HHsearch alignment for GI: 254780673 and conserved domain: COG1726
>COG1726 NqrA Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA [Energy production and conversion].
Probab=90.90 E-value=0.36 Score=27.78 Aligned_cols=40 Identities=28% Similarity=0.412 Sum_probs=32.9
Q ss_pred EEECCCCCEECCCCEEEEEECCCCE--EEEECCCCCEEEEEEECC
Q ss_conf 7741789762589859999537533--343177786898998237
Q gi|254780673|r 21 KWKKNEGDLIKQGDIIYEVETDKAV--MEVESIDEGILGKILCPN 63 (467)
Q Consensus 21 ~W~vk~GD~V~~gd~l~eiETDKat--~EV~A~~~G~i~~ilv~e 63 (467)
T Consensus 42 ~mkV~~gD~VkkGq~LfE---dKknpgv~~TapvsG~V~aI~RG~ 83 (447)
T COG1726 42 SMKVREGDAVKKGQVLFE---DKKNPGVVFTAPVSGKVTAIHRGE 83 (447)
T ss_pred CCEECCCCEEECCCEEEE---CCCCCCEEEECCCCCEEEEEECCC
T ss_conf 415334772202653112---156898589456782588864465