Query         gi|254780674|ref|YP_003065087.1| pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 423
No_of_seqs    158 out of 6238
Neff          7.7 
Searched_HMMs 23785
Date          Tue May 31 18:33:11 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780674.hhm -d /home/congqian_1/database/pdb/pdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3dva_I Dihydrolipoyllysine-res 100.0       0       0  874.5   1.0  413    2-423     1-426 (428)
  2 1dpb_A Dihydrolipoyl-transacet 100.0       0       0  536.2  16.1  232  188-423    10-243 (243)
  3 1scz_A E2, dihydrolipoamide su 100.0       0       0  533.5  13.8  230  191-423     2-231 (233)
  4 3mae_A 2-oxoisovalerate dehydr 100.0       0       0  522.5  12.9  231  190-423    15-248 (256)
  5 2ii3_A Lipoamide acyltransfera 100.0       0       0  515.0  16.4  229  190-423    28-259 (262)
  6 3b8k_A PDCE2;, dihydrolipoylly 100.0       0       0  518.1  11.1  228  191-423    10-239 (239)
  7 3l60_A Branched-chain alpha-ke 100.0       0       0  497.1  15.2  224  192-423    13-240 (250)
  8 3cla_A Type III chloramphenico 100.0 7.2E-43       0  305.0  14.0  204  194-420     4-213 (213)
  9 1q23_A Chloramphenicol acetylt 100.0 4.8E-42       0  299.5  11.6  208  191-418     6-215 (219)
 10 1zy8_K Pyruvate dehydrogenase  100.0 5.5E-44       0  312.4   0.5  212    3-224     3-223 (229)
 11 2i9d_A Chloramphenicol acetylt 100.0 1.5E-40   7E-45  289.4  13.5  193  201-416    14-217 (217)
 12 1y8o_B Dihydrolipoyllysine-res  99.9 2.6E-25 1.1E-29  187.5  11.2   84    3-86     27-110 (128)
 13 2dne_A Dihydrolipoyllysine-res  99.9 2.3E-25 9.8E-30  187.9   8.8   85    1-85      5-89  (108)
 14 3crk_C Dihydrolipoyllysine-res  99.9   4E-23 1.7E-27  173.0  10.9   83    2-84      4-86  (87)
 15 2dnc_A Pyruvate dehydrogenase   99.9 3.4E-23 1.4E-27  173.4  10.0   86    1-86      5-90  (98)
 16 1ghj_A E2, E2, the dihydrolipo  99.9 5.7E-22 2.4E-26  165.2   7.9   79    3-82      1-79  (79)
 17 1k8m_A E2 component of branche  99.8 1.1E-20 4.5E-25  156.7   9.5   81    3-84      4-84  (93)
 18 1pmr_A Dihydrolipoyl succinylt  99.8 7.9E-22 3.3E-26  164.3  -0.9   77    3-80      2-78  (80)
 19 1qjo_A Dihydrolipoamide acetyl  99.8 1.7E-19 7.2E-24  148.6   8.2   79    2-83      1-79  (80)
 20 1gjx_A Pyruvate dehydrogenase;  99.8 1.8E-19 7.6E-24  148.5   4.1   80    2-83      1-80  (81)
 21 1iyu_A E2P, dihydrolipoamide a  99.7 1.1E-16 4.7E-21  129.8  10.5   76    4-83      2-77  (79)
 22 2k7v_A Dihydrolipoyllysine-res  99.6 1.9E-17 8.2E-22  134.9   1.4   76    2-84      1-76  (85)
 23 2ejm_A Methylcrotonoyl-COA car  99.6 4.1E-15 1.7E-19  119.4   7.8   66   17-83     22-87  (99)
 24 2dn8_A Acetyl-COA carboxylase   99.5 1.9E-14 7.9E-19  114.9   7.5   73    8-82     16-88  (100)
 25 1z6h_A Biotin/lipoyl attachmen  99.5 6.7E-14 2.8E-18  111.3   7.9   64   18-82      8-71  (72)
 26 2d5d_A Methylmalonyl-COA decar  99.5 9.3E-14 3.9E-18  110.3   8.3   60   18-78     14-73  (74)
 27 2kcc_A Acetyl-COA carboxylase   99.4 7.2E-14   3E-18  111.0   5.7   68   15-84     11-78  (84)
 28 1dcz_A Transcarboxylase 1.3S s  99.4 3.9E-13 1.6E-17  106.1   7.5   60   18-78     17-76  (77)
 29 2jku_A Propionyl-COA carboxyla  99.4 6.6E-14 2.8E-18  111.3   2.1   75    4-79     16-94  (94)
 30 2coo_A Lipoamide acyltransfera  99.2 1.3E-12 5.6E-17  102.5   2.2   52  114-165    10-61  (70)
 31 1w4i_A Pyruvate dehydrogenase   99.2 3.6E-12 1.5E-16   99.7   1.5   47  117-163     2-48  (62)
 32 3n6r_A Propionyl-COA carboxyla  99.1 1.7E-10 7.1E-15   88.5   8.3   14  141-154   331-344 (681)
 33 1zwv_A Lipoamide acyltransfera  99.1   8E-12 3.3E-16   97.4   1.0   47  116-162     4-50  (58)
 34 1w85_I Dihydrolipoyllysine-res  99.1 8.4E-12 3.5E-16   97.2   0.9   46  116-161     3-48  (49)
 35 1bdo_A Acetyl-COA carboxylase;  99.1 8.4E-11 3.5E-15   90.5   5.9   58   21-79     23-80  (80)
 36 2eq9_C Pyruvate dehydrogenase   99.0 2.4E-11   1E-15   94.1   1.1   40  120-159     1-40  (41)
 37 2f60_K Pyruvate dehydrogenase   99.0 2.5E-11   1E-15   94.1   0.5   48  116-163     6-53  (64)
 38 1bal_A Dihydrolipoamide succin  99.0 4.3E-11 1.8E-15   92.5   1.7   45  116-160     6-50  (51)
 39 2qf7_A Pyruvate carboxylase pr  99.0 3.2E-10 1.3E-14   86.7   5.2   16   26-41    236-251 (1165)
 40 2eq7_C 2-oxoglutarate dehydrog  99.0 3.9E-11 1.6E-15   92.8   0.4   39  121-159     1-39  (40)
 41 2eq8_C Pyruvate dehydrogenase   98.9 1.1E-10 4.5E-15   89.8   0.8   38  122-159     2-39  (40)
 42 3bg3_A Pyruvate carboxylase, m  98.8 8.1E-10 3.4E-14   83.9   2.8   20  307-326   366-385 (718)
 43 2k32_A A; NMR {Campylobacter j  98.0   7E-06 2.9E-10   57.6   5.9   62   17-79      9-100 (116)
 44 1hpc_A H protein of the glycin  97.3 0.00025 1.1E-08   47.2   5.1   42   19-61     39-80  (131)
 45 1onl_A Glycine cleavage system  97.3 0.00029 1.2E-08   46.8   5.3   42   19-61     39-80  (128)
 46 3mxu_A Glycine cleavage system  97.3 0.00031 1.3E-08   46.6   5.2   46   18-64     56-101 (143)
 47 3hgb_A Glycine cleavage system  97.3 0.00033 1.4E-08   46.4   5.2   42   19-61     62-103 (155)
 48 1zko_A Glycine cleavage system  97.2 0.00036 1.5E-08   46.2   5.2   44   19-63     48-91  (136)
 49 3klr_A Glycine cleavage system  97.2 0.00037 1.6E-08   46.1   5.2   45   19-64     35-79  (125)
 50 3a7l_A H-protein, glycine clea  97.2 0.00041 1.7E-08   45.8   5.2   47   17-64     38-84  (128)
 51 3lnn_A Membrane fusion protein  97.1  0.0011 4.8E-08   42.8   6.4   43   38-81     48-91  (359)
 52 3cdx_A Succinylglutamatedesucc  96.9  0.0044 1.8E-07   38.9   7.9   17  134-150   111-127 (354)
 53 3h9i_A Cation efflux system pr  96.9 0.00035 1.5E-08   46.2   2.2   55   25-80     99-155 (407)
 54 1k8m_A E2 component of branche  96.4  0.0029 1.2E-07   40.1   4.1   31   53-84     17-47  (93)
 55 1dcz_A Transcarboxylase 1.3S s  95.5   0.015 6.4E-07   35.3   4.7   40   45-85      7-46  (77)
 56 2kcc_A Acetyl-COA carboxylase   95.5   0.011 4.5E-07   36.3   3.9   42   41-85      2-43  (84)
 57 2dn8_A Acetyl-COA carboxylase   95.5   0.017 7.3E-07   34.9   4.8   38   47-85     18-55  (100)
 58 2ejm_A Methylcrotonoyl-COA car  95.2   0.018 7.4E-07   34.9   4.2   43   42-85     10-52  (99)
 59 2f1m_A Acriflavine resistance   95.2  0.0083 3.5E-07   37.1   2.5   36   45-81     21-56  (277)
 60 1bdo_A Acetyl-COA carboxylase;  95.1   0.015 6.5E-07   35.2   3.6   36   48-84      6-48  (80)
 61 2d5d_A Methylmalonyl-COA decar  95.0   0.024 9.9E-07   34.0   4.3   38   47-85      6-43  (74)
 62 1iyu_A E2P, dihydrolipoamide a  94.9   0.014 5.8E-07   35.6   3.0   32   53-85     11-42  (79)
 63 1z6h_A Biotin/lipoyl attachmen  94.8   0.029 1.2E-06   33.4   4.3   35   49-84      2-36  (72)
 64 1qjo_A Dihydrolipoamide acetyl  94.7   0.015 6.2E-07   35.4   2.6   32   53-85     13-44  (80)
 65 1vf7_A Multidrug resistance pr  94.6   0.014 5.8E-07   35.6   2.4   54   25-80     23-76  (369)
 66 3fpp_A Macrolide-specific effl  94.6   0.025   1E-06   33.9   3.5   54   26-81     12-65  (341)
 67 2k7v_A Dihydrolipoyllysine-res  94.4    0.01 4.3E-07   36.5   1.3   36   47-83      3-38  (85)
 68 1ghj_A E2, E2, the dihydrolipo  93.8   0.043 1.8E-06   32.3   3.5   35   51-86     12-46  (79)
 69 2jku_A Propionyl-COA carboxyla  93.6   0.034 1.4E-06   33.0   2.6   37   48-85     27-63  (94)
 70 3fpp_A Macrolide-specific effl  93.2     0.1 4.3E-06   29.7   4.6   31   16-46     38-68  (341)
 71 3hbl_A Pyruvate carboxylase; T  92.5    0.15 6.3E-06   28.6   4.7   44   48-92   1079-1122(1150)
 72 2k32_A A; NMR {Campylobacter j  92.5    0.13 5.5E-06   29.0   4.4   34   47-81      2-35  (116)
 73 2dnc_A Pyruvate dehydrogenase   92.4   0.068 2.8E-06   31.0   2.8   33   52-85     19-51  (98)
 74 2qf7_A Pyruvate carboxylase pr  92.2   0.056 2.4E-06   31.5   2.2   42   17-63    378-419 (1165)
 75 1y8o_B Dihydrolipoyllysine-res  92.2     0.1 4.3E-06   29.8   3.5   34   51-85     38-71  (128)
 76 2f1m_A Acriflavine resistance   92.1   0.078 3.3E-06   30.6   2.8   29   16-44     29-57  (277)
 77 3lnn_A Membrane fusion protein  92.1    0.22 9.3E-06   27.5   5.1   28   16-43     64-91  (359)
 78 2dne_A Dihydrolipoyllysine-res  91.8   0.086 3.6E-06   30.3   2.8   34   51-85     18-51  (108)
 79 1gjx_A Pyruvate dehydrogenase;  91.8   0.016 6.9E-07   35.1  -1.0   33   52-85     13-45  (81)
 80 3crk_C Dihydrolipoyllysine-res  91.8    0.12 5.1E-06   29.3   3.4   32   53-85     18-49  (87)
 81 2gpr_A Glucose-permease IIA co  91.5    0.19 8.1E-06   27.9   4.3   34   47-81      8-44  (154)
 82 1vf7_A Multidrug resistance pr  90.7    0.14   6E-06   28.8   2.9   28   16-43     50-77  (369)
 83 3dva_I Dihydrolipoyllysine-res  90.6   0.039 1.7E-06   32.5   0.0   28   16-43     52-79  (428)
 84 1zy8_K Pyruvate dehydrogenase   90.0   0.046   2E-06   32.1   0.0   35   50-85     13-47  (229)
 85 3d4r_A Domain of unknown funct  88.9    0.55 2.3E-05   24.9   4.8   41   18-58    109-150 (169)
 86 1ax3_A Iiaglc, glucose permeas  87.1    0.57 2.4E-05   24.8   4.0   36   45-82     11-50  (162)
 87 3paj_A Nicotinate-nucleotide p  86.4    0.42 1.8E-05   25.7   3.0   52  306-373   256-307 (320)
 88 1f3z_A EIIA-GLC, glucose-speci  84.0    0.56 2.3E-05   24.8   2.7   38   44-82     10-50  (161)
 89 2jbm_A Nicotinate-nucleotide p  83.6    0.57 2.4E-05   24.8   2.6   77  306-407   222-298 (299)
 90 1pmr_A Dihydrolipoyl succinylt  83.5    0.12 4.9E-06   29.4  -1.0   33   52-85     14-46  (80)
 91 1qpo_A Quinolinate acid phosph  83.4    0.92 3.9E-05   23.4   3.6   25   58-83     73-97  (284)
 92 1x1o_A Nicotinate-nucleotide p  82.7    0.77 3.2E-05   23.9   3.0   38  306-350   221-258 (286)
 93 2b7n_A Probable nicotinate-nuc  82.6       1 4.4E-05   23.0   3.6   25   58-83     60-84  (273)
 94 3gnn_A Nicotinate-nucleotide p  81.7    0.88 3.7E-05   23.5   3.0   25   58-83     88-112 (298)
 95 1qap_A Quinolinic acid phospho  81.0    0.99 4.1E-05   23.2   3.0   52  306-373   233-284 (296)
 96 2auk_A DNA-directed RNA polyme  80.8     1.6 6.9E-05   21.7   4.1   34   23-58     64-97  (190)
 97 1o4u_A Type II quinolic acid p  80.4     0.9 3.8E-05   23.4   2.7   25   58-83     73-97  (285)
 98 3l0g_A Nicotinate-nucleotide p  78.1     1.5 6.3E-05   22.0   3.2   54  306-375   232-285 (300)
 99 2bgh_A Vinorine synthase; VS,   76.3     2.4  0.0001   20.6   3.8   49  304-352   302-362 (421)
100 2rkv_A Trichothecene 3-O-acety  75.8     2.5 0.00011   20.4   3.8   19  305-323   320-338 (451)
101 1q9j_A PAPA5, polyketide synth  63.9     5.4 0.00023   18.2   3.4   99  250-352   233-353 (422)
102 3c2e_A Nicotinate-nucleotide p  62.3     3.8 0.00016   19.3   2.4   57  306-373   224-281 (294)
103 2e1v_A Acyl transferase; BAHD   60.2     7.6 0.00032   17.2   4.0   18  400-417   435-452 (454)
104 2hsi_A Putative peptidase M23;  56.9     5.1 0.00021   18.4   2.3   13  286-298   178-190 (282)
105 2gu1_A Zinc peptidase; alpha/b  55.0     5.8 0.00025   18.0   2.3   19  396-414   333-351 (361)
106 2i14_A Nicotinate-nucleotide p  48.4     7.7 0.00033   17.2   2.1   22   60-82     80-101 (395)
107 1l5a_A Amide synthase, VIBH; n  44.3      13 0.00057   15.6   8.6   34  388-421   374-411 (436)
108 3fot_A 15-O-acetyltransferase;  35.1      19 0.00078   14.6  10.1   33  386-418   485-517 (519)
109 1hcz_A Cytochrome F; electron   25.9      12 0.00049   16.0  -0.0   21  356-378   226-246 (252)
110 3nyy_A Putative glycyl-glycine  23.4      29  0.0012   13.3   1.9   18  258-275    83-100 (252)

