HHsearch alignment for GI: 254780673 and conserved domain: PRK09405
>PRK09405 aceE pyruvate dehydrogenase subunit E1; Reviewed.
Probab=98.16 E-value=6e-05 Score=54.27 Aligned_cols=303 Identities=13% Similarity=0.173 Sum_probs=153.6
Q ss_pred HHHHHHHHHHHCCCC----CEEEEECCCCC-CC--------CCCCCC--------CCHHHHC--C-CCCEECCCCCHHHH
Q ss_conf 012235544311365----06999324344-58--------866532--------3647540--8-11101166662789
Q gi|254780673|r 144 EALRDAIAEEMRRDK----DVFIMGEEVAE-YQ--------GAYKVT--------QGLLQEF--G-CERVIDTPITEHGF 199 (467)
Q Consensus 144 ea~~~a~~e~m~~d~----~~~~~gedv~~-~~--------g~f~~t--------~gl~~~f--g-~~R~~d~pi~E~~~ 199 (467)
T Consensus 496 mAFvRiL~~L~r-dk~ig~rIVPIvPDEARTFGMeglFrq~GIys~~GQ~Y~p~D~~~l~~YkEs~~GQiLeeGI~Eaga 574 (886)
T PRK09405 496 MAFVRILNILLK-DKEIGKRIVPIIPDEARTFGMEGLFRQIGIYNPHGQKYTPVDRDQVMYYKEDKDGQILQEGINEAGA 574 (886)
T ss_pred HHHHHHHHHHHH-CCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHCHHHHHH
T ss_conf 899999999971-8144660575458630146828778643766774122670132666642108887142211123416
Q ss_pred HHH--HHH--HHHCCC--CCHHHHHHHH-H-HHHHHHHHHHHHHHHHHHCCCCCCCC-EEEEEECCC--CCCCCHHHHHH
Q ss_conf 989--999--887188--6445666667-8-99999999987886742117767888-799830244--57644443321
Q gi|254780673|r 200 AGI--GIG--ASFAGL--KPIVEFMTFN-F-AMQAIDQIINSAAKTRYMSGGQITTS-IVFRGPNGA--AARVAAQHSQC 268 (467)
Q Consensus 200 ~G~--a~G--~A~~G~--~Piv~~~~~~-f-~~~a~dqi~n~~ak~~~~~gg~~~~p-~v~r~p~G~--~~~~g~~Hs~~ 268 (467)
T Consensus 575 ~~s~~AagtSys~~g~pmIPfy--i~YsmFGfQRvgDl~--------Wa-agD~~aRGFLiGaTaGRTTL~GEGLQH-qD 642 (886)
T PRK09405 575 MASWIAAATSYSTHNLPMIPFY--IYYSMFGFQRIGDLA--------WA-AGDQQARGFLLGGTAGRTTLNGEGLQH-ED 642 (886)
T ss_pred HHHHHHHHHHHHHCCCCCEEEE--EEECCHHHHHHHHHH--------HH-HHHHCCCEEEEEECCCCCEECCCCCCC-CC
T ss_conf 9999987532653598530366--763000454665788--------88-633125728984078873227411036-67
Q ss_pred H--HHHHHHHCCCEEEEEECCHHCCCHHHHHHH----CCCCEEEECCCCCCCCCCCCCCCCCEEC-CCCCE-EEEEC---
Q ss_conf 6--887632203138665221000105556541----3783476402123333345334663121-44311-44431---
Q gi|254780673|r 269 Y--AAWYSHVPGLKVVIPYTASDAKGLLKAAIR----DPNPVIFLENEILYGSSFEVPMVDDLVI-PIGRA-RIHRQ--- 337 (467)
Q Consensus 269 ~--~~~~~~iPgl~V~~P~~~~d~~~ll~~ai~----~~~Pvi~le~~~ly~~~~~~p~~~~~~~-p~Gk~-~i~~~--- 337 (467)
T Consensus 643 GhS~l~astiPnc~sYDPafayElavIv~~gl~rMy~~~edvfYYi--T~~NEny~~P~~P~g~eegIikG~Y~~~~~~~ 720 (886)
T PRK09405 643 GHSHILASTIPNCISYDPAFAYEVAVIVQDGLRRMYGEQENVFYYI--TVMNENYVQPAMPEGAEEGIIKGMYKLETGEG 720 (886)
T ss_pred CCCHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE--ECCCCCCCCCCCCCCHHHHHHHCEEECCCCCC
T ss_conf 7554788636776020633788999999999999953887649999--74676566867898628878632044233678
Q ss_pred -CCCCEEEEHHHHHHHHHHHHHHHHCC-CCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCC-------CCCH---
Q ss_conf -68745860257888888887531004-67527973300685799999999987198999957887-------6767---
Q gi|254780673|r 338 -GSDVTIISFGIGMTYATKAAIELEKN-GIDAELIDLRTIRPMDWQTIFESVKKTGRLVTVEEGYP-------QSSV--- 405 (467)
Q Consensus 338 -G~ditii~~G~~~~~a~~aa~~L~~~-gi~~~vid~r~l~Pld~~~i~~sv~kt~~~i~vee~~~-------~gg~--- 405 (467)
T Consensus 721 ~~~~vqLlgSG~il~evl~Aa~~L~~d~gV~adVWSvTS~~ELrRd~~--~~eR~N~L~P~~~~r~~yv~~~l~~~~gPv 798 (886)
T PRK09405 721 GKGKVQLLGSGTILREVIEAAEILAKDYGVAADVWSVTSFNELARDGQ--DVERWNMLHPTEEPRVPYVTQVLNDAQGPV 798 (886)
T ss_pred CCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHH--HHHHHHHCCCCCCCCCCHHHHHHCCCCCCE
T ss_conf 896179993549899999999999883198621895488899999899--999997039987777678999847999987
Q ss_pred --HHHHHHHHHHHHHHHCCCCCEEECCCCC-CCCCCHHHHHHCCCCHHHHHHHHHHHHCCC
Q ss_conf --8999999999677642898299717778-888896676560899899999999985020
Q gi|254780673|r 406 --GSTIANQVQRKVFDYLDAPILTITGRDV-PMPYAANLEKLALPNVDEIIESVESICYKR 463 (467)
Q Consensus 406 --g~~i~~~i~e~~f~~L~~p~~ri~~~d~-p~P~~~~le~~~~p~~~~I~~av~~v~~~~ 463 (467)
T Consensus 799 vAasDYmr~~~dqIr~~vp~~y~~LGTDGFGRSDTR~~LR~fFEVD~~~IvvaaL~aLa~~ 859 (886)
T PRK09405 799 IAATDYMKAFAEQIRAFVPRDYVVLGTDGFGRSDTREALRRFFEVDAYYVVVAALKALADE 859 (886)
T ss_pred EEECHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHC
T ss_conf 9966768764999997468986563588887542479999873637899999999999985