888521003865223425453003899999999999879869995078887235899--899981
Q gi|254780670|r 305 CQLVGDDLFV-TNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIA--DLAVAT 380 (424)
Q Consensus 305 ~~IvGDDL~v-Tn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~ia--DLAVg~ 380 (424)
+-|..|.-.. ...-+....++..++..+.+||..+|.+|++++.+++|+.+|+.+++++ .-||.=...+ |||-..
T Consensus 260 ~pIa~dEs~~~~~~~~~~~~~~~~~~d~i~~k~~~~GGi~~~~~i~~~a~~~gi~~~~~~-~~es~i~~~a~~hlaa~~ 337 (377)
T 2pge_A 260 LAIALDEELIGLGAEQRSAMLDAIRPQYIILKPSLLGGFHYAGQWIELARERGIGFWITS-ALESNLGLAAIAQWTALY 337 (377)
T ss_dssp SCEEESGGGTTCCTHHHHHHHHHHCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEEBC-CSCCHHHHHHHHHHHHTT
T ss_pred CEEECCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEECC-CCCCHHHHHHHHHHHHCC
T ss_conf 649767861451068999985355555697363101999999999999998599589789-755699999999999668
No 76
>2pmq_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, isomerase, PSI-2, protein structure initiative; HET: MSE; 1.72A {Roseovarius SP}
Probab=99.46 E-value=1.3e-10 Score=97.32 Aligned_cols=294 Identities=16% Similarity=0.160 Sum_probs=182.1
Q ss_pred CEEEEEEEEEE---E------ECCC----CCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHH
Q ss_conf 91058998688---6------0797----842999999848976766344786647754676268986516804899999
Q gi|254780670|r 1 MFINDIIAREV---I------DSRG----SPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIA 67 (424)
Q Consensus 1 m~I~~i~~r~I---l------DSRG----~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~ 67 (424)
|+|++|..+.+ + .|+| +.++=|+|++++|..|.+-++.-.. .|.+ .....+.
T Consensus 3 MKI~~i~~~~~~~P~~~~p~~~s~g~~~~~~~~lV~i~td~G~~G~GE~~~~~~--------------~~~~-~~~~~~~ 67 (377)
T 2pmq_A 3 LKIAEIQLFQHDLPVVNGPYRIASGDVWSLTTTIVKIIAEDGTIGWGETCPVGP--------------TYAE-AHAGGAL 67 (377)
T ss_dssp -CEEEEEEEEEEEECTTCCBCCTTCCBSEEEEEEEEEEETTSCEEEEEECCSSS--------------SSSS-CCHHHHH
T ss_pred CEEEEEEEEEEECCCCCCCCCCCCEEEEEEEEEEEEEEECCCCEEEEEECCCCC--------------CCHH-HHHHHHH
T ss_conf 488599999995667889827567489998999999998999999986048888--------------7517-6799999
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEE
Q ss_conf 99875678975988557898886465303664322123222202448998752663498488822532456475430000
Q gi|254780670|r 68 FVNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNI 147 (424)
Q Consensus 68 ~in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~Ni 147 (424)
.+.+.++|.|+|+++.++.........+.. ..-+.-|+.+|++-+.++..++|||+.|++.....+|+-. .
T Consensus 68 ~~~~~l~~~l~g~d~~~~~~~~~~~~~~~~-------~~~a~said~AlwDl~gK~~~~Pl~~llGg~~~~~i~~~~--~ 138 (377)
T 2pmq_A 68 AALEVLASGLAGAEALPLPLHTRMDSLLCG-------HNYAKSALDIAVHDLWGKRLGVPVHELLGGALTDSVSSYY--S 138 (377)
T ss_dssp HHHHHHHHTTTTCCSSHHHHHHHHHHHCSC-------CHHHHHHHHHHHHHHHHHHHTCBHHHHTTCCSCSEEECEE--E
T ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEEEE--E
T ss_conf 999998887536666618999999876302-------1889999999876764533398456742775443035765--1
Q ss_pred CCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 03664556776610256514887748999899999999999875200001---367655764488684689999999999
Q gi|254780670|r 148 LNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYS---TNVGDEGGFSPNLKTADSALDLIANSI 224 (424)
Q Consensus 148 inGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~---t~vgDEGGfap~~~~~eeaL~ll~eAi 224 (424)
+. ..+-.+..+ .+.+.+ ++|+. ..+|. .+.++-++.+....
T Consensus 139 ~~--------------------~~~~~~~~~-------~~~~~~-~~G~~~~KiKvg~--------~~~~~di~~i~~i~ 182 (377)
T 2pmq_A 139 LG--------------------VMEPDEAAR-------QALEKQ-REGYSRLQVKLGA--------RPIEIDIEAIRKVW 182 (377)
T ss_dssp EC--------------------SCCHHHHHH-------HHHHHH-HHTCSEEEEECCS--------SCHHHHHHHHHHHH
T ss_pred CC--------------------CCCCHHHHH-------HHHHHH-HCCCCCEEEEEEC--------CCHHHHHHHHHHHH
T ss_conf 13--------------------689167799-------999999-7699821478622--------78799999999999
Q ss_pred HHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCC
Q ss_conf 75385311102343110465320278511114686568789999999876544869977676310423799886423883
Q gi|254780670|r 225 EKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSN 304 (424)
Q Consensus 225 ~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~ 304 (424)
+.. .|.++.|.+|+- .-.|.++-+.+...| +++++...|+|...| .+..+.+....
T Consensus 183 ~~~---~g~~~~l~vDaN----------------~~~s~~~A~~~~~~l-~~~~~~~eEp~~~~d---~~~~~~~~~~~- 238 (377)
T 2pmq_A 183 EAV---RGTGIALAADGN----------------RGWTTRDALRFSREC-PDIPFVMEQPCNSFE---DLEAIRPLCHH- 238 (377)
T ss_dssp HHH---TTSCCEEEEECT----------------TCCCHHHHHHHHHHC-TTSCEEEESCSSSHH---HHHHHGGGCCS-
T ss_pred HHC---CCCEEEEEEECC----------------CCCCHHHHHHHHHHH-HHHHHHHCCCCHHHH---HHHHHHHHCCC-
T ss_conf 971---686369999888----------------998999999999988-865565417730678---99876540157-
Q ss_pred EEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCH--HHHHHHHHHHC
Q ss_conf 685043000021488852100386522342545300389999999999987986999507888723--58998999819
Q gi|254780670|r 305 CQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETED--HTIADLAVATN 381 (424)
Q Consensus 305 ~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD--~~iaDLAVg~~ 381 (424)
-|..|. -++++.-+.+.++.++++.+.+||..+|-+|++++.+.+|+.+|..+++++-.+ +.= ...+|||.+..
T Consensus 239 -pia~~E-~~~~~~~~~~~~~~~~~d~~~~d~~~~GGit~~~~i~~~a~~~gi~~~~~~~~~-~~i~~aa~~hlaaa~~ 314 (377)
T 2pmq_A 239 -ALYMDE-DGTSLNTVITAAATSLVDGFGMKVSRIGGLQHMRAFRDFCAARNLPHTCDDAWG-GDIVSAACTHIASTVL 314 (377)
T ss_dssp -CEEEST-TCCSHHHHHHHHHTTCCSEECCBHHHHTSHHHHHHHHHHHHHHTCCEECBCSSC-SHHHHHHHHHHHTTSC
T ss_pred -CCCCCC-CCCCHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCC-CHHHHHHHHHHHHHCC
T ss_conf -732465-456656678898727878740345433761699999999998599887678775-6999999999998188
No 77
>1jpd_X L-Ala-D/L-Glu epimerase; enolase superfamily, muconate lactonizing enzyme subgroup, alpha/beta barrel, structural genomics, isomerase; 2.60A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1
Probab=99.43 E-value=8.7e-11 Score=98.65 Aligned_cols=266 Identities=14% Similarity=0.151 Sum_probs=170.4
Q ss_pred EEEEEEEEEE--------EECCCCCE----EEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH
Q ss_conf 1058998688--------60797842----99999984897676634478664775467626898651680489999999
Q gi|254780670|r 2 FINDIIAREV--------IDSRGSPT----IEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAFV 69 (424)
Q Consensus 2 ~I~~i~~r~I--------lDSRG~PT----vEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~i 69 (424)
.|+.|..+++ -.|+|.-| |-|+|. ++|.+|.+-++.... .|.....+...+
T Consensus 3 ~i~~i~~~~~~~Pl~~p~~~s~g~~~~~~~~lV~i~-~~G~~G~GE~~p~p~----------------~~e~~~~~~~~i 65 (324)
T 1jpd_X 3 HMRTVKVFEEAWPLHTPFVIARGSRSEARVVVVELE-EEGIKGTGECTPYPR----------------YGESDASVMAQI 65 (324)
T ss_dssp SCCEEEEEEEEEEBSCC------CCSEEEEEEEEEE-ETTEEEEEEECCCGG----------------GTCCHHHHHHHH
T ss_pred EEEEEEEEEEEECCCCCEECCCEEEEEEEEEEEEEE-ECCEEEEEEECCCCC----------------CCCCHHHHHHHH
T ss_conf 368999999985466977887889999889999999-899299996248877----------------682399999999
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEECC
Q ss_conf 87567897598855789888646530366432212322220244899875266349848882253245647543000003
Q gi|254780670|r 70 NDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNILN 149 (424)
Q Consensus 70 n~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~Niin 149 (424)
...+.+.+.+.+..+...+.. ..-+..|+.+|++-+.++..++|||+.|++.....+|.- ..+.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~aid~Al~Dl~gk~~~~pl~~llg~~~~~~i~~~--~~~~ 129 (324)
T 1jpd_X 66 MSVVPQLEKGLTREELQKILP--------------AGAARNALDCALWDLAARRQQQSLADLIGITLPETVITA--QTVV 129 (324)
T ss_dssp HTTHHHHHTTCCHHHHHHHSC--------------SSHHHHHHHHHHHHHHHHTTTCCHHHHHTCCCCSEEEBC--EEEC
T ss_pred HHHHHHHHCCCCHHHHHHHCC--------------CHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCEEE--ECCC
T ss_conf 974055533778999998513--------------657999999999999987649981210587678653244--2377
Q ss_pred CCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC---CCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 6645567766102565148877489998999999999998752000013---6765576448868468999999999975
Q gi|254780670|r 150 GGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYST---NVGDEGGFSPNLKTADSALDLIANSIEK 226 (424)
Q Consensus 150 GG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t---~vgDEGGfap~~~~~eeaL~ll~eAi~~ 226 (424)
..+..+.++. +++. .++|+.+ .+|. +...+.+ .++..
T Consensus 130 --------------------~~~~e~~~~~-------~~~~-~~~G~~~~Kik~g~--------~~~~~~i----~~~~~ 169 (324)
T 1jpd_X 130 --------------------IGTPDQMANS-------ASTL-WQAGAKLLKVKLDN--------HLISERM----VAIRT 169 (324)
T ss_dssp --------------------SCCHHHHHHH-------HHHH-HHTTCSEEEEECCS--------SCHHHHH----HHHHH
T ss_pred --------------------CCCHHHHHHH-------HHHH-HHCCCCEEEECCCC--------CHHHHHH----HHHHC
T ss_conf --------------------8999999999-------9999-85897458514532--------0377777----76522
Q ss_pred CCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEE
Q ss_conf 38531110234311046532027851111468656878999999987654486997767631042379988642388368
Q gi|254780670|r 227 AGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQ 306 (424)
Q Consensus 227 aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~ 306 (424)
+. .|+.|.+|+ ++. .|.++-+++... +++|+|.+||+|+..+|+++...+... +-
T Consensus 170 ~~----~d~~l~lDa-------N~~---------~~~~~A~~~~~~-l~~~~i~~iEqP~~~~~~~~~~~l~~~----ip 224 (324)
T 1jpd_X 170 AV----PDATLIVDA-------NES---------WRAEGLAARCQL-LADLGVAMLEQPLPAQDDAALENFIHP----LP 224 (324)
T ss_dssp HC----TTSEEEEEC-------TTC---------CCSTTHHHHHHH-HHHTTCCEEECCSCTTSCGGGGSSCCS----SC
T ss_pred CC----CCCCEEECC-------CCC---------CCHHHHHHHHHH-HHHHCCCEEECCCCCCCHHHHHHHHHC----CC
T ss_conf 24----664477236-------467---------689999999999-873088489889999889999997412----98
Q ss_pred EECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC
Q ss_conf 504300002148885210038652234254530038999999999998798699950788872
Q gi|254780670|r 307 LVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETE 369 (424)
Q Consensus 307 IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETe 369 (424)
|..|.-..+-.. ++.- .+++..+.+||..+|.+|++++.+++|+.+|..+++++ +-||.
T Consensus 225 ia~dE~~~~~~~-~~~~--~~~~d~~~~k~~~~GGi~~~~~i~~~a~~~gi~~~~~~-~~e~~ 283 (324)
T 1jpd_X 225 ICADESCHTRSN-LKAL--KGRYEMVNIKLDKTGGLTEALALATEARAQGFSLMLGC-MLCTS 283 (324)
T ss_dssp EEESTTCSSGGG-HHHH--BTTBSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC-CSCCH
T ss_pred CCCCCCCCCHHH-HHHH--HHHCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECC-HHHHH
T ss_conf 433768799999-9999--86368698278713889999999999998799199748-06779
No 78
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=99.41 E-value=8e-11 Score=98.90 Aligned_cols=302 Identities=16% Similarity=0.179 Sum_probs=181.0
Q ss_pred CEEEEEEEEEEE--------ECC----CCCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHH
Q ss_conf 910589986886--------079----78429999998489767663447866477546762689865168048999999
Q gi|254780670|r 1 MFINDIIAREVI--------DSR----GSPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAF 68 (424)
Q Consensus 1 m~I~~i~~r~Il--------DSR----G~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~ 68 (424)
|+|+.|..+.+- .|. .+.++=|+|.|+.|..|.+.+.-|-+... .+. ....
T Consensus 4 M~I~~i~~~~~~~Pl~~p~~~s~~~~~~~~~~lV~i~td~g~~G~g~~G~ge~~~~-----------~~~------~~~~ 66 (392)
T 1tzz_A 4 MSVRIVDVREITKPISSPIRNAYIDFTKMTTSLVAVVTDVVREGKRVVGYGFNSNG-----------RYG------QGGL 66 (392)
T ss_dssp --CCEEEEEEEEEECCC---------CCCEEEEEEEEEEEECSSSEEEEEEECCTT-----------SCC------CHHH
T ss_pred CEEEEEEEEEEEEECCCCEECCCEEEEEEEEEEEEEEECCCCCCCEEEEEEECCCC-----------HHH------HHHH
T ss_conf 67999999999980799948712899999999999998987778469998838786-----------336------8999
Q ss_pred HHHHHHHHHCCCCHHHH----------HHHHHHHHHCCCCCCCCC--CCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCC
Q ss_conf 98756789759885578----------988864653036643221--232222024489987526634984888225324
Q gi|254780670|r 69 VNDEIRTALLGCDARDQ----------LLIDKIMIDLDGTPNKSR--LGANAILGVSLAVSKAAAQTSNLPLYKYLGGCS 136 (424)
Q Consensus 69 in~~i~~~L~g~~~~dQ----------~~iD~~Li~lDgT~nks~--lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~ 136 (424)
+.+.++|.++|.++.+. ..+-+.|... ..... ....|+-|+-+|++-+.++..++|||+.|++..
T Consensus 67 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~g~~~~A~said~AlwDl~gK~~g~Pl~~LLGg~~ 143 (392)
T 1tzz_A 67 IRERFASRILEADPKKLLNEAGDNLDPDKVWAAMMIN---EKPGGHGERSVAVGTIDMAVWDAVAKIAGKPLFRLLAERH 143 (392)
T ss_dssp HHHTHHHHHHTSCGGGSBCTTSSSBCHHHHHHHHTTT---CCSCCCSHHHHHHHHHHHHHHHHHHHHHTSBHHHHHHHHT
T ss_pred HHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHH---HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCC
T ss_conf 9999999985679677654224745899999999874---2126775278999999999999974451785999616757
Q ss_pred C--CCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC---CCCCCCCCCCCCC
Q ss_conf 5--6475430000036645567766102565148877489998999999999998752000013---6765576448868
Q gi|254780670|r 137 A--HILPVPLMNILNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYST---NVGDEGGFSPNLK 211 (424)
Q Consensus 137 ~--~~lP~P~~NiinGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t---~vgDEGGfap~~~ 211 (424)
. .+-.+|.... ++.. ....+..+.. ..+++.+ ++|+.+ .+|. .
T Consensus 144 ~~~~~~~v~~y~s--~~~~--------------~~~~~~~~~~-------~~~~~~~-~~G~~~~Kik~~~--------~ 191 (392)
T 1tzz_A 144 GVKANPRVFVYAA--GGYY--------------YPGKGLSMLR-------GEMRGYL-DRGYNVVKMKIGG--------A 191 (392)
T ss_dssp TSCCCCEEEEEEE--CCCC------------------CHHHHH-------HHHHHHH-TTTCSEEEEECSS--------S
T ss_pred CCCCCCEEEEEEC--CCCC--------------CCCCCHHHHH-------HHHHHHH-HCCCCEEECCCCC--------C
T ss_conf 8877655778740--3444--------------5678999999-------9999998-5697435035678--------7
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCH
Q ss_conf 46899999999997538531110234311046532027851111468656878999999987654486997767631042
Q gi|254780670|r 212 TADSALDLIANSIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDW 291 (424)
Q Consensus 212 ~~eeaL~ll~eAi~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~ 291 (424)
..++.++.+...-+.. |.++.|.+|+- .-+|.++-+.+... +++|++.++|+|+..+|+
T Consensus 192 ~~~~d~~~v~~vr~~~----g~~~~l~vDaN----------------~~~~~~~A~~~~~~-L~~~~l~~~EeP~~~~d~ 250 (392)
T 1tzz_A 192 PIEEDRMRIEAVLEEI----GKDAQLAVDAN----------------GRFNLETGIAYAKM-LRDYPLFWYEEVGDPLDY 250 (392)
T ss_dssp CHHHHHHHHHHHHHHH----TTTCEEEEECT----------------TCCCHHHHHHHHHH-HTTSCCSEEECCSCTTCH
T ss_pred CHHHHHHHHHHHHHHC----CCCCEEEECCC----------------CCCCHHHHHHHHHH-HHHCCCCCEECCCCHHHH
T ss_conf 3788999999999864----99754863266----------------67689999999998-310587525157670214
Q ss_pred HHHHHHHHHCCCCEEEECCCEEECCHHHHHHHHHCC----CCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEE--EECCC
Q ss_conf 379988642388368504300002148885210038----652234254530038999999999998798699--95078
Q gi|254780670|r 292 HGWKILTNKIGSNCQLVGDDLFVTNPERLHKGINEE----VANAILIKPNQIGSVSETLNTIEKAQMAGYPSI--ISHRS 365 (424)
Q Consensus 292 ~gw~~l~~~~g~~~~IvGDDL~vTn~~rl~~gi~~~----~~NailiK~NQiGTvset~ea~~~a~~~g~~~i--vShRS 365 (424)
+++++|.+..+ +-|.+|.-.. ++.-.+..|+.. +.+.+-+|+...|-+|+++..+.+|+.+|+..+ .+|-.
T Consensus 251 ~~~~~l~~~~~--ipIa~gE~~~-~~~d~~~li~~~a~~~~vd~~~~d~~~~GGit~~~~i~~~a~~~gi~~~~~~~~~~ 327 (392)
T 1tzz_A 251 ALQAALAEFYP--GPMATGENLF-SHQDARNLLRYGGMRPDRDWLQFDCALSYGLCEYQRTLEVLKTHGWSPSRCIPHGG 327 (392)
T ss_dssp HHHHHHTTTCC--SCEEECTTCC-SHHHHHHHHHHSCCCTTTCEECCCTTTTTCHHHHHHHHHHHHHTTCCGGGBCCSCC
T ss_pred HHHHHHHHHCC--CCCCCCCCCC-CHHHHHHHHHHCCCCCCCCEEECCCCEECCHHHHHHHHHHHHHCCCCCCEECCCCH
T ss_conf 55677886179--8975786301-17999999982653346875520244537875999999999985998761766538
Q ss_pred CCCCHHHHHHHHHHHCC
Q ss_conf 88723589989998199
Q gi|254780670|r 366 GETEDHTIADLAVATNC 382 (424)
Q Consensus 366 GETeD~~iaDLAVg~~a 382 (424)
+ ..-++++.++..
T Consensus 328 --~--~~~~~~~a~~~~ 340 (392)
T 1tzz_A 328 --H--QMSLNIAAGLGL 340 (392)
T ss_dssp --B--HHHHHHHHHHTC
T ss_pred --H--HHHHHHHHHHCC
T ss_conf --9--999999998307
No 79
>2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genomics, protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A
Probab=99.32 E-value=4.4e-10 Score=93.46 Aligned_cols=272 Identities=11% Similarity=0.108 Sum_probs=171.4
Q ss_pred CEEEEEEEEEE--------EECCC----CCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHH
Q ss_conf 91058998688--------60797----8429999998489767663447866477546762689865168048999999
Q gi|254780670|r 1 MFINDIIAREV--------IDSRG----SPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAF 68 (424)
Q Consensus 1 m~I~~i~~r~I--------lDSRG----~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~ 68 (424)
|+|++|..+.+ -.|+| +.++=|+|.+++|..|.+-+....+ +.|.+..+..+...
T Consensus 2 MKI~~i~~~~~~~pl~~P~~~s~~~~~~r~~~lv~i~t~~G~~G~GE~~~~~~-------------p~y~~et~~~~~~~ 68 (342)
T 2okt_A 2 LKLTALHFYKYSEPFKSQIVTPKVTLTHRDCLFIELIDDKGNAYFGECNAFQT-------------DWYDHETIASVKHV 68 (342)
T ss_dssp BCEEEEEEEEEEEEEEEEEECSSCEEEEEEEEEEEEEETTCCEEEEECCCBSS-------------TTSCSCBHHHHHHH
T ss_pred CEEEEEEEEEEEEECCCCEECCCEEEEEEEEEEEEEEECCCCEEEEEECCCCC-------------CCCCHHHHHHHHHH
T ss_conf 57869999999750688748478899998999999998999989986357788-------------87587689999999
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEEC
Q ss_conf 98756789759885578988864653036643221232222024489987526634984888225324564754300000
Q gi|254780670|r 69 VNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNIL 148 (424)
Q Consensus 69 in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~Nii 148 (424)
+++.+.+ +++.++.+...+-+.+..+.+.+ .+..|+.+|++-..++. |...++
T Consensus 69 l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~-------~A~said~AlwDl~~k~-------------------~~~~l~ 121 (342)
T 2okt_A 69 IEQWFED-NRNKSFETYEAALKLVDSLENTP-------AARATIVMALYQMFHVL-------------------PSFSVA 121 (342)
T ss_dssp HHHHHHH-HTTCCBCSHHHHHHTTGGGTTCH-------HHHHHHHHHHHHTTCCC-------------------CCEEEE
T ss_pred HHHHHHH-HCCCCHHHHHHHHHHHHHCCCCH-------HHHHHHHHHHHHHHCCC-------------------CCCEEE
T ss_conf 9999876-41488121999999876634877-------89988888766664127-------------------773110
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 3664556776610256514887748999899999999999875200001---3676557644886846899999999997
Q gi|254780670|r 149 NGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYS---TNVGDEGGFSPNLKTADSALDLIANSIE 225 (424)
Q Consensus 149 nGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~---t~vgDEGGfap~~~~~eeaL~ll~eAi~ 225 (424)
.|+... +. +- +.++ +. .+.|+. ..++. +.++. .++++
T Consensus 122 ~G~~~~--------------~~-~~-~~~~----------~~-~~~G~~~iKlKi~~------------~~~~~-v~~ir 161 (342)
T 2okt_A 122 YGATAS--------------GL-SN-KQLE----------SL-KATKPTRIKLKWTP------------QIMHQ-IRVLR 161 (342)
T ss_dssp CEEEES--------------SC-CH-HHHH----------HH-HHHCCSEEEEECCT------------THHHH-HHHHT
T ss_pred CCCCCC--------------CH-HH-HHHH----------HH-HHCCCCEEEEECCC------------CHHHH-HHHHH
T ss_conf 475565--------------20-39-9999----------99-97398789995683------------33999-99865
Q ss_pred HCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCE
Q ss_conf 53853111023431104653202785111146865687899999998765448699776763104237998864238836
Q gi|254780670|r 226 KAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNC 305 (424)
Q Consensus 226 ~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~ 305 (424)
++ |.++.|.+|+ ++.| +.++... +. .+++|.|.+||+|+. |++++.++.++.+ +
T Consensus 162 ~~----~~~~~l~vDa-------N~~~---------~~~~a~~-~~-~l~~~~i~~iEqP~~--~~~~~~~l~~~~~--i 215 (342)
T 2okt_A 162 EL----DFHFQLVIDA-------NESL---------DRQDFTQ-LQ-LLAREQVLYIEEPFK--DISMLDEVADGTI--P 215 (342)
T ss_dssp TS----SSCCEEEEEC-------TTCC---------CGGGHHH-HH-HHGGGCEEEEECCCS--SGGGGGGSCTTSS--C
T ss_pred HC----CCCCCEECCC-------CCCC---------CHHHHHH-HH-HHHHCCCEEEECCCC--CHHHHHHHHHCCC--C
T ss_conf 13----8875641161-------0366---------6689999-99-752147324207798--8899999985589--8
Q ss_pred EEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHH
Q ss_conf 850430000214888521003865223425453003899999999999879869995078887235899899981
Q gi|254780670|r 306 QLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVAT 380 (424)
Q Consensus 306 ~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~ 380 (424)
.|..|.- ++++.-+.+.++.++++.+.+||..+|.+|++++.+.+|+.+|..++++. +-||.=..-+-+.+|.
