HHsearch alignment for GI: 254780673 and conserved domain: TIGR01349
>TIGR01349 PDHac_trf_mito pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; InterPro: IPR006257 This group of sequences represent one of several closely related clades of the dihydrolipoamide acetyltransferase subunit of the pyruvate dehydrogenase complex. It includes sequences from mitochondria and from alpha and beta branches of the proteobacteria, as well as from some other bacteria, but not the Gram-positive bacteria.; GO: 0004742 dihydrolipoyllysine-residue acetyltransferase activity, 0006090 pyruvate metabolic process, 0045254 pyruvate dehydrogenase complex.
Probab=99.84 E-value=1.1e-20 Score=164.67 Aligned_cols=337 Identities=22% Similarity=0.280 Sum_probs=172.7
Q ss_pred EEEECCCCCCCCCEEEEEEEECCCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEEECCCC
Q ss_conf 35667888888115789877417897625898599995375333431777868989982378851326975899943777
Q gi|254780673|r 3 ILVTMPSLSPTMTEGNIAKWKKNEGDLIKQGDIIYEVETDKAVMEVESIDEGILGKILCPNGTKNVKVNTPIAAILQEGE 82 (467)
Q Consensus 3 ~ei~mP~lgesm~eG~i~~W~vk~GD~V~~gd~l~eiETDKat~EV~A~~~G~i~~ilv~eG~e~V~VG~~ia~i~~ege 82 (467)
T Consensus 128 ~~V~lPALSP~M~~G~~~~W~KK~G~~~~~GD~~AE~ETDKAT~~F~~~~~GYLAKILVP~GT~~~~~~~P~CIIV~~~~ 207 (584)
T TIGR01349 128 KVVLLPALSPSMETGTVARWEKKVGDKLKEGDLLAEVETDKATIDFEVEDEGYLAKILVPEGTRDVQLNTPLCIIVKKKE 207 (584)
T ss_pred CEEECCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEEECCCEEECCEECCCCEEEEEECCCCCCCCCCCCCEEEEECCCC
T ss_conf 32324565765566740000134576223375255542252022214635761899872888756637886489972600
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf 72112222332123442223322333---222332210000001123333100000000000000122355443113650
Q gi|254780673|r 83 TALDIDKMLLEKPDVAISPSSKNTTL---VFSNEDNDKVDHQKSKNDIQDSSFAHAPTSSITVREALRDAIAEEMRRDKD 159 (467)
Q Consensus 83 ~a~~~~~~~a~~~~aa~aaa~~~~s~---~~~~a~~~a~~~~~a~~~~~~~~~~~~~~~~~TvRea~~~a~~e~m~~d~~ 159 (467)
T Consensus 208 D~~~FADY~~~E~~~~~~q~~~~~~~~~s~~~~a~~~~~~~~~~~~~~~~~~~~---~GriFAsP-LAk~LA~e----kg 279 (584)
T TIGR01349 208 DIDKFADYRVEEVSDLKSQTAPPSAPHYSKKSPAPAEQAPEPSSPAPLSDKESK---DGRIFASP-LAKKLAKE----KG 279 (584)
T ss_pred CHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCEECCH-HHHHHHHH----CC
T ss_conf 123442776311024667788777787677756776546788877666556688---88178276-89888875----39
Q ss_pred EEEEECCCCCCCCCCCCCCCHHHHCCCC-------CEECCCCCHHHHHHHHHH----HHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 6999324344588665323647540811-------101166662789989999----88718864456666678999999
Q gi|254780673|r 160 VFIMGEEVAEYQGAYKVTQGLLQEFGCE-------RVIDTPITEHGFAGIGIG----ASFAGLKPIVEFMTFNFAMQAID 228 (467)
Q Consensus 160 ~~~~gedv~~~~g~f~~t~gl~~~fg~~-------R~~d~pi~E~~~~G~a~G----~A~~G~~Piv~~~~~~f~~~a~d 228 (467)
T Consensus 280 idL--~~v~GsGP~GRI~K~Die~~~p~~aakPaG~~~~a~~~~~~a~tp~~~tssttA~~~~~~---~~tg~Y~d~P~s 354 (584)
T TIGR01349 280 IDL--SAVAGSGPNGRIVKKDIESFVPKSAAKPAGKPASANEAAAAAKTPAAKTSSTTAAKAAAP---VSTGSYEDVPLS 354 (584)
T ss_pred CCC--CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC---CCCCCEEECCCC
T ss_conf 722--122240867847743110268754316665413331112036677532332223567788---888644667888
Q ss_pred HHHHHHHHHHHHCCCCCCCCEE---EEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEE---------ECCHHC--CCHH
Q ss_conf 9998788674211776788879---9830244576444433216887632203138665---------221000--1055
Q gi|254780673|r 229 QIINSAAKTRYMSGGQITTSIV---FRGPNGAAARVAAQHSQCYAAWYSHVPGLKVVIP---------YTASDA--KGLL 294 (467)
Q Consensus 229 qi~n~~ak~~~~~gg~~~~p~v---~r~p~G~~~~~g~~Hs~~~~~~~~~iPgl~V~~P---------~~~~d~--~~ll 294 (467)
T Consensus 355 niRk~IA~RL~eS--Kq~iPHyYvs~~~~~-----------~~LL~LR~---~LNa~~~~~~GkP~~KlSVND~iikA~a 418 (584)
T TIGR01349 355 NIRKIIAKRLLES--KQTIPHYYVSVECNV-----------DKLLKLRK---ELNAMAEEDDGKPRYKLSVNDFIIKASA 418 (584)
T ss_pred CHHHHHHHHHHHH--HCCCCEEEEEEEEEH-----------HHHHHHHH---HHHHHCCCCCCCCEEEEEECHHHHHHHH
T ss_conf 3268999999887--568860799998861-----------06899999---9984467888885056660007999999
Q ss_pred HHHHHCCCC-EEEEC--CCCCCCCCCCCCC---CCC-EECCCCCEEEEECCCCCEEEEHH-HHHHHHHHHHHH-HHC---
Q ss_conf 565413783-47640--2123333345334---663-12144311444316874586025-788888888753-100---
Q gi|254780673|r 295 KAAIRDPNP-VIFLE--NEILYGSSFEVPM---VDD-LVIPIGRARIHRQGSDVTIISFG-IGMTYATKAAIE-LEK--- 362 (467)
Q Consensus 295 ~~ai~~~~P-vi~le--~~~ly~~~~~~p~---~~~-~~~p~Gk~~i~~~G~ditii~~G-~~~~~a~~aa~~-L~~--- 362 (467)
T Consensus 419 ~Al~~vP~aN~~W~~~~~~Ir~y~~vDiSVAVatP~GliTP-----IVr~a~~Kgl~~IS~e~K~L~~rAr~~KL~P~Ef 493 (584)
T TIGR01349 419 LALREVPEANSSWTDVDDVIRRYKNVDISVAVATPDGLITP-----IVRNADAKGLSEISNEVKDLAKRARENKLKPEEF 493 (584)
T ss_pred HHHHHCCCEEEEECCCCCEEEEECEEEEEEEEECCCCCCCC-----CEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 99872990253534777606861201488776568882545-----0721572467899999999999986437883245
Q ss_pred CCCCEEEEECC
Q ss_conf 46752797330
Q gi|254780673|r 363 NGIDAELIDLR 373 (467)
Q Consensus 363 ~gi~~~vid~r 373 (467)
T Consensus 494 qGGTftISNLG 504 (584)
T TIGR01349 494 QGGTFTISNLG 504 (584)
T ss_pred CCCCEEEECCC
T ss_conf 48875671231