No 1  
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=100.00  E-value=0  Score=874.48  Aligned_cols=413  Identities=28%  Similarity=0.469  Sum_probs=353.1

Q ss_pred             CCEEEECCCCCCCEEEEEEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEECCCEEEEEECC
Q ss_conf             63478678878872179999998168978527985999952653124536878689999924886040358559999707
Q gi|254780674|r    2 MIHTITMPSLSPTMTEGKLAKWIKQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEILVPAGTENIAVNSPILNILMD   81 (423)
Q Consensus         2 m~~~i~mP~lGe~m~egtI~~Wl~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~   81 (423)
                      |.++|+||+|||||+||+|++|||++||.|++||+||||||||++||||||++|+|.+|++++| |+++||++|+.|+.+
T Consensus         1 M~~ei~mP~lg~~~~eg~i~~W~~~~Gd~V~~gd~l~evETDKa~~ev~s~~~G~l~~i~~~~G-~~v~vG~~i~~i~~~   79 (428)
T 3dva_I            1 MAFEFKLPDIGEGIHEGEIVKWFVKPGDEVNEDDVLCEVQNDKAVVEIPSPVKGKVLEILVPEG-TVATVGQTLITLDAP   79 (428)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CCCEEECCCCCCCCEEEEEEEEEECCCCEECCCCEEEEEECCCEEEEECCCCCEEEEEEEECCC-CEEECCCEEEEEECC
T ss_conf             9932367999998406999999928999858999199998487607974689979999984899-998079989999557


Q ss_pred             CCCCCCCCCCCCCCCCC-----------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             54211111222100011-----------1112222233322222222222234322101111000001101234433222
Q gi|254780674|r   82 STEIPPSPPLSKENIVE-----------VREEHSHSSPVVVREKHSKNRPIASPLARRLAGEHGIDLSSLSGSGPHGRIV  150 (423)
Q Consensus        82 ~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~aSP~aRklA~e~giDl~~V~GTG~~GRIt  150 (423)
                      +++....+.........           .................+..++++||+||++|+|+||||++|.||||+|||+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~asP~aRklA~e~gIdl~~I~gtG~~GRIt  159 (428)
T 3dva_I           80 GYENMTFKGQEQEEAKKEEKTETVSKEEKVDAVAPNAPAAEAEAGPNRRVIAMPSVRKYAREKGVDIRLVQGTGKNGRVL  159 (428)
T ss_dssp             ------------------------------------------------CCCCCHHHHHHHHHTTCCGGGSCCCSTTSCCC
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHCCCCCCCCCCC
T ss_conf             76433221112111123222233222344444576655333456765655679167899988299977777889998435


Q ss_pred             CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCH
Q ss_conf             10024443200010001112211124444455546543456624655111221101110001232100000122233204
Q gi|254780674|r  151 KSDIETLISTKTNVKDYSTIQSFGLVDESIDANILNLFAKDSYEVIPHDNIRKTIACRLQQSKQTIPHFYVSIDCNIDNL  230 (423)
Q Consensus       151 k~DV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~s~irk~ia~~m~~S~~~iPh~~~~~evd~t~l  230 (423)
                      ++||++|+.+................    .............+++||++|||+||+||++||+++||+|++.++|+++|
T Consensus       160 k~DV~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ls~~Rk~iA~rm~~S~~tip~~t~~~evdvt~l  235 (428)
T 3dva_I          160 KEDIDAFLAGGAKPAPAAAEEKAAPA----AAKPATTEGEFPETREKMSGIRRAIAKAMVHSKHTAPHVTLMDEADVTKL  235 (428)
T ss_dssp             TTTTTTTSCC----------------------------------------------------------------------
T ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCEEECCHHHHHHHHHHHHCCCCCCEEEEEEEEEEHHH
T ss_conf             67788876501466543322235554----45665665568740433508889888766532412763667778970479


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC--CCCCEECCCCCCCEEEEECCCCCCEEEECCC
Q ss_conf             67877756655543201466554322210111001100000000112--3441012556654156514642020341455
Q gi|254780674|r  231 LSLREQMNRTLQFHREEISNKISVNDIILKAFALAMIQVPEANVSWT--TNAMIRHKHIDISVAVSIPGGIVTPIIRQAD  308 (423)
Q Consensus       231 ~~~R~~l~~~~~~~~~~~~~kit~~~~l~kA~a~AL~~~P~~Na~~~--~~~i~~~~~vnIgiAv~~~~GL~vPvIk~ad  308 (423)
                      +++|++++..+    ...+.|+||++||+||+++||++||.+|++|+  ++.+++|+++|||||||+++||+||||||||
T Consensus       236 ~~~r~~~~~~~----~~~~~klt~~~~likA~a~AL~~~P~~Nas~~~~~~~i~~~~~vnigiAv~~~~GLivPVIk~a~  311 (428)
T 3dva_I          236 VAHRKKFKAIA----AEKGIKLTFLPYVVKALVSALREYPVLNTSIDDETEEIIQKHYYNIGIAADTDRGLLVPVIKHAD  311 (428)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHH----HCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCCCEEEEEECCCCCCCCCEECCC
T ss_conf             99999999875----33466345599999999999874802160794588815541555358898459970343030556


Q ss_pred             CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCEEEEEEEE
Q ss_conf             47989999987666543102334610037723898515321422101311588716898446312358778937895488
Q gi|254780674|r  309 QKSILDISLEVKQLAQRAKQRKLKPEEYQGGTTSISNMGMLGINSFCAVINPPQSTILAIGAGEKKVVFQNEEIKVATIM  388 (423)
Q Consensus       309 ~~~l~~i~~~~~~l~~~ar~~~l~~~d~~ggtftiSNlG~~g~~~~~pii~~pq~aILgvG~~~~~~~~~~~~i~~~~~~  388 (423)
                      +|+|.+|++++++|++|||+|+|+++||+||||||||+|+||+++|||||||||+||||||+++++|++.+|+|.+|++|
T Consensus       312 ~~~l~~i~~~~~~l~~~ar~~~l~~~dl~ggTfTiSNlG~~G~~~~tpii~ppq~aIL~vG~i~~~pv~~~g~i~~~~~~  391 (428)
T 3dva_I          312 RKPIFALAQEINELAEKARDGKLTPGEMKGASCTITNIGSAGGQWFTPVINHPEVAILGIGRIAEKPIVRDGEIVAAPML  391 (428)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEECCCCCCCEEEECCCCCCCEEEEECCCCEEEEEEECCEEEEEEEE
T ss_conf             49999999999999999983999979908963799777656653577542689669997564446768889978898799


Q ss_pred             EEEEEEEECEEEHHHHHHHHHHHHHHHCCHHHHHC
Q ss_conf             98985200114028899999999998719889719
Q gi|254780674|r  389 NATLSADHRSVDGAIASKLLAKFKEYIENPVWMLM  423 (423)
Q Consensus       389 ~ltls~DHRvidGa~aa~Fl~~~~~~le~P~~ll~  423 (423)
                      +||||||||+|||++||+||++|+++||||++|||
T Consensus       392 ~lsls~DHRvidGa~aa~Fl~~l~~~le~P~~lll  426 (428)
T 3dva_I          392 ALSLSFDHRMIDGATAQKALNHIKRLLSDPELLLM  426 (428)
T ss_dssp             -----------------------------------
T ss_pred             EEEEEEECCCCCHHHHHHHHHHHHHHHHCHHHHHH
T ss_conf             99998516011639999999999998759898850


No 2  
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=100.00  E-value=0  Score=536.25  Aligned_cols=232  Identities=27%  Similarity=0.463  Sum_probs=221.8

Q ss_pred             CCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             34566246551112211011100012321000001222332046787775665554320146655432221011100110
Q gi|254780674|r  188 FAKDSYEVIPHDNIRKTIACRLQQSKQTIPHFYVSIDCNIDNLLSLREQMNRTLQFHREEISNKISVNDIILKAFALAMI  267 (423)
Q Consensus       188 ~~~~~~~~vp~s~irk~ia~~m~~S~~~iPh~~~~~evd~t~l~~~R~~l~~~~~~~~~~~~~kit~~~~l~kA~a~AL~  267 (423)
                      ...+..+++|+++|||+||++|++||+++||||++.|+|+++|+++|++++...    ++.+.|+|+++||+||++.||+
T Consensus        10 ~~~g~~e~v~ls~~rk~ia~~m~~S~~~iPh~~~~~evd~t~l~~~r~~l~~~~----~~~~~klt~~~~likA~a~aL~   85 (243)
T 1dpb_A           10 AKYGEIEEVPMTRLMQIGATNLHRSWLNVPHVTQFESADITELEAFRVAQKAVA----EKAGVKLTVLPLLLKACAYLLK   85 (243)
T ss_dssp             GGSSCCCCCCCCHHHHHHHHHHHHHHHHSCEEEEEEEEECHHHHHHHHHTHHHH----HHTTCCCCSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEECCHHHHHHHHHHHHHHHCCCEEEEEEEEECHHHHHHHHHHHHCC----CCCCCCCCHHHHHHHHHHHHHH
T ss_conf             358971798883999999999998720698799999997556899876542001----1358634389999999999986


Q ss_pred             HCCCCCCCCCCC--CCEECCCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEC
Q ss_conf             000000011234--410125566541565146420203414554798999998766654310233461003772389851
Q gi|254780674|r  268 QVPEANVSWTTN--AMIRHKHIDISVAVSIPGGIVTPIIRQADQKSILDISLEVKQLAQRAKQRKLKPEEYQGGTTSISN  345 (423)
Q Consensus       268 ~~P~~Na~~~~~--~i~~~~~vnIgiAv~~~~GL~vPvIk~ad~~~l~~i~~~~~~l~~~ar~~~l~~~d~~ggtftiSN  345 (423)
                      +||.+|++|+++  .+.+++++||||||++++||+||||||||++|+.+|++++++|++|||+|+|+++|++||||||||
T Consensus        86 ~~P~~Na~~~~~~~~~~~~~~inigiAv~~~~GL~vPVIk~a~~~sl~eia~~i~~l~~~ar~~~l~~~d~~ggTfTisN  165 (243)
T 1dpb_A           86 ELPDFNSSLAPSGQALIRKKYVHIGFAVDTPDGLLVPVIRNVDQKSLLQLAAEAAELAEKARSKKLGADAMQGACFTISS  165 (243)
T ss_dssp             HSGGGGEEECTTSSCEEECSSCCEEECEEETTEEECCEETTGGGSCHHHHHHHHHHHHHHHHTTCCCGGGGSCCSEEEEE
T ss_pred             HCHHHHCEECCCCCEEEEECCEEEEEECCCCCCCCCCEECCHHHCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEEC
T ss_conf             48463231758998999963445774023678840564756222799999999999999987389885442895697445


Q ss_pred             CCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCEEEEEEEEEEEEEEEECEEEHHHHHHHHHHHHHHHCCHHHHHC
Q ss_conf             532142210131158871689844631235877893789548898985200114028899999999998719889719
Q gi|254780674|r  346 MGMLGINSFCAVINPPQSTILAIGAGEKKVVFQNEEIKVATIMNATLSADHRSVDGAIASKLLAKFKEYIENPVWMLM  423 (423)
Q Consensus       346 lG~~g~~~~~pii~~pq~aILgvG~~~~~~~~~~~~i~~~~~~~ltls~DHRvidGa~aa~Fl~~~~~~le~P~~ll~  423 (423)
                      +|+||+.+|+|||||||+||||+|+++++|++++|++++|++|+||||||||+|||++||+||++|+++||||++|||
T Consensus       166 lG~~G~~~~tpiInppq~aILgvG~i~~~pv~~~g~i~~r~~m~ltls~DHRvidGa~aa~FL~~l~~~lE~P~~lll  243 (243)
T 1dpb_A          166 LGHIGGTAFTPIVNAPEVAILGVSKASMQPVWDGKAFQPRLMLPLSLSYDCRVINGAAAARFTKRLGDLLADIRAILL  243 (243)
T ss_dssp             CTTTCCSCCCCCCCTTSSEEEEECCCEEEEEECSSSEEEEEEEEEEEEEETTTSCHHHHHHHHHHHHHHHHCGGGGGC
T ss_pred             CCCCCCEEEEEEECCCCCEEEECCCCEEEEEEECCEEEEEEEEEEEEEEECCHHCHHHHHHHHHHHHHHHHCHHHHHC
T ss_conf             888763368841218862021126747888998999899889999998164040589999999999999869997759


No 3  
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 layers); 2.20A {Escherichia coli K12} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=100.00  E-value=0  Score=533.53  Aligned_cols=230  Identities=30%  Similarity=0.503  Sum_probs=223.2

Q ss_pred             CCCEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf             66246551112211011100012321000001222332046787775665554320146655432221011100110000
Q gi|254780674|r  191 DSYEVIPHDNIRKTIACRLQQSKQTIPHFYVSIDCNIDNLLSLREQMNRTLQFHREEISNKISVNDIILKAFALAMIQVP  270 (423)
Q Consensus       191 ~~~~~vp~s~irk~ia~~m~~S~~~iPh~~~~~evd~t~l~~~R~~l~~~~~~~~~~~~~kit~~~~l~kA~a~AL~~~P  270 (423)
                      .+++++|+++|||+||++|++||+++||||++.|||+++|+++|+++++.+.   ++.|.|+||++|++||+++||++||
T Consensus         2 ~~ee~ipls~~Rk~ia~~m~~S~~~iP~~~~~~evd~t~l~~~r~~~~~~~~---~~~g~~lt~~~~likA~a~aL~~~P   78 (233)
T 1scz_A            2 RSEKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQYGEAFE---KRHGIRLGFMSFYVKAVVEALKRYP   78 (233)
T ss_dssp             CSCCCCCCCHHHHHHHHHHHHHHTTSCEEEEEEEEECHHHHHHHHHHHHHHH---HHHSSCCCSHHHHHHHHHHHHHHCT
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEHHHHHHHHHHHHHHHH---HHCCCCCCHHHHHHHHHHHHHHHCH
T ss_conf             9874446829999999999987255986999999975999999999887666---5238741489999999999999580


