HHsearch alignment for GI: 254780674 and conserved domain: TIGR01348
>TIGR01348 PDHac_trf_long pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; InterPro: IPR006256 This group of sequences are a subset of pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase specifically close by both phylogenetic and percent identity (UPGMA) trees. Members contain two or three copies of the lipoyl-binding domain. Escherichia coli AceF is included in this set while mitochondrial and some other bacterial forms are excluded. dihydrolipoyllysine-residue acetyltransferase E2 component of pyruvate dehydrogenase complex; GO: 0004742 dihydrolipoyllysine-residue acetyltransferase activity, 0006096 glycolysis, 0045254 pyruvate dehydrogenase complex.
Probab=99.83 E-value=1.4e-20 Score=157.36 Aligned_cols=81 Identities=30% Similarity=0.486 Sum_probs=76.8
Q ss_pred EEEECCCCCCCEEEEEEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEECCCEEEEEECCCC
Q ss_conf 47867887887217999999816897852798599995265312453687868999992488604035855999970754
Q gi|254780674|r 4 HTITMPSLSPTMTEGKLAKWIKQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEILVPAGTENIAVNSPILNILMDST 83 (423)
Q Consensus 4 ~~i~mP~lGe~m~egtI~~Wl~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~~~ 83 (423)
T Consensus 1 ~e~~vPDiG~n~~~g~v~evLV~~GD~V~~~Qslit~E~DKA~mEvPss~AG~ik~ikvkVG-Dt~~~G~~i~~l~~~~g 79 (655)
T TIGR01348 1 KEIKVPDIGDNIEEGEVIEVLVKVGDKVEAGQSLITLESDKASMEVPSSKAGIIKEIKVKVG-DTLKEGDVIALLEVSAG 79 (655)
T ss_pred CEECCCCCCCCCCCEEEEEEEECCCCEECCCCCEEEECCCEEEEEECCCCCCEEEEEEEEEC-CCCCCCCEEEEECCCCC
T ss_conf 90005751466775138999868897432687468870671278406899973788975446-65477878999716653
Q ss_pred CC
Q ss_conf 21
Q gi|254780674|r 84 EI 85 (423)
Q Consensus 84 ~~ 85 (423)
T Consensus 80 ~a 81 (655)
T TIGR01348 80 SA 81 (655)
T ss_pred CC
T ss_conf 21