HHsearch alignment for GI: 254780673 and conserved domain: PRK05352

>PRK05352 Na(+)-translocating NADH-quinone reductase subunit A; Provisional.

Probab=96.02  E-value=0.0059  Score=40.28  Aligned_cols=43  Identities=30%  Similarity=0.438  Sum_probs=35.5

Q ss_pred             EEEEEEECCCCCEECCCCEEEEEECCCCEEE--EECCCCCEEEEEEECCC
Q ss_conf             7898774178976258985999953753334--31777868989982378
Q gi|254780673|r   17 GNIAKWKKNEGDLIKQGDIIYEVETDKAVME--VESIDEGILGKILCPNG   64 (467)
Q Consensus        17 G~i~~W~vk~GD~V~~gd~l~eiETDKat~E--V~A~~~G~i~~ilv~eG   64 (467)
T Consensus        39 gl~pkl~VkeGD~V~~Gq~Lf~---dK~~~~v~~~SPvSG~V~~I~--rG   83 (448)
T PRK05352         39 GLKPTMKVKEGDKVKKGQPLFE---DKKNPGVKFTAPASGTVSAIN--RG   83 (448)
T ss_pred             CCCCCEEECCCCEECCCCEEEE---CCCCCCEEEECCCCEEEEEEE--CC
T ss_conf             9998568557999747985565---389896269688982995220--58