Q ss_pred             CCCCCCCCCCCEECCCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf             00001123441012556654156514642020341455479899999876665431023346100377238985153214
Q gi|254780674|r  271 EANVSWTTNAMIRHKHIDISVAVSIPGGIVTPIIRQADQKSILDISLEVKQLAQRAKQRKLKPEEYQGGTTSISNMGMLG  350 (423)
Q Consensus       271 ~~Na~~~~~~i~~~~~vnIgiAv~~~~GL~vPvIk~ad~~~l~~i~~~~~~l~~~ar~~~l~~~d~~ggtftiSNlG~~g  350 (423)
                      .+|++|+++++.+++++|||+||++++||+||||||||++++.+|++++++|++|||+|+|+++||+||||||||+|+||
T Consensus        79 ~~Na~~~~~~i~~~~~vnIgvAV~~~~GL~vPVI~~a~~~sl~eia~~i~~l~~kar~gkL~~~d~~ggTfTISNlG~~G  158 (233)
T 1scz_A           79 EVNASIDGDDVVYHNYFDVSMAVSTPRGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFG  158 (233)
T ss_dssp             TTTCEEETTEEECCSSCCEEECEEETTEEECCEETTGGGCCHHHHHHHHHHHHHHTTTTCCCHHHHSCCSEEEEEGGGGT
T ss_pred             HHCCEEECCEEEEECCCCCCCEEECCCCEECCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEECCCCCC
T ss_conf             52108938905994443443016617846512252512078999999999999999749999799568718997687667


Q ss_pred             CCCCCCCCCCCCEEEEEECCCEEEEEEECCEEEEEEEEEEEEEEEECEEEHHHHHHHHHHHHHHHCCHHHHHC
Q ss_conf             2210131158871689844631235877893789548898985200114028899999999998719889719
Q gi|254780674|r  351 INSFCAVINPPQSTILAIGAGEKKVVFQNEEIKVATIMNATLSADHRSVDGAIASKLLAKFKEYIENPVWMLM  423 (423)
Q Consensus       351 ~~~~~pii~~pq~aILgvG~~~~~~~~~~~~i~~~~~~~ltls~DHRvidGa~aa~Fl~~~~~~le~P~~ll~  423 (423)
                      +.+|+|||||||+||||+|+++++|++.+|++++|++|+||||||||+|||++||+||++|+++||||+.|||
T Consensus       159 ~~~~tpii~ppq~aIlgvG~i~~~pv~~~g~i~ir~~~~lsls~DHRviDGa~aa~Fl~~l~~~LE~P~~lll  231 (233)
T 1scz_A          159 SLMSTPIINPPQSAILGMHAIKDRPMAVNGQVEILPMMYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLLL  231 (233)
T ss_dssp             CCCCCCCCCTTCSEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHCTTHHHH
T ss_pred             CCCCCCCCCCCCCEEEEECCCEEECCCCCCEEEEEEEEEEEEEEECCHHCHHHHHHHHHHHHHHHHCHHHHHH
T ss_conf             5400366579954598504436454565994899999999988032340539999999999999859898971


No 4  
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=100.00  E-value=0  Score=522.53  Aligned_cols=231  Identities=31%  Similarity=0.507  Sum_probs=222.4

Q ss_pred             CCCCEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHC
Q ss_conf             56624655111221101110001232100000122233204678777566555432014665543222101110011000
Q gi|254780674|r  190 KDSYEVIPHDNIRKTIACRLQQSKQTIPHFYVSIDCNIDNLLSLREQMNRTLQFHREEISNKISVNDIILKAFALAMIQV  269 (423)
Q Consensus       190 ~~~~~~vp~s~irk~ia~~m~~S~~~iPh~~~~~evd~t~l~~~R~~l~~~~~~~~~~~~~kit~~~~l~kA~a~AL~~~  269 (423)
                      ..+++.+|+++|||+||++|++||+++||||++.|||+|+|+++|+++|+.+.   ++.+.++|+++|++||+++||++|
T Consensus        15 ~~~~~~vpls~~rk~ia~~m~~S~~~iP~~~~~~evd~t~l~~~r~~l~~~~~---~~~g~~~t~~~~~ikAva~aL~~~   91 (256)
T 3mae_A           15 AAGDKEIPINGVRKAIAKHMSVSKQEIPHAWMMVEVDATGLVRYRNAVKDSFK---KEEGYSLTYFAFFIKAVAQALKEF   91 (256)
T ss_dssp             CCSCEEEECCHHHHHHHHHHHHHHHHSCEEEEEEEEECHHHHHHHHHHHHHHH---HHHSSCCCHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEECCHHHHHHHHHHHHHHCCCCEEEEEEEEEHHHHHHHHHHHHHHHH---HHCCCCCCHHHHHHHHHHHHHHCC
T ss_conf             89984853719999999999997504986999999834769999999988766---541876439999999987776538


Q ss_pred             CCCCCCCCCCCCEECCCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCC
Q ss_conf             00000112344101255665415651464202034145547989999987666543102334610037723898515321
Q gi|254780674|r  270 PEANVSWTTNAMIRHKHIDISVAVSIPGGIVTPIIRQADQKSILDISLEVKQLAQRAKQRKLKPEEYQGGTTSISNMGML  349 (423)
Q Consensus       270 P~~Na~~~~~~i~~~~~vnIgiAv~~~~GL~vPvIk~ad~~~l~~i~~~~~~l~~~ar~~~l~~~d~~ggtftiSNlG~~  349 (423)
                      |.+|++|+++.+.+++++|||+||++++||+||||||||+++|.+|++++++|++|||+|+|+++|++||||||||+|+|
T Consensus        92 P~~Na~~~~~~i~~~~~vnigiAV~~~~GL~vPVI~~a~~~sl~eIa~~i~~l~~kar~~~l~~~d~~ggTfTISNlG~~  171 (256)
T 3mae_A           92 PQLNSTWAGDKIIEHANINISIAIAAGDLLYVPVIKNADEKSIKGIAREISELAGKARNGKLSQADMEGGTFTVNSTGSF  171 (256)
T ss_dssp             TTTSEEEETTEEEECSSCCEEECCCCTTSCCCCEETTGGGSCHHHHHHHHHHHHHHHHTTCCCHHHHSCCSEEEECGGGG
T ss_pred             CHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCEEEEECCCCC
T ss_conf             51101555542110156874689862896486113676659999999999999999984999968967866886437875


Q ss_pred             CCCCCCCCCCCCCEEEEEECCCEEEEEEECCEEEEEEEEEEEEEEEECEEEHHHHHHHHHHHHHHHCCHHH---HHC
Q ss_conf             42210131158871689844631235877893789548898985200114028899999999998719889---719
Q gi|254780674|r  350 GINSFCAVINPPQSTILAIGAGEKKVVFQNEEIKVATIMNATLSADHRSVDGAIASKLLAKFKEYIENPVW---MLM  423 (423)
Q Consensus       350 g~~~~~pii~~pq~aILgvG~~~~~~~~~~~~i~~~~~~~ltls~DHRvidGa~aa~Fl~~~~~~le~P~~---ll~  423 (423)
                      |+.+|+|||||||+||||+|+++++|++.+|++++|++|+||||||||+|||++||+||++||++||||++   +||
T Consensus       172 g~~~~tpii~ppq~aIlgvG~i~~~pvv~dg~i~~r~~m~lslt~DHRviDGa~Aa~FL~~lk~~LE~p~~~~~~~~  248 (256)
T 3mae_A          172 GSVQSMGIINHPQAAILQVESIVKRPVIIDDMIAVRDMVNLCLSIDHRILDGLLAGKFLQAIKANVEKISKENTALY  248 (256)
T ss_dssp             TCSEEECCCCTTSSEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHTCCTTTCCCC
T ss_pred             CCEEEEEECCCCCCEEECCCCEEEEEEEECCEEEEEEEEEEEEEEECCHHCCHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf             53246653369972164244418888999999899768999898562040739999999999999659986764000


No 5  
>2ii3_A Lipoamide acyltransferase component of branched- chain alpha-keto acid dehydrogenase...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=100.00  E-value=0  Score=514.99  Aligned_cols=229  Identities=29%  Similarity=0.454  Sum_probs=218.0

Q ss_pred             CCCCEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHC
Q ss_conf             56624655111221101110001232100000122233204678777566555432014665543222101110011000
Q gi|254780674|r  190 KDSYEVIPHDNIRKTIACRLQQSKQTIPHFYVSIDCNIDNLLSLREQMNRTLQFHREEISNKISVNDIILKAFALAMIQV  269 (423)
Q Consensus       190 ~~~~~~vp~s~irk~ia~~m~~S~~~iPh~~~~~evd~t~l~~~R~~l~~~~~~~~~~~~~kit~~~~l~kA~a~AL~~~  269 (423)
                      ....+++|+++|||+||++|++|| ++||||++.|||+|+|+++|+++|+...    +.|.|+||++|++||+++||++|
T Consensus        28 ~~~~~~~pl~~~rk~ia~~m~~S~-~iPh~~~~~evD~t~l~~~R~~l~~~~~----~~g~klS~~~~likAva~aL~~~  102 (262)
T 2ii3_A           28 IGKDRTEPVKGFHKAMVKTMSAAL-KIPHFGYCDEVDLTELVKLREELKPIAF----ARGIKLSFMPFFLKAASLGLLQF  102 (262)
T ss_dssp             -CCCEEEECCGGGHHHHHHHHHGG-GSCEEEEEEEEECHHHHHHHHHHHHHHH----HTTCCCCSHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEECHHHHHHHHHHHHHHH-HCCEEEEEEEEEHHHHHHHHHHHHHHHH----HCCCCCCHHHHHHHHHHHHHHHC
T ss_conf             898648886499999999999975-2780999999877999999998545555----13983437999999999999849


Q ss_pred             CCCCCCCCC--CCCEECCCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCC
Q ss_conf             000001123--441012556654156514642020341455479899999876665431023346100377238985153
Q gi|254780674|r  270 PEANVSWTT--NAMIRHKHIDISVAVSIPGGIVTPIIRQADQKSILDISLEVKQLAQRAKQRKLKPEEYQGGTTSISNMG  347 (423)
Q Consensus       270 P~~Na~~~~--~~i~~~~~vnIgiAv~~~~GL~vPvIk~ad~~~l~~i~~~~~~l~~~ar~~~l~~~d~~ggtftiSNlG  347 (423)
                      |.+|++|++  +.+.++++||||+||++++||+||||||||++++.+|+++++++++|+|+|+|+++|++||||||||+|
T Consensus       103 P~~Na~~~~~~~~i~~~~~v~i~iav~~~~GL~vPVI~~a~~~sl~~ia~~~~~l~~~ar~~~L~~~d~~ggTftisnlG  182 (262)
T 2ii3_A          103 PILNASVDENCQNITYKASHNIGIAMDTEQGLIVPNVKNVQIRSIFEIATELNRLQKLGSAGQLSTNDLIGGTFTLSNIG  182 (262)
T ss_dssp             GGGSEEECTTSCEEEECSSCCEEECEEETTEEECCEETTGGGCCHHHHHHHHHHHHHHHHHTCCCHHHHSCCCEEEECGG
T ss_pred             CHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCC
T ss_conf             05122443236636676402434320157773444304654413288999999999998728977545688269952678


Q ss_pred             CCCCCCCCCCCCCCCEEEEEECCCEEEEEEE-CCEEEEEEEEEEEEEEEECEEEHHHHHHHHHHHHHHHCCHHHHHC
Q ss_conf             2142210131158871689844631235877-893789548898985200114028899999999998719889719
Q gi|254780674|r  348 MLGINSFCAVINPPQSTILAIGAGEKKVVFQ-NEEIKVATIMNATLSADHRSVDGAIASKLLAKFKEYIENPVWMLM  423 (423)
Q Consensus       348 ~~g~~~~~pii~~pq~aILgvG~~~~~~~~~-~~~i~~~~~~~ltls~DHRvidGa~aa~Fl~~~~~~le~P~~ll~  423 (423)
                      ++|+.+|+|||||||+||||+|+++++|++. +|++.+|++|+||||||||+|||++||+||++|+++||||+.|||
T Consensus       183 ~~g~~~~tpii~ppq~aIlgvG~i~~~pvv~~dg~i~~r~~m~lsls~DHRviDGa~Aa~FL~~l~~~LE~P~~lll  259 (262)
T 2ii3_A          183 SIGGTYAKPVILPPEVAIGALGTIKALPRFNEKGEVCKAQIMNVSWSADHRIIDGATVSRFSNLWKSYLENPAFMLL  259 (262)
T ss_dssp             GTCCSCEECCCCTTCCEEEEECCCEEEEEECTTSCEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHSTHHHHH
T ss_pred             CCCCCEEECCCCCCCCEEEECCCEEEEEEECCCCCEEECCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCHHHHHC
T ss_conf             76541487123488521550465078879857993898348899988013340619999999999999769999860


No 6  
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=100.00  E-value=0  Score=518.14  Aligned_cols=228  Identities=51%  Similarity=0.824  Sum_probs=219.1

Q ss_pred             CCCEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf             66246551112211011100012321000001222332046787775665554320146655432221011100110000
Q gi|254780674|r  191 DSYEVIPHDNIRKTIACRLQQSKQTIPHFYVSIDCNIDNLLSLREQMNRTLQFHREEISNKISVNDIILKAFALAMIQVP  270 (423)
Q Consensus       191 ~~~~~vp~s~irk~ia~~m~~S~~~iPh~~~~~evd~t~l~~~R~~l~~~~~~~~~~~~~kit~~~~l~kA~a~AL~~~P  270 (423)
                      +.++.+|+++|||+||++|++||+++||||++.|||+|+|+++|+++|+.+     +.+.|+|+++|++||+++||++||
T Consensus        10 ~~~~~vpls~~r~~ia~~m~~S~~~iP~~~~~~evd~t~l~~~r~~~~~~~-----~~~~k~s~~~~~ikA~~~al~~~P   84 (239)
T 3b8k_A           10 GVFTDIPISNIRRVIAQRLMQSKQTIPHYYLSIDVNMGEVLLVRKELNKIL-----EGRSKISVNDFIIKASALACLKVP   84 (239)
T ss_dssp             CSCCCSSSCCSHHHHHHHHHHHHHHCCCCCEEEEECCTTHHHHHHHTHHHH-----TTSSCCCHHHHHHHHHHHHHHHCC
T ss_pred             CCCEEEECCHHHHHHHHHHHHHHHCCCEEEEEEEEEHHHHHHHHHHHHHHH-----HCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             983786772999999999999884398799999984289999999977764-----125545601789999999999988


Q ss_pred             CCCCCCCCCCCEECCCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf             00001123441012556654156514642020341455479899999876665431023346100377238985153214
Q gi|254780674|r  271 EANVSWTTNAMIRHKHIDISVAVSIPGGIVTPIIRQADQKSILDISLEVKQLAQRAKQRKLKPEEYQGGTTSISNMGMLG  350 (423)
Q Consensus       271 ~~Na~~~~~~i~~~~~vnIgiAv~~~~GL~vPvIk~ad~~~l~~i~~~~~~l~~~ar~~~l~~~d~~ggtftiSNlG~~g  350 (423)
                      .+|++|+++.+.+++++||||||++++||+|||||+||++++.+|+++++++.+|+|+|+|+++|++||||||||+|+||
T Consensus        85 ~~Na~~~~~~i~~~~~vnigiAV~~~~gL~vPvI~~a~~~sl~~ia~~~~~l~~~ar~g~L~~~dl~ggTfTISNlG~~G  164 (239)
T 3b8k_A           85 EANSSWMDTVIRQNHVVDVSVAVSTPAGLITPIVFNAHIKGVETIANDVVSLATKAREGKLQPHEFQGGTFTISNLGMFG  164 (239)
T ss_dssp             CSCTTSCCCSSSCSCCCCEEECEECSSCEECCEECCSSCCCHHHHHHHHHHHHHHHHTTCCCGGGGCCCSEEEEECCSSC
T ss_pred             HHHHCCCCCEEEEECCCCEEEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEECCCCCC
T ss_conf             76310356469993132331258738985310698766089899999999999999839999788079528876267754


