HHsearch alignment for GI: 254780673 and conserved domain: PRK05261

Probab=97.34  E-value=0.0045  Score=41.10  Aligned_cols=256  Identities=17%  Similarity=0.239  Sum_probs=150.0

Q ss_pred             HHHHHHHHHHHCCCCCEE-EEECCC-C--CCCCCCCCCCCHHH-H-CC-------CCCEECCCCCHHHHHHHHHHHHHCC
Q ss_conf             012235544311365069-993243-4--45886653236475-4-08-------1110116666278998999988718
Q gi|254780673|r  144 EALRDAIAEEMRRDKDVF-IMGEEV-A--EYQGAYKVTQGLLQ-E-FG-------CERVIDTPITEHGFAGIGIGASFAG  210 (467)
Q Consensus       144 ea~~~a~~e~m~~d~~~~-~~gedv-~--~~~g~f~~t~gl~~-~-fg-------~~R~~d~pi~E~~~~G~a~G~A~~G  210 (467)
T Consensus       395 ~~lg~~lrdvi~~Np~~fRvf~PDEt~SNRL~av~e~t~r~w~~~~~~~d~~la~~GRVie-~LSEH~cqGwleGYlLTG  473 (786)
T PRK05261        395 RVLGKYLRDVIKLNPDNFRIFGPDETASNRLQAVFEVTDRQWMAEILPPDEHLSPDGRVME-VLSEHLCEGWLEGYLLTG  473 (786)
T ss_pred             HHHHHHHHHHHHHCCCCCCEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH-HHHHHHHHHHHHHHHCCC
T ss_conf             9999999999996887661038865433441789987477403666785322477874656-556888878876532158


Q ss_pred             CCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCC-CC-----CCCEEEEEECCCCC---CCCHHHHHH-H-HHHHHHH-C
Q ss_conf             86445-6666678999999999878867421177-67-----88879983024457---644443321-6-8876322-0
Q gi|254780673|r  211 LKPIV-EFMTFNFAMQAIDQIINSAAKTRYMSGG-QI-----TTSIVFRGPNGAAA---RVAAQHSQC-Y-AAWYSHV-P  277 (467)
Q Consensus       211 ~~Piv-~~~~~~f~~~a~dqi~n~~ak~~~~~gg-~~-----~~p~v~r~p~G~~~---~~g~~Hs~~-~-~~~~~~i-P  277 (467)
T Consensus       474 RhGlf~sYEA--F-~~ivdSM~~Qh~KwLk~~~e~~WR~pi~SlN~llT---S~~WrQdHNGfSHQDPgfid~vl~k~~~  547 (786)
T PRK05261        474 RHGFFSSYEA--F-IHIVDSMFNQHAKWLKVAREIPWRKPIPSLNYLLT---SHVWRQDHNGFSHQDPGFIDHVANKKPD  547 (786)
T ss_pred             CCCCEEEHHH--H-HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE---ECEEECCCCCCCCCCCHHHHHHHHCCCC
T ss_conf             7764211898--9-99999999999999998652778898766126862---0113336787666796599998744888


Q ss_pred             CCEEEEEECCHHCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCC---CCC----EECCCCCEEEEE--CC--CCCEEEEH
Q ss_conf             31386652210001055565413783476402123333345334---663----121443114443--16--87458602
Q gi|254780673|r  278 GLKVVIPYTASDAKGLLKAAIRDPNPVIFLENEILYGSSFEVPM---VDD----LVIPIGRARIHR--QG--SDVTIISF  346 (467)
Q Consensus       278 gl~V~~P~~~~d~~~ll~~ai~~~~Pvi~le~~~ly~~~~~~p~---~~~----~~~p~Gk~~i~~--~G--~ditii~~  346 (467)
T Consensus       548 ~~RvYlPpDaNtlLav~d~clrsr~~iNviV-----a~Kqp~pq~ls~eeA~~h~~~G~~iW~wAS~~~~~ePDVVla~~  622 (786)
T PRK05261        548 VIRVYLPPDANTLLAVADHCLRSRNYINVIV-----AGKQPRPQWLSMDEARKHCTKGLGIWDWASNDDGEEPDVVLACA  622 (786)
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHCCEEEEEE-----ECCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCEEEECC
T ss_conf             4799889966469999999997249168999-----77877774269999999997167386433468899999899816


Q ss_pred             H-HHHHHHHHHHHHHHCC--CCCEEE---EECCCCC-----C--CCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHH
Q ss_conf             5-7888888887531004--675279---7330068-----5--799999999987198999957887676789999999
Q gi|254780673|r  347 G-IGMTYATKAAIELEKN--GIDAEL---IDLRTIR-----P--MDWQTIFESVKKTGRLVTVEEGYPQSSVGSTIANQV  413 (467)
Q Consensus       347 G-~~~~~a~~aa~~L~~~--gi~~~v---id~r~l~-----P--ld~~~i~~sv~kt~~~i~vee~~~~gg~g~~i~~~i  413 (467)
T Consensus       623 Gd~pt~E~lAA~~lLr~~~P~lkiR~VNVvDL~~L~~~~~hphgLsd~~Fd~lFt~DkpViFafHGY-----p~lI~~L~  697 (786)
T PRK05261        623 GDVPTLETLAAVDLLREHFPDLKIRVVNVVDLMKLQPPSEHPHGLSDREFDALFTTDKPVIFAFHGY-----PWLIHRLT  697 (786)
T ss_pred             CCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECHHCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCC-----HHHHHHHH
T ss_conf             7466799999999999868884799999875031179887977799899997568998879980697-----89999986


Q ss_pred             HHH
Q ss_conf             996
Q gi|254780673|r  414 QRK  416 (467)
Q Consensus       414 ~e~  416 (467)
T Consensus       698 ~~R  700 (786)
T PRK05261        698 YRR  700 (786)
T ss_pred             CCC
T ss_conf             478