T Consensus 216 pIa~dEs-~~~~~~~~~~~~~~a~d~v~ik~~~~GGi~~~~~i~~~A~~~gi~~~~g~-~~es~ig~~a~~~lA~ 288 (342)
T 2okt_A 216 PIALDEK-ATSLLDIINLIELYNVKVVVLKPFRLGGIDKVQTAIDTLKSHGAKVVIGG-MYEYGLSRYFTAMLAR 288 (342)
T ss_dssp CEEESTT-CCCHHHHHHHHHHSCCCEEEECHHHHTSGGGHHHHHHHHHHTTCEEEEBC-SSCCHHHHHHHHHHHT
T ss_pred CEEECCC-CCCHHHHHHHHHCCCCCEEEECCHHHCCHHHHHHHHHHHHHCCCCEEEEC-CCCHHHHHHHHHHHHC
T ss_conf 4995899-78989999999759999899791473999999999999998799689948-3112999999999967
No 80
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=99.24 E-value=8.5e-09 Score=83.94 Aligned_cols=255 Identities=18% Similarity=0.238 Sum_probs=153.6
Q ss_pred CCEEEEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHH
Q ss_conf 84299999984897676634478664775467626898651680489999999875678975--9885578988864653
Q gi|254780670|r 17 SPTIEVDVCLEDGSTGRAMVPSGASTGIHEAFELRDQEKRYFGKGVLKAIAFVNDEIRTALL--GCDARDQLLIDKIMID 94 (424)
Q Consensus 17 ~PTvEvev~~~~g~~gra~~PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~in~~i~~~L~--g~~~~dQ~~iD~~Li~ 94 (424)
+++|.|+|.+ +|..|.+-++... |.|..+..+++.+. +.+. +.++.+-. +.+..
T Consensus 26 ~~~v~v~i~~-dG~~G~GE~~~~~----------------~~~et~~~~~~~l~----~~~~~~~~~~~~~~---~~~~~ 81 (338)
T 3ijl_A 26 TPDVQVEIEY-EGVTGYGEASMPP----------------YLGETVESVMNFLK----KVNLEQFSDPFQLE---DILSY 81 (338)
T ss_dssp ECEEEEEEEE-TTEEEEEEEECCG----------------GGSCCHHHHHHHHT----TCCCTTCCCTTCHH---HHHHH
T ss_pred EEEEEEEEEE-CCEEEEEEECCCC----------------CCCCHHHHHHHHHH----HHHHHHCCCHHHHH---HHHHH
T ss_conf 9899999998-9979998603888----------------76003999999999----73134169976799---99999
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCHH
Q ss_conf 03664322123222202448998752663498488822532456475430000036645567766102565148877489
Q gi|254780670|r 95 LDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNILNGGIHADNALDFQEFMIMPVGAENIR 174 (424)
Q Consensus 95 lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~NiinGG~HA~~~l~iQEfmIiP~g~~sf~ 174 (424)
++... .....+.-|+.+|++-+.++..++|+|+.|++.....+|.- ...| ..+ .
T Consensus 82 ~~~~~---~~~~~a~said~ALwDl~gk~~~~pv~~lLGg~~~~~~~~~---~~~~-------------------~~~-~ 135 (338)
T 3ijl_A 82 VDSLS---PKDTAAKAAVDIALHDLVGKLLGAPWYKIWGLNKEKTPSTT---FTIG-------------------IDT-P 135 (338)
T ss_dssp HHHTC---SCCHHHHHHHHHHHHHHHHHHHTSBHHHHTTCCGGGCCBBC---CBCC-------------------CCC-H
T ss_pred HHHHC---CCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCEECC---CCCC-------------------CCC-H
T ss_conf 87614---45568999999999998620025756664476544300011---2334-------------------785-9
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHCCCCC
Q ss_conf 99899999999999875200001---367655764488684689999999999753853111023431104653202785
Q gi|254780670|r 175 EAIRMGAEVFHTLKKELKSKGYS---TNVGDEGGFSPNLKTADSALDLIANSIEKAGYNAGKDLLIALDCAASAFFKKEK 251 (424)
Q Consensus 175 eal~~~~ev~~~lk~~L~~~g~~---t~vgDEGGfap~~~~~eeaL~ll~eAi~~aGy~~g~di~i~lD~AAsefy~~~k 251 (424)
+.++. ..+.+ .+|+. ..+|. +...+.++ ++..+ .++.|.+|+ ++.
T Consensus 136 ~~~~~-------~~~~~-~~Gf~~~Kikvg~--------~~~~~~~~----~i~~~-----~~~~l~vDa-------N~~ 183 (338)
T 3ijl_A 136 DVVRA-------KTKEC-AGLFNILKVKLGR--------DNDKEMIE----TIRSV-----TDLPIAVDA-------NQG 183 (338)
T ss_dssp HHHHH-------HHHHH-HTTCSSEEEECSS--------SCHHHHHH----HHHTT-----CCCCEEEEC-------TTC
T ss_pred HHHHH-------HHHHH-HHCCCEECCCCCC--------CCHHHHHH----HHHHC-----CCCCEEEEC-------CCC
T ss_conf 99999-------99998-7217611034688--------51799999----99730-----355468740-------578
Q ss_pred EEECCCCCCCCH-HHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCEEECCHHHHHHHHHCCCCC
Q ss_conf 111146865687-8999999987654486997767631042379988642388368504300002148885210038652
Q gi|254780670|r 252 YILKGENLELQP-NEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQLVGDDLFVTNPERLHKGINEEVAN 330 (424)
Q Consensus 252 Y~~~~~~~~~t~-~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~IvGDDL~vTn~~rl~~gi~~~~~N 330 (424)
.+. ++-+++ .+.+++|.|.++|+|+..+|++++.++....+ +-|..|.-..+.....+. .+++.
T Consensus 184 ---------~~~~~~A~~~-~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~--ipia~dE~~~~~~~~~~~---~~~~d 248 (338)
T 3ijl_A 184 ---------WKDRQYALDM-IHWLKEKGIVMIEQPMPKEQLDDIAWVTQQSP--LPVFADESLQRLGDVAAL---KGAFT 248 (338)
T ss_dssp ---------CCCHHHHHHH-HHHHHHTTEEEEECCSCTTCHHHHHHHHHTCS--SCEEESTTCCSGGGTGGG---BTTBS
T ss_pred ---------CCCHHHHHHH-HHHHHHCCCEEEECCCCCCCHHHHHHHHCCCC--CCEEECCCCCCHHHHHHH---HCCCC
T ss_conf ---------6719999998-64344238500214657434777755412679--868957898999999987---27565
Q ss_pred EEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC
Q ss_conf 234254530038999999999998798699950788872
Q gi|254780670|r 331 AILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETE 369 (424)
Q Consensus 331 ailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETe 369 (424)
.+.+|+...|.+|+++..+.+|+.+|..++++ ...|+.
T Consensus 249 ~~~~~~~~~GGi~~~~~i~~~a~~~gi~~~~~-~~~~~~ 286 (338)
T 3ijl_A 249 GINIKLMKCTGMREAWKMVTLAHALGMRVMVG-CMTETS 286 (338)
T ss_dssp EEEECHHHHTSHHHHHHHHHHHHHTTCEEEEC-CCSCCH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEC-CCHHHH
T ss_conf 51235333682799999999999869969988-805769
No 81
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=99.06 E-value=6.2e-09 Score=84.94 Aligned_cols=145 Identities=14% Similarity=0.187 Sum_probs=109.0
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHH---CCEEEEECCCCC
Q ss_conf 46899999999997538531110234311046532027851111468656878999999987654---486997767631
Q gi|254780670|r 212 TADSALDLIANSIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQ---YPIYSIEDGMSE 288 (424)
Q Consensus 212 ~~eeaL~ll~eAi~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~---yPI~sIEDP~~e 288 (424)
+.++-++.+....+.. |.++.|.+|+ + ...+.++-+.+...| ++ ++|.+||+|+..
T Consensus 143 ~~~~d~~~v~~vr~~~----g~~~~l~vDa-------N---------~~w~~~~A~~~~~~L-~~~~~~~i~~iEqP~~~ 201 (332)
T 2ozt_A 143 SPEEEQAILKALLAAL----PPGAKLRLDA-------N---------GSWDRATANRWFAWL-DRHGNGKIEYVEQPLPP 201 (332)
T ss_dssp CHHHHHHHHHHHHHHS----CTTCEEEEEC-------T---------TCCCHHHHHHHHHHH-HHHCCTTEEEEECCSCT
T ss_pred CHHHHHHHHHHHHHHC----CCCCEEEECC-------C---------CCCCHHHHHHHHHHH-HHHCCCCCEEEECCCCC
T ss_conf 1688999999999855----9875166578-------7---------883789999999999-97367781798467787
Q ss_pred CCHHHHHHHHHHCCCCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCC
Q ss_conf 04237998864238836850430000214888521003865223425453003899999999999879869995078887
Q gi|254780670|r 289 DDWHGWKILTNKIGSNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGET 368 (424)
Q Consensus 289 ~D~~gw~~l~~~~g~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGET 368 (424)
+||++...|.++.+ +-|..|.- ++.+.-+.+.++.+++..+.|||...|.+ ++++.+..|+.+|..+|+|+-- ||
T Consensus 202 ~d~~~l~~l~~~~~--ipIa~DEs-~~~~~d~~~~i~~~a~d~v~iK~~~~GGi-~~~~~~~~a~~~~~~~~i~s~~-Es 276 (332)
T 2ozt_A 202 DQWQALLSLAQTVT--TAIALDES-VVSAAEVQRWVDRGWPGFFVIKTALFGDP-DSLSLLLRRGLEPQRLVFSSAL-EG 276 (332)
T ss_dssp TCHHHHHHHHHHCS--SCEEESTT-CCSHHHHHHHHHTTCCSEEEECHHHHSCH-HHHHHHHHTTCCGGGEEEBCCS-CC
T ss_pred CCCHHHHHHHHCCC--CCEEECCC-CCCHHHHHHHHHCCCCCEEEECCHHCCCH-HHHHHHHHHHHCCCCEEEECCH-HH
T ss_conf 64348886765499--97893788-89999999999769999999897303999-9999999998759968998952-37
Q ss_pred CH--HHHHHHHHHHCC
Q ss_conf 23--589989998199
Q gi|254780670|r 369 ED--HTIADLAVATNC 382 (424)
Q Consensus 369 eD--~~iaDLAVg~~a 382 (424)
.= ...+|||-.++.
T Consensus 277 ~ig~~a~~hlaa~~~~ 292 (332)
T 2ozt_A 277 AIARTAIFHLLETWQP 292 (332)
T ss_dssp HHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHCCC
T ss_conf 9999999999984899
No 82
>3caw_A O-succinylbenzoate synthase; structural genomics, PSI-2, NYSGXRC, target 9462A, protein structure initiative; 1.87A {Bdellovibrio bacteriovorus HD100}
Probab=98.56 E-value=3e-05 Score=57.64 Aligned_cols=240 Identities=15% Similarity=0.121 Sum_probs=141.8
Q ss_pred CCEEEEEEEECCCCEEEEEC-CCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
Q ss_conf 84299999984897676634-47866477546762689865168048999999987567897598855789888646530
Q gi|254780670|r 17 SPTIEVDVCLEDGSTGRAMV-PSGASTGIHEAFELRDQEKRYFGKGVLKAIAFVNDEIRTALLGCDARDQLLIDKIMIDL 95 (424)
Q Consensus 17 ~PTvEvev~~~~g~~gra~~-PSGaStG~~Ea~elrD~~~~~~G~gV~~Av~~in~~i~~~L~g~~~~dQ~~iD~~Li~l 95 (424)
+.+|-|.|.+++|.+|.+-+ |- +.|.......++..+. +.
T Consensus 26 re~~lv~v~~~~G~~G~GE~aP~----------------p~~~~etl~~~l~~l~-----------------------~~ 66 (330)
T 3caw_A 26 REGVLLKVEWNDGLYGFADLHPW----------------PELGDLSLEEQLSDLR-----------------------MG 66 (330)
T ss_dssp EEEEEEEEECTTSCEEEEEECCC----------------GGGTCCCHHHHHHHHH-----------------------HT
T ss_pred EEEEEEEEEECCCCEEEEEECCC----------------CCCCHHHHHHHHHHHH-----------------------CC
T ss_conf 53599999989989799851588----------------7737330999999998-----------------------06
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCHHH
Q ss_conf 36643221232222024489987526634984888225324564754300000366455677661025651488774899
Q gi|254780670|r 96 DGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNILNGGIHADNALDFQEFMIMPVGAENIRE 175 (424)
Q Consensus 96 DgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~NiinGG~HA~~~l~iQEfmIiP~g~~sf~e 175 (424)
.. ..-+.-|+.+|++-+.++..++|||+.++.. ..+.+.. .......+
T Consensus 67 ~~-------~~~a~~aid~Al~Dl~~k~~~~pl~~~l~~~--------~~~~~~~-----------------~~~~~~~~ 114 (330)
T 3caw_A 67 RM-------TTQIEQSIWLARRDALLRKEKKHVFDGGEKI--------KNNYLLS-----------------HFQDLKPG 114 (330)
T ss_dssp CC-------CHHHHHHHHHHHHHHHHHHTTCBTTTTSCCC--------CBCEEEC-----------------TTSCCCTT
T ss_pred CC-------CHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC--------CCCEECC-----------------CCCHHHHH
T ss_conf 99-------8789999999875099887599425507988--------6303435-----------------78447899
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCC---CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHCCCCCE
Q ss_conf 98999999999998752000013---676557644886846899999999997538531110234311046532027851
Q gi|254780670|r 176 AIRMGAEVFHTLKKELKSKGYST---NVGDEGGFSPNLKTADSALDLIANSIEKAGYNAGKDLLIALDCAASAFFKKEKY 252 (424)
Q Consensus 176 al~~~~ev~~~lk~~L~~~g~~t---~vgDEGGfap~~~~~eeaL~ll~eAi~~aGy~~g~di~i~lD~AAsefy~~~kY 252 (424)
.++. +.++|+.+ .+|. +..+.++.+.+.. |.++.|-+|+
T Consensus 115 ~~~~-----------~~~~G~~~~KiK~g~---------~~~~~~~~i~~~~-------~~~~~l~~Da----------- 156 (330)
T 3caw_A 115 FLDG-----------LKNEGYNTVKVKMGR---------DLQKEADMLTHIA-------ASGMRMRLDF----------- 156 (330)
T ss_dssp HHHH-----------HHHHTCCEEEEECSS---------CHHHHHHHHHHHH-------HTTCEEEEEC-----------
T ss_pred HHHH-----------HHHCCCCEEEECCCC---------CHHHHHHHHHHHC-------CCCCEEEECH-----------
T ss_conf 9999-----------997498757615779---------8799999999854-------8997799623-----------
Q ss_pred EECCCCCCCCHHHHHHHHHHHHH--HCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCEEECCHHHHHHHHHCCCCC
Q ss_conf 11146865687899999998765--4486997767631042379988642388368504300002148885210038652
Q gi|254780670|r 253 ILKGENLELQPNEMASYLANLVD--QYPIYSIEDGMSEDDWHGWKILTNKIGSNCQLVGDDLFVTNPERLHKGINEEVAN 330 (424)
Q Consensus 253 ~~~~~~~~~t~~elid~y~~l~~--~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~IvGDDL~vTn~~rl~~gi~~~~~N 330 (424)
|.-+|.++-+.+...|-. +|.|.++|+|+. .|.++|..+.... .|..|.-.. +.....+...+++
T Consensus 157 -----N~~~~~~~A~~~~~~l~~~~~~~i~~iEqP~~-~d~~~~~~~~~~~----pIa~dEs~~---~~~~~~~~~~~~~ 223 (330)
T 3caw_A 157 -----NALGSWQTFEKFMVNLPLTVRPLIEYVEDPFP-FDFHAWGEARKLA----KIALDNQYD---KVPWGKIASAPFD 223 (330)
T ss_dssp -----TTCSCHHHHHHHHHTSCTTTGGGEEEEECCSS-CCHHHHHHHTTTS----CEEESTTGG---GCCTTTCSSCSCS
T ss_pred -----HHCCCHHHHHHHHHHHHHHCCCCEEECCCCCC-CCHHHHHHHHHCC----CEEEECCCC---CHHHHHHHCCCCC
T ss_conf -----33689999999999845642568134369998-4689999761089----989725324---5346676528588
Q ss_pred EEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCC-CHHHHHHHHHHHCC
Q ss_conf 23425453003899999999999879869995078887-23589989998199
Q gi|254780670|r 331 AILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGET-EDHTIADLAVATNC 382 (424)
Q Consensus 331 ailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGET-eD~~iaDLAVg~~a 382 (424)
..++||.-. ++.+.+++|+.+|+.+++++-.+-. .-..-+|||..++.
T Consensus 224 v~~~k~g~~----g~~~~~~~a~~~~~~~~~~~~~es~ig~~a~~hlaa~~~~ 272 (330)
T 3caw_A 224 VIVIKPAKT----DVDKAVAQCQKWNLKLAVTSYMDHPVGVVHAVGVAMELKD 272 (330)
T ss_dssp EEEECTTTS----CHHHHHHHHHHTTCEEEEBCCSCCHHHHHHHHHHHHHHHH
T ss_pred EEEECCCHH----HHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHCCC
T ss_conf 899877457----6999999999819977845866768999999999983665
No 83
>1r6w_A OSB synthase, O-succinylbenzoate synthase, OSBS; enolase superfamily, TIM barrel, capping alpha+beta domain, lyase; HET: 164; 1.62A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1 PDB: 1fhv_A* 1fhu_A 2ofj_A 3gc2_A*
Probab=98.27 E-value=1.2e-05 Score=60.57 Aligned_cols=144 Identities=22% Similarity=0.244 Sum_probs=102.6
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHH--HHCCEEEEECCCCCC
Q ss_conf 468999999999975385311102343110465320278511114686568789999999876--544869977676310
Q gi|254780670|r 212 TADSALDLIANSIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLV--DQYPIYSIEDGMSED 289 (424)
Q Consensus 212 ~~eeaL~ll~eAi~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~--~~yPI~sIEDP~~e~ 289 (424)
+.++-+..+ +++.++. + |+.|-+|+ |.-.|.++-.++...|- .+|.|.+||+||...
T Consensus 140 ~~~~d~~~i-~~~r~~~--~--d~~l~lDA----------------N~~ws~~~a~~~~~~l~~~~~~~i~~iEqP~~~~ 198 (322)
T 1r6w_A 140 EAVRDGMVV-NLLLEAI--P--DLHLRLDA----------------NRAWTPLKGQQFAKYVNPDYRDRIAFLEEPCKTR 198 (322)
T ss_dssp CHHHHHHHH-HHHHHHC--T--TEEEEEEC----------------TTCBCHHHHHHHHHTSCTTTGGGEEEEECCBSSH
T ss_pred CHHHHHHHH-HHHHHHC--C--CCEEECCC----------------CCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCH
T ss_conf 979999999-9878757--9--94673267----------------6773599999999987664047931424877985
Q ss_pred CHHHHHHHHHHCCCCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC
Q ss_conf 42379988642388368504300002148885210038652234254530038999999999998798699950788872
Q gi|254780670|r 290 DWHGWKILTNKIGSNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETE 369 (424)
Q Consensus 290 D~~gw~~l~~~~g~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETe 369 (424)
| .+..+.++.+ +.|..|.-..+ +. ...+..+++..+.+||..+|-++++++.+++|+++|+.+++|. +-||.
T Consensus 199 d--~~~~l~~~~~--iPia~DEs~~~-~~--~~~~~~~~~~~i~iK~~k~GGi~~~~~i~~~a~~~gi~~~~~s-~~et~ 270 (322)
T 1r6w_A 199 D--DSRAFARETG--IAIAWDESLRE-PD--FAFVAEEGVRAVVIKPTLTGSLEKVREQVQAAHALGLTAVISS-SIESS 270 (322)
T ss_dssp H--HHHHHHHHHC--CCEEESGGGGS-TT--CCCCCCTTEEEEEECHHHHCCHHHHHHHHHHHHHTTCEEEEBC-SSCCH
T ss_pred H--HHHHHHHCCC--CCEEECCCCCC-HH--HHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEC-CCCHH
T ss_conf 0--8999972689--92896576687-65--8999825876046430024689999999999998499899978-63449
Q ss_pred H--HHHHHHHHHHCCCH
Q ss_conf 3--58998999819980
Q gi|254780670|r 370 D--HTIADLAVATNCGQ 384 (424)
Q Consensus 370 D--~~iaDLAVg~~a~~ 384 (424)
= ...++||-.+....
T Consensus 271 ig~~a~~~lAa~~~~~~ 287 (322)
T 1r6w_A 271 LGLTQLARIAAWLTPDT 287 (322)
T ss_dssp HHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHHHCCCCC
T ss_conf 99999999997189888
No 84
>2opj_A O-succinylbenzoate-COA synthase; TIM barrel, structural genomics, PSI-2, protein structure initiative; 1.60A {Thermobifida fusca YX} PDB: 2qvh_A*
Probab=98.06 E-value=0.0001 Score=53.81 Aligned_cols=124 Identities=19% Similarity=0.255 Sum_probs=94.3
Q ss_pred CCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCC
Q ss_conf 11023431104653202785111146865687899999998765448699776763104237998864238836850430
Q gi|254780670|r 232 GKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQLVGDD 311 (424)
Q Consensus 232 g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~IvGDD 311 (424)
|.++.|.+|+ +...|.++-+.+...| ++|.|.+||+|+. |++++.++....+ +-|..|.
T Consensus 122 g~~~~L~vDa----------------N~~w~~~~A~~~~~~l-~~~~i~~iEeP~~--~~~~~~~l~~~~~--iPIa~dE 180 (327)
T 2opj_A 122 GPRGRVRIDV----------------NGAWDVDTAVRMIRLL-DRFELEYVEQPCA--TVDELAEVRRRVS--VPIAADE 180 (327)
T ss_dssp CTTSEEEEEC----------------TTCSCHHHHHHHHHHH-GGGCEEEEECCSS--SHHHHHHHHHHCS--SCEEC--
T ss_pred CCCCEEEECC----------------CCCCCHHHHHHHHHHH-HHCCCEEECCCCC--HHHHHHHHHHHCC--CCEECCC
T ss_conf 9998698547----------------7898999999999986-4216103458861--1679998876379--8644487
Q ss_pred EEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHH--HHHHHHHHC
Q ss_conf 0002148885210038652234254530038999999999998798699950788872358--998999819
Q gi|254780670|r 312 LFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHT--IADLAVATN 381 (424)
Q Consensus 312 L~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~--iaDLAVg~~ 381 (424)
-. +++.-+++.++.+++..+.+|+..+|-+++++ ++|+.+|..+++++ +-|+.=.. .+|||-++.
T Consensus 181 s~-~~~~~~~~~~~~~a~di~~~k~~~~GGi~~~~---~iA~~~gi~~~~~~-~~es~ig~~a~~hlaaa~p 247 (327)
T 2opj_A 181 SI-RRAEDPLRVRDAEAADVVVLKVQPLGGVRAAL---RLAEECGLPVVVSS-AVETSVGLAAGVALAAALP 247 (327)
T ss_dssp ----------CTTTTTCCSBEEECHHHHTSHHHHH---HHHHHTCSCEEEBC-CSCCHHHHHHHHHHHHHSS
T ss_pred CC-CCHHHHHHHHHCCCCCEEEEEECCCCCHHHHH---HHHHHCCCCEEEEC-CCCCHHHHHHHHHHHHHCC
T ss_conf 64-78788999997599768986202059989999---99998299599967-8898699999999998488
No 85
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, enolase superfamily; 2.90A {Listeria innocua CLIP11262} SCOP: c.1.11.2 d.54.1.1
Probab=97.17 E-value=0.0065 Score=40.40 Aligned_cols=275 Identities=20% Similarity=0.290 Sum_probs=170.8
Q ss_pred CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 77546762689865168048999999987567897598855789888646530366432212322220244899875266
Q gi|254780670|r 43 GIHEAFELRDQEKRYFGKGVLKAIAFVNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQ 122 (424)
Q Consensus 43 G~~Ea~elrD~~~~~~G~gV~~Av~~in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~ 122 (424)
|.-||..|.| |--.....|+-.|.+.+-|.|-.......++|..+.-=+.|.+ .+--||.+|++.|.|+
T Consensus 65 geleafplpd----yteetlssailiikeqllpllaqrkirkpeeiqelfswiqgne-------makaavelavwdafak 133 (393)
T 1wuf_A 65 GELEAFPLPD----YTEETLSSAILIIKEQLLPLLAQRKIRKPEEIQELFSWIQGNE-------MAKAAVELAVWDAFAK 133 (393)
T ss_dssp EEECCCSSTT----SSSCCHHHHHHHHHHTTHHHHHHCEESSTTHHHHHHTTSCSCH-------HHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCH-------HHHHHHHHHHHHHHHH
T ss_conf 5203457997----2277775689999987778887630388799999999971438-------9999999999999998
Q ss_pred HCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 34984888225324564754300000366455677661025651488774899989999999999987520000136765
Q gi|254780670|r 123 TSNLPLYKYLGGCSAHILPVPLMNILNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYSTNVGD 202 (424)
Q Consensus 123 ~~~~pLy~yl~~~~~~~lP~P~~NiinGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t~vgD 202 (424)
..+..|-+.++.+.. ++.+-. .+..| .+.+.-++.. ..--++|+..-
T Consensus 134 mekrslakmigatke-sikvgv------------siglq---------qnvetllqlv--------nqyvdqgyerv--- 180 (393)
T 1wuf_A 134 MEKRSLAKMIGATKE-SIKVGV------------SIGLQ---------QNVETLLQLV--------NQYVDQGYERV--- 180 (393)
T ss_dssp HTTSBHHHHTTCCCS-EEEBCE------------EECCC---------SCHHHHHHHH--------HHHHHHTCCEE---
T ss_pred HHHHHHHHHHCCCHH-HEEEEE------------EEEHH---------HHHHHHHHHH--------HHHHHCCHHHE---
T ss_conf 878789998553332-355425------------64065---------4199999999--------99885312405---
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEE
Q ss_conf 57644886846899999999997538531110234311046532027851111468656878999999987654486997
Q gi|254780670|r 203 EGGFSPNLKTADSALDLIANSIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSI 282 (424)
Q Consensus 203 EGGfap~~~~~eeaL~ll~eAi~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sI 282 (424)
.=-.+|+-+- + .++|+.+.=- .++|-.-|+.-|+ ++++. +.+-.+.|.+-.|
T Consensus 181 klkiapnkdi--q----fveavrksfp------klslmadansayn--------------redfl--llkeldqydlemi 232 (393)
T 1wuf_A 181 KLKIAPNKDI--Q----FVEAVRKSFP------KLSLMADANSAYN--------------REDFL--LLKELDQYDLEMI 232 (393)
T ss_dssp EEECBTTBSH--H----HHHHHHTTCT------TSEEEEECTTCCC--------------GGGHH--HHHTTGGGTCSEE
T ss_pred EEEECCCCCH--H----HHHHHHHHCC------CCEEHHCCCCCCC--------------HHHHH--HHHHHHHHHHHHH
T ss_conf 7652688750--8----9999985386------3100103432004--------------56668--8887756508987
Q ss_pred ECCCCCCCHHHHHHHHHHCCCCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 76763104237998864238836850430000214888521003865223425453003899999999999879869995
Q gi|254780670|r 283 EDGMSEDDWHGWKILTNKIGSNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIIS 362 (424)
Q Consensus 283 EDP~~e~D~~gw~~l~~~~g~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivS 362 (424)
|.||.-.||-.-..|++.+..+ |+-|.- ....+-++++-..++|.++-+|+-.+|-+|.++.....+.-+.+.+--.