Q ss_pred             CCCCCCCCCCCCEEEEEECCCEEEEEEECC--EEEEEEEEEEEEEEEECEEEHHHHHHHHHHHHHHHCCHHHHHC
Q ss_conf             221013115887168984463123587789--3789548898985200114028899999999998719889719
Q gi|254780674|r  351 INSFCAVINPPQSTILAIGAGEKKVVFQNE--EIKVATIMNATLSADHRSVDGAIASKLLAKFKEYIENPVWMLM  423 (423)
Q Consensus       351 ~~~~~pii~~pq~aILgvG~~~~~~~~~~~--~i~~~~~~~ltls~DHRvidGa~aa~Fl~~~~~~le~P~~ll~  423 (423)
                      +.+|+|||||||+||||+|+++++|++.++  .+++|++|+||||||||+|||++||+||++|+++||||++|||
T Consensus       165 ~~~~tpii~ppq~ail~vG~i~~~pv~~~~~~~i~~r~~m~lslt~DHRviDGa~aa~FL~~l~~~LE~P~~lll  239 (239)
T 3b8k_A          165 IKNFSAIINPPQACILAIGASEDKLVPADNEKGFDVASMMSVTLSCDHRVVDGAVGAQWLAEFRKYLEKPITMLL  239 (239)
T ss_dssp             CSSCCCCCCTTSCCCCEECCCCCSCCCCCSSSSCCCCCCEEEEECCCCCSSCHHHHHHHHHHHHHHHHCTHHHHC
T ss_pred             EEEEECCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHC
T ss_conf             235643667995137215674678899879986799878797688321150689999999999999709887759


No 7  
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis}
Probab=100.00  E-value=0  Score=497.12  Aligned_cols=224  Identities=25%  Similarity=0.450  Sum_probs=215.8

Q ss_pred             CCEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf             62465511122110111000123210000012223320467877756655543201466554322210111001100000
Q gi|254780674|r  192 SYEVIPHDNIRKTIACRLQQSKQTIPHFYVSIDCNIDNLLSLREQMNRTLQFHREEISNKISVNDIILKAFALAMIQVPE  271 (423)
Q Consensus       192 ~~~~vp~s~irk~ia~~m~~S~~~iPh~~~~~evd~t~l~~~R~~l~~~~~~~~~~~~~kit~~~~l~kA~a~AL~~~P~  271 (423)
                      +.+.+|+++|||+||++|++||++|||||++.|+|+|+|+++|+++++        .+.|+|+++|++||+++||++||.
T Consensus        13 ~~~~~pl~~~r~~ia~~m~~S~~~iPh~~~~~evd~t~l~~~r~~~~~--------~~~k~s~~~~~ikA~~~aL~~~P~   84 (250)
T 3l60_A           13 GPDVRPVHGVHARMAEKMTLSHKEIPTAKASVEVICAELLRLRDRFVS--------AAPEITPFALTLRLLVIALKHNVI   84 (250)
T ss_dssp             -CCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEEECHHHHHHHHHHTT--------TCTTCCHHHHHHHHHHHHHHHCGG
T ss_pred             CCCEEECHHHHHHHHHHHHHHHHHCCEEEEEEEEEHHHHHHHHHHHHH--------HCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf             974307659999999999998861997999999876999999898765--------255553115379999999984842


Q ss_pred             CCCCCCC----CCCEECCCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCC
Q ss_conf             0001123----441012556654156514642020341455479899999876665431023346100377238985153
Q gi|254780674|r  272 ANVSWTT----NAMIRHKHIDISVAVSIPGGIVTPIIRQADQKSILDISLEVKQLAQRAKQRKLKPEEYQGGTTSISNMG  347 (423)
Q Consensus       272 ~Na~~~~----~~i~~~~~vnIgiAv~~~~GL~vPvIk~ad~~~l~~i~~~~~~l~~~ar~~~l~~~d~~ggtftiSNlG  347 (423)
                      +|++|.+    +.+.+++.+||||||++++||+|||||+||+++|.+|++++++|.++||+|+|+++|++||||||||+|
T Consensus        85 ~N~~~~~~~~~~~i~~~~~vnIgvAv~~~~GL~vPvI~~a~~~sl~eia~~~~~l~~~ar~~~L~~~d~~ggtftisnlG  164 (250)
T 3l60_A           85 LNSTWVDSGEGPQVHVHRGVHLGFGAATERGLLVPVVTDAQDKNTRELASRVAELITGAREGTLTPAELRGSTFTVSNFG  164 (250)
T ss_dssp             GSEEEECTTTSCEEEECSSCCEEECEEETTEEECCEETTGGGCCHHHHHHHHHHHHHHHHHTCCCGGGGSCCSEEEECGG
T ss_pred             CCCCEEECCCCCEEEEECCEEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCC
T ss_conf             37726523688669997544320444678966983581775489999999889999998728978201488339998788


Q ss_pred             CCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCEEEEEEEEEEEEEEEECEEEHHHHHHHHHHHHHHHCCHHHHHC
Q ss_conf             2142210131158871689844631235877893789548898985200114028899999999998719889719
Q gi|254780674|r  348 MLGINSFCAVINPPQSTILAIGAGEKKVVFQNEEIKVATIMNATLSADHRSVDGAIASKLLAKFKEYIENPVWMLM  423 (423)
Q Consensus       348 ~~g~~~~~pii~~pq~aILgvG~~~~~~~~~~~~i~~~~~~~ltls~DHRvidGa~aa~Fl~~~~~~le~P~~ll~  423 (423)
                      +||+.+|+|||||||+||||+|+++++|++.+|++++|++|+||||||||+|||++|++||++|+++||||++|||
T Consensus       165 ~~g~~~~tpii~ppq~aIl~vG~i~~~pv~~~g~i~~r~~m~lslt~DHRviDGa~aa~FL~~lk~~LE~P~~lLl  240 (250)
T 3l60_A          165 ALGVDDGVPVINHPEAAILGLGAIKPRPVVVGGEVVARPTMTLTCVFDHRVVDGAQVAQFMCELRDLIESPETALL  240 (250)
T ss_dssp             GGTCSSCCCCCCTTCSEEEEECCCEEEEEEETTEEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHSHHHHTT
T ss_pred             CCCCCEEEECCCCCCCEEEECCCCCEEEEEECCEEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCHHHHHH
T ss_conf             8773417841469963387415652477888998899789999888525221629999999999999719999997


No 8  
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=100.00  E-value=7.2e-43  Score=304.98  Aligned_cols=204  Identities=13%  Similarity=0.169  Sum_probs=172.4

Q ss_pred             EEEEECC-CCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCC
Q ss_conf             4655111-221101110001232100000122233204678777566555432014665543222101110011000000
Q gi|254780674|r  194 EVIPHDN-IRKTIACRLQQSKQTIPHFYVSIDCNIDNLLSLREQMNRTLQFHREEISNKISVNDIILKAFALAMIQVPEA  272 (423)
Q Consensus       194 ~~vp~s~-irk~ia~~m~~S~~~iPh~~~~~evd~t~l~~~R~~l~~~~~~~~~~~~~kit~~~~l~kA~a~AL~~~P~~  272 (423)
                      +.+.++. .||...+..+.  .+.|||+++.++|+|+|.+++++             .++||+++++||+++||.+||.|
T Consensus         4 ~~id~~~w~Rk~~f~~f~~--~~~P~~~it~~vDvt~l~~~~K~-------------~~~sf~~~~l~a~~~Al~~~p~~   68 (213)
T 3cla_A            4 TKFDVKNWVRREHFEFYRH--RLPCGFSLTSKIDITTLKKSLDD-------------SAYKFYPVMIYLIAQAVNQFDEL   68 (213)
T ss_dssp             EECCCTTCTTHHHHHHHHH--TSCCEEEEEEEEECHHHHHHHHT-------------SSCCHHHHHHHHHHHHHTTCGGG
T ss_pred             EEECCCCCCCHHHHHHHHC--CCCCEEEEEEEEEHHHHHHHHHH-------------CCCCCHHHHHHHHHHHHHHCHHH
T ss_conf             5757566844899999747--99978999989869999999998-------------09985899999999999969586


Q ss_pred             CCCCCCCCCEECCCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCC-CCCCCCC-CCEEEEECCCCCC
Q ss_conf             0011234410125566541565146420203414554798999998766654310233-4610037-7238985153214
Q gi|254780674|r  273 NVSWTTNAMIRHKHIDISVAVSIPGGIVTPIIRQADQKSILDISLEVKQLAQRAKQRK-LKPEEYQ-GGTTSISNMGMLG  350 (423)
Q Consensus       273 Na~~~~~~i~~~~~vnIgiAv~~~~GL~vPvIk~ad~~~l~~i~~~~~~l~~~ar~~~-l~~~d~~-ggtftiSNlG~~g  350 (423)
                      |++|+++++++++++|+|+||++++||++|+|++++++++.++++++++++++||+++ +.+++.. ++||||||+|.++
T Consensus        69 n~~~~~~~i~~~~~i~igiav~~~~gl~vp~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~t~~iS~lg~~~  148 (213)
T 3cla_A           69 RMAIKDDELIVWDSVDPQFTVFHQETETFSALSCPYSSDIDQFMVNYLSVMERYKSDTKLFPQGVTPENHLNISALPWVN  148 (213)
T ss_dssp             SEEEETTEEEEESCCEEEEEEEETTTTEEEEEECCCCSSHHHHHHHHHHHHHHHTTCCSSSTTSSCCSSEEEEEEETTCC
T ss_pred             HEEEECCEEEECCCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCC
T ss_conf             46985998888377475999984898288469348879999999999999999973678886545789889977776756


Q ss_pred             CCCCCCCCCCCC---EEEEEECCCEEEEEEECCEEEEEEEEEEEEEEEECEEEHHHHHHHHHHHHHHHCCHHH
Q ss_conf             221013115887---1689844631235877893789548898985200114028899999999998719889
Q gi|254780674|r  351 INSFCAVINPPQ---STILAIGAGEKKVVFQNEEIKVATIMNATLSADHRSVDGAIASKLLAKFKEYIENPVW  420 (423)
Q Consensus       351 ~~~~~pii~~pq---~aILgvG~~~~~~~~~~~~i~~~~~~~ltls~DHRvidGa~aa~Fl~~~~~~le~P~~  420 (423)
                      .+.+++.++.++   ..|++.|++..    .++    |.+|++||+||||++||+++|+|++.|+++||||.+
T Consensus       149 ft~i~~~~~~~~~~~~Pii~~Gk~~~----~~~----r~~m~lsl~~dHrvvDG~~~a~Fl~~lk~~le~p~k  213 (213)
T 3cla_A          149 FDSFNLNVANFTDYFAPIITMAKYQQ----EGD----RLLLPLSVQVHHAVCDGFHVARFINRLQELCNSKLK  213 (213)
T ss_dssp             CSCCCCCCSCCTTCCSCEEEEECCEE----ETT----EEEEEEEEEEETTTCCHHHHHHHHHHHHHHHTSCCC
T ss_pred             CCCCCCCCCCCCCCEECEEECCCCEE----ECC----EEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCC
T ss_conf             44403577777323427794367488----889----899999999623011729999999999999758379


No 9  
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A*
Probab=100.00  E-value=4.8e-42  Score=299.48  Aligned_cols=208  Identities=13%  Similarity=0.114  Sum_probs=182.9

Q ss_pred             CCCEEEEECC-CCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHC
Q ss_conf             6624655111-221101110001232100000122233204678777566555432014665543222101110011000
Q gi|254780674|r  191 DSYEVIPHDN-IRKTIACRLQQSKQTIPHFYVSIDCNIDNLLSLREQMNRTLQFHREEISNKISVNDIILKAFALAMIQV  269 (423)
Q Consensus       191 ~~~~~vp~s~-irk~ia~~m~~S~~~iPh~~~~~evd~t~l~~~R~~l~~~~~~~~~~~~~kit~~~~l~kA~a~AL~~~  269 (423)
                      .+++.+.++. .||...+....  .+.|||+++.++|+|++++++++             .++||+++++||+++||.+|
T Consensus         6 ~~~~~Id~~~w~R~~~f~~f~~--~~~P~~~~t~~iDvt~l~~~~k~-------------~~~sf~~~~~~ai~~Al~~~   70 (219)
T 1q23_A            6 TGYTTVDISQWHRKEHFEAFQS--VAQCTYNQTVQLDITAFLKTVKK-------------NKHKFYPAFIHILARLMNAH   70 (219)
T ss_dssp             CCEEECCGGGCTTHHHHHHHTT--TTCEEEEEEEEEECHHHHHHHHH-------------TTCCHHHHHHHHHHHHHTTC
T ss_pred             CCCEEECHHHCCHHHHHHHHHC--CCCCEEEEEEEEEHHHHHHHHHH-------------CCCCCHHHHHHHHHHHHHHC
T ss_conf             7775876332503999999747--89988999999868999999998-------------29982899999999999859


Q ss_pred             CCCCCCCCCCCCEECCCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCC-CCCCCCCCCCEEEEECCCC
Q ss_conf             000001123441012556654156514642020341455479899999876665431023-3461003772389851532
Q gi|254780674|r  270 PEANVSWTTNAMIRHKHIDISVAVSIPGGIVTPIIRQADQKSILDISLEVKQLAQRAKQR-KLKPEEYQGGTTSISNMGM  348 (423)
Q Consensus       270 P~~Na~~~~~~i~~~~~vnIgiAv~~~~GL~vPvIk~ad~~~l~~i~~~~~~l~~~ar~~-~l~~~d~~ggtftiSNlG~  348 (423)
                      |++|++|+++++.+++++|+|+||++++||++|+|++++++++.++++++.++..+++++ +|.++++.+|||||||+|.
T Consensus        71 Pe~n~~~~~~~i~~~~~i~~~~av~~~~~~~~~~i~~~~~~~l~~f~~~~~~~~~~~~~~~~l~~~~~~~~t~~iS~lg~  150 (219)
T 1q23_A           71 PEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSSLWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPW  150 (219)
T ss_dssp             GGGSEEEETTEEEEESCCEEEEEEEETTTTEEEEEECCCCSSHHHHHHHHHHHHHHHTTCCSSSTTCCCSSEEEEEECTT
T ss_pred             HHHHEEEECCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCC
T ss_conf             68648995997899456346888984898698148058889999999999999999972589994103599899984786


