HHsearch results for GI: 254780674 and protein with PDBid: 2ii3_A
>2ii3_A Lipoamide acyltransferase component of branched- chain alpha-keto acid dehydrogenase...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=100.00 E-value=0 Score=514.99 Aligned_cols=229 Identities=29% Similarity=0.454 Sum_probs=218.0
Q ss_pred CCCCEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHC
Q ss_conf 56624655111221101110001232100000122233204678777566555432014665543222101110011000
Q gi|254780674|r 190 KDSYEVIPHDNIRKTIACRLQQSKQTIPHFYVSIDCNIDNLLSLREQMNRTLQFHREEISNKISVNDIILKAFALAMIQV 269 (423)
Q Consensus 190 ~~~~~~vp~s~irk~ia~~m~~S~~~iPh~~~~~evd~t~l~~~R~~l~~~~~~~~~~~~~kit~~~~l~kA~a~AL~~~ 269 (423)
....+++|+++|||+||++|++|| ++||||++.|||+|+|+++|+++|+... +.|.|+||++|++||+++||++|
T Consensus 28 ~~~~~~~pl~~~rk~ia~~m~~S~-~iPh~~~~~evD~t~l~~~R~~l~~~~~----~~g~klS~~~~likAva~aL~~~ 102 (262)
T 2ii3_A 28 IGKDRTEPVKGFHKAMVKTMSAAL-KIPHFGYCDEVDLTELVKLREELKPIAF----ARGIKLSFMPFFLKAASLGLLQF 102 (262)
T ss_dssp -CCCEEEECCGGGHHHHHHHHHGG-GSCEEEEEEEEECHHHHHHHHHHHHHHH----HTTCCCCSHHHHHHHHHHHHHHC
T ss_pred CCCCEEEECHHHHHHHHHHHHHHH-HCCEEEEEEEEEHHHHHHHHHHHHHHHH----HCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 898648886499999999999975-2780999999877999999998545555----13983437999999999999849
Q ss_pred CCCCCCCCC--CCCEECCCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCC
Q ss_conf 000001123--441012556654156514642020341455479899999876665431023346100377238985153
Q gi|254780674|r 270 PEANVSWTT--NAMIRHKHIDISVAVSIPGGIVTPIIRQADQKSILDISLEVKQLAQRAKQRKLKPEEYQGGTTSISNMG 347 (423)
Q Consensus 270 P~~Na~~~~--~~i~~~~~vnIgiAv~~~~GL~vPvIk~ad~~~l~~i~~~~~~l~~~ar~~~l~~~d~~ggtftiSNlG 347 (423)
|.+|++|++ +.+.++++||||+||++++||+||||||||++++.+|+++++++++|+|+|+|+++|++||||||||+|
T Consensus 103 P~~Na~~~~~~~~i~~~~~v~i~iav~~~~GL~vPVI~~a~~~sl~~ia~~~~~l~~~ar~~~L~~~d~~ggTftisnlG 182 (262)
T 2ii3_A 103 PILNASVDENCQNITYKASHNIGIAMDTEQGLIVPNVKNVQIRSIFEIATELNRLQKLGSAGQLSTNDLIGGTFTLSNIG 182 (262)
T ss_dssp GGGSEEECTTSCEEEECSSCCEEECEEETTEEECCEETTGGGCCHHHHHHHHHHHHHHHHHTCCCHHHHSCCCEEEECGG
T ss_pred CHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCC
T ss_conf 05122443236636676402434320157773444304654413288999999999998728977545688269952678
Q ss_pred CCCCCCCCCCCCCCCEEEEEECCCEEEEEEE-CCEEEEEEEEEEEEEEEECEEEHHHHHHHHHHHHHHHCCHHHHHC
Q ss_conf 2142210131158871689844631235877-893789548898985200114028899999999998719889719
Q gi|254780674|r 348 MLGINSFCAVINPPQSTILAIGAGEKKVVFQ-NEEIKVATIMNATLSADHRSVDGAIASKLLAKFKEYIENPVWMLM 423 (423)
Q Consensus 348 ~~g~~~~~pii~~pq~aILgvG~~~~~~~~~-~~~i~~~~~~~ltls~DHRvidGa~aa~Fl~~~~~~le~P~~ll~ 423 (423)
++|+.+|+|||||||+||||+|+++++|++. +|++.+|++|+||||||||+|||++||+||++|+++||||+.|||
T Consensus 183 ~~g~~~~tpii~ppq~aIlgvG~i~~~pvv~~dg~i~~r~~m~lsls~DHRviDGa~Aa~FL~~l~~~LE~P~~lll 259 (262)
T 2ii3_A 183 SIGGTYAKPVILPPEVAIGALGTIKALPRFNEKGEVCKAQIMNVSWSADHRIIDGATVSRFSNLWKSYLENPAFMLL 259 (262)
T ss_dssp GTCCSCEECCCCTTCCEEEEECCCEEEEEECTTSCEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHSTHHHHH
T ss_pred CCCCCEEECCCCCCCCEEEECCCEEEEEEECCCCCEEECCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCHHHHHC
T ss_conf 76541487123488521550465078879857993898348899988013340619999999999999769999860