T Consensus 233 eqpfgtkdfvdhawlqkqlktr--iclden-irsvkdveqahsigscrainlklarvggmssalkiaeycalneilvwcg 309 (393)
T 1wuf_A 233 EQPFGTKDFVDHAWLQKQLKTR--ICLDEN-IRSVKDVEQAHSIGSCRAINLKLARVGGMSSALKIAEYCALNEILVWCG 309 (393)
T ss_dssp ECCSCSSCSHHHHHHHTTCSSE--EEECTT-CCSHHHHHHHHHHTCCSEEEECTGGGTSHHHHHHHHHHHHHTTCEEEEC
T ss_pred HCCCCCCHHHHHHHHHHHHHHH--EEHHCC-CCHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 4667750256679999875311--402103-3434647865133521443223665347167889998876777999955
Q ss_pred CCCCCCCH--HHHHHHHHHHCCCHHEECCCCHHHH
Q ss_conf 07888723--5899899981998010075611448
Q gi|254780670|r 363 HRSGETED--HTIADLAVATNCGQIKTGSLARSDR 395 (424)
Q Consensus 363 hRSGETeD--~~iaDLAVg~~a~~iK~G~~~R~ER 395 (424)
|-.|. ----.+|.+....|+--|-.+.+.|
T Consensus 310 ---gmleagvgrahnialaarnefvfpgdisasnr 341 (393)
T 1wuf_A 310 ---GMLEAGVGRAHNIALAARNEFVFPGDISASNR 341 (393)
T ss_dssp ---CCCCCHHHHHHHHHHHTSSSCCSCBSCCCGGG
T ss_pred ---HHHHHCCCHHHHHHHHHCCCEECCCCCCHHCC
T ss_conf ---04452444265767875145225776431000
No 86
>1wue_A Mandelate racemase/muconate lactonizing enzyme family protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis V583} SCOP: c.1.11.2 d.54.1.1
Probab=95.04 E-value=0.23 Score=28.97 Aligned_cols=266 Identities=16% Similarity=0.263 Sum_probs=159.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCC
Q ss_conf 16804899999998756789759885578988864653036643221232222024489987526634984888225324
Q gi|254780670|r 57 YFGKGVLKAIAFVNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCS 136 (424)
Q Consensus 57 ~~G~gV~~Av~~in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~ 136 (424)
|-..-.-..--.|...+-|.|+-.......++..+.-+..|-- .| --|+..|++..-|+-..+.|-++.+. .
T Consensus 75 yvqetlvterfiiqqhliplllteaieqpqevstifeevkghw----mg---kaaletaiwdlyakrqqkslteffgp-t 146 (386)
T 1wue_A 75 YVQETLVTERFIIQQHLIPLLLTEAIEQPQEVSTIFEEVKGHW----MG---KAALETAIWDLYAKRQQKSLTEFFGP-T 146 (386)
T ss_dssp SSSCCHHHHHHHHHHTHHHHHTTSCCCSTHHHHHHGGGSCSCH----HH---HHHHHHHHHHHHHHHTTSBGGGGSSS-C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH----HH---HHHHHHHHHHHHHHHHHHHHHHHHCC-C
T ss_conf 7988888999999876688999988627077889999864012----43---88899999999988876527877197-4
Q ss_pred CCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCCCCCCCCCCCHHH
Q ss_conf 5647543000003664556776610256514887748999899999999999875200001-367655764488684689
Q gi|254780670|r 137 AHILPVPLMNILNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYS-TNVGDEGGFSPNLKTADS 215 (424)
Q Consensus 137 ~~~lP~P~~NiinGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~-t~vgDEGGfap~~~~~ee 215 (424)
..++|+-. .+.|||=+ +..-..++.++ ++|+- ...- .-|..+ -+
T Consensus 147 rrkipvgi------------slgiqedl------pqllkqvqlav-----------ekgyqrvklk----irpgyd--ve 191 (386)
T 1wue_A 147 RRKIPVGI------------SLGIQEDL------PQLLKQVQLAV-----------EKGYQRVKLK----IRPGYD--VE 191 (386)
T ss_dssp CSEEECCE------------EECCCSCH------HHHHHHHHHHH-----------HTTCSCEEEE----CBTTBS--HH
T ss_pred CCCCCCEE------------EECHHHHH------HHHHHHHHHHH-----------HHCHHEEEEE----CCCCCC--CC
T ss_conf 34455304------------54105557------99999999998-----------7322237884----159987--64
Q ss_pred HHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHH
Q ss_conf 99999999975385311102343110465320278511114686568789999999876544869977676310423799
Q gi|254780670|r 216 ALDLIANSIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWK 295 (424)
Q Consensus 216 aL~ll~eAi~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~ 295 (424)
+..++..-.-+. -+-+|. +.-| +-.++-.+ .+ .+.|-+..||.||+-|||-...
T Consensus 192 pvalirqhfpnl--------plmvda-------nsay---------tladlpql-qr-ldhyqlamieqpfaaddfldha 245 (386)
T 1wue_A 192 PVALIRQHFPNL--------PLMVDA-------NSAY---------TLADLPQL-QR-LDHYQLAMIEQPFAADDFLDHA 245 (386)
T ss_dssp HHHHHHHHCTTS--------CEEEEC-------TTCC---------CGGGHHHH-HG-GGGSCCSCEECCSCTTCSHHHH
T ss_pred HHHHHHHHCCCC--------CEEEEC-------CCCC---------CHHCCHHH-HH-HHHHHHHHHCCCCCHHHHHHHH
T ss_conf 689999758998--------657615-------6422---------12126766-31-1157787763865213466589
Q ss_pred HHHHHCCCCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHH
Q ss_conf 88642388368504300002148885210038652234254530038999999999998798699950788872358998
Q gi|254780670|r 296 ILTNKIGSNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIAD 375 (424)
Q Consensus 296 ~l~~~~g~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaD 375 (424)
.++..+..++ +-|.- ....+--+.+...++|.++-+|.-.+|-+-|++..+.+++++...+-+..- =|+.-----.
T Consensus 246 qlqrelktri--clden-irslkdcqvalalgscrsinlkiprvggihealkiaafcqendllvwlggm-fesgvgraln 321 (386)
T 1wue_A 246 QLQRELKTRI--CLDEN-IRSLKDCQVALALGSCRSINLKIPRVGGIHEALKIAAFCQENDLLVWLGGM-FESGVGRALN 321 (386)
T ss_dssp HHHTTCSSCE--EECTT-CCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCC-CCCHHHHHHH
T ss_pred HHHHHHHHHC--CHHHC-CCHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHCCCCEEEEECCC-HHCCCCHHHC
T ss_conf 9999866534--23211-243665488887554320002377555488999999774236664422220-0114123431
Q ss_pred HHHHHCCCHHEECCCCHHHH
Q ss_conf 99981998010075611448
Q gi|254780670|r 376 LAVATNCGQIKTGSLARSDR 395 (424)
Q Consensus 376 LAVg~~a~~iK~G~~~R~ER 395 (424)
|-.+..-.|---|-.+..||
T Consensus 322 lqfasqptfsfpgdisater 341 (386)
T 1wue_A 322 LQFASQPTFSFPGDISATER 341 (386)
T ss_dssp HHHHTSTTCCSCCSCCCGGG
T ss_pred EEECCCCCCCCCCCCCHHHH
T ss_conf 23126876657886307788
No 87
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=85.95 E-value=1.9 Score=22.22 Aligned_cols=98 Identities=12% Similarity=0.163 Sum_probs=63.8
Q ss_pred CCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHH
Q ss_conf 68789999999876544869977676310423799886423883685043000021488852100386522342545300
Q gi|254780670|r 261 LQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIG 340 (424)
Q Consensus 261 ~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiG 340 (424)
....+..+++.+.+++|-+...-++++++.. .+....-+ +.=||- ..++|...++..-+.+. -++||-.|-+
T Consensus 95 ~g~~~~l~~l~~~~~e~gl~~~Te~~d~~~~----~~~~~~vd-~~kIga-~~~~n~~Ll~~~a~t~k--PV~lk~G~~~ 166 (298)
T 3fs2_A 95 IGLEKALEVFSDLKKEYGFPVLTDIHTEEQC----AAVAPVVD-VLQIPA-FLCRQTDLLIAAARTGR--VVNVKKGQFL 166 (298)
T ss_dssp CCHHHHHHHHHHHHHHHCCCEEEECCSHHHH----HHHTTTCS-EEEECG-GGTTCHHHHHHHHHTTS--EEEEECCTTC
T ss_pred CCHHHHHHHHHHHHHHHCCCEEEECCCHHHH----HHHHCCCC-EEEECC-CCCCCHHHHHHHHHCCC--CEEECCCCCC
T ss_conf 8889999999999998499433433668889----87502355-145333-11468799999987199--5662267889
Q ss_pred HHHHHHHHHHHHHHCCCE-EEEECCCC
Q ss_conf 389999999999987986-99950788
Q gi|254780670|r 341 SVSETLNTIEKAQMAGYP-SIISHRSG 366 (424)
Q Consensus 341 Tvset~ea~~~a~~~g~~-~ivShRSG 366 (424)
|+.|.+.+++..++.|-. +++-||-.
T Consensus 167 s~~e~~~Ave~i~~~Gn~~v~l~~rg~ 193 (298)
T 3fs2_A 167 APWDMKNVLAKITESGNPNVLATERGV 193 (298)
T ss_dssp CGGGHHHHHHHHHTTTCCCEEEEECCE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf 989998788999847986499828852
No 88
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus HB8} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=82.12 E-value=2.7 Score=21.09 Aligned_cols=30 Identities=13% Similarity=0.185 Sum_probs=20.3
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCEEEEECCCC
Q ss_conf 6865687899999998765448699776763
Q gi|254780670|r 257 ENLELQPNEMASYLANLVDQYPIYSIEDGMS 287 (424)
Q Consensus 257 ~~~~~t~~elid~y~~l~~~yPI~sIEDP~~ 287 (424)
.|..++.+++-++ .+|+++|.++-|+|-.+
T Consensus 177 TG~~~s~~~l~~l-~~~a~~~~~~ii~De~y 206 (385)
T 1b5p_A 177 TGAVYPKEVLEAL-ARLAVEHDFYLVSDEIY 206 (385)
T ss_dssp TCCCCCHHHHHHH-HHHHHHTTCEEEEECTT
T ss_pred CCCCCCHHHHHHH-HHHHHHCCCEEEEECCH
T ss_conf 6722899999999-99999859389996754
No 89
>3knz_A Putative sugar binding protein; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 2.50A {Salmonella enterica subsp}
Probab=78.02 E-value=2.3 Score=21.56 Aligned_cols=35 Identities=9% Similarity=0.091 Sum_probs=14.4
Q ss_pred HCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCC
Q ss_conf 448699776763104237998864238836850430
Q gi|254780670|r 276 QYPIYSIEDGMSEDDWHGWKILTNKIGSNCQLVGDD 311 (424)
Q Consensus 276 ~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~IvGDD 311 (424)
.+|++.+ +|-++.--+....+.++.+.++.++++.
T Consensus 272 ~~~vi~l-~~~~~~r~~~l~~~~~~~~~~v~~i~~~ 306 (366)
T 3knz_A 272 QSALIML-DPQPDARQDRLAQILGEWTPSIYRIGPQ 306 (366)
T ss_dssp TEEEEEE-CSSCCHHHHHHHHHHHHHCSCEEEEESS
T ss_pred CCEEEEE-ECCCHHHHHHHHHHHHHHCCCEEEEECC
T ss_conf 9749999-1783799999999999548968999243
No 90
>2poc_A D-fructose-6-, isomerase domain of glutamine-fructose-6- phosphate transaminase (isomerizing); glucosamine-6-phosphate synthase; HET: BG6 UD1; 1.80A {Candida albicans SC5314} PDB: 2put_A* 2puv_A* 2puw_A*
Probab=77.89 E-value=1.9 Score=22.20 Aligned_cols=11 Identities=27% Similarity=0.226 Sum_probs=7.0
Q ss_pred HHHHHHHHHHH
Q ss_conf 24489987526
Q gi|254780670|r 111 GVSLAVSKAAA 121 (424)
Q Consensus 111 AvSlA~akA~A 121 (424)
+.|+..+.+++
T Consensus 59 GsS~~aa~~~~ 69 (367)
T 2poc_A 59 GTSYHSCLATR 69 (367)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
T ss_conf 48999999999
No 91
>1moq_A Glucosamine 6-phosphate synthase; glutamine amidotransferase; HET: GLP MES; 1.57A {Escherichia coli} SCOP: c.80.1.1 PDB: 1mor_A* 1mos_A*
Probab=73.54 E-value=3.8 Score=19.92 Aligned_cols=11 Identities=18% Similarity=0.217 Sum_probs=6.1
Q ss_pred HHHHHHHHHHH
Q ss_conf 24489987526
Q gi|254780670|r 111 GVSLAVSKAAA 121 (424)
Q Consensus 111 AvSlA~akA~A 121 (424)
+.|..++.+++
T Consensus 61 GsS~~aa~~~~ 71 (368)
T 1moq_A 61 GTSYNSGMVSR 71 (368)
T ss_dssp HHHHHHHHHHH
T ss_pred CHHHHHHHHHH
T ss_conf 08999999999
No 92
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, dahps, DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=72.88 E-value=4.7 Score=19.25 Aligned_cols=93 Identities=18% Similarity=0.174 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHH
Q ss_conf 89999999876544869977676310423799886423883685043000021488852100386522342545300389
Q gi|254780670|r 264 NEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVS 343 (424)
Q Consensus 264 ~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvs 343 (424)
++=.+++.+.-++|.+--+-|..+.+..+--.. .-+=+||=+ ..++|...|+..-+ .-.-|+||-.|..++.
T Consensus 73 ~~gl~~l~~ik~~~glpv~TdVh~~~q~e~~~~----vvDilQIpA--fl~rqtdLl~aaa~--t~kpV~lKkgq~~s~~ 144 (262)
T 1zco_A 73 EKALRWMREAADEYGLVTVTEVMDTRHVELVAK----YSDILQIGA--RNSQNFELLKEVGK--VENPVLLKRGMGNTIQ 144 (262)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCCGGGHHHHHH----HCSEEEECG--GGTTCHHHHHHHTT--SSSCEEEECCTTCCHH
T ss_pred HHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHH----HCEEEEECC--HHHCHHHHHHHHHH--CCCEEEEECCCCCCHH
T ss_conf 588999998776549727985284777788740----030589572--54110699998872--4982897367777778
Q ss_pred HHHHHHHHHHHCC-CEEEEECC
Q ss_conf 9999999999879-86999507
Q gi|254780670|r 344 ETLNTIEKAQMAG-YPSIISHR 364 (424)
Q Consensus 344 et~ea~~~a~~~g-~~~ivShR 364 (424)
|.+.+++..+..| -.+++.+|
T Consensus 145 ~~~~a~eki~~~Gn~~i~l~eR 166 (262)
T 1zco_A 145 ELLYSAEYIMAQGNENVILCER 166 (262)
T ss_dssp HHHHHHHHHHTTTCCCEEEEEC
T ss_pred HHHHHHHHHHHCCCCEEEEEEC
T ss_conf 9999999998579978999972
No 93
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=72.54 E-value=4.8 Score=19.19 Aligned_cols=77 Identities=10% Similarity=0.164 Sum_probs=38.7
Q ss_pred CHHHHHHHHHHHH-HHCC-EEEEECCCCCCCHHHHHHHHHH-CCCCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCC
Q ss_conf 8789999999876-5448-6997767631042379988642-38836850430000214888521003865223425453
Q gi|254780670|r 262 QPNEMASYLANLV-DQYP-IYSIEDGMSEDDWHGWKILTNK-IGSNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQ 338 (424)
Q Consensus 262 t~~elid~y~~l~-~~yP-I~sIEDP~~e~D~~gw~~l~~~-~g~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQ 338 (424)
+.+.-.....+++ ..+| +..|--.-++--......+.+. +..++.|+|=|....+.+.++.|. ....+...|.+
T Consensus 170 ~~~~a~~~~~~~L~~~~~~~~ai~~~~D~~a~g~~~al~~~g~~~~i~v~g~d~~~~~~~~i~~g~---~~~tv~q~~~~ 246 (313)
T 3m9w_A 170 LPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISGQDADLAGIKRIAAGT---QTMTVYKPITL 246 (313)
T ss_dssp CHHHHHHHHHHHHHHTTTCCCEEEESSHHHHHHHHHHHHTTTCTTTSEECCCSCCHHHHHHHHHTS---SCCEEECCHHH
T ss_pred CHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHCCC---CEEEEECCHHH
T ss_conf 588899999999974565650899668589999999999779999856999789999999986599---65999389999
Q ss_pred HHH
Q ss_conf 003
Q gi|254780670|r 339 IGS 341 (424)
Q Consensus 339 iGT 341 (424)
+|-
T Consensus 247 ~G~ 249 (313)
T 3m9w_A 247 LAN 249 (313)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 999
No 94
>2zj3_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 1; glucosamine-6-phosphate synthase, aldose/ketose isomerase, rossmann-like fold; HET: G6P; 1.90A {Homo sapiens} PDB: 2zj4_A* 2v4m_A*
Probab=71.67 E-value=3.4 Score=20.32 Aligned_cols=29 Identities=10% Similarity=0.175 Sum_probs=11.9
Q ss_pred EEECCCCHHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf 342545300389999999999987986999
Q gi|254780670|r 332 ILIKPNQIGSVSETLNTIEKAQMAGYPSII 361 (424)
Q Consensus 332 iliK~NQiGTvset~ea~~~a~~~g~~~iv 361 (424)
+++.++. .+-..+.+.++..++.+-.+++
T Consensus 284 i~l~~~~-~~~~~~~~~~~~~~~~~~~~~~ 312 (375)
T 2zj3_A 284 IMIIMRD-HTYAKCQNALQQVVARQGRPVV 312 (375)
T ss_dssp EEEECSS-TTHHHHHHHHHHHHHTTCCCEE
T ss_pred EEEECCC-HHHHHHHHHHHHHHHCCCCEEE
T ss_conf 9996471-2578899999999976996899
No 95
>3h7i_A Ribonuclease H, RNAse H; BPT4 RNAse H, 5'-3' exonuclease, hydrolase, endonuclease; 1.50A {Enterobacteria phage T4} PDB: 2ihn_A 3h8w_A 3h8j_A 1tfr_A 3h8s_A
Probab=70.28 E-value=2.8 Score=20.96 Aligned_cols=77 Identities=16% Similarity=0.212 Sum_probs=48.6
Q ss_pred CHHHHHCHHHHHHCCCCCE-EECCCCCCCCHHH-----------HHHHHHHHHHHCCEEEEECCCCC-CCHHH-HHHHHH
Q ss_conf 0234311046532027851-1114686568789-----------99999987654486997767631-04237-998864
Q gi|254780670|r 234 DLLIALDCAASAFFKKEKY-ILKGENLELQPNE-----------MASYLANLVDQYPIYSIEDGMSE-DDWHG-WKILTN 299 (424)
Q Consensus 234 di~i~lD~AAsefy~~~kY-~~~~~~~~~t~~e-----------lid~y~~l~~~yPI~sIEDP~~e-~D~~g-w~~l~~ 299 (424)
+|.++.|+....+|..+-| .|+. ++..++++ +..+...+.+.+|+..++-|-.| ||.-+ +.+-..
T Consensus 65 ~ivv~~D~~~~~~wR~~iyp~YKa-nR~~~~~~~~~~~~~~~~~~~~i~~el~~~~~i~~~~~~g~EADDiIa~l~~~~~ 143 (305)
T 3h7i_A 65 KIVLCIDNAKSGYWRRDFAYYYKK-NRGKAREESTWDWEGYFESSHKVIDELKAYMPYIVMDIDKYEANDHIAVLVKKFS 143 (305)
T ss_dssp EEEEECCCCTTCCHHHHHSTTTTH-HHHHHHHHCSSCHHHHHHHHHHHHHHHHHHSSSEEECCTTCCHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCCCCHHHCCHHHHH-CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 499999799999635243887751-7998852211317899999999999999863942246788155789999999887
Q ss_pred HCCCCEEEECCC
Q ss_conf 238836850430
Q gi|254780670|r 300 KIGSNCQLVGDD 311 (424)
Q Consensus 300 ~~g~~~~IvGDD 311 (424)
.-+.++.||..|
T Consensus 144 ~~~~~v~IvS~D 155 (305)
T 3h7i_A 144 LEGHKILIISSD 155 (305)
T ss_dssp HTTCCEEEECSS
T ss_pred HCCCCEEEEECC
T ss_conf 639845999178
No 96
>3fxa_A SIS domain protein; YP_013136.1, putative sugar-phosphate isomerase, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=68.99 E-value=5 Score=19.08 Aligned_cols=53 Identities=23% Similarity=0.198 Sum_probs=39.4
Q ss_pred CEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCC
Q ss_conf 22342545300389999999999987986999507888723589989998199
Q gi|254780670|r 330 NAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVATNC 382 (424)
Q Consensus 330 NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~~a 382 (424)
+-++|=..+-|.-.|++++++.|++.|..+|.=....++.-.-.||..+-+..
T Consensus 93 ~Dv~I~iS~SG~t~e~i~~~~~ak~~g~~vI~IT~~~~s~la~~ad~~l~~~~ 145 (201)
T 3fxa_A 93 EDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSV 145 (201)
T ss_dssp TCEEEEECSSSCCHHHHTTHHHHHHHTCEEEEEESCTTSHHHHHCSEEEECCC
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEECCC
T ss_conf 88899878999957899999999983980899836899975344786786561
No 97
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=68.50 E-value=5.8 Score=18.59 Aligned_cols=28 Identities=14% Similarity=0.375 Sum_probs=15.0
Q ss_pred CCCCCHHHHHHHHHHHHHHCCEEEEECCC
Q ss_conf 86568789999999876544869977676
Q gi|254780670|r 258 NLELQPNEMASYLANLVDQYPIYSIEDGM 286 (424)
Q Consensus 258 ~~~~t~~elid~y~~l~~~yPI~sIEDP~ 286 (424)
|..++.+++-++ .+|+.+|.++-|+|-.
T Consensus 177 G~~~s~~~~~~l-~~~~~~~~~~vI~De~ 204 (388)
T 1j32_A 177 GMVYTPDEVRAI-AQVAVEAGLWVLSDEI 204 (388)
T ss_dssp CCCCCHHHHHHH-HHHHHHHTCEEEEECT
T ss_pred CCCCCHHHHHHH-HHHCCCCCEEEECCCC
T ss_conf 734889999999-9630027876622341
No 98
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transferase; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=68.26 E-value=5.9 Score=18.55 Aligned_cols=93 Identities=12% Similarity=0.128 Sum_probs=44.9
Q ss_pred CCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCC-CEEEECCCEEECCHHHHHHHHHCCCCCEEEECCC
Q ss_conf 656878999999987654486997767631042379988642388-3685043000021488852100386522342545
Q gi|254780670|r 259 LELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGS-NCQLVGDDLFVTNPERLHKGINEEVANAILIKPN 337 (424)
Q Consensus 259 ~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~-~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~N 337 (424)
..++.+++.++ .+.|++..|..+-.||+++..+ +...++- -.-|-.-|+ ||...|++..+.+ .-++|-.
