HHsearch alignment for GI: 254780673 and conserved domain: COG1038

Probab=98.01  E-value=1.7e-05  Score=58.08  Aligned_cols=80  Identities=20%  Similarity=0.294  Sum_probs=46.3

Q ss_pred             HHHHHHHHHHHHHCCCCCE-EEEECC-CCCCCCHHHHHHHHHHCCCE-EEEECCCCCCCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             8888888875310046752-797330-06857999999999871989-99957887676789999999996776428982
Q gi|254780673|r  349 GMTYATKAAIELEKNGIDA-ELIDLR-TIRPMDWQTIFESVKKTGRL-VTVEEGYPQSSVGSTIANQVQRKVFDYLDAPI  425 (467)
Q Consensus       349 ~~~~a~~aa~~L~~~gi~~-~vid~r-~l~Pld~~~i~~sv~kt~~~-i~vee~~~~gg~g~~i~~~i~e~~f~~L~~p~  425 (467)
T Consensus       692 ~L~YY~~lA~el~~~GaHIlaIKDMAGLLKP~AA~~Li~aLr~~~dlPIHlHTHD-TsG~~~at~~aA~~AGvDivD~A~  770 (1149)
T COG1038         692 TLDYYVKLAKELEKAGAHILAIKDMAGLLKPAAAYRLISALRETVDLPIHLHTHD-TSGNGVATYLAAVEAGVDIVDVAM  770 (1149)
T ss_pred             CHHHHHHHHHHHHHCCCCEEEEHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCC-CCCCHHHHHHHHHHCCCCHHHHHH
T ss_conf             4899999999999667727876333421476999999999987448844875167-887189999999983863666654


Q ss_pred             EEEC
Q ss_conf             9971
Q gi|254780673|r  426 LTIT  429 (467)
Q Consensus       426 ~ri~  429 (467)
T Consensus       771 ~sms  774 (1149)
T COG1038         771 ASMS  774 (1149)
T ss_pred             HHCC
T ss_conf             4214