HHsearch alignment for GI: 254780673 and conserved domain: TIGR01349

>TIGR01349 PDHac_trf_mito pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; InterPro: IPR006257 This group of sequences represent one of several closely related clades of the dihydrolipoamide acetyltransferase subunit of the pyruvate dehydrogenase complex. It includes sequences from mitochondria and from alpha and beta branches of the proteobacteria, as well as from some other bacteria, but not the Gram-positive bacteria.; GO: 0004742 dihydrolipoyllysine-residue acetyltransferase activity, 0006090 pyruvate metabolic process, 0045254 pyruvate dehydrogenase complex.
Probab=99.96  E-value=1.3e-29  Score=227.42  Aligned_cols=157  Identities=39%  Similarity=0.559  Sum_probs=112.0

Q ss_pred             EEECCCCCCCCCEEEEEEEECCCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCC
Q ss_conf             56678888881157898774178976258985999953753334317778689899823788513269758999437777
Q gi|254780673|r    4 LVTMPSLSPTMTEGNIAKWKKNEGDLIKQGDIIYEVETDKAVMEVESIDEGILGKILCPNGTKNVKVNTPIAAILQEGET   83 (467)
Q Consensus         4 ei~mP~lgesm~eG~i~~W~vk~GD~V~~gd~l~eiETDKat~EV~A~~~G~i~~ilv~eG~e~V~VG~~ia~i~~ege~   83 (467)
T Consensus         1 ~i~MPaLSPTM~~Gnla~W~KKeGDkv~~GDViaEIETDKAtm~~e~~~eGyLAKILv~eGTkdvpvn~pIAV~v~~~eD   80 (584)
T TIGR01349         1 KITMPALSPTMTEGNLAKWLKKEGDKVKPGDVIAEIETDKATMEFEAQEEGYLAKILVPEGTKDVPVNKPIAVLVEEKED   80 (584)
T ss_pred             CCCCCCCCCCCCCCCCEEEEECCCCEECCCCEEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEECCCCH
T ss_conf             98888887154656210244113777168876988745842674576268578888652478576358616896068011


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH------------H--HHHHH
Q ss_conf             211222233212344222332233322233221000000112333310000000000000------------0--12235
Q gi|254780673|r   84 ALDIDKMLLEKPDVAISPSSKNTTLVFSNEDNDKVDHQKSKNDIQDSSFAHAPTSSITVR------------E--ALRDA  149 (467)
Q Consensus        84 a~~~~~~~a~~~~aa~aaa~~~~s~~~~~a~~~a~~~~~a~~~~~~~~~~~~~~~~~TvR------------e--a~~~a  149 (467)
T Consensus        81 ~~~a~~~~~~~~~a~~TP~~~pAp~P~~~a~PPtPsa~~~~~~YP~H~~V~lPALSP~M~~G~~~~W~KK~G~~~~~GD~  160 (584)
T TIGR01349        81 VADAFKDYKLEDSASSTPVAEPAPKPKEKAPPPTPSAKKSTKSYPAHKVVLLPALSPSMETGTVARWEKKVGDKLKEGDL  160 (584)
T ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEECCCCCCCCCCCCE
T ss_conf             88998088700104788877787787223765586445778888864323245657655667400001345762233752


Q ss_pred             HHHHHCCCCCEE
Q ss_conf             544311365069
Q gi|254780673|r  150 IAEEMRRDKDVF  161 (467)
Q Consensus       150 ~~e~m~~d~~~~  161 (467)
T Consensus       161 ~AE-~ETDKAT~  171 (584)
T TIGR01349       161 LAE-VETDKATI  171 (584)
T ss_pred             EEE-EECCCEEE
T ss_conf             555-42252022