T Consensus 86 ~el~~~~~~~l-~~~~k~~gi~f~~t~fd~~sv~----~l~~~~~~~~KIaS~~~--~n~~Li~~i~~~~--kpiiiSt- 155 (349)
T 2wqp_A 86 CALNEEDEIKL-KEYVESKGMIFISTLFSRAAAL----RLQRMDIPAYKIGSGEC--NNYPLIKLVASFG--KPIILST- 155 (349)
T ss_dssp HCCCHHHHHHH-HHHHHHTTCEEEEEECSHHHHH----HHHHHTCSCEEECGGGT--TCHHHHHHHHTTC--SCEEEEC-
T ss_pred HHHHHHHHHHH-HHHHHHCCCEEEECCCCHHHHH----HHHHHCCCCEECCCHHH--CCHHHHHHHHHCC--CCEEEEC-
T ss_conf 43326899999-9998625752885036423678----87751555212152121--4089999999739--9756743-
Q ss_pred CHHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf 300389999999999987986999
Q gi|254780670|r 338 QIGSVSETLNTIEKAQMAGYPSII 361 (424)
Q Consensus 338 QiGTvset~ea~~~a~~~g~~~iv 361 (424)
-..|..|..++++..++.+...++
T Consensus 156 G~~~~~eI~~~v~~~~~~~~~~~l 179 (349)
T 2wqp_A 156 GMNSIESIKKSVEIIREAGVPYAL 179 (349)
T ss_dssp TTCCHHHHHHHHHHHHHHTCCEEE
T ss_pred CCCHHHHHHHHHHHHHHHCCCCEE
T ss_conf 543055566789888763246313
No 99
>3g68_A Putative phosphosugar isomerase; SIS domain, double-SIS DOMA protein, structural genomics, joint center for structural G JCSG; HET: MSE CIT; 1.80A {Clostridium difficile 630}
Probab=68.13 E-value=4.9 Score=19.11 Aligned_cols=13 Identities=23% Similarity=0.342 Sum_probs=6.2
Q ss_pred CCCCCCCCCCCCC
Q ss_conf 1367655764488
Q gi|254780670|r 197 STNVGDEGGFSPN 209 (424)
Q Consensus 197 ~t~vgDEGGfap~ 209 (424)
..+.|.|-+.+..
T Consensus 132 ~~~~g~E~~~~~T 144 (352)
T 3g68_A 132 TVNCGEEKSGAKT 144 (352)
T ss_dssp CCCCCCCCCSSCS
T ss_pred CCCCCCCCCCCCC
T ss_conf 0254544322320
No 100
>1a0c_A Xylose isomerase; ketolisomerase, xylose metabolism, glucose-fructose interconversion, hydride transfer; 2.50A {Thermoanaerobacteriumthermosulfurigenes} SCOP: c.1.15.3 PDB: 1a0d_A 1a0e_A
Probab=65.57 E-value=6.6 Score=18.18 Aligned_cols=211 Identities=18% Similarity=0.171 Sum_probs=121.3
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC----------CCCCCCC-CCCCCHHHHHHHHHHHHHHC
Q ss_conf 610256514887748999899999999999875200001367----------6557644-88684689999999999753
Q gi|254780670|r 159 DFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYSTNV----------GDEGGFS-PNLKTADSALDLIANSIEKA 227 (424)
Q Consensus 159 ~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t~v----------gDEGGfa-p~~~~~eeaL~ll~eAi~~a 227 (424)
-|.+.=|+|.| .|++|.-+..-+|-..+|+.+.+.|..... =-.|+|. |+-+--..|.+.+.+||+-+
T Consensus 98 ~FHD~D~~p~g-~~~~e~~~~l~~i~~~~k~~~~~tGlkl~~~t~NLFs~p~f~~GA~TnpD~~Vr~~A~~~vk~aidia 176 (438)
T 1a0c_A 98 CFHDRDIAPEG-DTLRETNKNLDTIVAMIKDYLKTSKTKVLWGTANLFSNPRFVHGASTSCNADVFAYSAAQVKKALEIT 176 (438)
T ss_dssp EEEHHHHSCCC-SSHHHHHHHHHHHHHHHHHHHTTCSCEEEEEECCCSSSGGGTTCSTTCSCHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 61355568888-88899999999999999998885197220003676558224248776989899999999999999999
Q ss_pred CCCCCCCHHHHHCHHHHHHCC-CCCEEECCC-CCCCCHHHHHHHHHHHHHHCC------EEEEE-CCCCC------CCHH
Q ss_conf 853111023431104653202-785111146-865687899999998765448------69977-67631------0423
Q gi|254780670|r 228 GYNAGKDLLIALDCAASAFFK-KEKYILKGE-NLELQPNEMASYLANLVDQYP------IYSIE-DGMSE------DDWH 292 (424)
Q Consensus 228 Gy~~g~di~i~lD~AAsefy~-~~kY~~~~~-~~~~t~~elid~y~~l~~~yP------I~sIE-DP~~e------~D~~ 292 (424)
- .|...-=-||- .+.|.|... +....-+.|++.+..+++-.| -++|| -|... -||.
T Consensus 177 ~---------~LGa~~~v~WgGrEGyd~~~~~D~~~~~d~l~~~l~~~~dy~~~iG~~~~~~IEpKP~EP~~h~~~~d~g 247 (438)
T 1a0c_A 177 K---------ELGGENYVFWGGREGYETLLNTDMEFELDNFARFLHMAVDYAKEIGFEGQFLIEPKPKEPTKHQYDFDVA 247 (438)
T ss_dssp H---------HTTCSEEEECCTTSEESCGGGCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECCCSCSSSSEESSCSHH
T ss_pred H---------HCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEECCCHH
T ss_conf 9---------8299779966887664674436999999999999999999988548873799614899865315447899
Q ss_pred HHHHHHHHCC--CCEEEECC--C-EE-ECCHH-HHHHHHHCCCCCEEEEC---------CCCHHH--HHHHHHHHHHHHH
Q ss_conf 7998864238--83685043--0-00-02148-88521003865223425---------453003--8999999999998
Q gi|254780670|r 293 GWKILTNKIG--SNCQLVGD--D-LF-VTNPE-RLHKGINEEVANAILIK---------PNQIGS--VSETLNTIEKAQM 354 (424)
Q Consensus 293 gw~~l~~~~g--~~~~IvGD--D-L~-vTn~~-rl~~gi~~~~~NailiK---------~NQiGT--vset~ea~~~a~~ 354 (424)
.--.|..++| ++..|-=| . +. -.|+. -+..+...+.--++=+. .-|.++ .-.++-.+.+.+.
T Consensus 248 tal~fl~~~gl~~~~gvniE~gHa~mAG~n~~h~ia~a~~~gkLg~idlN~g~~~~g~D~d~F~~~~~~~~~~~~~iLe~ 327 (438)
T 1a0c_A 248 NVLAFLRKYDLDKYFKVNIEANHATLAFHDFQHELRYARINGVLGSIDANTGDMLLGWDTDQFPTDIRMTTLAMYEVIKM 327 (438)
T ss_dssp HHHHHHHHTTCTTTEEEEEEHHHHHHTTCCHHHHHHHHHHTTCEEEEECCBCCTTSBSCCCBCCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCCEEEECCCCHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 99999998288522535202154855789889999999977986606569998777767654776439999999999996
Q ss_pred CCCEE-------EEECCCCCCCHHHHHHHHHH
Q ss_conf 79869-------99507888723589989998
Q gi|254780670|r 355 AGYPS-------IISHRSGETEDHTIADLAVA 379 (424)
Q Consensus 355 ~g~~~-------ivShRSGETeD~~iaDLAVg 379 (424)
.|+.. -+-+.|-+.+|-|++|++--
T Consensus 328 gG~~~Gg~nfDak~rr~s~d~edl~~ahi~gm 359 (438)
T 1a0c_A 328 GGFDKGGLNFDAKVRRASFEPEDLFLGHIAGM 359 (438)
T ss_dssp TSCSSCCEEECCCCCTTCCSTHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 69888763446766556788267789877579
No 101
>2ddz_A 190AA long hypothetical protein; hexamer, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.24A {Pyrococcus horikoshii OT3} SCOP: d.104.1.4
Probab=63.94 E-value=2.4 Score=21.39 Aligned_cols=93 Identities=20% Similarity=0.130 Sum_probs=53.6
Q ss_pred CHHHHHHCCCCCEEECCCC-CCCCHHHHHHHHHHHHHHCCEEE------EECCCCCCCHHHH---HHH--------HHHC
Q ss_conf 1046532027851111468-65687899999998765448699------7767631042379---988--------6423
Q gi|254780670|r 240 DCAASAFFKKEKYILKGEN-LELQPNEMASYLANLVDQYPIYS------IEDGMSEDDWHGW---KIL--------TNKI 301 (424)
Q Consensus 240 D~AAsefy~~~kY~~~~~~-~~~t~~elid~y~~l~~~yPI~s------IEDP~~e~D~~gw---~~l--------~~~~ 301 (424)
-+|=..|-..+.-...+-+ ...+.+.|+|+ ++...+-||.| |-.-|+..|..+- +.| -...
T Consensus 24 ~wAy~~F~i~~dsIV~FrGp~~V~~e~miDl-eD~~~~~~I~S~dmihFivEhfd~~dl~~a~~rQRLl~~i~~e~L~~~ 102 (190)
T 2ddz_A 24 HWAYRNFGILGDSLVVFRGKCNVKVEEMVDI-EDLRLRKEIKGDDMVHYILELFWHPDILLASSLQKLLIARLVELLWNY 102 (190)
T ss_dssp THHHHHHCCCSSEEEEEEEEEECCGGGCCBH-HHHHTTCCCEEEEEEEEEEEECSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHCCCCCCCEEEEECCCCCCHHHCCCH-HHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 7778861856686899963415068877338-775068851472313788872798668899999999999999999975
Q ss_pred CCCEEEECCCEEECCHHHHHHHHHCCCCCEEEE
Q ss_conf 883685043000021488852100386522342
Q gi|254780670|r 302 GSNCQLVGDDLFVTNPERLHKGINEEVANAILI 334 (424)
Q Consensus 302 g~~~~IvGDDL~vTn~~rl~~gi~~~~~Naili 334 (424)
|.++.--|||||+ |-+.+.-.|...+.++.+|
T Consensus 103 g~~~~r~GDDLyv-~~~KlSVSIAt~s~vS~kI 134 (190)
T 2ddz_A 103 GIEASRRGDDIYV-NGRKLSISIATVSPVSIKI 134 (190)
T ss_dssp TCCEEEETTEEEE-TTEECEEEEEEECSSCEEE
T ss_pred CCCEEECCCEEEE-CCCEEEEEEEECCCCCEEE
T ss_conf 9861762785788-6977899999607872589
No 102
>2bpl_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; amidotransferase, ammonia channeling, glucosamine 6- phosphate synthase; HET: F6R; 2.05A {Escherichia coli} SCOP: c.80.1.1 d.153.1.1 PDB: 1jxa_A* 2j6h_A* 2vf4_X 2vf5_X*
Probab=63.65 E-value=2.8 Score=20.89 Aligned_cols=55 Identities=25% Similarity=0.318 Sum_probs=35.3
Q ss_pred CCEEEECCCCHHHHHHHHHHHHHHHHCC-CEEEEECCCCCCCHHHHHHHHHHHCCC
Q ss_conf 5223425453003899999999999879-869995078887235899899981998
Q gi|254780670|r 329 ANAILIKPNQIGSVSETLNTIEKAQMAG-YPSIISHRSGETEDHTIADLAVATNCG 383 (424)
Q Consensus 329 ~NailiK~NQiGTvset~ea~~~a~~~g-~~~ivShRSGETeD~~iaDLAVg~~a~ 383 (424)
-|.++|=..|-|.-++|++|++.||+.| +.+|-=-..-++.=.-.+|..+-+++|
T Consensus 339 ~~~lvI~iSQSGeT~dti~Al~~ak~~G~~~ti~itn~~~S~l~~~aD~~i~~~~G 394 (608)
T 2bpl_A 339 RNSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMTNAG 394 (608)
T ss_dssp TTEEEEEEESSSCCHHHHHHHHHHHHTTCSEEEEEESSTTCHHHHHSSEEEECCCC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCEEEEECCC
T ss_conf 98589997178995789999999997299828999537898788750610664467
No 103
>3hba_A Putative phosphosugar isomerase; YP_563707.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 2.00A {Shewanella denitrificans OS217}
Probab=63.31 E-value=2.3 Score=21.60 Aligned_cols=31 Identities=19% Similarity=0.244 Sum_probs=13.2
Q ss_pred HHHHHHHHHHCCC-EEEEECCCCCCCHHHHHHH
Q ss_conf 9999999998798-6999507888723589989
Q gi|254780670|r 345 TLNTIEKAQMAGY-PSIISHRSGETEDHTIADL 376 (424)
Q Consensus 345 t~ea~~~a~~~g~-~~ivShRSGETeD~~iaDL 376 (424)
.++.++..+..|- ..+++..+.|. +..++.|
T Consensus 269 ~~~~~~~~~~~g~~vi~i~~~~~~~-~~~~~pl 300 (334)
T 3hba_A 269 HVEQIANVKQRGANLIHLHQTSADI-HPRIAPL 300 (334)
T ss_dssp HHHHHHHHHHTTCCEEEEECSCTTS-CTTTHHH
T ss_pred HHHHHHHHHHCCCEEEEEECCCCCC-CHHHHHH
T ss_conf 9999999997699799983898886-8316479
No 104
>3eua_A Putative fructose-aminoacid-6-phosphate deglycase; putative phosphosugar isomerase, structural genomics, joint for structural genomics, JCSG; HET: MSE FLC; 1.90A {Bacillus subtilis}
Probab=62.18 E-value=2.6 Score=21.21 Aligned_cols=31 Identities=6% Similarity=-0.056 Sum_probs=16.2
Q ss_pred EEEECCCCHHHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 23425453003899999999999879869995
Q gi|254780670|r 331 AILIKPNQIGSVSETLNTIEKAQMAGYPSIIS 362 (424)
Q Consensus 331 ailiK~NQiGTvset~ea~~~a~~~g~~~ivS 362 (424)
-++|-++.- +.....+.++.+++.|-.+++-
T Consensus 246 v~~i~~~d~-~~~~~~~~~~~~~~~g~~~~vi 276 (329)
T 3eua_A 246 FIILLGLDE-TRPLEERALTFSKKYGKKLTVL 276 (329)
T ss_dssp EEEEECSST-THHHHHHHHHHHHHHCCCEEEE
T ss_pred EEEEECCCC-HHHHHHHHHHHHHHCCCEEEEE
T ss_conf 999966972-4789999999999739949999
No 105
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensation, amino-acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=60.87 E-value=7.9 Score=17.59 Aligned_cols=36 Identities=19% Similarity=0.249 Sum_probs=20.1
Q ss_pred EEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHH
Q ss_conf 685043000021488852100386522342545300
Q gi|254780670|r 305 CQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIG 340 (424)
Q Consensus 305 ~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiG 340 (424)
--|||++.|.+-.-.-..|+.+....=-.+.|.-+|
T Consensus 311 ~pivG~~aF~h~sGiH~~~i~k~~~~Ye~~~Pe~vG 346 (423)
T 3ivs_A 311 NYITGMCAFTHKAGIHAKAILANPSTYEILKPEDFG 346 (423)
T ss_dssp CTTTSTTTTEEECSGGGGGSSSCGGGCCSSCGGGGT
T ss_pred CCCCCCCCEEECCCCCHHHHHCCCCCCCCCCHHHHC
T ss_conf 787574114542653548773780235786979919
No 106
>1tzb_A Glucose-6-phosphate isomerase, conjectural; enzyme, crenarchaeon, hyperthermophIle, PGI family; 1.16A {Pyrobaculum aerophilum str} SCOP: c.80.1.1 PDB: 1tzc_A* 1x9h_A* 1x9i_A*
Probab=59.60 E-value=8.3 Score=17.44 Aligned_cols=20 Identities=15% Similarity=0.184 Sum_probs=6.8
Q ss_pred HHHHHHHHHHCCEEEEECCC
Q ss_conf 99999876544869977676
Q gi|254780670|r 267 ASYLANLVDQYPIYSIEDGM 286 (424)
Q Consensus 267 id~y~~l~~~yPI~sIEDP~ 286 (424)
.........+.+.+.--.++
T Consensus 171 ~~~~~~~~~~~~~~~g~~~~ 190 (302)
T 1tzb_A 171 IHKLVEEFQKRPTIIAAESM 190 (302)
T ss_dssp HHHHHHHHTTCCEEEEEGGG
T ss_pred HHHHHHHHCCCCHHCCCHHH
T ss_conf 99999874147311031143
No 107
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence of substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=57.50 E-value=8.9 Score=17.19 Aligned_cols=32 Identities=19% Similarity=0.264 Sum_probs=21.6
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCC
Q ss_conf 686568789999999876544869977676310
Q gi|254780670|r 257 ENLELQPNEMASYLANLVDQYPIYSIEDGMSED 289 (424)
Q Consensus 257 ~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~ 289 (424)
.|..++.+++.++ .+|+.+|.+.-|+|-.+.+
T Consensus 173 tG~~~s~~~~~~l-~~~a~~~~~~ii~De~Y~~ 204 (389)
T 1gd9_A 173 TGAVLTKKDLEEI-ADFVVEHDLIVISDEVYEH 204 (389)
T ss_dssp TCCCCCHHHHHHH-HHHHHHTTCEEEEECTTTT
T ss_pred CCCCCCHHHHHHH-HHHHHHCCCEEEEECCCHH
T ss_conf 1635899999999-9999986959999576444
No 108
>3fkj_A Putative phosphosugar isomerases; NP_459564.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 2.12A {Salmonella typhimurium LT2}
Probab=57.02 E-value=2 Score=22.07 Aligned_cols=21 Identities=19% Similarity=0.006 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHHHHHHCCCC
Q ss_conf 489999999875678975988
Q gi|254780670|r 61 GVLKAIAFVNDEIRTALLGCD 81 (424)
Q Consensus 61 gV~~Av~~in~~i~~~L~g~~ 81 (424)
+...+.++....++..|..++
T Consensus 19 ~~~~~~~~~~~~~~d~~~~~~ 39 (347)
T 3fkj_A 19 GMSVAHENARRIISDILGKQN 39 (347)
T ss_dssp CCCHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHCCHHHHHHHHHHHCC
T ss_conf 988731038999999985489
No 109
>2dou_A Probable N-succinyldiaminopimelate aminotransferase; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus HB8}
Probab=55.64 E-value=9.5 Score=16.98 Aligned_cols=29 Identities=10% Similarity=0.023 Sum_probs=18.8
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCEEEEECCC
Q ss_conf 686568789999999876544869977676
Q gi|254780670|r 257 ENLELQPNEMASYLANLVDQYPIYSIEDGM 286 (424)
Q Consensus 257 ~~~~~t~~elid~y~~l~~~yPI~sIEDP~ 286 (424)
.|..++.+++-+. .+++.+|.+.-|+|=.
T Consensus 171 tG~~~s~~~l~~i-~~~~~~~~~~ii~De~ 199 (376)
T 2dou_A 171 TGAVADWGYFEEA-LGLARKHGLWLIHDNP 199 (376)
T ss_dssp TCCCCCHHHHHHH-HHHHHHTTCEEEEECT
T ss_pred CCCCCCHHHHHHH-HHHHHHCCEEEEEECC
T ss_conf 8756757888999-9887627779994053
No 110
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=55.61 E-value=9.6 Score=16.98 Aligned_cols=55 Identities=13% Similarity=-0.043 Sum_probs=26.7
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCH----HHHHHHHHHHHHC--CCCHHHHCCCCCCCCCCCCCE
Q ss_conf 898886465303664322123222202----4489987526634--984888225324564754300
Q gi|254780670|r 85 QLLIDKIMIDLDGTPNKSRLGANAILG----VSLAVSKAAAQTS--NLPLYKYLGGCSAHILPVPLM 145 (424)
Q Consensus 85 Q~~iD~~Li~lDgT~nks~lGaNailA----vSlA~akA~A~~~--~~pLy~yl~~~~~~~lP~P~~ 145 (424)
...+++..-.+- ..++..++| ..+-+||+.|... +.+.+.+..+.....-++|++
T Consensus 84 ~~~v~~~~~~~~------~~~~D~IvavGGGs~iD~aK~va~~~~~~~~~~~~~~~~~~~~~~~p~i 144 (371)
T 1o2d_A 84 FDNVMKAVERYR------NDSFDFVVGLGGGSPMDFAKAVAVLLKEKDLSVEDLYDREKVKHWLPVV 144 (371)
T ss_dssp HHHHHHHHHHHT------TSCCSEEEEEESHHHHHHHHHHHHHTTSTTCCSGGGGCGGGCCCCCCEE
T ss_pred HHHHHHHHHHHH------HCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCEE
T ss_conf 999999999998------5499889982897612089999999857997144305765534678868
No 111
>3fj1_A Putative phosphosugar isomerase; YP_167080.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.75A {Silicibacter pomeroyi dss-3}
Probab=55.19 E-value=3.5 Score=20.24 Aligned_cols=30 Identities=3% Similarity=0.030 Sum_probs=12.2
Q ss_pred EEEECCCCHHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf 2342545300389999999999987986999
Q gi|254780670|r 331 AILIKPNQIGSVSETLNTIEKAQMAGYPSII 361 (424)
Q Consensus 331 ailiK~NQiGTvset~ea~~~a~~~g~~~iv 361 (424)
-+++.++.- +-....+.++..+..|-.+++
T Consensus 257 vi~l~~~~~-~~~~~~~l~~~~~~~g~~v~~ 286 (344)
T 3fj1_A 257 VLGFAAGDA-AEAPLAEIADQIAAKGATVFA 286 (344)
T ss_dssp EEECCCSST-THHHHHHHHHHHHHTTCCEEE
T ss_pred EEEEECCCH-HHHHHHHHHHHHHHCCCEEEE
T ss_conf 899967971-777899999999986998999
No 112
>3d4u_A Tafia, carboxypeptidase B2; protease-inhibitor complex, glycoprotein, hydrolase, metal-binding, metalloprotease, protease, secreted, zinc; 1.70A {Bos taurus} PDB: 3lms_A
Probab=54.27 E-value=10 Score=16.83 Aligned_cols=13 Identities=15% Similarity=0.069 Sum_probs=6.3
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 4899999998756
Q gi|254780670|r 61 GVLKAIAFVNDEI 73 (424)
Q Consensus 61 gV~~Av~~in~~i 73 (424)
|+..++..+...+
T Consensus 73 g~~~~l~~i~~L~ 85 (309)
T 3d4u_A 73 SPAFCLWFVGSVT 85 (309)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
T ss_conf 8999999999999
No 113
>3nft_A Translocator protein BIPD; virulence, translocation, transport protein; 1.51A {Burkholderia pseudomallei} PDB: 2ixr_A 2j9t_A* 2izp_A
Probab=54.07 E-value=10 Score=16.81 Aligned_cols=115 Identities=21% Similarity=0.471 Sum_probs=61.0
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-CCCCCCCCHHHHHCHHHHHHCCC--------CCEEECCC--CCCCCH
Q ss_conf 00136765576448868468999999999975-38531110234311046532027--------85111146--865687
Q gi|254780670|r 195 GYSTNVGDEGGFSPNLKTADSALDLIANSIEK-AGYNAGKDLLIALDCAASAFFKK--------EKYILKGE--NLELQP 263 (424)
Q Consensus 195 g~~t~vgDEGGfap~~~~~eeaL~ll~eAi~~-aGy~~g~di~i~lD~AAsefy~~--------~kY~~~~~--~~~~t~ 263 (424)
+...+.|++||-.| +..|.-|.+-|.. .+| .|++=-+--.+++||.. .+|.-.++ +..++.
T Consensus 106 ~~~~~~~~~~~~~~-----~~~~~~~~~~i~~gksd---lD~Ya~Ivk~yT~yyQdfn~~lSkLs~~IsaG~DgnIkfd~ 177 (303)
T 3nft_A 106 GTLDTAGDEGGIQP-----DPILQGLVDVIGQGKSD---IDAYATIVEGLTKYFQSVADVMSKLQDYISAKDDKNMKIDG 177 (303)
T ss_dssp C---------CCCC-----CHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHGGGGEEEETTTEEEECH
T ss_pred CCCCCCCCCCCCCC-----CHHHHHHHHHHHCCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECH
T ss_conf 66765334589997-----47999999999736411---47999999999999999999999986242469998154468
Q ss_pred HHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCEEECCHHHHHHH
Q ss_conf 899999998765448699776763104237998864238836850430000214888521
Q gi|254780670|r 264 NEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQLVGDDLFVTNPERLHKG 323 (424)
Q Consensus 264 ~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~IvGDDL~vTn~~rl~~g 323 (424)
+.|..-|.+++++||.+..- ...+.+.|.+ +|+.-.-+-++-...-|+.-+.+-
T Consensus 178 ~slk~~l~~~idky~~~~~p---s~~ea~~W~k---eLg~~f~V~~sG~I~In~d~l~km 231 (303)
T 3nft_A 178 GKIKALIQQVIDHLPTMQLP---KGADIARWRK---ELGDAVSISDSGVVTINPDKLIKM 231 (303)
T ss_dssp HHHHHHHHHHHHTCCEEECC---TTCCHHHHHH---HHCTTEEECTTCEEEECCHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCC---CHHHHHHHHH---HCCCCCCCCCCCEEEECCHHHHHH
T ss_conf 99999999999970246775---7347999999---728986668981389716057775
No 114
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structural genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=53.93 E-value=10 Score=16.79 Aligned_cols=81 Identities=11% Similarity=0.112 Sum_probs=45.2
Q ss_pred CCCHHHHHHHHHHHHHHCC-EEEEECCCCCCCHHHHHHHHHHC--CCCEEEECCCEEECCHHHHHHHHHCCCCCEEEECC
Q ss_conf 5687899999998765448-69977676310423799886423--88368504300002148885210038652234254
Q gi|254780670|r 260 ELQPNEMASYLANLVDQYP-IYSIEDGMSEDDWHGWKILTNKI--GSNCQLVGDDLFVTNPERLHKGINEEVANAILIKP 336 (424)
Q Consensus 260 ~~t~~elid~y~~l~~~yP-I~sIEDP~~e~D~~gw~~l~~~~--g~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~ 336 (424)
..+.++-.....+|+.++| +-.|--.- .....|-.+..+.. .+++.|+|=|......+.|+.|. ...++.--|
T Consensus 170 ~~~~~~~~~~~~~~l~~~p~~daI~~~~-d~~a~ga~~A~~~~g~~~~i~vvg~D~~~~~~~~i~~G~---i~~tv~q~~ 245 (303)
T 3d02_A 170 AESVDDSRRTTLDLMKTYPDLKAVVSFG-SNGPIGAGRAVKEKRAKNKVAVYGMMIPSQAASLIKSGD---ITEGITYDP 245 (303)
T ss_dssp TTCHHHHHHHHHHHHHHCTTEEEEEESS-TTHHHHHHHHHHHTTCTTTCEEEECCCHHHHHHHHHHTS---SCEEEECCH
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCC---CEEEEECCH
T ss_conf 6666999999999997299972999889-779999999999769999829999998699999997599---779994599
Q ss_pred CCHHHHHH
Q ss_conf 53003899
Q gi|254780670|r 337 NQIGSVSE 344 (424)
Q Consensus 337 NQiGTvse 344 (424)
-++|-++-
T Consensus 246 ~~~G~~a~ 253 (303)
T 3d02_A 246 ATAGYALA 253 (303)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
T ss_conf 99999999
No 115
>3ksm_A ABC-type sugar transport system, periplasmic component; PSI- II, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis kctc 2396}
Probab=52.97 E-value=10 Score=16.69 Aligned_cols=76 Identities=14% Similarity=0.233 Sum_probs=41.5
Q ss_pred CCHHHHHHHHHHHHHHCC-EEEEECCCCCCCHH--HHHHHHHHCC--CCEEEECCCEEECCHHHHHHHHHCCCCC-EEEE
Q ss_conf 687899999998765448-69977676310423--7998864238--8368504300002148885210038652-2342
Q gi|254780670|r 261 LQPNEMASYLANLVDQYP-IYSIEDGMSEDDWH--GWKILTNKIG--SNCQLVGDDLFVTNPERLHKGINEEVAN-AILI 334 (424)
Q Consensus 261 ~t~~elid~y~~l~~~yP-I~sIEDP~~e~D~~--gw~~l~~~~g--~~~~IvGDDL~vTn~~rl~~gi~~~~~N-aili 334 (424)
.+.++-.+...+++.++| +-.| |.-+|.. |........| +++.|+|=|........++.+ ... .+..
