HHsearch alignment for GI: 254780674 and conserved domain: COG4845
>COG4845 Chloramphenicol O-acetyltransferase [Defense mechanisms].
Probab=98.65 E-value=7e-07 Score=65.73 Aligned_cols=184 Identities=13% Similarity=0.145 Sum_probs=133.3
Q ss_pred CCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCC
Q ss_conf 01232100000122233204678777566555432014665543222101110011000000001123441012556654
Q gi|254780674|r 211 QSKQTIPHFYVSIDCNIDNLLSLREQMNRTLQFHREEISNKISVNDIILKAFALAMIQVPEANVSWTTNAMIRHKHIDIS 290 (423)
Q Consensus 211 ~S~~~iPh~~~~~evd~t~l~~~R~~l~~~~~~~~~~~~~kit~~~~l~kA~a~AL~~~P~~Na~~~~~~i~~~~~vnIg 290 (423)
T Consensus 24 R~-~~~p~y~i~~~LDvtn~~~~vk~-------------~~l~Ff~a~l~avtr~~n~~~EFRlr~~~~~~~~~d~v~p~ 89 (219)
T COG4845 24 RL-LQYPHYDINLQLDVTNFYGYVKE-------------NGLSFFPALLYAVTRCANRHQEFRLRIQNGQLGYWDNVPPM 89 (219)
T ss_pred HH-CCCCEEEEEEEEEHHHHHHHHHH-------------CCCCCHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEECCCCC
T ss_conf 32-15505863110101678899997-------------49750699999999985220876753127836896258861
Q ss_pred EEEEECC-CCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE-EECCCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf 1565146-420203414554798999998766654310233461003772389-85153214221013115887168984
Q gi|254780674|r 291 VAVSIPG-GIVTPIIRQADQKSILDISLEVKQLAQRAKQRKLKPEEYQGGTTS-ISNMGMLGINSFCAVINPPQSTILAI 368 (423)
Q Consensus 291 iAv~~~~-GL~vPvIk~ad~~~l~~i~~~~~~l~~~ar~~~l~~~d~~ggtft-iSNlG~~g~~~~~pii~~pq~aILgv 368 (423)
T Consensus 90 ~tv~~~~~e~Fs~l~~e-~~~~~~dF~q~y~~~ie~~~~~~~~~~--k~~~~~~~~~~s~lPWlsFtslS~~~~-----~ 161 (219)
T COG4845 90 YTVFHGETETFSVLWTE-YQEDYEDFAQLYIEDIEQYGANNYERA--KDPTPCDVYIFSNLPWLSFTSLSHHYR-----R 161 (219)
T ss_pred EEEECCCCCEEEEEECC-CCCCHHHHHHHHHHHHHHHCCCCCCCC--CCCCCCEEEEECCCCCCCEEEEEEECC-----C
T ss_conf 68882798579998324-440489999999999998434765335--789865068860456530236631035-----7
Q ss_pred CCCEEEEEE-------ECCEEEEEEEEEEEEEEEECEEEHHHHHHHHHHHHHHHCCHHH
Q ss_conf 463123587-------7893789548898985200114028899999999998719889
Q gi|254780674|r 369 GAGEKKVVF-------QNEEIKVATIMNATLSADHRSVDGAIASKLLAKFKEYIENPVW 420 (423)
Q Consensus 369 G~~~~~~~~-------~~~~i~~~~~~~ltls~DHRvidGa~aa~Fl~~~~~~le~P~~ 420 (423)
T Consensus 162 ~k~~~~PiF~~Grf~~~~Gkl~----lPlavq~hHA~vDG~Hi~~l~~~lQ~~~~~~~~ 216 (219)
T COG4845 162 NKIYGQPIFYAGRFYEEDGKLT----LPLAVQAHHANVDGFHIGQLFDQLQTLFSPPPC 216 (219)
T ss_pred CCCCCCEEEEECCEECCCCEEE----EEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 7422560476111204488098----767999511235432499999999997458987