RPSBLAST alignment of GI: 254780670 and protein with PDBid: 3n6h
>3n6h_A Mandelate racemase/muconate lactonizing protein; structural genomics, protein structure initiative; 2.30A {Actinobacillus succinogenes} PDB: 3n6j_A Length = 455
Score = 51.6 bits (123), Expect = 3e-07
Identities = 47/360 (13%), Positives = 93/360 (25%), Gaps = 53/360 (14%)
Query: 41 STGIHEAF------ELRDQEKR------YFGKGVLKAIAFVNDEIRTALLGCDARDQLLI 88
G H + L D G + A+ E ++G I
Sbjct: 29 VGGAHSPYFTRNIVILTDNSGHTGVGEAPGGATIENALT----EAIPHVVGRPISILNKI 84
Query: 89 DKIMIDLDGTPNKSRLG---------ANAILGVSLAVSKAAAQTSNLPLYKYLGGCSAHI 139
M + + G NA+ + A+ Q +P+ + LG
Sbjct: 85 VNDMHNGYLDADYDTFGKGAWTFELRVNAVAALEAALLDLMGQFLGVPVAELLGPGKQRD 144
Query: 140 LPVPLMNILNGGIHADNALDFQEFMIMPVGAENIREAIRMGAEVFHTLKKELKSKGYSTN 199
V ++ + D D + E + + ++ SK
Sbjct: 145 -EVTVLGY-LFYVGDDKITDLPYQQPVTGKHEWYDIRRKKAMDTQAVIELAAASK----- 197
Query: 200 VGDEGGFSPNLKTADSALDLIANSIEKAGYNAGKDLLIALDCAASAFFKKEKYILKGENL 259
D GF + K K G G + + F + I N
Sbjct: 198 --DRYGFK-DFKL-------------KGGVFEGSKEIDTVIELKKHF--PDARITLDPNG 239
Query: 260 ELQPNEMASYLANLVDQYPIYSIEDGMSEDDWHGWKILTNKIGSNCQLVGDDLFVTNPER 319
+E A L ++ Y+ + + E+ + G +I+ ++ TN
Sbjct: 240 CWSLDE-AIQLCKGLNDVLTYAEDPCIGENGYSGREIMAEFRRRTGIPTATNMIATNWRE 298
Query: 320 LHKGINEEVANAILIKPNQIGSVSETLNTIEKAQMAGYPSIISHRSGETEDHTIADLAVA 379
+ + I + +++ + G H + + V
Sbjct: 299 MCH-AIMLQSVDIPLADPHFWTLTGASRVAQLCNEWGLT-WGCHSNNHFDISLAMFSHVG 356