T Consensus 169 ~~~~~~~~~~~~~l~~~~~~~ai---~~~~d~~a~g~~~a~~~~g~~~~i~vvg~d~~~~~~~~i~~g----~~~~ti~q 241 (276)
T 3ksm_A 169 DDRGAARSEMLRLLKETPTIDGL---FTPNESTTIGALVAIRQSGMSKQFGFIGFDQTEELEAAMYAG----EISNLVVQ 241 (276)
T ss_dssp SSHHHHHHHHHHHHHHCSCCCEE---ECCSHHHHHHHHHHHHHTTCTTSSEEEEESCCHHHHHHHHTT----SSSEEEEC
T ss_pred HHHHHHHHHHHHHHHCCCCCEEE---ECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCC----CCEEEEEC
T ss_conf 23478999988765128985044---237829999999999976999981899878979999998759----95399958
Q ss_pred CCCCHHHHH
Q ss_conf 545300389
Q gi|254780670|r 335 KPNQIGSVS 343 (424)
Q Consensus 335 K~NQiGTvs 343 (424)
.|.++|-.+
T Consensus 242 ~~~~~g~~a 250 (276)
T 3ksm_A 242 NPEYMGYLA 250 (276)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
T ss_conf 999999999
No 116
>2kw6_A Cyclin-dependent kinase 2-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=51.37 E-value=4 Score=19.77 Aligned_cols=23 Identities=43% Similarity=0.759 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHHC--CCCCCH
Q ss_conf 99999999999983110--455762
Q gi|254780670|r 396 IAKYNQLIRIEESLGKQ--AKFAGR 418 (424)
Q Consensus 396 ~aKyNrLlrIee~Lg~~--a~~~g~ 418 (424)
-+||.+||.+=||||.. ..|+|-
T Consensus 10 qsKY~~LL~vIeEmgkdIrpTYaGs 34 (65)
T 2kw6_A 10 HSKYAELLAIIEELGKEIRPTYAGS 34 (65)
T ss_dssp SCHHHHHHHHHHHHTTTHHHHHTTC
T ss_pred HHHHHHHHHHHHHHCCCCCCHHCCC
T ss_conf 8789999999999825565043137
No 117
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=50.58 E-value=11 Score=16.43 Aligned_cols=77 Identities=10% Similarity=0.141 Sum_probs=43.1
Q ss_pred CCHHHHHHHHHHHHHHCC-EEEEECCCCCCCHHHHHHHHHHCC--CCEEEECCCEEECCHHHHHHHHHCCCCC-EEEECC
Q ss_conf 687899999998765448-699776763104237998864238--8368504300002148885210038652-234254
Q gi|254780670|r 261 LQPNEMASYLANLVDQYP-IYSIEDGMSEDDWHGWKILTNKIG--SNCQLVGDDLFVTNPERLHKGINEEVAN-AILIKP 336 (424)
Q Consensus 261 ~t~~elid~y~~l~~~yP-I~sIEDP~~e~D~~gw~~l~~~~g--~~~~IvGDDL~vTn~~rl~~gi~~~~~N-ailiK~ 336 (424)
.+.+.-......++.++| +..|--..+.-- .|..+..+..| .++.|+|-|........|+.|. -. .+.--|
T Consensus 164 ~~~~~~~~~~~~~l~~~~~i~~i~~~~d~~a-~ga~~Al~~~g~~~~i~i~g~d~~~~~~~~i~~G~----~~atv~q~~ 238 (313)
T 2h3h_A 164 EDGARAVSLAEAALNAHPDLDAFFGVYAYNG-PAQALVVKNAGKVGKVKIVCFDTTPDILQYVKEGV----IQATMGQRP 238 (313)
T ss_dssp SCHHHHHHHHHHHHHHCTTCCEEEECSTTHH-HHHHHHHHHTTCTTTSEEEEECCCHHHHHHHHHTS----CSEEEECCH
T ss_pred CCHHHHHHHHHHHHHHCCCCCEEEECCCHHH-HHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHCCC----CEEEEECCH
T ss_conf 5476789999999973989848997784689-99999999779998974799579899999998699----879980899
Q ss_pred CCHHHH
Q ss_conf 530038
Q gi|254780670|r 337 NQIGSV 342 (424)
Q Consensus 337 NQiGTv 342 (424)
-++|-.
T Consensus 239 ~~~G~~ 244 (313)
T 2h3h_A 239 YMMGYL 244 (313)
T ss_dssp HHHHHH
T ss_pred HHHHHH
T ss_conf 999999
No 118
>2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A*
Probab=49.51 E-value=12 Score=16.31 Aligned_cols=74 Identities=23% Similarity=0.254 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHH----HHHHHHC-C-EEEEECCCC
Q ss_conf 899999999997538531110234311046532027851111468656878999999----9876544-8-699776763
Q gi|254780670|r 214 DSALDLIANSIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYL----ANLVDQY-P-IYSIEDGMS 287 (424)
Q Consensus 214 eeaL~ll~eAi~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y----~~l~~~y-P-I~sIEDP~~ 287 (424)
.+.+.-+.+||++.|++.|-=.+.++|.- ..+...+|.-..........++.+|+ .+|+++| | ++....+..
T Consensus 151 rDiv~el~~A~rk~Glk~G~Y~S~~~dW~--~~~~~~~~~~~~~~~~~~~~~y~~~~~~Ql~EL~~~Y~pd~lWfD~~~~ 228 (455)
T 2zxd_A 151 RDLVGDLAKAVREAGLRFGVYYSGGLDWR--FTTEPIRYPEDLSYIRPNTYEYADYAYKQVMELVDLYLPDVLWNDMGWP 228 (455)
T ss_dssp SCHHHHHHHHHHHTTCEEEEEEECSCCGG--GCCSCCCSGGGGGTCSCCSHHHHHHHHHHHHHHHHHHCCSEEEEESCCC
T ss_pred CCHHHHHHHHHHHCCCEEEEEECCCCCCC--CCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf 73799999999866984899963653456--6666667842331256540889999999999999734884798657655
Q ss_pred CC
Q ss_conf 10
Q gi|254780670|r 288 ED 289 (424)
Q Consensus 288 e~ 289 (424)
..
T Consensus 229 ~~ 230 (455)
T 2zxd_A 229 EK 230 (455)
T ss_dssp GG
T ss_pred CC
T ss_conf 66
No 119
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; NP_940074.1, structural genomics, joint center for structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=48.99 E-value=12 Score=16.25 Aligned_cols=28 Identities=14% Similarity=0.353 Sum_probs=16.6
Q ss_pred CCCCCHHHHHHHHHHHHHHCCEEEEECCC
Q ss_conf 86568789999999876544869977676
Q gi|254780670|r 258 NLELQPNEMASYLANLVDQYPIYSIEDGM 286 (424)
Q Consensus 258 ~~~~t~~elid~y~~l~~~yPI~sIEDP~ 286 (424)
|..++.+++-++ .+|+.+|.+.-|+|-.
T Consensus 164 G~~~s~e~~~~l-~~~~~~~~~~ii~De~ 191 (377)
T 3fdb_A 164 GMVFAPEWLNEL-CDLAHRYDARVLVDEI 191 (377)
T ss_dssp TBCCCHHHHHHH-HHHHHHTTCEEEEECT
T ss_pred CCCCCHHHHHHH-HHHHHHCCEEEEEECC
T ss_conf 730348888888-8777637869998544
No 120
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=48.98 E-value=12 Score=16.25 Aligned_cols=79 Identities=15% Similarity=0.047 Sum_probs=34.5
Q ss_pred CCCHHHHHHHHHHHHHHCC-EE--EEECCCCCCCHHHH--HHHHHHCC---CCEEEECCCEEECCHHHHHHHHHCCCCCE
Q ss_conf 5687899999998765448-69--97767631042379--98864238---83685043000021488852100386522
Q gi|254780670|r 260 ELQPNEMASYLANLVDQYP-IY--SIEDGMSEDDWHGW--KILTNKIG---SNCQLVGDDLFVTNPERLHKGINEEVANA 331 (424)
Q Consensus 260 ~~t~~elid~y~~l~~~yP-I~--sIEDP~~e~D~~gw--~~l~~~~g---~~~~IvGDDL~vTn~~rl~~gi~~~~~Na 331 (424)
..++++-...+..++.++| +- .| |.-+|.-.. ....+..| .+..+||-|-.......+ .+-......+
T Consensus 176 ~~~~~~~~~~~~~~l~~~~~~~~~~i---~~~~d~~a~g~~~al~~~G~~~~~~~~vg~d~~~~~~~~~-~~~~~~~~at 251 (306)
T 8abp_A 176 SNDIPGAFDAANSMLVQHPEVKHWLI---VGMNDSTVLGGVRATEGQGFKAADIIGIGINGVDAVSELS-KAQATGFYGS 251 (306)
T ss_dssp SSSHHHHHHHHHHHHTTCTTCSEEEE---ECSSHHHHHHHHHHHHHTTCCGGGEEEEEESSGGGHHHHT-SSSCCSEEEE
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCC---CCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHH-CCCCCCEEEE
T ss_conf 51467999999998864888874443---4454399999999999859999987999978958999974-7577760699
Q ss_pred EEECCCCHHHH
Q ss_conf 34254530038
Q gi|254780670|r 332 ILIKPNQIGSV 342 (424)
Q Consensus 332 iliK~NQiGTv 342 (424)
+...|.+.|..
T Consensus 252 v~~~~~~~g~~ 262 (306)
T 8abp_A 252 LLPSPDVHGYK 262 (306)
T ss_dssp EECCHHHHHHH
T ss_pred EECCHHHHHHH
T ss_conf 95599999999
No 121
>2a3n_A Putative glucosamine-fructose-6-phosphate aminotransferase; 16423107, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.23A {Salmonella typhimurium LT2}
Probab=46.71 E-value=5 Score=19.04 Aligned_cols=31 Identities=13% Similarity=-0.046 Sum_probs=12.2
Q ss_pred CEEEECCCCHHHHHHHH-HHHHHHHHCCCEEEEE
Q ss_conf 22342545300389999-9999999879869995
Q gi|254780670|r 330 NAILIKPNQIGSVSETL-NTIEKAQMAGYPSIIS 362 (424)
Q Consensus 330 NailiK~NQiGTvset~-ea~~~a~~~g~~~ivS 362 (424)
.-++|.++.- ..+.. ...++.+..+-.++|-
T Consensus 270 ~vi~i~~~~~--~~~~~~~~~~~~~~~~~~~~vi 301 (355)
T 2a3n_A 270 PLILVKGEGK--CRALDERVERFASKITDNLVVI 301 (355)
T ss_dssp CEEEECCSST--THHHHHHHHHHHHHHCSCEEEE
T ss_pred EEEEEECCCC--HHHHHHHHHHHHHCCCCEEEEE
T ss_conf 5999967984--5899999999997589879999
No 122
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA SAP; 2.00A {Rhizobium etli cfn 42}
Probab=46.66 E-value=12 Score=16.18 Aligned_cols=34 Identities=21% Similarity=0.418 Sum_probs=16.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHH
Q ss_conf 680489999999875678975-98855789888646
Q gi|254780670|r 58 FGKGVLKAIAFVNDEIRTALL-GCDARDQLLIDKIM 92 (424)
Q Consensus 58 ~G~gV~~Av~~in~~i~~~L~-g~~~~dQ~~iD~~L 92 (424)
.|+.-..|++.....++.--+ |. .+|..-+-++|
T Consensus 419 ~~~~~~~a~~~~~~~l~~~~~~g~-~tn~~~l~~~~ 453 (1165)
T 2qf7_A 419 WAPNPLEAISRMDRALREFRIRGV-ATNLTFLEAII 453 (1165)
T ss_dssp EESSHHHHHHHHHHHHHHCEEESS-CCSHHHHHHHH
T ss_pred ECCCHHHHHHHHHHHHHHCEEECC-CCCHHHHHHHH
T ss_conf 759999999999999741599695-57889999896
No 123
>3i0z_A Putative tagatose-6-phosphate ketose/aldose isomerase; NP_344614.1, structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Streptococcus pneumoniae TIGR4}
Probab=46.42 E-value=11 Score=16.60 Aligned_cols=38 Identities=11% Similarity=0.065 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 578988864653036643221232222024489987526
Q gi|254780670|r 83 RDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAA 121 (424)
Q Consensus 83 ~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A 121 (424)
.++..|...+.++-...+..++ -=+-.+.|.-++.+++
T Consensus 38 ~~~~~i~~~~~~~~~~~~~~rI-~~vG~GtSy~aa~~~~ 75 (389)
T 3i0z_A 38 AKREEIAAFLQEIADKHDYIKV-ILTGAGTSAYVGDTLL 75 (389)
T ss_dssp HHHHHHHHHHHHHHHHCSSEEE-EEECSTHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCEE-EEEEECHHHHHHHHHH
T ss_conf 3146788887766542788679-9999608999999999
No 124
>1gud_A ALBP, D-allose-binding periplasmic protein; periplasmic binding protein, X-RAY crystallography, hinge bending, conformational change; 1.7A {Escherichia coli} SCOP: c.93.1.1 PDB: 1gub_A 1rpj_A*
Probab=45.63 E-value=13 Score=15.89 Aligned_cols=77 Identities=16% Similarity=0.174 Sum_probs=42.2
Q ss_pred CCCHHHHHHHHHHHHHHCC-EEEEECCCCCCCHHHHHHHHHH-CCCCEEEECCCEEECCHHHHHHHHHCCCCC-EEEECC
Q ss_conf 5687899999998765448-6997767631042379988642-388368504300002148885210038652-234254
Q gi|254780670|r 260 ELQPNEMASYLANLVDQYP-IYSIEDGMSEDDWHGWKILTNK-IGSNCQLVGDDLFVTNPERLHKGINEEVAN-AILIKP 336 (424)
Q Consensus 260 ~~t~~elid~y~~l~~~yP-I~sIEDP~~e~D~~gw~~l~~~-~g~~~~IvGDDL~vTn~~rl~~gi~~~~~N-ailiK~ 336 (424)
..+.+.-.+....|..++| +-.|--.-+.--...++.+.+. +..++.|+|=|........+..| ... .+...|
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~a~g~~~al~~~g~~~dv~i~g~d~~~~~~~~i~~g----~i~~ti~~~~ 249 (288)
T 1gud_A 174 DWDRIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAG----QMTATVAQNP 249 (288)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCCEEEESSHHHHHHHHHHHHHTTCTTTSEEEEESCCHHHHHHHHHT----SSCEEEECCH
T ss_pred CHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCC----CCEEEEECCH
T ss_conf 124689999999887419986057535988999999999976999984999989849999986549----9429993799
Q ss_pred CCHH
Q ss_conf 5300
Q gi|254780670|r 337 NQIG 340 (424)
Q Consensus 337 NQiG 340 (424)
-+.|
T Consensus 250 ~~~G 253 (288)
T 1gud_A 250 ADIG 253 (288)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 9999
No 125
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=44.68 E-value=14 Score=15.79 Aligned_cols=29 Identities=17% Similarity=0.242 Sum_probs=22.9
Q ss_pred CCCCEEEECCCCHHHHHHHHHHHHHHHHC
Q ss_conf 86522342545300389999999999987
Q gi|254780670|r 327 EVANAILIKPNQIGSVSETLNTIEKAQMA 355 (424)
Q Consensus 327 ~~~NailiK~NQiGTvset~ea~~~a~~~ 355 (424)
..++++++=|.=+||+.|..++....+-.
T Consensus 130 ~~sDafI~LPGG~GTLdEl~e~lt~~qlg 158 (217)
T 1wek_A 130 RYAVGFVFLPGGFGTLDELSEVLVLLQTE 158 (217)
T ss_dssp HTEEEEEECSCCHHHHHHHHHHHHHHHTT
T ss_pred HCCCEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 62976898488876189999999997625
No 126
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, structural genomics, center for structural genomics of infectious diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str}
Probab=44.16 E-value=14 Score=15.74 Aligned_cols=29 Identities=14% Similarity=0.335 Sum_probs=16.3
Q ss_pred CCCCCHHHHHHHHHHHHHHCCEEEEECCCC
Q ss_conf 865687899999998765448699776763
Q gi|254780670|r 258 NLELQPNEMASYLANLVDQYPIYSIEDGMS 287 (424)
Q Consensus 258 ~~~~t~~elid~y~~l~~~yPI~sIEDP~~ 287 (424)
|..++.+++.++ .+++.+|.+.-|+|=..
T Consensus 170 G~~~s~e~l~~l-~~~a~~~~~~ii~De~Y 198 (383)
T 3kax_A 170 GRVWKKEELTKL-GSLCTKYNVIVVADEIH 198 (383)
T ss_dssp TBCCCHHHHHHH-HHHHHHHTCEEEEECTT
T ss_pred CCCCCHHHHHHH-HHHHCCCEEEEECCCCC
T ss_conf 665769999999-76412536889603100
No 127
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A*
Probab=42.36 E-value=15 Score=15.55 Aligned_cols=26 Identities=23% Similarity=0.282 Sum_probs=19.6
Q ss_pred CCCCCCH----HHHHHHHHHHHHCCCCHHH
Q ss_conf 3222202----4489987526634984888
Q gi|254780670|r 105 GANAILG----VSLAVSKAAAQTSNLPLYK 130 (424)
Q Consensus 105 GaNailA----vSlA~akA~A~~~~~pLy~ 130 (424)
++..|+| ..+-++|+.|...++|+..
T Consensus 86 ~~D~IvavGGGs~~D~aK~~A~~~~~p~i~ 115 (370)
T 1jq5_A 86 EAAIVIGVGGGKTLDTAKAVADELDAYIVI 115 (370)
T ss_dssp TCSEEEEEESHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCEEEECCCCCCCCHHHHHHCCCCCCEEE
T ss_conf 887899737863020121221014663255
No 128
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes}
Probab=41.79 E-value=15 Score=15.49 Aligned_cols=267 Identities=11% Similarity=0.107 Sum_probs=105.3
Q ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCC
Q ss_conf 88557898886465303664322123222202448998752663498488822532456475430000036645567766
Q gi|254780670|r 80 CDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHILPVPLMNILNGGIHADNALD 159 (424)
Q Consensus 80 ~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~yl~~~~~~~lP~P~~NiinGG~HA~~~l~ 159 (424)
..+.|+.-..+.|..+-. .++..+....+-++=-++-.++=......--.||.....+. +-+-+.-++|=.-.++.+
T Consensus 67 ~~i~dp~RE~~vl~ri~~-~~~g~l~~~~i~~I~r~Ii~~s~~lq~~~~~~~l~~~r~~~-~~~t~i~i~~~~~G~~~~- 143 (385)
T 3nvt_A 67 SLRFDPLREREMLNTILA-ANEGPFEDSTVQKLFKEIFKAGLELQEEDHSKALLVSRKNK-KEDTIVTVKGLPIGNGEP- 143 (385)
T ss_dssp --CCCHHHHHHHHHHHHH-HCCSSSCHHHHHHHHHHHHHHHHTTSTTCCTTSCTTBTTTC-CSCCCEEETTEEETSSSC-
T ss_pred CCCCCHHHHHHHHHHHHH-HCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCEEEECCEEECCCCE-
T ss_conf 974082999999999998-57899899999999999999999997533545346677667-899889989999879987-
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHH
Q ss_conf 1025651488774899989999999999987520---0001367655764488684689999999999753853111023
Q gi|254780670|r 160 FQEFMIMPVGAENIREAIRMGAEVFHTLKKELKS---KGYSTNVGDEGGFSPNLKTADSALDLIANSIEKAGYNAGKDLL 236 (424)
Q Consensus 160 iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~---~g~~t~vgDEGGfap~~~~~eeaL~ll~eAi~~aGy~~g~di~ 236 (424)
=|++=|-...|.+.+++++ +.+++.-.+ ++..-...--.+|.=+ -.+.|+++.++.++.|+....||.
T Consensus 144 --~~IaGPCsiEs~e~~~~~A----~~lk~~~~~~~r~~~fk~RTs~~sf~G~---G~egL~il~~i~~~~Glpv~Tev~ 214 (385)
T 3nvt_A 144 --VFVFGPCSVESYEQVAAVA----ESIKAKGLKLIRGGAFKPRTSPYDFQGL---GLEGLKILKRVSDEYGLGVISEIV 214 (385)
T ss_dssp --EEEEECSBCCCHHHHHHHH----HHHHHTTCCEEECBSSCCCSSTTSCCCC---THHHHHHHHHHHHHHTCEEEEECC
T ss_pred --EEEEECCCCCCHHHHHHHH----HHHHHCCCCEEECCEECCCCCCCCCCCC---CHHHHHHHHHHHHHCCCCEEEEEH
T ss_conf --8998788238999999999----9998669718974414689998675786---589999999999864997466311
Q ss_pred HHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCC--CCCCHHHHHHHHHHCCCCEEEECCCEEE
Q ss_conf 43110465320278511114686568789999999876544869977676--3104237998864238836850430000
Q gi|254780670|r 237 IALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGM--SEDDWHGWKILTNKIGSNCQLVGDDLFV 314 (424)
Q Consensus 237 i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~--~e~D~~gw~~l~~~~g~~~~IvGDDL~v 314 (424)
-.-++.. -.+---.+.-..+.....+|+....+. .- .+-|--+. ..+||.+=.+.....|.+ +++
T Consensus 215 d~~~~~~---v~e~vDilqI~A~~~~n~~Ll~~~a~t--~k-pV~lKkG~~~s~~~~~~a~e~i~~~GN~-~i~------ 281 (385)
T 3nvt_A 215 TPADIEV---ALDYVDVIQIGARNMQNFELLKAAGRV--DK-PILLKRGLSATIEEFIGAAEYIMSQGNG-KII------ 281 (385)
T ss_dssp SGGGHHH---HTTTCSEEEECGGGTTCHHHHHHHHTS--SS-CEEEECCTTCCHHHHHHHHHHHHTTTCC-CEE------
T ss_pred HHHHHHH---HHHHCCEEEECCHHCCCHHHHHHHHCC--CC-CEEECCCCCCCHHHHHHHHHHHHHCCCC-CCE------
T ss_conf 0131799---986375466360002479999998705--98-3894588879999999999999955999-633------
Q ss_pred CCHHHHHHHHHCC-CCCEEEECCCCHHHHHHHHHHHHHH-HHCCCEEEEE--CCCCCCCHHHHHHH---HHHHCCC--HH
Q ss_conf 2148885210038-6522342545300389999999999-9879869995--07888723589989---9981998--01
Q gi|254780670|r 315 TNPERLHKGINEE-VANAILIKPNQIGSVSETLNTIEKA-QMAGYPSIIS--HRSGETEDHTIADL---AVATNCG--QI 385 (424)
Q Consensus 315 Tn~~rl~~gi~~~-~~NailiK~NQiGTvset~ea~~~a-~~~g~~~ivS--hRSGETeD~~iaDL---AVg~~a~--~i 385 (424)
..++|.... -.+...+..+ ++... +..++-+|+- |-.|.. .++..| ||++|+. +|
T Consensus 282 ----l~eRG~~~~~~~~~~~ld~~----------~i~~lk~~~~~PVi~D~SHs~G~~--~~v~~la~AAva~G~dGl~i 345 (385)
T 3nvt_A 282 ----LCERGIRTYEKATRNTLDIS----------AVPILKKETHLPVMVDVTHSTGRK--DLLLPCAKAALAIEADGVMA 345 (385)
T ss_dssp ----EEECCBCCSCCSSSSBCCTT----------HHHHHHHHBSSCEEEEHHHHHCCG--GGHHHHHHHHHHTTCSEEEE
T ss_pred ----EEECCCCCCCCCCCCCCCHH----------HHHHHHHCCCCCEEEECCCCCCCH--HHHHHHHHHHHHHCCCEEEE
T ss_conf ----87577678999876675466----------699997378999899698768883--15999999999958998999
Q ss_pred EE
Q ss_conf 00
Q gi|254780670|r 386 KT 387 (424)
Q Consensus 386 K~ 387 (424)
-+
T Consensus 346 E~ 347 (385)
T 3nvt_A 346 EV 347 (385)
T ss_dssp EB
T ss_pred EC
T ss_conf 80
No 129
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=41.61 E-value=15 Score=15.47 Aligned_cols=88 Identities=17% Similarity=0.286 Sum_probs=47.3
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEE----EC-CCCCCCH-------HHHHHHHHHHCCCH----HEECCCCHHHHHHH-
Q ss_conf 45300389999999999987986999----50-7888723-------58998999819980----10075611448999-
Q gi|254780670|r 336 PNQIGSVSETLNTIEKAQMAGYPSII----SH-RSGETED-------HTIADLAVATNCGQ----IKTGSLARSDRIAK- 398 (424)
Q Consensus 336 ~NQiGTvset~ea~~~a~~~g~~~iv----Sh-RSGETeD-------~~iaDLAVg~~a~~----iK~G~~~R~ER~aK- 398 (424)
|++.-|+..+-+++..+.+.|+-+|+ +. +.|..++ ...+.+|.++|+.. +|++.+.+-||+..