Q ss_pred             CCCCCCCCCCCCCCEEEEEECCCEEEEEEECCEEEEEEEEEEEEEEEECEEEHHHHHHHHHHHHHHHCCH
Q ss_conf             1422101311588716898446312358778937895488989852001140288999999999987198
Q gi|254780674|r  349 LGINSFCAVINPPQSTILAIGAGEKKVVFQNEEIKVATIMNATLSADHRSVDGAIASKLLAKFKEYIENP  418 (423)
Q Consensus       349 ~g~~~~~pii~~pq~aILgvG~~~~~~~~~~~~i~~~~~~~ltls~DHRvidGa~aa~Fl~~~~~~le~P  418 (423)
                      +|.+.+++++++|+.+++++.... ++++.+|    |++|+|||+||||++||+++|+||+.|+++||+.
T Consensus       151 ~~f~~~~~~~~~~~~~~~p~~~~G-k~~~~~g----r~~mplsl~~dHr~vDG~~aa~Fl~~l~~~le~~  215 (219)
T 1q23_A          151 VSFTSFDLNVANMDNFFAPVFTMG-KYYTQGD----KVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEW  215 (219)
T ss_dssp             CCCSEEEEEESCCTTCCSCEEEEC-CCEEETT----EEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCCCCCCCHHEEEEEEECC-CEEEECC----EEEEEEEEEEECHHHCCHHHHHHHHHHHHHHHCC
T ss_conf             674770478889703089998615-5698999----0999999997401427499999999999998540


No 10 
>1zy8_K Pyruvate dehydrogenase protein X component, mitochondrial; human, dihydrolipoamide dehydrogenase, dihydrolipoyl dehydrogenase; HET: FAD; 2.59A {Homo sapiens}
Probab=100.00  E-value=5.5e-44  Score=312.43  Aligned_cols=212  Identities=30%  Similarity=0.373  Sum_probs=144.8

Q ss_pred             CEEEECCCCCCCEEEEEEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEECCCEEEEEECCC
Q ss_conf             34786788788721799999981689785279859999526531245368786899999248860403585599997075
Q gi|254780674|r    3 IHTITMPSLSPTMTEGKLAKWIKQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEILVPAGTENIAVNSPILNILMDS   82 (423)
Q Consensus         3 ~~~i~mP~lGe~m~egtI~~Wl~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~~   82 (423)
                      ..+|+||+|||+|+||+|++|||++||.|++||+||||||||+++|||||++|+|.+|++++|+++++||.+++.|..++
T Consensus         3 ~iei~~P~lge~~~eg~I~~Wlvk~GD~V~~gd~L~evETDKa~~Ev~ap~~G~l~~i~v~eG~~~v~vg~~i~~i~~~~   82 (229)
T 1zy8_K            3 PIKILMPSLSPTMEEGNIVKWLKKEGEAVSAGDALCEIETDKAVVTLDASDDGILAKIVVEEGSKNIRLGSLIGLIVEEG   82 (229)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CEEEECCCCCCCCCEEEEEEEEECCCCEECCCCEEEEEEECCEEEEEEEECCCEEEEEEEECCCCCCCCCCCEEEEECCC
T ss_conf             66994689999862699989981899997799979999928668999872671798877623752124564102320222


Q ss_pred             CCCCCCCCCCCCCC---------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCH
Q ss_conf             42111112221000---------111112222233322222222222234322101111000001101234433222100
Q gi|254780674|r   83 TEIPPSPPLSKENI---------VEVREEHSHSSPVVVREKHSKNRPIASPLARRLAGEHGIDLSSLSGSGPHGRIVKSD  153 (423)
Q Consensus        83 ~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~aSP~aRklA~e~giDl~~V~GTG~~GRItk~D  153 (423)
                      ++............         ...........+.......+..++++||+|||||+|+||||++|.|||++|||+|+|
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asP~aRklA~E~gIdl~~V~GTG~~GRItk~D  162 (229)
T 1zy8_K           83 EDWKHVEIPKDVGPPPPVSKPSEPRPSPEPQISIPVKKEHIPGTLRFRLSPAARNILEKHSLDASQGTATGPRGIFTKED  162 (229)
T ss_dssp             -----------------------------------------------CBCHHHHHHHHHTTCCSSSSCCCSTTSCBCHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHCCCCCCCCCEEHHH
T ss_conf             33333345643334333344344566666655655443222333332348454556878497763510228999497999


Q ss_pred             HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHCCCCC
Q ss_conf             24443200010001112211124444455546543456624655111221101110001232100000122
Q gi|254780674|r  154 IETLISTKTNVKDYSTIQSFGLVDESIDANILNLFAKDSYEVIPHDNIRKTIACRLQQSKQTIPHFYVSID  224 (423)
Q Consensus       154 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~s~irk~ia~~m~~S~~~iPh~~~~~e  224 (423)
                      |++|+.++.........+...... ......      ........+.+|+.++.....   ..||++.+.|
T Consensus       163 V~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~s~~---~~p~~~~t~~  223 (229)
T 1zy8_K          163 ALKLVQLKQTGKITESRPTPAPTA-TPTAPS------PLQATSGPSYPRPVIPPVSTP---GQPNAVGTLE  223 (229)
T ss_dssp             HHHHHHHHHHC------------------------------------------------------------
T ss_pred             HHHHHHHCCCCCCCCCCCCCCCCC-CCCCCC------CCCCCCCCCCCCCCCCCCCCC---CCCCCCEEEE
T ss_conf             999986014578777788888877-887878------865667777774356886568---8883654554


No 11 
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- 2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00  E-value=1.5e-40  Score=289.42  Aligned_cols=193  Identities=13%  Similarity=0.102  Sum_probs=171.5

Q ss_pred             CCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC-
Q ss_conf             2211011100012321000001222332046787775665554320146655432221011100110000000011234-
Q gi|254780674|r  201 IRKTIACRLQQSKQTIPHFYVSIDCNIDNLLSLREQMNRTLQFHREEISNKISVNDIILKAFALAMIQVPEANVSWTTN-  279 (423)
Q Consensus       201 irk~ia~~m~~S~~~iPh~~~~~evd~t~l~~~R~~l~~~~~~~~~~~~~kit~~~~l~kA~a~AL~~~P~~Na~~~~~-  279 (423)
                      .||...+.+...  ..|||+++.++|+|+|+++|++             .|+||+++++||+++||.+||+||++|+++ 
T Consensus        14 ~R~~~f~~f~~~--~~P~~s~t~~iDvt~l~~~~k~-------------~k~sf~~~l~~av~~al~~~Pe~n~~~~~d~   78 (217)
T 2i9d_A           14 ERKENFNFFRHF--QNPQLSITSEVECGGARQRAKA-------------AGQSFFLHYLYAVLRAANEIPEFRYRIDPDG   78 (217)
T ss_dssp             TTHHHHHHHTTC--SBCEEEEEEEEECHHHHHHHHH-------------TTCCHHHHHHHHHHHHHHHSGGGGEEECTTS
T ss_pred             CHHHHHHHHHCC--CCCEEEEEEEEEHHHHHHHHHH-------------CCCCCHHHHHHHHHHHHHHCHHHEEEECCCC
T ss_conf             459999998578--9987999999888999999998-------------3998279999999999863967649984895


Q ss_pred             CCEECCCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC-------CCCCCCCCCCCEEEEECCCCCCCC
Q ss_conf             4101255665415651464202034145547989999987666543102-------334610037723898515321422
Q gi|254780674|r  280 AMIRHKHIDISVAVSIPGGIVTPIIRQADQKSILDISLEVKQLAQRAKQ-------RKLKPEEYQGGTTSISNMGMLGIN  352 (423)
Q Consensus       280 ~i~~~~~vnIgiAv~~~~GL~vPvIk~ad~~~l~~i~~~~~~l~~~ar~-------~~l~~~d~~ggtftiSNlG~~g~~  352 (423)
                      ++++|+++|+|+||++++||++|++++++.+++.++.+++.++.+++|+       +++++.++++|||||||+|.+|.+
T Consensus        79 ~i~~~~~v~i~~av~~~~~~~~~~i~~~~~~~l~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iSnlg~~~ft  158 (217)
T 2i9d_A           79 RVVLYDTIDMLSPIKIKENGKFFTTRFPYHNDFDTFYQEARLIIDAIPEDGDPYAAENEEVADGDYGLILLSATPDLYFT  158 (217)
T ss_dssp             CEEEESCCEEEEEEECSTTSCEEEEEECCCSSHHHHHHHHHHHHHHCCSSCCTTHHHHHHHHHTCCCEEEEEECTTCCCS
T ss_pred             EEEECCCCCEEEEEEECCCCEECEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCC
T ss_conf             79983765579999827994764182488799999999999999998761102431578874567988999568865655


Q ss_pred             CCCCCCCCCCEE---EEEECCCEEEEEEECCEEEEEEEEEEEEEEEECEEEHHHHHHHHHHHHHHHC
Q ss_conf             101311588716---8984463123587789378954889898520011402889999999999871
Q gi|254780674|r  353 SFCAVINPPQST---ILAIGAGEKKVVFQNEEIKVATIMNATLSADHRSVDGAIASKLLAKFKEYIE  416 (423)
Q Consensus       353 ~~~pii~~pq~a---ILgvG~~~~~~~~~~~~i~~~~~~~ltls~DHRvidGa~aa~Fl~~~~~~le  416 (423)
                      ++++++++|+..   +++.|+...    .+|    |.+|++||+||||+|||++||+||+.++++||
T Consensus       159 ~~~~~~~~~~~~~~P~i~~Gk~~~----~~g----r~~mpvslt~DHrviDG~~aa~Fl~~l~~~LE  217 (217)
T 2i9d_A          159 SITGTQEKRSGNNYPLLNAGKAII----REG----RLVMPIAMTIHHGFIDGHHLSLFYKKVEDFLK  217 (217)
T ss_dssp             EECCCBCSTTCCSSCEEEECCCEE----ETT----EEEEEEEEEEETTTCCHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCCCCCCEEEEEECCCEEE----ECC----EEEEEEEEEEECHHHCHHHHHHHHHHHHHHHC
T ss_conf             624666688531788998366688----999----69999978966235481999999999999749


No 12 
>1y8o_B Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: LPA ADP; 2.48A {Homo sapiens} SCOP: b.84.1.1 PDB: 1y8n_B* 1y8p_B* 2pnr_C* 2q8i_B* 1fyc_A
Probab=99.92  E-value=2.6e-25  Score=187.53  Aligned_cols=84  Identities=43%  Similarity=0.782  Sum_probs=78.0

Q ss_pred             CEEEECCCCCCCEEEEEEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEECCCEEEEEECCC
Q ss_conf             34786788788721799999981689785279859999526531245368786899999248860403585599997075
Q gi|254780674|r    3 IHTITMPSLSPTMTEGKLAKWIKQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEILVPAGTENIAVNSPILNILMDS   82 (423)
Q Consensus         3 ~~~i~mP~lGe~m~egtI~~Wl~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~~   82 (423)
                      .++|+||+||++|+||+|++|+|++||.|++||+||+|||||++|||+|+++|+|.++++++|+++++||++|+.|..++
T Consensus        27 ~~~I~mP~lg~~~~Eg~I~~W~vk~GD~V~~gd~L~evETDKa~~EI~A~~~G~l~~i~v~eGd~~v~vG~~Ia~I~~~~  106 (128)
T 1y8o_B           27 HMQVLLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILVPEGTRDVPLGTPLCIIVEKE  106 (128)
T ss_dssp             EEEEECCCSSTTCSEEEEEEECSCTTCEECTTCEEEEEECSSCEEEEECCSCEEEEEESSCTTCCSEETTCEEEEEESSG
T ss_pred             CEEEECCCCCCCCCEEEEEEEEECCCCEEECCCEEEEEECCCEEEEEECCCCEEEEEEEECCCCEEECCCCEEEEEECCC
T ss_conf             73985899999831799989995799998089979999828657988426787999999667983881899899993477


Q ss_pred             CCCC
Q ss_conf             4211
Q gi|254780674|r   83 TEIP   86 (423)
Q Consensus        83 ~~~~   86 (423)
                      ++..
T Consensus       107 ~~~~  110 (128)
T 1y8o_B          107 ADIS  110 (128)
T ss_dssp             GGGG
T ss_pred             CCCC
T ss_conf             6655


No 13 
>2dne_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; lipoyl domain, lipoic acid, 2-oxoacid dehydrogenase; NMR {Homo sapiens}
Probab=99.92  E-value=2.3e-25  Score=187.86  Aligned_cols=85  Identities=41%  Similarity=0.705  Sum_probs=79.5

Q ss_pred             CCCEEEECCCCCCCEEEEEEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEECCCEEEEEEC
Q ss_conf             96347867887887217999999816897852798599995265312453687868999992488604035855999970
Q gi|254780674|r    1 MMIHTITMPSLSPTMTEGKLAKWIKQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEILVPAGTENIAVNSPILNILM   80 (423)
Q Consensus         1 mm~~~i~mP~lGe~m~egtI~~Wl~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~   80 (423)
                      ++.++|+||+||++|+||+|++|||++||.|++||+||+|||||+++||+||++|+|.+|++++|+++|+||++|+.|..
T Consensus         5 ~~~~~i~mP~lg~~~~eg~i~~W~v~~Gd~V~~gd~l~evETdKa~~ev~a~~~G~l~~ilv~eGd~~v~vG~~ia~i~~   84 (108)
T 2dne_A            5 SSGQKVPLPSLSPTMQAGTIARWEKKEGDKINEGDLIAEVETDKATVGFESLEECYMAKILVAEGTRDVPIGAIICITVG   84 (108)
T ss_dssp             CCCEEEECCCCSSSCCEEEEEECSSCTTCEECTTSEEEEEECSSCEEEEECSSSEEEEECSSCTTCCSEETTCEEEEEES
T ss_pred             CCCEEEECCCCCCCCCEEEEEEEEECCCCEEECCCEEEEEECCCEEEEEEECCCEEEEEEEECCCCCEECCCCEEEEEEC
T ss_conf             78608979989998656999899936999980799899998385768986078969999996679848769998999924


Q ss_pred             CCCCC
Q ss_conf             75421
Q gi|254780674|r   81 DSTEI   85 (423)
Q Consensus        81 ~~~~~   85 (423)
                      +.++.
T Consensus        85 ~~e~~   89 (108)
T 2dne_A           85 KPEDI   89 (108)
T ss_dssp             CHHHH
T ss_pred             CCCCC
T ss_conf             86651


No 14 
>3crk_C Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; pyruvate dehydrogenase kinase isozyme 2, glucose metabolism; HET: LA2; 2.30A {Homo sapiens} PDB: 3crl_C*
Probab=99.89  E-value=4e-23  Score=172.96  Aligned_cols=83  Identities=41%  Similarity=0.751  Sum_probs=78.0

Q ss_pred             CCEEEECCCCCCCEEEEEEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEECCCEEEEEECC
Q ss_conf             63478678878872179999998168978527985999952653124536878689999924886040358559999707
Q gi|254780674|r    2 MIHTITMPSLSPTMTEGKLAKWIKQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEILVPAGTENIAVNSPILNILMD   81 (423)
Q Consensus         2 m~~~i~mP~lGe~m~egtI~~Wl~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~   81 (423)
                      +.++|+||+||++|+||+|++|+|++||.|++||+||+|||||+++||+||++|+|.++++++|++.+++|++|+.|..+
T Consensus         4 ~~i~i~mP~lg~~~~eg~i~~W~v~~Gd~V~~gd~l~evEtdK~~~ev~a~~~G~l~~i~v~eGd~~v~vG~~ia~i~~~   83 (87)
T 3crk_C            4 PHMQVLLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDXATIGFEVQEEGYLAKILVPEGTRDVPLGTPLCIIVEK   83 (87)
T ss_dssp             CEEEEECCCSSTTCCEEEEEEECSCTTCEECTTCEEEEEECSSCEEEEECCSCEEEEEESSCTTCCCEETTCEEEEEESS
T ss_pred             CCEEEECCCCCCCCCEEEEEEEECCCCCEEECCCEEEEEEECCEEEEEECCCCEEEEEEEECCCCEEECCCCEEEEEECC
T ss_conf             98699779899986579999986399999978997999990778886871899999999977898297599989999566


