HHsearch alignment for GI: 254780674 and conserved domain: cd06848
>cd06848 GCS_H Glycine cleavage H-protein. Glycine cleavage H-proteins are part of the glycine cleavage system (GCS) found in bacteria, archea and the mitochondria of eukaryotes. GCS is a multienzyme complex consisting of 4 different components (P-, H-, T- and L-proteins) which catalyzes the oxidative cleavage of glycine. The H-protein shuttles the methylamine group of glycine from the P-protein (glycine dehydrogenase) to the T-protein (aminomethyltransferase) via a lipoyl group, attached to a completely conserved lysine residue.
Probab=97.31 E-value=0.00038 Score=47.50 Aligned_cols=45 Identities=20% Similarity=0.271 Sum_probs=37.9
Q ss_pred EEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECC
Q ss_conf 9999981689785279859999526531245368786899999248
Q gi|254780674|r 19 KLAKWIKQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEILVPA 64 (423)
Q Consensus 19 tI~~Wl~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~v~e 64 (423)
T Consensus 32 ~~v~-lp~~g~~v~~g~~~~~iEs~k~~~~i~sPv~G~vv~~N~~l 76 (96)
T cd06848 32 VFVE-LPEVGTEVKKGDPFGSVESVKAASDLYSPVSGEVVEVNEAL 76 (96)
T ss_pred EEEE-CCCCCCCCCCCCEEEEEEECCEEEEEECCCCEEEEEEHHHH
T ss_conf 9999-17999701389859999963357887377166999837965