T Consensus 156 p~~~~~le~~a~~v~e~~~~glp~mvEp~~~~~~~g~~~~d~~~e~v~~a~riAaeLGadivkt~lk~p~~~~~~~V~~a 235 (307)
T 3fok_A 156 AGTAPTLEATAHAVNEAAAAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSVAIAAGLGNDSSYTWMKLPVVEEMERVMES 235 (307)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEETTEEEECCSHHHHHHHHHHHHTCSSCCSSEEEEEECCTTHHHHGGG
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 43699999999999999975996699876512588865677888999999999998576701035778985369999971
Q ss_pred ---------------HH-HHHHHHHHH---HHCCCCCCHHHHCC
Q ss_conf ---------------99-999999983---11045576253047
Q gi|254780670|r 399 ---------------YN-QLIRIEESL---GKQAKFAGRSILIH 423 (424)
Q Consensus 399 ---------------yN-rLlrIee~L---g~~a~~~g~~~~~~ 423 (424)
.- -|.++++.| |..+.-.|+|.|++
T Consensus 236 ~~~Pvli~GG~~~~d~e~~l~~~~~Al~~~Ga~G~~~GRnv~~~ 279 (307)
T 3fok_A 236 TTMPTLLLGGEGGNDPDATFASWEHALTLPGVRGLTVGRTLLYP 279 (307)
T ss_dssp CSSCEEEECCSCC--CHHHHHHHHHHTTSTTEEEEEECTTTSSC
T ss_pred CCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCC
T ss_conf 69878996699889999999999999970798089887123668
No 130
>2aml_A SIS domain protein; 46906266, LMO0035 protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes str}
Probab=41.56 E-value=15 Score=15.46 Aligned_cols=11 Identities=36% Similarity=0.525 Sum_probs=5.9
Q ss_pred HHHHHHHHHHH
Q ss_conf 24489987526
Q gi|254780670|r 111 GVSLAVSKAAA 121 (424)
Q Consensus 111 AvSlA~akA~A 121 (424)
+.|+.++.+++
T Consensus 59 GsS~~aa~~a~ 69 (373)
T 2aml_A 59 GSSLNAAQSAK 69 (373)
T ss_dssp HHHHHHHHHHH
T ss_pred CHHHHHHHHHH
T ss_conf 37999999999
No 131
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=40.78 E-value=16 Score=15.38 Aligned_cols=94 Identities=7% Similarity=0.021 Sum_probs=55.4
Q ss_pred CCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCC------------------CCCCHHHHHHHHHHCCCCEEEECC
Q ss_conf 78511114686568789999999876544869977676------------------310423799886423883685043
Q gi|254780670|r 249 KEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGM------------------SEDDWHGWKILTNKIGSNCQLVGD 310 (424)
Q Consensus 249 ~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~------------------~e~D~~gw~~l~~~~g~~~~IvGD 310 (424)
.++..++. ...++++..+... ++.+..+.+++=|. ++++|+....+.+.++.++..+|+
T Consensus 107 ~g~iiid~--sT~~p~~~~~~~~-~~~~~g~~~ldaPVsGg~~~A~~G~l~~~vgG~~~~~~~~~~il~~~~~~i~~~G~ 183 (310)
T 3doj_A 107 EGKGYIDM--STVDAETSLKINE-AITGKGGRFVEGPVSGSKKPAEDGQLIILAAGDKALFEESIPAFDVLGKRSFYLGQ 183 (310)
T ss_dssp TTCEEEEC--SCCCHHHHHHHHH-HHHHTTCEEEECCEECCHHHHHHTCEEEEEEECHHHHHHHHHHHHHHEEEEEECSS
T ss_pred CCCEEEEC--CCCCHHHHHHHHH-HHHHCCCEEEEEECCCCHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCCEEEECC
T ss_conf 89889956--8763777899999-99844976996337788688856982200479879999870587851697799799
Q ss_pred CEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCE
Q ss_conf 000021488852100386522342545300389999999999987986
Q gi|254780670|r 311 DLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYP 358 (424)
Q Consensus 311 DL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~ 358 (424)
- ..|-..|.+|..++ .+.+.-+.|+..++++.|..
T Consensus 184 ~---------G~g~~~Kl~~N~l~----~~~~~a~aEa~~la~~~Gld 218 (310)
T 3doj_A 184 V---------GNGAKMKLIVNMIM----GSMMNAFSEGLVLADKSGLS 218 (310)
T ss_dssp T---------THHHHHHHHHHHHH----HHHHHHHHHHHHHHHHTTSC
T ss_pred C---------CHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCCCC
T ss_conf 7---------48889999999999----99999999999998634999
No 132
>1mp9_A Tata-binding protein; transcription regulation, DNA-binding protein, transcription factor, DNA binding protein; 2.00A {Sulfolobus acidocaldarius} SCOP: d.129.1.1 d.129.1.1
Probab=40.16 E-value=16 Score=15.31 Aligned_cols=128 Identities=18% Similarity=0.196 Sum_probs=67.4
Q ss_pred CCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCC----C-CCCCCCCCCCCCCCCHH
Q ss_conf 754300000366455677661025651488774899989999999999987520000----1-36765576448868468
Q gi|254780670|r 140 LPVPLMNILNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGY----S-TNVGDEGGFSPNLKTAD 214 (424)
Q Consensus 140 lP~P~~NiinGG~HA~~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~----~-t~vgDEGGfap~~~~~e 214 (424)
-|..-+.|.+.|+ ++-.|++|..++-+..-.+.+.|++...+... . .++- +-|..++.-+
T Consensus 56 ~p~~tvliF~sGk------------ivitG~ks~~~a~~a~~~~~~~L~~~~~~~~~~~~~~i~nIv--as~~~~~~i~- 120 (198)
T 1mp9_A 56 SPKITSLIFKSGK------------MVVTGAKSTDELIKAVKRIIKTLKKYGMQLTGKPKIQIQNIV--ASANLHVIVN- 120 (198)
T ss_dssp TTTEEEEECTTSE------------EEEECCSSHHHHHHHHHHHHHHHHHTTCCCSSCCEEEEEEEE--EEEECSSEEC-
T ss_pred CCCEEEEEECCCE------------EEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE--EEECCCCCCC-
T ss_conf 9956999966980------------998367999999999999999999739865467751599999--7710598524-
Q ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHCHH------HHHHCCCCCEEECCCCCCCCHHHHH---HHHHHHHHHCCEEEEECC
Q ss_conf 9999999999753853111023431104------6532027851111468656878999---999987654486997767
Q gi|254780670|r 215 SALDLIANSIEKAGYNAGKDLLIALDCA------ASAFFKKEKYILKGENLELQPNEMA---SYLANLVDQYPIYSIEDG 285 (424)
Q Consensus 215 eaL~ll~eAi~~aGy~~g~di~i~lD~A------Asefy~~~kY~~~~~~~~~t~~eli---d~y~~l~~~yPI~sIEDP 285 (424)
|+.+......+-|+| +.+-||-+- .--.|..||-...+. ++.+|+- ++....+.+|.-.. |
T Consensus 121 --L~~l~~~~~~~~YeP--e~fPGliyr~~~~k~t~liF~SGkivitGa---ks~~~~~~a~~~i~~~L~~~~~~~---~ 190 (198)
T 1mp9_A 121 --LDKAAFLLENNMYEP--EQFPGLIYRMDEPRVVLLIFSSGKMVITGA---KREDEVHKAVKKIFDKLVELDCVK---P 190 (198)
T ss_dssp --HHHHHHHSSSEECCT--TTCSSEEEEETTTTEEEEECTTSEEEEEEE---SSHHHHHHHHHHHHHHHHHTTCEE---C
T ss_pred --HHHHHHHCCCCCCCC--CCCCEEEEEECCCCEEEEEECCCEEEEECC---CCHHHHHHHHHHHHHHHHHHHCCC---C
T ss_conf --789886303762787--658547999589968999978975999778---999999999999999999851557---5
Q ss_pred CCCCCHH
Q ss_conf 6310423
Q gi|254780670|r 286 MSEDDWH 292 (424)
Q Consensus 286 ~~e~D~~ 292 (424)
..|+|.+
T Consensus 191 ~eee~~~ 197 (198)
T 1mp9_A 191 VEEEELE 197 (198)
T ss_dssp TTSCCCC
T ss_pred CCHHCCC
T ss_conf 5120147
No 133
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha JMP134}
Probab=39.89 E-value=16 Score=15.28 Aligned_cols=26 Identities=23% Similarity=0.440 Sum_probs=18.3
Q ss_pred CCCCCCH----HHHHHHHHHHHHCCCCHHH
Q ss_conf 3222202----4489987526634984888
Q gi|254780670|r 105 GANAILG----VSLAVSKAAAQTSNLPLYK 130 (424)
Q Consensus 105 GaNailA----vSlA~akA~A~~~~~pLy~ 130 (424)
++..++| -++-++|+.|...++|+.-
T Consensus 89 ~~D~IiavGGGs~iD~aK~ia~~~~~P~i~ 118 (358)
T 3jzd_A 89 GADCAVAVGGGSTTGLGKAIALETGMPIVA 118 (358)
T ss_dssp TCSEEEEEESHHHHHHHHHHHHHHCCCEEE
T ss_pred CCCEEEEECCCCCCCCCCCEEEECCCCEEC
T ss_conf 999899968845456541125404586412
No 134
>1j5x_A Glucosamine-6-phosphate deaminase; structural genomics, TM0813, JCSG, PSI, protein structure initiative; 1.80A {Thermotoga maritima} SCOP: c.80.1.1
Probab=38.28 E-value=17 Score=15.11 Aligned_cols=22 Identities=9% Similarity=0.095 Sum_probs=9.9
Q ss_pred HHHHHHHHHCCCEEEEECCCCC
Q ss_conf 9999999987986999507888
Q gi|254780670|r 346 LNTIEKAQMAGYPSIISHRSGE 367 (424)
Q Consensus 346 ~ea~~~a~~~g~~~ivShRSGE 367 (424)
....+..+..|-.++.=...++
T Consensus 277 ~~~~~~l~~~g~~vi~i~~~~~ 298 (342)
T 1j5x_A 277 KRLRKELESLGATVLEVGEGGD 298 (342)
T ss_dssp HHHHHHHHHTTCEEEEESTTSS
T ss_pred HHHHHHHHHCCCEEEEECCCCC
T ss_conf 9999999982997999888987
No 135
>3gza_A Putative alpha-L-fucosidase; NP_812709.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE EPE; 1.60A {Bacteroides thetaiotaomicron vpi-5482}
Probab=37.21 E-value=13 Score=16.07 Aligned_cols=192 Identities=16% Similarity=0.172 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCC----CHHHHHHHH----HHHHHHCC-EEE-EE
Q ss_conf 899999999997538531110234311046532027851111468656----878999999----98765448-699-77
Q gi|254780670|r 214 DSALDLIANSIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLEL----QPNEMASYL----ANLVDQYP-IYS-IE 283 (424)
Q Consensus 214 eeaL~ll~eAi~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~----t~~elid~y----~~l~~~yP-I~s-IE 283 (424)
.+.+.-+.+||.+.|++.| ++++++.- +....+.....+... ..+...+|+ .+|+.+|+ |.- -=
T Consensus 108 rDiv~el~~A~rk~Glk~G--~Y~S~~w~----~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~Ql~EL~t~Yg~i~~lW~ 181 (443)
T 3gza_A 108 GDIVRDFVNSCRKYGLQPG--IYIGIRWN----SLLGIHNFKAEGEGAFARNRQAWYKRLCEKMVTELCTRYGDLYMIWF 181 (443)
T ss_dssp CCHHHHHHHHHHHHTCEEE--EEECCSCB----TTTTEETTEESCCHHHHHHHHHHHHHHHHHHHHHHHHSSCCCSEEEE
T ss_pred CCHHHHHHHHHHHHCCCEE--EEEEECCC----CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 6879999999987098469--99840336----75445787645666565235799999988775566503787418984
Q ss_pred CCC---CCCCHHHHHHHHHHCCCCEEEECCCEEECCHHH--HHHHHHCCCCCEEEECCCCHHH-H---HHHHHHHHHHHH
Q ss_conf 676---310423799886423883685043000021488--8521003865223425453003-8---999999999998
Q gi|254780670|r 284 DGM---SEDDWHGWKILTNKIGSNCQLVGDDLFVTNPER--LHKGINEEVANAILIKPNQIGS-V---SETLNTIEKAQM 354 (424)
Q Consensus 284 DP~---~e~D~~gw~~l~~~~g~~~~IvGDDL~vTn~~r--l~~gi~~~~~NailiK~NQiGT-v---set~ea~~~a~~ 354 (424)
|.= ...||..|..+-.++-..|.|..+ ......+. .+.|.....+-+.+-.+.+-.. . ....+..+.-..
T Consensus 182 DG~~~~~~~~~~~~~~~i~~~qP~~vi~~~-~~~~~~rw~gne~g~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 260 (443)
T 3gza_A 182 DGGADDPRADGPDVEPIVNKYQPNCLFYHN-IDRADFRWGGSETGTVEYPCWSTFPVPCSHHKRIESSIDQLELLKHGDK 260 (443)
T ss_dssp TTCCCCTTTTSCCCHHHHHHHCTTSEEECC-SSCBSSEECSSSSSCCCSSCCSEESSSSCCTTTSCTTSCHHHHHHHCCT
T ss_pred CCCCCCCCCHHHHHHHHHHHHCCCEEEECC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 489754432056799999975895489667-5545655455545422576455457665456665667765232566666
Q ss_pred CC-----CEEEEECCCCC---------CCHH---HHHHH------HHHHCCCHHEECCCCHHHHH--HHHHHHHHHHHHH
Q ss_conf 79-----86999507888---------7235---89989------99819980100756114489--9999999999983
Q gi|254780670|r 355 AG-----YPSIISHRSGE---------TEDH---TIADL------AVATNCGQIKTGSLARSDRI--AKYNQLIRIEESL 409 (424)
Q Consensus 355 ~g-----~~~ivShRSGE---------TeD~---~iaDL------AVg~~a~~iK~G~~~R~ER~--aKyNrLlrIee~L 409 (424)
.| +.+-+|-|.|- ++|. +..+| .|+-|+.++---+|.+-=++ .-.++|..|-+.|
T Consensus 261 ~g~~W~p~e~d~si~~g~~~~~W~y~~~e~~~~kS~~eLi~~l~~sVsknGNLLLNVgP~~dG~Ipe~d~~~L~eiG~wL 340 (443)
T 3gza_A 261 NGRYWVPAMADTPLRGANGRHEWFWEPDDENNIYPLNTLMDKYEKSVGRNATLILGLTPDPTGLIPAGDAQRLKEMGDEI 340 (443)
T ss_dssp TCSEECCEEEEEESBCCTTCCBSSCCTTCGGGSCCHHHHHHHHHTTTTBTCEEEEEECCCTTSSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCEEECCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 88624255543232577788870001088888289999999999996779769981286889984999999999999999
Q ss_pred HHC
Q ss_conf 110
Q gi|254780670|r 410 GKQ 412 (424)
Q Consensus 410 g~~ 412 (424)
...
T Consensus 341 k~~ 343 (443)
T 3gza_A 341 NRR 343 (443)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 987
No 136
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=37.19 E-value=14 Score=15.80 Aligned_cols=16 Identities=31% Similarity=0.497 Sum_probs=6.8
Q ss_pred EEEECCCCCCHHHHHH
Q ss_conf 5651488774899989
Q gi|254780670|r 163 FMIMPVGAENIREAIR 178 (424)
Q Consensus 163 fmIiP~g~~sf~eal~ 178 (424)
|.++|=|..|+.|.++
T Consensus 101 fI~lPGG~GTLdEl~e 116 (191)
T 1t35_A 101 FISMPGGFGTYEELFE 116 (191)
T ss_dssp EEECSCCHHHHHHHHH
T ss_pred EEEECCCCCHHHHHHH
T ss_conf 8995786113999999
No 137
>3c3j_A Putative tagatose-6-phosphate ketose/aldose isomerase; structural genomics, PSI, MCSG, protein structure initiative; 1.80A {Escherichia coli K12}
Probab=36.87 E-value=18 Score=14.96 Aligned_cols=16 Identities=6% Similarity=-0.018 Sum_probs=7.5
Q ss_pred HHHHHHHHHHHCCCCC
Q ss_conf 7898886465303664
Q gi|254780670|r 84 DQLLIDKIMIDLDGTP 99 (424)
Q Consensus 84 dQ~~iD~~Li~lDgT~ 99 (424)
.+..++.++-.+...+
T Consensus 37 ~~~~i~~~~~~~~~~~ 52 (384)
T 3c3j_A 37 LRSALNNFLEPLLRKE 52 (384)
T ss_dssp HHHHHHHHHHHHHTCT
T ss_pred HHHHHHHHHHHHHHCC
T ss_conf 3668999987875278
No 138
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=36.02 E-value=18 Score=14.86 Aligned_cols=14 Identities=7% Similarity=-0.073 Sum_probs=5.9
Q ss_pred HCCEEEEECCCCCC
Q ss_conf 44869977676310
Q gi|254780670|r 276 QYPIYSIEDGMSED 289 (424)
Q Consensus 276 ~yPI~sIEDP~~e~ 289 (424)
--|+++--|.+...
T Consensus 318 G~P~iyyGde~~~~ 331 (405)
T 1ht6_A 318 GIPCIFYDHFFNWG 331 (405)
T ss_dssp SEEEEEHHHHHTSS
T ss_pred CCCEEEECCCCCCC
T ss_conf 94079878634872
No 139
>3gh1_A Predicted nucleotide-binding protein; structural genomics, protein structure initiative; 1.90A {Vibrio cholerae o1 biovar el tor str} PDB: 2pmb_A
Probab=35.66 E-value=19 Score=14.82 Aligned_cols=27 Identities=26% Similarity=0.358 Sum_probs=18.8
Q ss_pred CCCCEEEECCCCHHHHHHHHHHHHHHH
Q ss_conf 865223425453003899999999999
Q gi|254780670|r 327 EVANAILIKPNQIGSVSETLNTIEKAQ 353 (424)
Q Consensus 327 ~~~NailiK~NQiGTvset~ea~~~a~ 353 (424)
+.+.|+++=|.-+||+.|.+|+..+.+
T Consensus 246 ~~SdAfIvlPGG~GTLDELfE~LTLiQ 272 (462)
T 3gh1_A 246 RMAHGIIIFPGGPGTAEELLYILGIMM 272 (462)
T ss_dssp HHCSEEEECSCSHHHHHHHHHHHHHHT
T ss_pred HHCCEEEECCCCCCCHHHHHHHHHHHH
T ss_conf 867889986898862999999999987
No 140
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=34.91 E-value=19 Score=14.74 Aligned_cols=20 Identities=25% Similarity=0.481 Sum_probs=11.5
Q ss_pred EEEEECCCCCCHHHHHHHHH
Q ss_conf 25651488774899989999
Q gi|254780670|r 162 EFMIMPVGAENIREAIRMGA 181 (424)
Q Consensus 162 EfmIiP~g~~sf~eal~~~~ 181 (424)
=|.++|=|..|..|-+++.+
T Consensus 108 afIvlPGG~GTLdEl~evlt 127 (216)
T 1ydh_A 108 AFIALPGGYGTMEELLEMIT 127 (216)
T ss_dssp EEEECSCSHHHHHHHHHHHH
T ss_pred EEEECCCCCHHHHHHHHHHH
T ss_conf 89984887235999999999
No 141
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A*
Probab=34.34 E-value=20 Score=14.68 Aligned_cols=50 Identities=12% Similarity=0.169 Sum_probs=23.3
Q ss_pred CCCHHHHHHHHHHHHHHCCEEEEECCC------------------CCCCHHHHHHHHHHCCCCEEEECC
Q ss_conf 568789999999876544869977676------------------310423799886423883685043
Q gi|254780670|r 260 ELQPNEMASYLANLVDQYPIYSIEDGM------------------SEDDWHGWKILTNKIGSNCQLVGD 310 (424)
Q Consensus 260 ~~t~~elid~y~~l~~~yPI~sIEDP~------------------~e~D~~gw~~l~~~~g~~~~IvGD 310 (424)
..++++-.+.... +.+..+.+++-|. +++.|+-|..+-+.++.++..+|+
T Consensus 98 T~~p~~~~~~~~~-~~~~g~~~vdapvsGg~~~a~~g~l~~~~gG~~~~~~~~~~vL~~~~~~v~~~G~ 165 (302)
T 2h78_A 98 TIAPTSARKIHAA-ARERGLAMLDAPVSGGTAGAAAGTLTFMVGGDAEALEKARPLFEAMGRNIFHAGP 165 (302)
T ss_dssp CCCHHHHHHHHHH-HHHTTCCEEECCEESCHHHHHHTCEEEEEESCHHHHHHHHHHHHHHEEEEEEEES
T ss_pred CCCHHHHHHHHHH-HHHCCCCEEECCCCCCHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCEEEEECC
T ss_conf 8998999999999-9976992892588799778752987999837899999999999984791899689
No 142
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=33.63 E-value=20 Score=14.60 Aligned_cols=45 Identities=24% Similarity=0.327 Sum_probs=23.2
Q ss_pred CCCCCCCHH----HHHHHHHHHHHCCCC----HHHHCCCCCCCCCCCCCEEEC
Q ss_conf 232222024----489987526634984----888225324564754300000
Q gi|254780670|r 104 LGANAILGV----SLAVSKAAAQTSNLP----LYKYLGGCSAHILPVPLMNIL 148 (424)
Q Consensus 104 lGaNailAv----SlA~akA~A~~~~~p----Ly~yl~~~~~~~lP~P~~Nii 148 (424)
.++..|+|+ +|-.||+.|...+.| .|.|.+......-++|++.|-
T Consensus 87 ~~~D~IiavGGGs~iD~aK~va~~~~~~~~~~~~~~~~~~~~~~~~lP~i~VP 139 (386)
T 1rrm_A 87 SGADYLIAIGGGSPQDTCKAIGIISNNPEFADVRSLEGLSPTNKPSVPILAIP 139 (386)
T ss_dssp HTCSEEEEEESHHHHHHHHHHHHHHHCGGGTTSGGGSEECCCCSCCSCEEEEE
T ss_pred CCCCEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCEEEEC
T ss_conf 58887997688641048999999853864320344303565557877579604
No 143
>3hl0_A Maleylacetate reductase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str}
Probab=32.93 E-value=21 Score=14.52 Aligned_cols=25 Identities=20% Similarity=0.369 Sum_probs=16.7
Q ss_pred CCCCCCHH----HHHHHHHHHHHCCCCHH
Q ss_conf 32222024----48998752663498488
Q gi|254780670|r 105 GANAILGV----SLAVSKAAAQTSNLPLY 129 (424)
Q Consensus 105 GaNailAv----SlA~akA~A~~~~~pLy 129 (424)
++..++|+ ++=++|+.|...+.|..