Q ss_pred             CCC
Q ss_conf             542
Q gi|254780674|r   82 STE   84 (423)
Q Consensus        82 ~~~   84 (423)
                      +++
T Consensus        84 ~ed   86 (87)
T 3crk_C           84 EAD   86 (87)
T ss_dssp             STT
T ss_pred             CCC
T ss_conf             786


No 15 
>2dnc_A Pyruvate dehydrogenase protein X component; lipoic acid, lipoyl domain, 2-oxoacid dehydrogenase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.89  E-value=3.4e-23  Score=173.38  Aligned_cols=86  Identities=45%  Similarity=0.763  Sum_probs=80.0

Q ss_pred             CCCEEEECCCCCCCEEEEEEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEECCCEEEEEEC
Q ss_conf             96347867887887217999999816897852798599995265312453687868999992488604035855999970
Q gi|254780674|r    1 MMIHTITMPSLSPTMTEGKLAKWIKQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEILVPAGTENIAVNSPILNILM   80 (423)
Q Consensus         1 mm~~~i~mP~lGe~m~egtI~~Wl~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~   80 (423)
                      ++..+|+||+||++|+||+|++|||++||.|++||+||+|||||+++||+||++|+|.++++++|++.++||++|+.|..
T Consensus         5 ~~~i~i~mP~lg~~~~eg~i~~W~v~~Gd~V~~gd~l~evEtdK~~~ev~a~~~G~l~~i~v~~Gd~~v~vG~~i~~i~~   84 (98)
T 2dnc_A            5 SSGIKILMPSLSPTMEEGNIVKWLKKEGEAVSAGDALCEIETDKAVVTLDASDDGILAKIVVEEGSKNIRLGSLIGLIVE   84 (98)
T ss_dssp             CCCEEEECCCCSTTCSEECEEEESSCTTCEECTTSEEEEEECSSCEEEEECSSCEEEEECSSCTTCCCEESSCEEEEEEC
T ss_pred             CCCEEEECCCCCCCCCEEEEEEEEECCCCEEECCCEEEEEECCCEEEEEECCCCEEEEEEEECCCCEEECCCCEEEEEEC
T ss_conf             78789977989998437999999908999993899899998583899997489989999997689829779998999903


Q ss_pred             CCCCCC
Q ss_conf             754211
Q gi|254780674|r   81 DSTEIP   86 (423)
Q Consensus        81 ~~~~~~   86 (423)
                      ++++..
T Consensus        85 ~~e~~~   90 (98)
T 2dnc_A           85 EGEDWK   90 (98)
T ss_dssp             TTSCSS
T ss_pred             CCCCCC
T ss_conf             877534


No 16 
>1ghj_A E2, E2, the dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase...; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1ghk_A
Probab=99.86  E-value=5.7e-22  Score=165.22  Aligned_cols=79  Identities=24%  Similarity=0.527  Sum_probs=75.7

Q ss_pred             CEEEECCCCCCCEEEEEEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEECCCEEEEEECCC
Q ss_conf             34786788788721799999981689785279859999526531245368786899999248860403585599997075
Q gi|254780674|r    3 IHTITMPSLSPTMTEGKLAKWIKQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEILVPAGTENIAVNSPILNILMDS   82 (423)
Q Consensus         3 ~~~i~mP~lGe~m~egtI~~Wl~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~~   82 (423)
                      +.+|+||+||++|+||+|++|+|++||.|++||+||+|||||+++||+||++|+|.++++++| +.+++|++|+.|+.++
T Consensus         1 aiei~vP~lg~~~~eg~i~~w~v~~Gd~V~~gd~l~~vEtdK~~~ei~ap~~G~v~~i~v~~G-~~v~~G~~l~~i~~~G   79 (79)
T 1ghj_A            1 AIDIKAPTFPESIADGTVATWHKKPGEAVKRDELIVDIETDKVVMEVLAEADGVIAEIVKNEG-DTVLSGELLGKLTEGG   79 (79)
T ss_dssp             CEEEECCCCCSSCSCEEECCCSSCTTSEECSSCEEEEEECSSCEEEEECSSCEEEEEESSCTT-CEECTTCEEEEECCCC
T ss_pred             CEEEECCCCCCCCCEEEEEEEECCCCCEEECCCEEEEEECCCEEEEEEECCCEEEEEEEECCC-CEECCCCEEEEEECCC
T ss_conf             907985989998646999999927989990899899999586589998346899999984899-9978999999994799


No 17 
>1k8m_A E2 component of branched-chain ahpha-ketoacid dehydrogenase; lipoyl acid bearing, human BCKD, experimental DATA, average structure, transferase; NMR {Homo sapiens} SCOP: b.84.1.1 PDB: 1k8o_A
Probab=99.83  E-value=1.1e-20  Score=156.71  Aligned_cols=81  Identities=22%  Similarity=0.469  Sum_probs=76.7

Q ss_pred             CEEEECCCCCCCEEEEEEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEECCCEEEEEECCC
Q ss_conf             34786788788721799999981689785279859999526531245368786899999248860403585599997075
Q gi|254780674|r    3 IHTITMPSLSPTMTEGKLAKWIKQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEILVPAGTENIAVNSPILNILMDS   82 (423)
Q Consensus         3 ~~~i~mP~lGe~m~egtI~~Wl~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~~   82 (423)
                      ..+|+||+||++|++|+|++|++++||.|++||+||+|||||+.++|+||++|+|.++++++| |.|++|++|+.|+.++
T Consensus         4 ii~~~~P~lg~~~~~g~i~~w~v~~Gd~V~~Gd~l~~iEt~K~~~ei~a~~~G~I~~i~v~eG-~~V~~G~~L~~Ie~e~   82 (93)
T 1k8m_A            4 VVQFKLSDIGEGIREVTVKEWYVKEGDTVSQFDSICEVQSDKASVTITSRYDGVIKKLYYNLD-DIAYVGKPLVDIETEA   82 (93)
T ss_dssp             CEEEECCSSCTTSCCEEEEEECCCTTCEECSSSCCEEEECSSCEEECCCSSCEEEEEECCCSS-CEECTTSEEEEEECSC
T ss_pred             EEEEECCCCCCCCCEEEEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCEEEEEEEECCC-CEECCCCEEEEEECCC
T ss_conf             079878999998415999999908979998899899998377289788388999999953899-9988999999997778


Q ss_pred             CC
Q ss_conf             42
Q gi|254780674|r   83 TE   84 (423)
Q Consensus        83 ~~   84 (423)
                      ..
T Consensus        83 ~~   84 (93)
T 1k8m_A           83 LK   84 (93)
T ss_dssp             CT
T ss_pred             CC
T ss_conf             75


No 18 
>1pmr_A Dihydrolipoyl succinyltransferase; 2-oxoglutarate dehydrogenase, lipoyl domain, complex, glycolysis; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=99.81  E-value=7.9e-22  Score=164.25  Aligned_cols=77  Identities=27%  Similarity=0.532  Sum_probs=74.0

Q ss_pred             CEEEECCCCCCCEEEEEEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEECCCEEEEEEC
Q ss_conf             347867887887217999999816897852798599995265312453687868999992488604035855999970
Q gi|254780674|r    3 IHTITMPSLSPTMTEGKLAKWIKQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEILVPAGTENIAVNSPILNILM   80 (423)
Q Consensus         3 ~~~i~mP~lGe~m~egtI~~Wl~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~   80 (423)
                      ..+|+||+||++|++|+|++|||++||.|++||+||+|||||+++||+||++|+|.++++++| +.+++|++|+.|+.
T Consensus         2 ~iei~vP~lg~~~~~g~i~~w~v~~Gd~V~~gd~l~eiEtdK~~~ei~a~~~G~l~~i~v~~G-~~v~vG~~l~~i~e   78 (80)
T 1pmr_A            2 SVDILVPDLPESVADATVATWHKKPGDAVVRDEVLVEIETDKVVLEVPASADGILDAVLEDEG-TTVTSRQILGRLRE   78 (80)
T ss_dssp             CCCEECCCCCSCCSCEECCBCCCCTTCCBSSSCCBCBCCSSSCCCCCBCCSBCCCCBCTTCTT-CEECSSSEEEBCCC
T ss_pred             CEEEECCCCCCCCCEEEEEEEEECCCCEECCCCEEEEEECCCEEEEEEECCCEEEEEEEECCC-CEECCCCEEEEEEC
T ss_conf             647988999999758999999907989987999899999386589987036899999986899-99879999999979


No 19 
>1qjo_A Dihydrolipoamide acetyltransferase; lipoyl domain, pyruvate dehydrogenase; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=99.79  E-value=1.7e-19  Score=148.62  Aligned_cols=79  Identities=24%  Similarity=0.436  Sum_probs=75.1

Q ss_pred             CCEEEECCCCCCCEEEEEEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEECCCEEEEEECC
Q ss_conf             63478678878872179999998168978527985999952653124536878689999924886040358559999707
Q gi|254780674|r    2 MIHTITMPSLSPTMTEGKLAKWIKQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEILVPAGTENIAVNSPILNILMD   81 (423)
Q Consensus         2 m~~~i~mP~lGe~m~egtI~~Wl~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~   81 (423)
                      |+++|+||+||++  +++|++|++++||.|++||+||++||||+.++|+||++|+|.++++++| +.+++|++|+.|+.+
T Consensus         1 M~~ei~~P~lg~~--~~~i~~~~v~~Gd~V~~g~~l~~iEt~K~~~~i~a~~~G~v~~i~v~~G-~~v~~G~~l~~ie~~   77 (80)
T 1qjo_A            1 MVKEVNVPDIGGD--EVEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVG-DKVKTGSLIMIFEVE   77 (80)
T ss_dssp             CEEEECCCCCSSS--CEEEEECCCCTTCEECBTSEEEEEESSSSCEEEEBSSCEEEEECCCCTT-CEECTTCCCEEEESC
T ss_pred             CCEEEECCCCCCC--EEEEEEEEECCCCEECCCCEEEEEEECCCCEEEECCCCEEEEEEEECCC-CEECCCCEEEEEECC
T ss_conf             9628987999997--2899999917979998999899999075451998465279999995898-995899999999646


Q ss_pred             CC
Q ss_conf             54
Q gi|254780674|r   82 ST   83 (423)
Q Consensus        82 ~~   83 (423)
                      ++
T Consensus        78 g~   79 (80)
T 1qjo_A           78 GA   79 (80)
T ss_dssp             CC
T ss_pred             CC
T ss_conf             58


No 20 
>1gjx_A Pyruvate dehydrogenase; oxidoreductase, lipoyl domain, dihydrolipoyl dehydrogenase, multienzyme complex, post-translational modification; NMR {Neisseria meningitidis} SCOP: b.84.1.1
Probab=99.76  E-value=1.8e-19  Score=148.50  Aligned_cols=80  Identities=24%  Similarity=0.374  Sum_probs=75.5

Q ss_pred             CCEEEECCCCCCCEEEEEEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEECCCEEEEEECC
Q ss_conf             63478678878872179999998168978527985999952653124536878689999924886040358559999707
Q gi|254780674|r    2 MIHTITMPSLSPTMTEGKLAKWIKQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEILVPAGTENIAVNSPILNILMD   81 (423)
Q Consensus         2 m~~~i~mP~lGe~m~egtI~~Wl~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~   81 (423)
                      ++.+|+||+|| ++++++|++|++++||.|++||+||++||||+.++++||++|+|.++++++| +.|++|++|+.|+.+
T Consensus         1 aiiei~~P~lg-~~~~~~I~~~~v~~Gd~V~~Gd~l~~iEt~K~~~~i~a~~~G~v~~i~v~~G-~~V~~G~~l~~ie~~   78 (81)
T 1gjx_A            1 ALVELKVPDIG-GHENVDIIAVEVNVGDTIAVDDTLITLETDKATMDVPAEVAGVVKEVKVKVG-DKISEGGLIVVVEAE   78 (81)
T ss_dssp             CCEECCCCCCS-SCSSEEEEEECCCSSCBCCSSCCCEEEECSSCEEEECCCCSSBBCCCCCCSS-CEECSSSCCCEECCS
T ss_pred             CEEEEECCCCC-CCCEEEEEEEECCCCCEEECCCEEEEEEECCCEEEEECCCCEEEEEEEECCC-CEECCCCEEEEEECC
T ss_conf             91899889999-8748999999828979990899899999388379998055479999982898-998899999999456


Q ss_pred             CC
Q ss_conf             54
Q gi|254780674|r   82 ST   83 (423)
Q Consensus        82 ~~   83 (423)
                      ++
T Consensus        79 g~   80 (81)
T 1gjx_A           79 GT   80 (81)
T ss_dssp             CC
T ss_pred             CC
T ss_conf             48


No 21 
>1iyu_A E2P, dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1iyv_A
Probab=99.70  E-value=1.1e-16  Score=129.81  Aligned_cols=76  Identities=22%  Similarity=0.402  Sum_probs=70.8

Q ss_pred             EEEECCCCCCCEEEEEEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEECCCEEEEEECCCC
Q ss_conf             47867887887217999999816897852798599995265312453687868999992488604035855999970754
Q gi|254780674|r    4 HTITMPSLSPTMTEGKLAKWIKQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEILVPAGTENIAVNSPILNILMDST   83 (423)
Q Consensus         4 ~~i~mP~lGe~m~egtI~~Wl~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~~~   83 (423)
                      .-|+||++|.   +|+|++|++++||.|++||+||++|++|+.++|+||++|+|.++++++| |.|++|++|+.|+..+.
T Consensus         2 e~i~~P~~g~---~g~i~~~~v~~Gd~V~~G~~l~~iE~~K~~~~i~a~~~G~v~~i~v~~G-~~V~~G~~l~~ie~~~~   77 (79)
T 1iyu_A            2 EIIRVPDIGG---DGEVIELLVKTGDLIEVEQGLVVLESAKASMEVPSPKAGVVKSVSVKLG-DKLKEGDAIIELEPAAG   77 (79)
T ss_dssp             EEEECCCCSS---EEEEEEECCCTTCBCCSSSEEEEEECSSCEEEEECSSSSEEEEESCCTT-CEEETTSEEEEEECCCS
T ss_pred             CEEECCCCCC---CEEEEEEECCCCCEECCCCEEEEEEECCCEEEEECCCCEEEEEEEECCC-CEECCCCEEEEEECCCC
T ss_conf             8798998989---6899999827979990899899999567158998798999999935896-99899999999947867


No 22 
>2k7v_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; misfolded dimer, acyltransferase, glycolysis; NMR {Escherichia coli}
Probab=99.64  E-value=1.9e-17  Score=134.90  Aligned_cols=76  Identities=24%  Similarity=0.445  Sum_probs=71.5