T Consensus 87 ~~D~IiavGGGs~iD~aK~ia~~~~~~~i 115 (353)
T 3hl0_A 87 GADCVVSLGGGSTTGLGKAIALRTDAAQI 115 (353)
T ss_dssp TCSEEEEEESHHHHHHHHHHHHHHCCEEE
T ss_pred CCCEEEEECCCCCCCHHHHHHHCCCCCEE
T ss_conf 99889995886300133454413678657
No 144
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural genomics, PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=31.65 E-value=22 Score=14.37 Aligned_cols=36 Identities=8% Similarity=0.175 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHCCEEEEECCC--CCCCHHHHHHHHHHCC
Q ss_conf 89999999876544869977676--3104237998864238
Q gi|254780670|r 264 NEMASYLANLVDQYPIYSIEDGM--SEDDWHGWKILTNKIG 302 (424)
Q Consensus 264 ~elid~y~~l~~~yPI~sIEDP~--~e~D~~gw~~l~~~~g 302 (424)
.++.+.+.+.+++...-.++.+. .=+|+ ..|.+..+
T Consensus 322 ~~l~~~~~~a~~~lg~~~v~~~~~~gseDf---~~~~~~iP 359 (404)
T 1ysj_A 322 GTFLNAASEAAARLGYQTVHAEQSPGGEDF---ALYQEKIP 359 (404)
T ss_dssp GGGHHHHHHHHHHTTCEEEECCCBSSCCTH---HHHHTTSC
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCHH---HHHHHHHC
T ss_conf 999999999999839665258999881269---99987638
No 145
>3g8r_A Probable spore coat polysaccharide biosynthesis protein E; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=31.63 E-value=22 Score=14.37 Aligned_cols=190 Identities=14% Similarity=0.125 Sum_probs=98.2
Q ss_pred CHHHHHHHHHHHHHH-CCCCCCCCHHHHHCHHHHHHCCCC-------CEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEE
Q ss_conf 468999999999975-385311102343110465320278-------511114686568789999999876544869977
Q gi|254780670|r 212 TADSALDLIANSIEK-AGYNAGKDLLIALDCAASAFFKKE-------KYILKGENLELQPNEMASYLANLVDQYPIYSIE 283 (424)
Q Consensus 212 ~~eeaL~ll~eAi~~-aGy~~g~di~i~lD~AAsefy~~~-------kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIE 283 (424)
+.+.|.+++..|.+. +|+.--.-|.+-.- -+.++|.+. +|.-.++...++.+++.++ .+.|++..|..+-
T Consensus 19 d~~~ak~lI~~a~~~ga~~d~~~avKfQ~~-~~d~~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~l-~~~~k~~gi~f~~ 96 (350)
T 3g8r_A 19 NVEHGVALIRAIRESCQGFDFDFGFKLQYR-NLDTFIHSSFKGRDDVKYVKRFEETRLQPEQMQKL-VAEMKANGFKAIC 96 (350)
T ss_dssp CSHHHHHHHHHHHHHTTTCCSEEEEEEEEC-CHHHHBCGGGTTCCSSSSHHHHHHTCCCHHHHHHH-HHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCEEEEEEE-CHHHHCCHHCCCCCCHHHHHHHHHHHCCHHHHHHH-HHHHHHHCCCEEE
T ss_conf 599999999999986799765573688711-58993460103777425999999753999999999-9998621744252
Q ss_pred CCCCCCCHHHHHHHHHHCCC-CEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 67631042379988642388-36850430000214888521003865223425453003899999999999879869995
Q gi|254780670|r 284 DGMSEDDWHGWKILTNKIGS-NCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIIS 362 (424)
Q Consensus 284 DP~~e~D~~gw~~l~~~~g~-~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivS 362 (424)
.||+++..+-.. +++- -.-|...|+ ||...|++-... -.-++|... ..|+.|..++++..+..+...++=
T Consensus 97 s~fd~~s~~~l~----~~~~~~~KIaS~d~--~n~~Li~~i~~~--~kpiiiStG-~~~~~eI~~a~~~~~~~~~~~~ll 167 (350)
T 3g8r_A 97 TPFDEESVDLIE----AHGIEIIKIASCSF--TDWPLLERIARS--DKPVVASTA-GARREDIDKVVSFMLHRGKDLTIM 167 (350)
T ss_dssp EECSHHHHHHHH----HTTCCEEEECSSST--TCHHHHHHHHTS--CSCEEEECT-TCCHHHHHHHHHHHHTTTCCEEEE
T ss_pred CCCHHHHHHHHH----CCCCCEEEECCCHH--HHHHHHHHHHHH--CCCCEEECC-CCCHHHHHHHHHHHHCCCCEEEEE
T ss_conf 625477765654----04863797244153--104799998500--587612347-778888666666553258769996
Q ss_pred CC-CC-----------------------------CCCH--HHHHHHHHHHCCCHHEE--------CCCC-----HHHHHH
Q ss_conf 07-88-----------------------------8723--58998999819980100--------7561-----144899
Q gi|254780670|r 363 HR-SG-----------------------------ETED--HTIADLAVATNCGQIKT--------GSLA-----RSDRIA 397 (424)
Q Consensus 363 hR-SG-----------------------------ETeD--~~iaDLAVg~~a~~iK~--------G~~~-----R~ER~a 397 (424)
|. |. -|.. ...+=+||++||..|-- -+|. --|-..
T Consensus 168 hc~s~YPt~~ed~nL~~I~~Lk~~~~~~~vGySDHt~g~~~~~~~~Av~~GA~iIEKHfTldk~~~g~d~~S~~~~e~~~ 247 (350)
T 3g8r_A 168 HCVAEYPTPDDHLHLARIKTLRQQYAGVRIGYSTHEDPDLMEPIMLAVAQGATVFEKHVGLPTDQYGINNYSANPEQVRR 247 (350)
T ss_dssp ECCCCSSCCGGGCCTTHHHHHHHHCTTSEEEEEECCCSSCCHHHHHHHHTTCCEEEEEBCCCBTTBCCCTTCBCHHHHHH
T ss_pred ECCCCCCCCHHHCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCHHHCCCHHHHH
T ss_conf 14777899837747123544787536785787888777542126878858974120678447667897232027278999
Q ss_pred HHHHHHHHHHHHHHC
Q ss_conf 999999999983110
Q gi|254780670|r 398 KYNQLIRIEESLGKQ 412 (424)
Q Consensus 398 KyNrLlrIee~Lg~~ 412 (424)
-.+.+-++++.||+.
T Consensus 248 ~v~~i~~~~~~lg~~ 262 (350)
T 3g8r_A 248 WLAAAARALAMLGDG 262 (350)
T ss_dssp HHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHCCC
T ss_conf 999999999995799
No 146
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=31.26 E-value=22 Score=14.33 Aligned_cols=70 Identities=14% Similarity=0.097 Sum_probs=42.4
Q ss_pred CCCHHHHHHHHHHHHHHHHCC--CEEEEECCCCCCCHHHHHHHHHHHCCCHHEECC-----CCHHHHHHHHHHHHHHHHH
Q ss_conf 453003899999999999879--869995078887235899899981998010075-----6114489999999999998
Q gi|254780670|r 336 PNQIGSVSETLNTIEKAQMAG--YPSIISHRSGETEDHTIADLAVATNCGQIKTGS-----LARSDRIAKYNQLIRIEES 408 (424)
Q Consensus 336 ~NQiGTvset~ea~~~a~~~g--~~~ivShRSGETeD~~iaDLAVg~~a~~iK~G~-----~~R~ER~aKyNrLlrIee~ 408 (424)
.....+.-|.+..+.++|-.- ....++. +-|+...-...++.-.||.-|-+|. ++++ ..+.++.=++
T Consensus 257 ~~~~~~~~e~lr~iAi~Rl~lP~~~i~i~~-~r~~~~~~~~~~~l~aGaN~im~g~~~lT~~g~~-----~~~d~~~i~~ 330 (369)
T 1r30_A 257 DNDDVDAFDFIRTIAVARIMMPTSYVRLSA-GREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPE-----EDKDLQLFRK 330 (369)
T ss_dssp SCCCCCHHHHHHHHHHHHHHCTTSEEEEES-SGGGSCHHHHHHHHHHTCCEEECSSBSSSSBCCC-----HHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCEEEEE-HHHHCCHHHHHHHHHHCCCEEEECCCCCCCCCCC-----HHHHHHHHHH
T ss_conf 678999999999999999977886438861-1554187789999971895898668745899979-----7999999998
Q ss_pred HHH
Q ss_conf 311
Q gi|254780670|r 409 LGK 411 (424)
Q Consensus 409 Lg~ 411 (424)
+|-
T Consensus 331 ~G~ 333 (369)
T 1r30_A 331 LGL 333 (369)
T ss_dssp TTC
T ss_pred CCC
T ss_conf 599
No 147
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), structural genomics, joint center for structural genomics; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=30.79 E-value=22 Score=14.27 Aligned_cols=24 Identities=13% Similarity=0.274 Sum_probs=13.4
Q ss_pred EEEEEEEEEECCCCCEEEEEEEEC
Q ss_conf 589986886079784299999984
Q gi|254780670|r 4 NDIIAREVIDSRGSPTIEVDVCLE 27 (424)
Q Consensus 4 ~~i~~r~IlDSRG~PTvEvev~~~ 27 (424)
-.+.-..|+-=--||.+..-+.++
T Consensus 7 ~~~~~~MI~tvtlNPaiD~~~~v~ 30 (331)
T 2ajr_A 7 HHHHHHMVLTVTLNPALDREIFIE 30 (331)
T ss_dssp -----CCEEEEESSCEEEEEEECT
T ss_pred CCCCCCEEEEEECCHHHCEEEEEC
T ss_conf 656788899993876994999978
No 148
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=30.79 E-value=22 Score=14.27 Aligned_cols=89 Identities=13% Similarity=0.034 Sum_probs=44.3
Q ss_pred HHHHHHHHHHCCCCEEEECCCEEEC-CHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC
Q ss_conf 2379988642388368504300002-148885210038652234254530038999999999998798699950788872
Q gi|254780670|r 291 WHGWKILTNKIGSNCQLVGDDLFVT-NPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETE 369 (424)
Q Consensus 291 ~~gw~~l~~~~g~~~~IvGDDL~vT-n~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETe 369 (424)
.-++.++...+|-.+.+++.+-+.. -.+.++...+.....+. ++.-.+...|.. +..++.+-..|+++--+
T Consensus 324 ~~~l~~~L~elG~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~v~~~~d~~e~~---~~i~~~~pDliig~s~~--- 395 (458)
T 1mio_B 324 IIALSKFIIELGAIPKYVVTGTPGMKFQKEIDAMLAEAGIEGS--KVKVEGDFFDVH---QWIKNEGVDLLISNTYG--- 395 (458)
T ss_dssp HHHHHHHHHTTTCEEEEEEESSCCHHHHHHHHHHHHTTTCCSC--EEEESCBHHHHH---HHHHHSCCSEEEESGGG---
T ss_pred HHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCC--EEEECCCHHHHH---HHHHHCCCCEEEECCHH---
T ss_conf 9999999998399003898378987789999999985588786--799798999999---99975399999979367---
Q ss_pred HHHHHHHHHHHCCCHHEECCCC
Q ss_conf 3589989998199801007561
Q gi|254780670|r 370 DHTIADLAVATNCGQIKTGSLA 391 (424)
Q Consensus 370 D~~iaDLAVg~~a~~iK~G~~~ 391 (424)
.++|-..+..++..|.|-
T Consensus 396 ----~~~a~~~~ip~i~~~~P~ 413 (458)
T 1mio_B 396 ----KFIAREENIPFVRFGFPI 413 (458)
T ss_dssp ----HHHHHHHTCCEEECSSCC
T ss_pred ----HHHHHHCCCCEEEECCCC
T ss_conf ----899997599879832751
No 149
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=30.52 E-value=22 Score=14.24 Aligned_cols=29 Identities=14% Similarity=0.203 Sum_probs=19.3
Q ss_pred CCCCCHHHHHHHHHHHHHHCCEEEEECCCC
Q ss_conf 865687899999998765448699776763
Q gi|254780670|r 258 NLELQPNEMASYLANLVDQYPIYSIEDGMS 287 (424)
Q Consensus 258 ~~~~t~~elid~y~~l~~~yPI~sIEDP~~ 287 (424)
|..++.+++-.+ .+|+.+|.++-|+|-..
T Consensus 215 G~~~s~~~~~~l-~~~a~~~~~~ii~De~y 243 (447)
T 3b46_A 215 GKVFTREELTTL-GNICVKHNVVIISDEVY 243 (447)
T ss_dssp CCCCCHHHHHHH-HHHHHHTTCEEEEECTT
T ss_pred CCCCCHHHHHHH-HHHHHCCCEEEECCCCE
T ss_conf 776889999999-86542064687405420
No 150
>3brs_A Periplasmic binding protein/LACI transcriptional regulator; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans isdg}
Probab=30.50 E-value=22 Score=14.24 Aligned_cols=78 Identities=18% Similarity=0.210 Sum_probs=42.6
Q ss_pred CCHHHHHHHHHHHHHHCC-EEEEECCCCCCCHHHHHHHHH-HCCCCEEEECCCEEECCHHHHHHHHHCCCCCEEEECCCC
Q ss_conf 687899999998765448-699776763104237998864-238836850430000214888521003865223425453
Q gi|254780670|r 261 LQPNEMASYLANLVDQYP-IYSIEDGMSEDDWHGWKILTN-KIGSNCQLVGDDLFVTNPERLHKGINEEVANAILIKPNQ 338 (424)
Q Consensus 261 ~t~~elid~y~~l~~~yP-I~sIEDP~~e~D~~gw~~l~~-~~g~~~~IvGDDL~vTn~~rl~~gi~~~~~NailiK~NQ 338 (424)
.+.++-......|+.++| +..|--+-+.--...+..+.+ .+..++.|+|=|......+.++.|. ..-++.--|-+
T Consensus 172 ~~~~~~~~~~~~~l~~~~~~~~I~~~~d~~a~g~~~al~~~g~~~~v~i~g~D~~~~~~~~i~~G~---i~~tv~q~~~~ 248 (289)
T 3brs_A 172 SNYDKAYDGTVELLTKYPDISVMVGLNQYSATGAARAIKDMSLEAKVKLVCIDSSMEQIQYLEEGI---FEAMVVQKPFN 248 (289)
T ss_dssp TCHHHHHHHHHHHHHHCTTEEEEEESSHHHHHHHHHHHHHTTCTTTSEEEEEESCSCC-----CCS---CCEEEECCHHH
T ss_pred CCCHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHCCC---CEEEEECCHHH
T ss_conf 640668999999871389864898178399999999999769999968999889699999987599---62999489999
Q ss_pred HHH
Q ss_conf 003
Q gi|254780670|r 339 IGS 341 (424)
Q Consensus 339 iGT 341 (424)
+|-
T Consensus 249 ~G~ 251 (289)
T 3brs_A 249 IGY 251 (289)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 999
No 151
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=30.24 E-value=23 Score=14.21 Aligned_cols=49 Identities=12% Similarity=0.054 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHHHCC--CEEEEECCCCCCCHHHHHHHHHHHCCCHHEEC
Q ss_conf 003899999999999879--86999507888723589989998199801007
Q gi|254780670|r 339 IGSVSETLNTIEKAQMAG--YPSIISHRSGETEDHTIADLAVATNCGQIKTG 388 (424)
Q Consensus 339 iGTvset~ea~~~a~~~g--~~~ivShRSGETeD~~iaDLAVg~~a~~iK~G 388 (424)
..|..+.+..+.++|-.- ....+|.+.. +-..-...+|.-.||..|-.|
T Consensus 243 ~~~~~~~l~~ia~~Rl~lp~~~i~~~~~~~-~~~~~~~~~~l~~Gan~i~~~ 293 (348)
T 3iix_A 243 KGDFTLTLKMVALTRILLPDSNIPATTAMG-TIVPGGREITLRCGANVIMPN 293 (348)
T ss_dssp CCCHHHHHHHHHHHHHHSTTSBCBCCHHHH-HHSTTHHHHHHTTTCCEECCB
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEEHHH-HCCHHHHHHHHHCCCCEEECC
T ss_conf 959999999999999968987736750343-339889999985678565679
No 152
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=30.11 E-value=23 Score=14.19 Aligned_cols=19 Identities=21% Similarity=0.454 Sum_probs=9.8
Q ss_pred EEEEECCCCCCHHHHHHHH
Q ss_conf 2565148877489998999
Q gi|254780670|r 162 EFMIMPVGAENIREAIRMG 180 (424)
Q Consensus 162 EfmIiP~g~~sf~eal~~~ 180 (424)
=|.++|=|..|+.|.+++.
T Consensus 112 afIvlPGG~GTLdEl~evl 130 (215)
T 2a33_A 112 AFIALPGGYGTLEELLEVI 130 (215)
T ss_dssp EEEECSCCHHHHHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHH
T ss_conf 8899188741288899999
No 153
>3jrn_A AT1G72930 protein; TIR domain arabidopsis thaliana, plant protein; 2.00A {Arabidopsis thaliana}
Probab=28.44 E-value=10 Score=16.76 Aligned_cols=54 Identities=20% Similarity=0.257 Sum_probs=22.3
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHH
Q ss_conf 99998752000013676557644886846899999999997538531110234311046532
Q gi|254780670|r 185 HTLKKELKSKGYSTNVGDEGGFSPNLKTADSALDLIANSIEKAGYNAGKDLLIALDCAASAF 246 (424)
Q Consensus 185 ~~lk~~L~~~g~~t~vgDEGGfap~~~~~eeaL~ll~eAi~~aGy~~g~di~i~lD~AAsef 246 (424)
.+|..-|..+|..+=+ |+..+.|. +.-..-|.+||+++..-. +.++=+.|.|..
T Consensus 26 ~~L~~~L~~~gi~vf~-D~~~~~~G----~~~~~~i~~aI~~S~~~v---vv~S~~y~~S~w 79 (176)
T 3jrn_A 26 SFLYKELVRRSIRTFK-DDKELENG----QRFSPELKSPIEVSRFAV---VVVSENYAASSW 79 (176)
T ss_dssp HHHHHHHHHTTCCEEC-CCC------------------CCTTEEEEE---EEECTTTTTCHH
T ss_pred HHHHHHHHHCCCEEEE-CCCCCCCC----CCCCHHHHHHHHHHEEEE---EEEECCCCCCHH
T ss_conf 9999999978986882-26644588----704576899987315899---994146300276
No 154
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus HB8} SCOP: c.129.1.1
Probab=28.22 E-value=24 Score=13.97 Aligned_cols=23 Identities=17% Similarity=0.304 Sum_probs=10.5
Q ss_pred CCEEEECCCCHHHHHHHHHHHHH
Q ss_conf 52234254530038999999999
Q gi|254780670|r 329 ANAILIKPNQIGSVSETLNTIEK 351 (424)
Q Consensus 329 ~NailiK~NQiGTvset~ea~~~ 351 (424)
++++++=|.=+||+.|.+++..+
T Consensus 98 sda~I~lPGG~GTL~El~~~~~~ 120 (171)
T 1weh_A 98 GAGYLALPGGVGTLAELVLAWNL 120 (171)
T ss_dssp EEEEEECSCCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHH
T ss_conf 99999938972139999999999
No 155
>3lwf_A LIN1550 protein, putative transcriptional regulator; structural genomics, JOI for structural genomics, JCSG; HET: SO4; 2.06A {Listeria innocua}
Probab=27.40 E-value=13 Score=15.88 Aligned_cols=56 Identities=18% Similarity=0.267 Sum_probs=30.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 748999899999999999875200001-36765576448868468999999999975
Q gi|254780670|r 171 ENIREAIRMGAEVFHTLKKELKSKGYS-TNVGDEGGFSPNLKTADSALDLIANSIEK 226 (424)
Q Consensus 171 ~sf~eal~~~~ev~~~lk~~L~~~g~~-t~vgDEGGfap~~~~~eeaL~ll~eAi~~ 226 (424)
....+.+.+....-..+-..|++.|+- ...|..|||...-+-.+-.|.-+.+|++.
T Consensus 48 ~eIAe~~~ip~~~L~kIl~~L~kaGlv~S~rG~~GGy~Lak~p~~ItL~dI~~aveg 104 (159)
T 3lwf_A 48 RSIAQDKNLSEHYLEQLIGPLRNAGIVKSIRGAHGGYVLNGDPEKITAGDIIRTLEG 104 (159)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHTTSEEEECSTTCEEEECSCTTTCBHHHHHHHHSC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCCCCEECCCCCCCCHHHHHHHHCC
T ss_conf 999987890999999999998327938836888888545569302899999999858
No 156
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=26.74 E-value=26 Score=13.79 Aligned_cols=44 Identities=23% Similarity=0.444 Sum_probs=21.7
Q ss_pred HHHHHHHHHCC--EEEE-ECCCCCCCHHHHHHHHHHCCCCEEEECCCEEEC
Q ss_conf 99998765448--6997-767631042379988642388368504300002
Q gi|254780670|r 268 SYLANLVDQYP--IYSI-EDGMSEDDWHGWKILTNKIGSNCQLVGDDLFVT 315 (424)
Q Consensus 268 d~y~~l~~~yP--I~sI-EDP~~e~D~~gw~~l~~~~g~~~~IvGDDL~vT 315 (424)
+|+..+..-+| +-.+ -=+...++...|-+ .|..+-.+|.+|+..
T Consensus 136 ~~lk~l~~~~p~~i~~iptGGI~~~N~~~yl~----aGa~~v~iGs~l~~~ 182 (212)
T 2v82_A 136 QYIKALKAVLPSDIAVFAVGGVTPENLAQWID----AGCAGAGLGSDLYRA 182 (212)
T ss_dssp HHHHHHHTTSCTTCEEEEESSCCTTTHHHHHH----HTCSEEEECTTTCCT
T ss_pred HHHHHHHCCCCCCCEEEEECCCCHHHHHHHHH----CCCEEEEECHHHCCC
T ss_conf 89987526687787797427999899999998----599699987897389
No 157
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C- terminal domain, open alpha-beta structure.; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=26.01 E-value=27 Score=13.69 Aligned_cols=29 Identities=17% Similarity=0.219 Sum_probs=14.5
Q ss_pred CCCCCHHHHHHHHHHHHHHCCEEEEECCCC
Q ss_conf 865687899999998765448699776763
Q gi|254780670|r 258 NLELQPNEMASYLANLVDQYPIYSIEDGMS 287 (424)
Q Consensus 258 ~~~~t~~elid~y~~l~~~yPI~sIEDP~~ 287 (424)
|..++.+++-.+ .+++.+|.+.-|+|-.+
T Consensus 176 G~~~s~~~~~~l-~~~a~~~~~~ii~De~Y 204 (390)
T 1d2f_A 176 GKVWTCDELEIM-ADLCERHGVRVISDEIH 204 (390)
T ss_dssp CCCCCTTHHHHH-HHHHHHTTCEEEEECTT
T ss_pred CEEECHHHHHHH-HHHHHHCEEEEEEECCC
T ss_conf 664039999998-77676530489986563
No 158
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=24.95 E-value=28 Score=13.56 Aligned_cols=84 Identities=17% Similarity=0.129 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHH------HCCCCC
Q ss_conf 99999998756789759885578988864653036643221232222024489987526634984888------225324
Q gi|254780670|r 63 LKAIAFVNDEIRTALLGCDARDQLLIDKIMIDLDGTPNKSRLGANAILGVSLAVSKAAAQTSNLPLYK------YLGGCS 136 (424)
Q Consensus 63 ~~Av~~in~~i~~~L~g~~~~dQ~~iD~~Li~lDgT~nks~lGaNailAvSlA~akA~A~~~~~pLy~------yl~~~~ 136 (424)
+...+++...+.+.|. |..++ +.++|.-.--..-|--..|-|-+++||.-|...++|++- |+....
T Consensus 45 r~H~~~l~~~i~~~l~------~a~i~--~~~id~iavt~gPG~~~~L~vG~~~Ak~la~~~~~P~i~v~Hl~aH~~~~~ 116 (330)
T 2ivn_A 45 EHHARLMKPLLRKALS------EAGVS--LDDIDVIAFSQGPGLGPALRVVATAARALAVKYRKPIVGVNHCIAHVEITK 116 (330)
T ss_dssp HHHHHHHHHHHHHHHH------HHTCC--TTTCCEEEEEEESSCHHHHHHHHHHHHHHHHHTTCCEEEEEHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHH------HCCCC--HHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHH
T ss_conf 9999999999999999------84998--556866888128984102699999999999860876376263999998765
Q ss_pred CCCCCCCCEEECCCCCCC
Q ss_conf 564754300000366455
Q gi|254780670|r 137 AHILPVPLMNILNGGIHA 154 (424)
Q Consensus 137 ~~~lP~P~~NiinGG~HA 154 (424)
-...+.|+.-++.||-|-
T Consensus 117 ~~~~~~pl~llvSGGht~ 134 (330)
T 2ivn_A 117 MFGVKDPVGLYVSGGNTQ 134 (330)
T ss_dssp GGTCCSCEEEEECSSCEE
T ss_pred HCCCCCCEEEEEECCCCE
T ss_conf 336776347788268827
No 159
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=24.82 E-value=28 Score=13.54 Aligned_cols=23 Identities=26% Similarity=0.299 Sum_probs=9.4
Q ss_pred CCCCHHHHHHHHHHCCCCEEEEC
Q ss_conf 31042379988642388368504
Q gi|254780670|r 287 SEDDWHGWKILTNKIGSNCQLVG 309 (424)
Q Consensus 287 ~e~D~~gw~~l~~~~g~~~~IvG 309 (424)
++++|+-+..+.+.++.++.-+|
T Consensus 143 ~~~~~~~~~~~l~~~~~~i~~~G 165 (301)
T 3cky_A 143 SEAVFEKIQPVLSVIGKDIYHVG 165 (301)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEE
T ss_pred CHHHHHHCCHHHHHHCCCEEEEC
T ss_conf 99999867099998489779958
No 160
>2ijr_A Hypothetical protein API92; structural genomics, PSI, protein structure initiative; 2.70A {Yersinia pseudotuberculosis} SCOP: e.66.1.1
Probab=23.83 E-value=16 Score=15.26 Aligned_cols=76 Identities=21% Similarity=0.342 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHCCCCHHHH---------CCCC--------CCCCCCCCCEEECCCCCCCCCCCCCEEEEE-ECCCCCC
Q ss_conf 244899875266349848882---------2532--------456475430000036645567766102565-1488774
Q gi|254780670|r 111 GVSLAVSKAAAQTSNLPLYKY---------LGGC--------SAHILPVPLMNILNGGIHADNALDFQEFMI-MPVGAEN 172 (424)
Q Consensus 111 AvSlA~akA~A~~~~~pLy~y---------l~~~--------~~~~lP~P~~NiinGG~HA~~~l~iQEfmI-iP~g~~s 172 (424)
++-+.+.+.-..-..+|+|+| |+|. .....|.|++.--+-|.-...++.||-++- +-.++.-
T Consensus 15 s~~i~~~~~w~~G~~~P~yr~Ai~qsi~LflAGcaGiLkp~~~~~y~pyP~L~~~G~g~~s~~n~AF~~wl~lL~~~~~L 94 (300)
T 2ijr_A 15 SVFVDIMQQWVTGEEVPLYRHAIQQSIRLFLAGCAGILKPVKCMEYPPFPRLVSHGTGSAVASNLAFQHWLDLLLKDAVL 94 (300)
T ss_dssp HHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHHTSSCCSSCCCCTTCGGGGTTCCCCSCHHHHHHHHHHHHHHTTCBC
T ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 32089999986178872189999999999985202235657777678975776068888881067999999999647888
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 89998999999999
Q gi|254780670|r 173 IREAIRMGAEVFHT 186 (424)
Q Consensus 173 f~eal~~~~ev~~~ 186 (424)
=.+.+++.-++|++
T Consensus 95 d~~~~~~i~~l~~q 108 (300)
T 2ijr_A 95 DGDTIRQIDRIYLQ 108 (300)
T ss_dssp SSHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHH
T ss_conf 88999999999986
No 161
>1xd7_A YWNA; structural genomics, protein structure initiative, winged helix DNA binding, hypothetical protein, PSI; 2.30A {Bacillus subtilis subsp} SCOP: a.4.5.55
Probab=23.68 E-value=29 Score=13.45 Aligned_cols=57 Identities=19% Similarity=0.177 Sum_probs=30.9
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 877489998999999999998752000013676557644886846899999999997
Q gi|254780670|r 169 GAENIREAIRMGAEVFHTLKKELKSKGYSTNVGDEGGFSPNLKTADSALDLIANSIE 225 (424)
Q Consensus 169 g~~sf~eal~~~~ev~~~lk~~L~~~g~~t~vgDEGGfap~~~~~eeaL~ll~eAi~ 225 (424)
......+.+......-..+-+.|++.|+-.+.|..|||.-..+-.+-.|--+.+|++
T Consensus 25 ss~~IAe~~~i~~~~l~kIl~~L~kaGlV~S~~g~GG~~Lar~p~~Itl~dI~~ave 81 (145)
T 1xd7_A 25 SSEIIADSVNTNPVVVRRMISLLKKADILTSRAGVPGASLKKDPADISLLEVYRAVQ 81 (145)
T ss_dssp CHHHHHHHHTSCHHHHHHHHHHHHHTTSEECCSSSSSCEESSCGGGCBHHHHHHHHC
T ss_pred CHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHCCHHHHHHHHC
T ss_conf 999999888919999999999998789078208999830118989867999999983
No 162
>3g13_A Putative conjugative transposon recombinase; resolvase, PSI-II, target 11223F, structural genomics, protein structure initiative; 2.00A {Clostridium difficile 630}
Probab=23.15 E-value=30 Score=13.32 Aligned_cols=131 Identities=10% Similarity=0.095 Sum_probs=74.9
Q ss_pred CCHHHHHHHHHHHHHHCCEEEEECCCCC--------CCHHHHHHHHHHCCCCEEEECCCEEECCHHHHHHHHHCCCCCEE
Q ss_conf 6878999999987654486997767631--------04237998864238836850430000214888521003865223
Q gi|254780670|r 261 LQPNEMASYLANLVDQYPIYSIEDGMSE--------DDWHGWKILTNKIGSNCQLVGDDLFVTNPERLHKGINEEVANAI 332 (424)
Q Consensus 261 ~t~~elid~y~~l~~~yPI~sIEDP~~e--------~D~~gw~~l~~~~g~~~~IvGDDL~vTn~~rl~~gi~~~~~Nai 332 (424)
.+-+.+.+.+.+++.+.+-..+.+-|.+ ++..+|.+|-..+...- -|-+.|....|+.+
T Consensus 23 ~s~~~Q~~~~~~~~~~~~~~~~~~~~~d~~~s~~~~~~R~~l~~ll~~i~~~~---~d~iiv~~~dRl~R---------- 89 (169)
T 3g13_A 23 NSYKSQVQYYTDMIKKNKEWVLADIYADEAITGTQVTKREDFQRMINDCMNGE---IDMVFTKSISRFAR---------- 89 (169)
T ss_dssp GSHHHHHHHHHHHHHTCTTEEEEEEEEEEC------CCSHHHHHHHHHHHTTC---CSEEEESCHHHHCS----------
T ss_pred CCHHHHHHHHHHHHHHCCCCCEEEEEEEECEEECCCCCCHHHHHHHHHHHHCC---CEEEEEEECCCCCC----------
T ss_conf 48999999999999986997223799983626205877989999999998099---70999928881567----------
Q ss_pred EECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHEECCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 42545300389999999999987986999507888723589989998199801007561144899999999999983110
Q gi|254780670|r 333 LIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVATNCGQIKTGSLARSDRIAKYNQLIRIEESLGKQ 412 (424)
Q Consensus 333 liK~NQiGTvset~ea~~~a~~~g~~~ivShRSGETeD~~iaDLAVg~~a~~iK~G~~~R~ER~aKyNrLlrIee~Lg~~ 412 (424)
...+.++.++..+..|..++. ...+-..++.-.+|-+++- ++.+..|+-..-.|..+==++.-..
T Consensus 90 --------~~~~~~~~~~~l~~~gv~l~~-~~~~~~~~~~~~~l~~~i~------~~~ae~E~~~~s~R~k~g~~~~~~~ 154 (169)
T 3g13_A 90 --------NTLDTLKYVRMLKERNIAVYF-EDEKINTLTMDGELLLVVL------SSVAQQEVENISANVKKGLKMKMKR 154 (169)
T ss_dssp --------SHHHHHHHHHHHHTTTCEEEE-TTTTEETTSHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHSCCS
T ss_pred --------CHHHHHHHHHHHCCCCEEEEE-CCCCCCCCCCCHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf --------877765643202268659998-4677468994559999999------9999999999999999999999987
Q ss_pred CCCCCHH
Q ss_conf 4557625
Q gi|254780670|r 413 AKFAGRS 419 (424)
Q Consensus 413 a~~~g~~ 419 (424)
++|.|+.
T Consensus 155 G~~~G~~ 161 (169)
T 3g13_A 155 GELVGFQ 161 (169)
T ss_dssp CSSSCC-
T ss_pred CCCCCCC
T ss_conf 8977888
No 163
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=23.04 E-value=30 Score=13.31 Aligned_cols=14 Identities=0% Similarity=-0.344 Sum_probs=6.8
Q ss_pred HHHHHHCCCEEEEE
Q ss_conf 99999879869995
Q gi|254780670|r 349 IEKAQMAGYPSIIS 362 (424)
Q Consensus 349 ~~~a~~~g~~~ivS 362 (424)
.+++++.|..+.-+
T Consensus 322 ~~ll~~~gV~v~pg 335 (370)
T 2z61_A 322 YKLLKEKFVALTPG 335 (370)
T ss_dssp HHHHHHHCEECEEG
T ss_pred HHHHHHCCEEEEEC
T ss_conf 99998599999806
No 164
>1obr_A Carboxypeptidase T; hydrolase; 2.30A {Thermoactinomyces vulgaris} SCOP: c.56.5.2
Probab=22.53 E-value=31 Score=13.24 Aligned_cols=11 Identities=18% Similarity=-0.031 Sum_probs=4.7
Q ss_pred HHHHHHHHHHH
Q ss_conf 48999999987
Q gi|254780670|r 61 GVLKAIAFVND 71 (424)
Q Consensus 61 gV~~Av~~in~ 71 (424)
|...++..+..
T Consensus 75 ~~~~~l~~~~~ 85 (326)
T 1obr_A 75 TVEMALYTLDL 85 (326)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
T ss_conf 29999999999
No 165
>3mfn_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein structure initiative; HET: MSE; 2.02A {Dyadobacter fermentans}
Probab=22.46 E-value=28 Score=13.55 Aligned_cols=51 Identities=31% Similarity=0.410 Sum_probs=37.1
Q ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 776610256514887748999899999999999875200001367655764488684
Q gi|254780670|r 156 NALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYSTNVGDEGGFSPNLKT 212 (424)
Q Consensus 156 ~~l~iQEfmIiP~g~~sf~eal~~~~ev~~~lk~~L~~~g~~t~vgDEGGfap~~~~ 212 (424)
.+|-||--||-.. ..|-.|++.-+----.+.|.+|++++ .+||+|--+.+-
T Consensus 15 ~~~~~~~~~~~~~-~~~~~~~v~EArryLdnAkeIL~eka-----~Ke~~fY~d~KY 65 (157)
T 3mfn_A 15 ENLYFQGHMIKKQ-ELSAQEAVIEAKRYLNNAKDILRDKG-----GKEDGFYQDSKY 65 (157)
T ss_dssp -----------------CCTHHHHHHHHHHHHHHHHHHHS-----CEETTEECCHHH
T ss_pred CCEEEEHHHHHHH-HCCHHHHHHHHHHHHHHHHHHHHHHC-----CCCCCCCCCHHH
T ss_conf 2102200146576-50388999999999988999999850-----223771145278
No 166
>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A*
Probab=22.31 E-value=31 Score=13.21 Aligned_cols=16 Identities=13% Similarity=-0.151 Sum_probs=10.3
Q ss_pred CCCCHHHHHHHHHHHH
Q ss_conf 6568789999999876
Q gi|254780670|r 259 LELQPNEMASYLANLV 274 (424)
Q Consensus 259 ~~~t~~elid~y~~l~ 274 (424)
+.+|..|+.+++..+-
T Consensus 185 PLksn~eI~~~l~~~~ 200 (391)
T 2gak_A 185 PIKTNLEIVRKLKCST 200 (391)
T ss_dssp ESSCHHHHHHHHHHTT
T ss_pred ECCCHHHHHHHHHHCC
T ss_conf 4068999999998689
No 167
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=22.21 E-value=31 Score=13.19 Aligned_cols=94 Identities=16% Similarity=0.187 Sum_probs=55.6
Q ss_pred CCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCC------------------CCCCHHHHHHHHHHCCCCEEEECC
Q ss_conf 78511114686568789999999876544869977676------------------310423799886423883685043
Q gi|254780670|r 249 KEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGM------------------SEDDWHGWKILTNKIGSNCQLVGD 310 (424)
Q Consensus 249 ~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~------------------~e~D~~gw~~l~~~~g~~~~IvGD 310 (424)
+++...+. ...++++..+.. +++.+..+.+++-|. +++.|+.+..+.+.++.++..+|+
T Consensus 86 ~g~~ivd~--sT~~p~~~~~~~-~~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gG~~~~~~~~~~~l~~~~~~~~~~G~ 162 (296)
T 2gf2_A 86 KGSLLIDS--STIDPAVSKELA-KEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELLGCMGSNVVYCGA 162 (296)
T ss_dssp TTCEEEEC--SCCCHHHHHHHH-HHHHHTTCEEEECCEESHHHHHHHTCEEEEEESCGGGHHHHHHHHTTTEEEEEEEES
T ss_pred CCCEEEEC--CCCCHHHHHHHH-HHHHHCCCEEEECCCCCCHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCEEEECC
T ss_conf 99999989--989999999999-999983998996386378889853953999717662699999999984797699799
Q ss_pred CEEECCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCE
Q ss_conf 000021488852100386522342545300389999999999987986
Q gi|254780670|r 311 DLFVTNPERLHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYP 358 (424)
Q Consensus 311 DL~vTn~~rl~~gi~~~~~NailiK~NQiGTvset~ea~~~a~~~g~~ 358 (424)
-=..+- .|.+|..++- +.+.-+.|+..++++.|..
T Consensus 163 ~G~a~~---------~Kl~~N~~~~----~~~~~~~Ea~~la~~~gid 197 (296)
T 2gf2_A 163 VGTGQA---------AKICNNMLLA----ISMIGTAEAMNLGIRLGLD 197 (296)
T ss_dssp TTHHHH---------HHHHHHHHHH----HHHHHHHHHHHHHHHTTCC
T ss_pred CCHHHH---------HHHHHHHHHH----HHHHHHHHHHHHHHHCCCC
T ss_conf 878899---------9999899999----9999999999999984979
No 168
>1w25_A Stalked-cell differentiation controlling protein; two-component system, response regulator, diguanylate cyclase, ggdef domain; HET: C2E; 2.70A {Caulobacter vibrioides} SCOP: c.23.1.1 c.23.1.1 d.58.29.2 PDB: 2v0n_A* 2wb4_A*
Probab=22.06 E-value=31 Score=13.17 Aligned_cols=57 Identities=23% Similarity=0.312 Sum_probs=37.0
Q ss_pred CCHHHHHHHHHHHHHH-----CC--EEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCEEECCHHHHHHHHHCC
Q ss_conf 6878999999987654-----48--6997767631042379988642388368504300002148885210038
Q gi|254780670|r 261 LQPNEMASYLANLVDQ-----YP--IYSIEDGMSEDDWHGWKILTNKIGSNCQLVGDDLFVTNPERLHKGINEE 327 (424)
Q Consensus 261 ~t~~elid~y~~l~~~-----yP--I~sIEDP~~e~D~~gw~~l~~~~g~~~~IvGDDL~vTn~~rl~~gi~~~ 327 (424)
.++.-+.+.+...+.+ .| +++| |.|.|+.++..+|+ -+||.+...-.+||+..+...
T Consensus 297 ~NR~~~~~~l~~~i~~a~r~~~~~al~~l-------DlD~FK~iND~~GH---~~GD~vL~~va~~L~~~~r~~ 360 (459)
T 1w25_A 297 HNRRYMTGQLDSLVKRATLGGDPVSALLI-------DIDFFKKINDTFGH---DIGDEVLREFALRLASNVRAI 360 (459)
T ss_dssp BCHHHHHHHHHHHHHHHHTSSCCCEEEEE-------EETTHHHHHHHSCH---HHHHHHHHHHHHHHHHTSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEEEEE-------CCCHHCCHHHCCCC---HHHHHHHHHHHHHHHHHCCCC
T ss_conf 12999999889999998742987999996-------04301402113482---678999999999999728988
No 169
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=21.85 E-value=32 Score=13.14 Aligned_cols=29 Identities=10% Similarity=0.143 Sum_probs=16.1
Q ss_pred CCCCCHHHHHHHHHHHHHHCCEEEEECCCC
Q ss_conf 865687899999998765448699776763
Q gi|254780670|r 258 NLELQPNEMASYLANLVDQYPIYSIEDGMS 287 (424)
Q Consensus 258 ~~~~t~~elid~y~~l~~~yPI~sIEDP~~ 287 (424)
|..++.+++-++ .+|+.+|.+.-|+|-..
T Consensus 178 G~v~s~e~~~~i-~~~a~~~~~~vi~De~Y 206 (399)
T 1c7n_A 178 GRVWKKDELQKI-KDIVLKSDLMLWSDEIH 206 (399)
T ss_dssp TBCCCHHHHHHH-HHHHHHSSCEEEEECTT
T ss_pred CHHCCHHHHHHH-HHCCCCCEEEEECCCCC
T ss_conf 831789999998-84124543688513441
No 170
>2gey_A ACLR protein; alpha+beta barrel, oxidoreductase; HET: PG4; 1.80A {Streptomyces galilaeus} SCOP: d.17.4.9
Probab=21.75 E-value=32 Score=13.13 Aligned_cols=68 Identities=13% Similarity=0.232 Sum_probs=43.9
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCC--EEEEECCCCCC
Q ss_conf 4689999999999753853111023431104653202785111146865687899999998765448--69977676310
Q gi|254780670|r 212 TADSALDLIANSIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENLELQPNEMASYLANLVDQYP--IYSIEDGMSED 289 (424)
Q Consensus 212 ~~eeaL~ll~eAi~~aGy~~g~di~i~lD~AAsefy~~~kY~~~~~~~~~t~~elid~y~~l~~~yP--I~sIEDP~~e~ 289 (424)
++.+...-+.+|.++- |+ | +..++|.++ +.+...+.....++..+++..+.+.|| -..|+|-+.+.
T Consensus 5 ~~k~lv~~~~~Awn~~------D~----~-~l~~~~apD-~v~~~~~~~~g~~~~~~~~~~~~~afpd~~~~i~~~i~~g 72 (158)
T 2gey_A 5 ERKALCLEMVAAWNRW------DL----S-GIIKHWSPD-IVHYSEDNEVSSADMVKLMEGGLKAFPDLQLEVKSIMAEE 72 (158)
T ss_dssp HHHHHHHHHHHHHHTT------CT----H-HHHTTEEEE-EEEEETTEEECHHHHHHHHHHHHHHSTTCEEEEEEEEEET
T ss_pred HHHHHHHHHHHHHHCC------CH----H-HHHHHCCCC-EEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEC
T ss_conf 9999999999999768------99----9-999870999-8982799777999999999999986999599899999954
Q ss_pred CH
Q ss_conf 42
Q gi|254780670|r 290 DW 291 (424)
Q Consensus 290 D~ 291 (424)
|+
T Consensus 73 d~ 74 (158)
T 2gey_A 73 DR 74 (158)
T ss_dssp TE
T ss_pred CC
T ss_conf 64
No 171
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg, hyperthermophIle; HET: PLP; 2.33A {Pyrococcus furiosus dsm 3638} SCOP: c.67.1.1
Probab=21.55 E-value=32 Score=13.10 Aligned_cols=29 Identities=17% Similarity=0.265 Sum_probs=14.7
Q ss_pred CCCCCHHHHHHHHHHHHHHCCEEEEECCCC
Q ss_conf 865687899999998765448699776763
Q gi|254780670|r 258 NLELQPNEMASYLANLVDQYPIYSIEDGMS 287 (424)
Q Consensus 258 ~~~~t~~elid~y~~l~~~yPI~sIEDP~~ 287 (424)
|..++.+++.++ .+++.+|.++-|+|-..
T Consensus 188 G~~~s~~~l~~l-~~~a~~~~~~ii~De~y 216 (406)
T 1xi9_A 188 GALYDKKTLEEI-LNIAGEYEIPVISDEIY 216 (406)
T ss_dssp CCCCCHHHHHHH-HHHHHHHTCCEEEECTT
T ss_pred CHHHHHHHHHHH-HHHHHHCCEEEECCCCH
T ss_conf 434228899999-97644148667405202
No 172
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein structure initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=21.35 E-value=32 Score=13.07 Aligned_cols=30 Identities=13% Similarity=0.000 Sum_probs=22.1
Q ss_pred HHHHH-HHHHHHHHHCCCEEEEECCCCCCCH
Q ss_conf 38999-9999999987986999507888723
Q gi|254780670|r 341 SVSET-LNTIEKAQMAGYPSIISHRSGETED 370 (424)
Q Consensus 341 Tvset-~ea~~~a~~~g~~~ivShRSGETeD 370 (424)
.+..- -+++++|+++|+.++|.|-.-+|-+
T Consensus 195 ~I~~ql~~~~~~A~~~G~aI~Ighp~p~Tl~ 225 (261)
T 2qv5_A 195 SILRKLDDLERIARRNGQAIGVASAFDESIA 225 (261)
T ss_dssp HHHHHHHHHHHHHHHHSEEEEEEECCHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCCHHHHH
T ss_conf 9999999999999875958999789989999
No 173
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate synthetase; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 kdops; 1.75A {Neisseria meningitidis serogroup B} PDB: 3fyo_A* 3fyp_A* 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=21.12 E-value=33 Score=13.04 Aligned_cols=111 Identities=19% Similarity=0.114 Sum_probs=59.4
Q ss_pred CCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCEEECCHHHHHHHHHC
Q ss_conf 02785111146865687899999998765448699776763104237998864238836850430000214888521003
Q gi|254780670|r 247 FKKEKYILKGENLELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQLVGDDLFVTNPERLHKGINE 326 (424)
Q Consensus 247 y~~~kY~~~~~~~~~t~~elid~y~~l~~~yPI~sIEDP~~e~D~~gw~~l~~~~g~~~~IvGDDL~vTn~~rl~~gi~~ 326 (424)
|+.+.+............+....+.....++-+....+++++..++ +....-.-++|-.-|+ +|...++...
T Consensus 55 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~s~~~--~n~~ll~~~~-- 126 (280)
T 2qkf_A 55 FDKANRSSIHSYRGVGLEEGLKIFEKVKAEFGIPVITDVHEPHQCQ----PVAEVCDVIQLPAFLA--RQTDLVVAMA-- 126 (280)
T ss_dssp SCCSSCSSSSSCCCSCHHHHHHHHHHHHHHHCCCEEEECCSGGGHH----HHHHHCSEEEECGGGT--TBHHHHHHHH--
T ss_pred EECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH----HHHHHHHHHCCCHHHC--CCHHHHHHHH--
T ss_conf 4079756854222222256899999998750875232102078899----9999988865445540--2338999988--
Q ss_pred CCCCEEEECCCCHHHHHHHHHHHHHHHHCCC-EEEEECCC
Q ss_conf 8652234254530038999999999998798-69995078
Q gi|254780670|r 327 EVANAILIKPNQIGSVSETLNTIEKAQMAGY-PSIISHRS 365 (424)
Q Consensus 327 ~~~NailiK~NQiGTvset~ea~~~a~~~g~-~~ivShRS 365 (424)
+.-.-++++-++..+..+...++....+.|. .+++.||.
T Consensus 127 ~~~~pv~l~tg~~~~~~~~~~~~~~i~s~Gn~~~~l~~~~ 166 (280)
T 2qkf_A 127 KTGNVVNIKKPQFLSPSQMKNIVEKFHEAGNGKLILCERG 166 (280)
T ss_dssp HTCCEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEECC
T ss_pred HCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEC
T ss_conf 5167435327775679999989999986699863888632
No 174
>3bq9_A Predicted rossmann fold nucleotide-binding domain-containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica OS145}
Probab=21.02 E-value=33 Score=13.02 Aligned_cols=25 Identities=28% Similarity=0.355 Sum_probs=17.3
Q ss_pred CCEEEECCCCHHHHHHHHHHHHHHH
Q ss_conf 5223425453003899999999999
Q gi|254780670|r 329 ANAILIKPNQIGSVSETLNTIEKAQ 353 (424)
Q Consensus 329 ~NailiK~NQiGTvset~ea~~~a~ 353 (424)
+.++++=|.-+||+.|.+++..+.+
T Consensus 246 SDAfIaLPGG~GTLDELfEvLTL~Q 270 (460)
T 3bq9_A 246 AHGIVIFPGGAGTAEELLYLLGILM 270 (460)
T ss_dssp CSEEEECSCSHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 7989991898864999999999986
No 175
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=20.60 E-value=33 Score=12.96 Aligned_cols=24 Identities=13% Similarity=0.357 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHCC--EEEEECCCCCC
Q ss_conf 9999998765448--69977676310
Q gi|254780670|r 266 MASYLANLVDQYP--IYSIEDGMSED 289 (424)
Q Consensus 266 lid~y~~l~~~yP--I~sIEDP~~e~ 289 (424)
+.+.+.+++++|. ++.||++|.-.
T Consensus 47 I~~~l~~ii~~~~pd~vaiE~~f~~~ 72 (158)
T 1hjr_A 47 IYAGVTEIITQFQPDYFAIEQVFMAK 72 (158)
T ss_dssp HHHHHHHHHHHHCCSEEEEEECCCCC
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHCC
T ss_conf 99999999971397353698988623
No 176
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, PSI, protein structure initiative; 2.40A {Salmonella typhimurium LT2}
Probab=20.40 E-value=34 Score=12.93 Aligned_cols=50 Identities=18% Similarity=0.313 Sum_probs=24.5
Q ss_pred CCCHHHHHHHHHHHHHHCCEEEEECCC------------------CCCCHHHHHHHHHHCCCCEEEECC
Q ss_conf 568789999999876544869977676------------------310423799886423883685043
Q gi|254780670|r 260 ELQPNEMASYLANLVDQYPIYSIEDGM------------------SEDDWHGWKILTNKIGSNCQLVGD 310 (424)
Q Consensus 260 ~~t~~elid~y~~l~~~yPI~sIEDP~------------------~e~D~~gw~~l~~~~g~~~~IvGD 310 (424)
..++++..+....+ ++..+.+++-|. ++++|+.+..+.+.++.++..+|+
T Consensus 97 T~~p~~~~~~~~~~-~~~g~~~ldaPVsGg~~~A~~g~L~~~~gG~~~~~~~~~~il~~~~~~~~~~G~ 164 (295)
T 1yb4_A 97 SISPIETKRFAQRV-NEMGADYLDAPVSGGEIGAREGTLSIMVGGEQKVFDRVKPLFDILGKNITLVGG 164 (295)
T ss_dssp CCCHHHHHHHHHHH-HTTTEEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHEEEEEEEES
T ss_pred CCCHHHHHHHHHHH-HHCCCEEEECCCCCCHHHHHHCCEEEEEECCHHHHHHHHHHHHHHCCCEEEECC
T ss_conf 89866999999999-972996997898788899974987999947999999999999986598899889
No 177
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=20.23 E-value=34 Score=12.91 Aligned_cols=29 Identities=14% Similarity=0.228 Sum_probs=18.5
Q ss_pred CCCCCHHHHHHHHHHHHHHCCEEEEECCCC
Q ss_conf 865687899999998765448699776763
Q gi|254780670|r 258 NLELQPNEMASYLANLVDQYPIYSIEDGMS 287 (424)
Q Consensus 258 ~~~~t~~elid~y~~l~~~yPI~sIEDP~~ 287 (424)
|..++.+++-++ .+++.+|.++-|+|-.+
T Consensus 188 G~~~s~~~l~~i-~~~a~~~~~~ii~De~y 216 (389)
T 1o4s_A 188 GVVYRREFLEGL-VRLAKKRNFYIISDEVY 216 (389)
T ss_dssp CCCCCHHHHHHH-HHHHHHHTCEEEEECTT
T ss_pred CCCCCHHHHHHH-HHHHHHCCCEEEEECCC
T ss_conf 887899999999-99999829699961235
Done!