Q ss_pred             CCEEEECCCCCCCEEEEEEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEECCCEEEEEECC
Q ss_conf             63478678878872179999998168978527985999952653124536878689999924886040358559999707
Q gi|254780674|r    2 MIHTITMPSLSPTMTEGKLAKWIKQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEILVPAGTENIAVNSPILNILMD   81 (423)
Q Consensus         2 m~~~i~mP~lGe~m~egtI~~Wl~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~   81 (423)
                      |+++|++|..|+      |++|++++||.|++||+|+++||||+.++|+||++|+|.+|++++| |.|.+|++|+.|+.+
T Consensus         1 M~~~v~~P~~~~------I~~~~v~~Gd~V~~gd~l~~iE~~K~~~~v~a~~~G~v~~i~v~~G-d~V~~G~~l~~ie~~   73 (85)
T 2k7v_A            1 MVKEVNVPDIVE------VTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVG-DKVKTGSLIMIFEVE   73 (85)
T ss_dssp             CCSCCCCCSCCC------CCSCCCSSSCCCCCSSSCCCCSCCCSEEEEECSSCBCCCEECSCTT-CCBCTTSEEEEEECC
T ss_pred             CCCEEECCCCEE------EEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCEEEEEEEECCC-CEECCCCEEEEEECC
T ss_conf             963797999788------9899927999991799899998188379986378989989996898-997999999999748


Q ss_pred             CCC
Q ss_conf             542
Q gi|254780674|r   82 STE   84 (423)
Q Consensus        82 ~~~   84 (423)
                      +..
T Consensus        74 ~~~   76 (85)
T 2k7v_A           74 GAA   76 (85)
T ss_dssp             SSC
T ss_pred             CCC
T ss_conf             877


No 23 
>2ejm_A Methylcrotonoyl-COA carboxylase subunit alpha; biotin-requiring enzyme, biotin, actyl COA carboxylase, fatty acid synthesis, structural genomics; NMR {Homo sapiens}
Probab=99.58  E-value=4.1e-15  Score=119.36  Aligned_cols=66  Identities=20%  Similarity=0.383  Sum_probs=62.2

Q ss_pred             EEEEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEECCCEEEEEECCCC
Q ss_conf             7999999816897852798599995265312453687868999992488604035855999970754
Q gi|254780674|r   17 EGKLAKWIKQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEILVPAGTENIAVNSPILNILMDST   83 (423)
Q Consensus        17 egtI~~Wl~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~~~   83 (423)
                      -|+|++|++++||.|++||+||+|||+|+.++|+||++|+|.+|++++| |.|.+|++|+.|+.+..
T Consensus        22 ~G~i~~~~v~~Gd~V~~g~~l~~vEt~K~~~~i~a~~~G~V~~i~v~~G-d~V~~G~~L~~i~~~~~   87 (99)
T 2ejm_A           22 TGTIEKVFVKAGDKVKAGDSLMVMIAMKMEHTIKSPKDGTVKKVFYREG-AQANRHTPLVEFEEEES   87 (99)
T ss_dssp             SEEEEEECCCTTEEECSSCEEEEEESSSSEEEEECSSCEEEEEESCCTT-EEECTTCBCEEECCCCS
T ss_pred             CEEEEEEECCCCCEECCCCEEEEEECCCCCEEEECCCCCEEEEEEECCC-CEECCCCEEEEEECCCC
T ss_conf             9699999828989986899899997376237998475780879972898-99689998999963887


No 24 
>2dn8_A Acetyl-COA carboxylase 2; biotin required enzyme, transcarboxylase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.52  E-value=1.9e-14  Score=114.94  Aligned_cols=73  Identities=19%  Similarity=0.411  Sum_probs=65.0

Q ss_pred             CCCCCCCEEEEEEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEECCCEEEEEECCC
Q ss_conf             788788721799999981689785279859999526531245368786899999248860403585599997075
Q gi|254780674|r    8 MPSLSPTMTEGKLAKWIKQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEILVPAGTENIAVNSPILNILMDS   82 (423)
Q Consensus         8 mP~lGe~m~egtI~~Wl~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~~   82 (423)
                      .|....+...|+|++|+|++||.|++||+||+|||+|+.++|.||.+|+| ++++++| +.+.+|++|+.|+.+.
T Consensus        16 dp~~v~ap~~G~i~~~~V~~Gd~V~~Gd~l~~iEt~K~~~~V~A~~~G~i-~~~v~~G-~~V~~G~~l~~ie~dd   88 (100)
T 2dn8_A           16 DPTVLRSPSAGKLTQYTVEDGGHVEAGSSYAEMEVMKMIMTLNVQERGRV-KYIKRPG-AVLEAGCVVARLELDD   88 (100)
T ss_dssp             CTTEEECSSCEEEEEESSCTTEEECTTCEEEEEEETTEEEEEECSSSEEE-EECSCTT-CEECSSCEEEEECCSC
T ss_pred             CCCEEECCCCEEEEEEEECCCCEECCCCEEEEEECCCEEEEEECCCCEEE-EEEECCC-CEECCCCEEEEEECCC
T ss_conf             99888789986999999379899858997999982732689977889899-9997898-9999999999996688


No 25 
>1z6h_A Biotin/lipoyl attachment protein; solution structure, biosynthetic protein; HET: BTI; NMR {Bacillus subtilis} PDB: 1z7t_A 2b8f_A 2b8g_A*
Probab=99.49  E-value=6.7e-14  Score=111.25  Aligned_cols=64  Identities=22%  Similarity=0.322  Sum_probs=61.3

Q ss_pred             EEEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEECCCEEEEEECCC
Q ss_conf             99999981689785279859999526531245368786899999248860403585599997075
Q gi|254780674|r   18 GKLAKWIKQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEILVPAGTENIAVNSPILNILMDS   82 (423)
Q Consensus        18 gtI~~Wl~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~~   82 (423)
                      |+|++|++++||.|++||+||++||+|+.++|+||++|+|.++++++| |.+++|++|+.|+.++
T Consensus         8 G~i~~~~v~~Gd~V~~g~~l~~ie~~K~~~~v~a~~~G~v~~i~v~~G-~~V~~G~~l~~i~~~s   71 (72)
T 1z6h_A            8 GNLWKVHVKAGDQIEKGQEVAILESMKMEIPIVADRSGIVKEVKKKEG-DFVNEGDVLLELSNST   71 (72)
T ss_dssp             EEEEEECCCTTCEECTTCEEEEEEETTEEEEEECSSCEEEEEESSCTT-CEECTTCEEEEEGGGC
T ss_pred             EEEEEEECCCCCEECCCCEEEEEECCCCCCCEECCCCEEEEEEEECCC-CEECCCCEEEEEECCC
T ss_conf             899999927989990798999998176553058897989999977897-9989999999994798


No 26 
>2d5d_A Methylmalonyl-COA decarboxylase gamma chain; biotin, domain, BCCP, X-RAY diffraction, structural genomics, NPPSFA; 1.55A {Pyrococcus horikoshii OT3} PDB: 2ejf_C* 2ejg_C* 2evb_A
Probab=99.48  E-value=9.3e-14  Score=110.30  Aligned_cols=60  Identities=28%  Similarity=0.518  Sum_probs=58.5

Q ss_pred             EEEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEECCCEEEEE
Q ss_conf             9999998168978527985999952653124536878689999924886040358559999
Q gi|254780674|r   18 GKLAKWIKQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEILVPAGTENIAVNSPILNI   78 (423)
Q Consensus        18 gtI~~Wl~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i   78 (423)
                      |+|.+|++++||.|++||+||+|||||+.++++||.+|+|.++++++| |.+.+|++|+.|
T Consensus        14 G~v~~~~v~~Gd~V~~g~~l~~iE~~K~~~~i~ap~~G~I~~i~v~~G-~~V~~G~~L~~I   73 (74)
T 2d5d_A           14 GKVLRVLVRVGDRVRVGQGLLVLEAMKMENEIPSPRDGVVKRILVKEG-EAVDTGQPLIEL   73 (74)
T ss_dssp             EEEEEECCCTTCEECTTCEEEEEEETTEEEEEECSSSEEEEEECCCTT-CEECTTCEEEEE
T ss_pred             CEEEEEECCCCCEEECCCEEEEEEECCCEEEEECCCCEEEEEEEECCC-CEECCCCEEEEE
T ss_conf             799999948999993898899999356126998799989989994895-998999999993


No 27 
>2kcc_A Acetyl-COA carboxylase 2; biotinoyl domain, BCCP, BIRA, biotinylation, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase; NMR {Homo sapiens}
Probab=99.45  E-value=7.2e-14  Score=111.03  Aligned_cols=68  Identities=21%  Similarity=0.408  Sum_probs=61.1

Q ss_pred             EEEEEEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEECCCEEEEEECCCCC
Q ss_conf             2179999998168978527985999952653124536878689999924886040358559999707542
Q gi|254780674|r   15 MTEGKLAKWIKQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEILVPAGTENIAVNSPILNILMDSTE   84 (423)
Q Consensus        15 m~egtI~~Wl~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~~~~   84 (423)
                      ...|+|++|++++||.|++||+|++|||+|+.++|+||.+|+|.+ ++++| +.+++|++|+.|+.+..+
T Consensus        11 p~~G~i~~~~V~~Gd~V~~G~~l~~iEa~K~~~~I~ap~sG~I~~-~v~~G-d~V~~G~~l~~ie~~d~e   78 (84)
T 2kcc_A           11 PSAGKLTQYTVEDGGHVEAGSSYAEMEVMKMIMTLNVQERGRVKY-IKRPG-AVLEAGCVVARLELDDLE   78 (84)
T ss_dssp             SSSCCEEEESSCTTEEECTTCEEEEEECSSCEEEEECSSSEEEEE-CSCTT-CCCCTTCCCEEEECSCSC
T ss_pred             CCCEEEEEEEECCCCEECCCCEEEEEECCCEEEEEECCCCEEEEE-EECCC-CEECCCCEEEEEECCCCC
T ss_conf             988599999957989991798699998474478998688989999-98898-999999999999458851


No 28 
>1dcz_A Transcarboxylase 1.3S subunit; antiparallel beta sheet, hammerhead, biocytin, transferase; NMR {Propionibacterium freudenreichiisubsp} SCOP: b.84.1.1 PDB: 1dd2_A 1o78_A
Probab=99.41  E-value=3.9e-13  Score=106.12  Aligned_cols=60  Identities=22%  Similarity=0.445  Sum_probs=58.3

Q ss_pred             EEEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEECCCEEEEE
Q ss_conf             9999998168978527985999952653124536878689999924886040358559999
Q gi|254780674|r   18 GKLAKWIKQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEILVPAGTENIAVNSPILNI   78 (423)
Q Consensus        18 gtI~~Wl~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i   78 (423)
                      |+|.+|++++||.|++||+||+||++|..++|+||++|++.++++++| |.+..|++|+.|
T Consensus        17 G~i~~~~V~~Gd~V~~Gq~l~~iEamK~~~~v~ap~~G~I~~i~v~~G-~~V~~G~~L~~I   76 (77)
T 1dcz_A           17 GTVSKILVKEGDTVKAGQTVLVLEAMKMETEINAPTDGKVEKVLVKER-DAVQGGQGLIKI   76 (77)
T ss_dssp             CEEEEECCCTTCEECTTSEEEEEEETTEEEEEECSSSEEEEEECCCTT-CBCCBTSEEEEE
T ss_pred             EEEEEEECCCCCEECCCCEEEEEEECCCEEEEECCCCEEEEEEEECCC-CEECCCCEEEEE
T ss_conf             599999838989986999899999435117997799979989981896-997999999994


No 29 
>2jku_A Propionyl-COA carboxylase alpha chain, mitochondrial; ligase, biotin, ATP-binding, disease mutation, nucleotide-binding, mitochondrion; HET: PG4; 1.5A {Homo sapiens}
Probab=99.39  E-value=6.6e-14  Score=111.29  Aligned_cols=75  Identities=16%  Similarity=0.347  Sum_probs=67.3

Q ss_pred             EEEECCCCCCCEEE----EEEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEECCCEEEEEE
Q ss_conf             47867887887217----99999981689785279859999526531245368786899999248860403585599997
Q gi|254780674|r    4 HTITMPSLSPTMTE----GKLAKWIKQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEILVPAGTENIAVNSPILNIL   79 (423)
Q Consensus         4 ~~i~mP~lGe~m~e----gtI~~Wl~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~   79 (423)
                      ..+.++.+++++-.    |+|++|++++||.|++||+||+||++|..++|+||++|+|.+|++++| |.|..|++|+.|+
T Consensus        16 ~n~~~~~~~~~~i~aP~~G~V~~i~V~~Gd~V~~G~~l~~iEsmK~~~~v~Ap~~G~V~~i~v~~G-d~V~~G~~L~~Ie   94 (94)
T 2jku_A           16 ENLYFQSMTSSVLRSPMPGVVVAVSVKPGDAVAEGQEICVIEAMKMQNSMTAGKTGTVKSVHCQAG-DTVGEGDLLVELE   94 (94)
T ss_dssp             --------CCCCCCCSSSCEEEEECCCTTCCCCTTCCCEEEEC-------------------------------------
T ss_pred             CEEEECCCCCCEEECCCCCEEEEEECCCCCEECCCCEEEEEECCCCCEEEEECCCEEEEEEEECCC-CEECCCCEEEEEC
T ss_conf             404112786898989999689899818999995898799998036538999388999989986897-9979999999979


No 30 
>2coo_A Lipoamide acyltransferase component of branched- chain alpha-keto acid dehydrogenase...; E3_binding domain; NMR {Homo sapiens}
Probab=99.25  E-value=1.3e-12  Score=102.55  Aligned_cols=52  Identities=38%  Similarity=0.585  Sum_probs=45.0

Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCC
Q ss_conf             2222222234322101111000001101234433222100244432000100
Q gi|254780674|r  114 KHSKNRPIASPLARRLAGEHGIDLSSLSGSGPHGRIVKSDIETLISTKTNVK  165 (423)
Q Consensus       114 ~~~~~~~~aSP~aRklA~e~giDl~~V~GTG~~GRItk~DV~~~~~~~~~~~  165 (423)
                      ..+..++++||+||+||+|+||||++|.|||++|||+|+||++|+.+.....
T Consensus        10 ~~~~~~~~asP~arklA~e~gidl~~I~GTG~~GRI~k~Dv~~~~~~~~~~~   61 (70)
T 2coo_A           10 EIKGRKTLATPAVRRLAMENNIKLSEVVGSGKDGRILKEDILNYLEKQTGAI   61 (70)
T ss_dssp             CCSCCSCCSCHHHHHHHHHHTCCGGGSCCCSTTSCCCHHHHHHHHHHHHTCC
T ss_pred             CCCCCCEECCHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHHCCCCCC
T ss_conf             4679885259999999999499887877649999581999999997215788


No 31 
>1w4i_A Pyruvate dehydrogenase E2; transferase, peripheral-subunit binding domain, ultrafast folding, homologues,; NMR {Pyrobaculum aerophilum} PDB: 1w4j_A 1w4k_A
Probab=99.18  E-value=3.6e-12  Score=99.70  Aligned_cols=47  Identities=40%  Similarity=0.607  Sum_probs=42.5

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf             22222343221011110000011012344332221002444320001
Q gi|254780674|r  117 KNRPIASPLARRLAGEHGIDLSSLSGSGPHGRIVKSDIETLISTKTN  163 (423)
Q Consensus       117 ~~~~~aSP~aRklA~e~giDl~~V~GTG~~GRItk~DV~~~~~~~~~  163 (423)
                      +.++++||+||+||+|+||||++|.|||++|||||+||++|+.+...
T Consensus         2 ~~~v~asP~aRkla~e~gidl~~V~gTG~~GRI~k~DV~~~~~~~~~   48 (62)
T 1w4i_A            2 SREVAAMPAARRLAKELGIDLSKVKGTGPGGVITVEDVKRYAEETAK   48 (62)
T ss_dssp             CCSSEECHHHHHHHHHHTCCGGGSCCCSTTSEECHHHHHHHHHHHHS
T ss_pred             CCCCCCCHHHHHHHHHCCCCHHHCCCCCCCCCEEHHHHHHHHHCCCC
T ss_conf             97650699999999992998877616899993839999999973468


No 32 
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi}
Probab=99.13  E-value=1.7e-10  Score=88.47  Aligned_cols=14  Identities=21%  Similarity=0.283  Sum_probs=7.3

Q ss_pred             CCCCCCCCCCCCHH
Q ss_conf             12344332221002
Q gi|254780674|r  141 SGSGPHGRIVKSDI  154 (423)
Q Consensus       141 ~GTG~~GRItk~DV  154 (423)
                      .|..-..||..+|-
T Consensus       331 ~Ghaie~Ri~AEdp  344 (681)
T 3n6r_A          331 TGWAIENRLYAEDP  344 (681)
T ss_dssp             CSEEEEEEEESEEG
T ss_pred             CCCCCCCEEEEECC
T ss_conf             67314550000265


No 33 
>1zwv_A Lipoamide acyltransferase component of branched- chain alpha-keto acid dehydrogenase...; subunit binding domain; NMR {Homo sapiens}
Probab=99.12  E-value=8e-12  Score=97.36  Aligned_cols=47  Identities=43%  Similarity=0.665  Sum_probs=43.3

Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCC
Q ss_conf             22222234322101111000001101234433222100244432000
Q gi|254780674|r  116 SKNRPIASPLARRLAGEHGIDLSSLSGSGPHGRIVKSDIETLISTKT  162 (423)
Q Consensus       116 ~~~~~~aSP~aRklA~e~giDl~~V~GTG~~GRItk~DV~~~~~~~~  162 (423)
                      +..++++||+||+||+|+||||++|.|||++|||+++||++|++++.
T Consensus         4 ~g~~v~aSP~aRklA~e~gIdl~~I~GTG~~GRItk~DV~~~i~~~~   50 (58)
T 1zwv_A            4 KGRKTLATPAVRRLAMENNIKLSEVVGSGKDGRILKEDILNYLEKQT   50 (58)
T ss_dssp             CCCCCCSCHHHHHHHHHTTCCSSSSSSCCSSSCCCHHHHHHHHHSCC
T ss_pred             CCCCEECCHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHHCCC
T ss_conf             78864469999999999399887865769999480999999997066


No 34 
>1w85_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: a.9.1.1 PDB: 1w88_I* 1w4g_A 1w4e_A 1w4f_A 2pdd_A 2pde_A 1ebd_C*
Probab=99.11  E-value=8.4e-12  Score=97.20  Aligned_cols=46  Identities=35%  Similarity=0.692  Sum_probs=42.3

Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHC
Q ss_conf             2222223432210111100000110123443322210024443200
Q gi|254780674|r  116 SKNRPIASPLARRLAGEHGIDLSSLSGSGPHGRIVKSDIETLISTK  161 (423)
Q Consensus       116 ~~~~~~aSP~aRklA~e~giDl~~V~GTG~~GRItk~DV~~~~~~~  161 (423)
                      ++.++++||+||++|+|+||||++|.|||++|||+|+||++|+++.
T Consensus         3 p~~~v~asP~arkla~e~gidl~~i~GTG~~GrItk~Dv~~~~~~~   48 (49)
T 1w85_I            3 PNRRVIAMPSVRKYAREKGVDIRLVQGTGKNGRVLKEDIDAFLAGG   48 (49)
T ss_dssp             ---CCCCCHHHHHHHHHTTCCTTTSCCCSGGGCCCHHHHHHHHCC-
T ss_pred             CCCCEECCHHHHHHHHHCCCCHHHCCCCCCCCCEEHHHHHHHHHCC
T ss_conf             9986101999999999949988887566999948199999999756


No 35 
>1bdo_A Acetyl-COA carboxylase; BCCPSC, carboxyl transferase, fatty acid biosynthesis, hammerhead structure, selenomethionine, ligase; HET: BTN; 1.80A {Escherichia coli} SCOP: b.84.1.1 PDB: 2bdo_A* 1a6x_A 3bdo_A
Probab=99.11  E-value=8.4e-11  Score=90.54  Aligned_cols=58  Identities=31%  Similarity=0.548  Sum_probs=55.1

Q ss_pred             EEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEECCCEEEEEE
Q ss_conf             99981689785279859999526531245368786899999248860403585599997
Q gi|254780674|r   21 AKWIKQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEILVPAGTENIAVNSPILNIL   79 (423)
Q Consensus        21 ~~Wl~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~   79 (423)
                      .++++++||+|++||+||.+|++|..++|.||++|++.+|++++| +.|..|++|+.|+
T Consensus        23 ~~~~V~~Gd~V~~g~~l~~iEamK~~~~i~a~~~G~V~~i~v~~G-~~V~~G~~L~~ie   80 (80)
T 1bdo_A           23 AKAFIEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESG-QPVEFDEPLVVIE   80 (80)
T ss_dssp             SCCSCCTTCEECTTCEEEEEEETTEEEEEECSSCEEEEEECSCTT-CEECTTCEEEEEC
T ss_pred             CCCEECCCCEEECCCEEEEEEECCCHHHCCCCCCEEEEEEEECCC-CEECCCCEEEEEC
T ss_conf             985326899996687899999762012065999989989986897-9989999999979


No 36 
>2eq9_C Pyruvate dehydrogenase complex, dihydrolipoamide acetyltranferase E2 component; protein-protein complex, oxidoreductase; HET: FAD; 2.09A {Thermus thermophilus HB8}
Probab=99.05  E-value=2.4e-11  Score=94.10  Aligned_cols=40  Identities=40%  Similarity=0.672  Sum_probs=38.1

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
Q ss_conf             2234322101111000001101234433222100244432
Q gi|254780674|r  120 PIASPLARRLAGEHGIDLSSLSGSGPHGRIVKSDIETLIS  159 (423)
Q Consensus       120 ~~aSP~aRklA~e~giDl~~V~GTG~~GRItk~DV~~~~~  159 (423)
                      ++|||+||++|+|+||||++|.|||++||||++||++|+.
T Consensus         1 i~AsP~arklA~e~gidl~~i~GtG~~GRItk~DV~~~~~   40 (41)
T 2eq9_C            1 MLAVPAARKLARELGIPIEEVPGSGPLGRVRVEDVRAYAE   40 (41)
T ss_dssp             CCBCHHHHHHHHHTTCCGGGSCCCSTTCCBCHHHHHHHHC
T ss_pred             CCCCHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHH
T ss_conf             9168999999999499998880789999581999999983


No 37 
>2f60_K Pyruvate dehydrogenase protein X component; protein-binding protein, E3BD, protein binding; 1.55A {Homo sapiens} PDB: 2f5z_K
Probab=99.03  E-value=2.5e-11  Score=94.07  Aligned_cols=48  Identities=31%  Similarity=0.427  Sum_probs=42.9

Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf             222222343221011110000011012344332221002444320001
Q gi|254780674|r  116 SKNRPIASPLARRLAGEHGIDLSSLSGSGPHGRIVKSDIETLISTKTN  163 (423)
Q Consensus       116 ~~~~~~aSP~aRklA~e~giDl~~V~GTG~~GRItk~DV~~~~~~~~~  163 (423)
                      ...++.+||+||+||+|+||||++|.|||++|||+|+||++|+.....
T Consensus         6 ~~~~~~~sPaarkla~e~gidl~~I~gTG~~GRI~k~DV~~~i~~~~~   53 (64)
T 2f60_K            6 GTLRFRLSPAARNILEKHSLDASQGTATGPRGIFTKEDALKLVQLKQT   53 (64)
T ss_dssp             TCHHHHBCHHHHHHHHHTTCCGGGSCCCSGGGCBCHHHHHHHHHHHHH
T ss_pred             CCCCEECCHHHHHHHHHCCCCHHHCCCCCCCCEEEHHHHHHHHHHCCC
T ss_conf             988885299999999994998433256799982959999999983345


No 38 
>1bal_A Dihydrolipoamide succinyltransferase; glycolysis; NMR {Escherichia coli} SCOP: a.9.1.1 PDB: 1bbl_A 1w4h_A 2wav_A 2wxc_A 2btg_A 2bth_A 2cyu_A
Probab=99.03  E-value=4.3e-11  Score=92.48  Aligned_cols=45  Identities=36%  Similarity=0.654  Sum_probs=40.4

Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
Q ss_conf             222222343221011110000011012344332221002444320
Q gi|254780674|r  116 SKNRPIASPLARRLAGEHGIDLSSLSGSGPHGRIVKSDIETLIST  160 (423)
Q Consensus       116 ~~~~~~aSP~aRklA~e~giDl~~V~GTG~~GRItk~DV~~~~~~  160 (423)
                      ......+||+||++|+|+||||++|.|||++|||||+||++|++.
T Consensus         6 ~~~~~~~sPa~rkla~e~gidl~~I~gtG~~GrItk~DV~~~i~~   50 (51)
T 1bal_A            6 EQNNDALSPAIRRLLAEHNLDASAIKGTGVGGRLTREDVEKHLAK   50 (51)
T ss_dssp             CCSSCCCCGGGTTHHHHTTCCTTSSCCCSTTSCCCHHHHTTTSCC
T ss_pred             CCCCCCCCHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHHC
T ss_conf             667886199999999993998988817899994919999999973


No 39 
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA SAP; 2.00A {Rhizobium etli cfn 42}
Probab=99.00  E-value=3.2e-10  Score=86.65  Aligned_cols=16  Identities=13%  Similarity=0.328  Sum_probs=6.9

Q ss_pred             CCCCEECCCCEEEEEE
Q ss_conf             6897852798599995
Q gi|254780674|r   26 QEGDKISPGDILCEIE   41 (423)
Q Consensus        26 k~GD~V~~gd~l~eVE   41 (423)
                      ..|..|.-++.-|.++
T Consensus       236 ~~g~~~~~~~r~cs~q  251 (1165)
T 2qf7_A          236 THGNVVHLFERDCSVQ  251 (1165)
T ss_dssp             TTSCEEEEEEEEEEEE
T ss_pred             CCCCEEEEECCCCCCC
T ss_conf             8898899717888887


No 40 
>2eq7_C 2-oxoglutarate dehydrogenase E2 component; protein-protein complex, oxidoreductase, structural genomics, NPPSFA; HET: FAD NAD; 1.80A {Thermus thermophilus HB8}
Probab=99.00  E-value=3.9e-11  Score=92.75  Aligned_cols=39  Identities=36%  Similarity=0.630  Sum_probs=37.3

Q ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
Q ss_conf             234322101111000001101234433222100244432
Q gi|254780674|r  121 IASPLARRLAGEHGIDLSSLSGSGPHGRIVKSDIETLIS  159 (423)
Q Consensus       121 ~aSP~aRklA~e~giDl~~V~GTG~~GRItk~DV~~~~~  159 (423)
                      +|||+||++|+|+|||+++|+|||++|||+|+||++|++
T Consensus         1 lAsPaarkla~e~gidl~~i~GsG~~GRItk~DV~~~i~   39 (40)
T 2eq7_C            1 LAMPAAERLMQEKGVSPAEVQGTGLGGRILKEDVMRHLE   39 (40)
T ss_dssp             CCCHHHHHHHHHTTCCTTTSCCCSSSSCCCHHHHTTC--
T ss_pred             CCCHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHH
T ss_conf             989899999999399998871789999583999999982


No 41 
>2eq8_C Pyruvate dehydrogenase complex, dihydrolipoamide acetyltransferase E2 component; protein-protein complex, oxidoreductase; HET: FAD; 1.94A {Thermus thermophilus HB8}
Probab=98.94  E-value=1.1e-10  Score=89.80  Aligned_cols=38  Identities=45%  Similarity=0.727  Sum_probs=36.3

Q ss_pred             CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
Q ss_conf             34322101111000001101234433222100244432
Q gi|254780674|r  122 ASPLARRLAGEHGIDLSSLSGSGPHGRIVKSDIETLIS  159 (423)
Q Consensus       122 aSP~aRklA~e~giDl~~V~GTG~~GRItk~DV~~~~~  159 (423)
                      +||+||++|+|+||||++|+|||++||||++||++|..
T Consensus         2 AsP~arklA~e~gidl~~V~gTG~~GrItk~DV~~~~g   39 (40)
T 2eq8_C            2 AAPSIRRLARELGVDLTRLRGTGLAGRITEEDVRRAAG   39 (40)
T ss_dssp             CCHHHHHHHHHHTCCGGGCCCCSTTSCCCHHHHHHHHC
T ss_pred             CCHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHC
T ss_conf             79899999999399898880789999694999998737


No 42 
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=98.85  E-value=8.1e-10  Score=83.95  Aligned_cols=20  Identities=10%  Similarity=-0.071  Sum_probs=9.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHH
Q ss_conf             55479899999876665431
Q gi|254780674|r  307 ADQKSILDISLEVKQLAQRA  326 (423)
Q Consensus       307 ad~~~l~~i~~~~~~l~~~a  326 (423)
                      .|...|.++++-|.+.....
T Consensus       366 iD~~~l~~is~~~e~vr~~y  385 (718)
T 3bg3_A          366 VPMERVFDYSEYWEGARGLY  385 (718)
T ss_dssp             CCHHHHHHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHHHHHHHHH
T ss_conf             77999999999999999775


No 43 
>2k32_A A; NMR {Campylobacter jejuni} PDB: 2k33_A*
Probab=98.04  E-value=7e-06  Score=57.61  Aligned_cols=62  Identities=26%  Similarity=0.466  Sum_probs=32.2

Q ss_pred             EEEEEEEEECCCCEECCCCEEEEEECCCCE-----------------------------EEEECCCCCEEEEEEECCCCC
Q ss_conf             799999981689785279859999526531-----------------------------245368786899999248860
Q gi|254780674|r   17 EGKLAKWIKQEGDKISPGDILCEIETDKAI-----------------------------MEFESVDEGIIDEILVPAGTE   67 (423)
Q Consensus        17 egtI~~Wl~k~GD~V~~gd~l~eVETDKa~-----------------------------~ev~S~~~G~l~~i~v~eG~e   67 (423)
                      .|.|.++++++||.|++||+|+.++.+.+-                             ..|.||++|++.++.+++| +
T Consensus         9 ~G~V~~i~v~eG~~V~kGq~L~~ld~~~a~~~~~r~~~l~~~~~vS~~~~d~a~~~L~~~~I~AP~~G~V~~~~~~~G-~   87 (116)
T 2k32_A            9 SGVIVNKLFKAGDKVKKGQTLFIIEQDQASKDFNRSKALFSQSAISQKEYDSSLATLDHTEIKAPFDGTIGDALVNIG-D   87 (116)
T ss_dssp             CEEEEEECSCTTSEECTTCEEEEEECTTTSHHHHHHHHHTGGGCCSTTTTTHHHHTTTEEEEECSSSEEECCCSCCTT-C
T ss_pred             CEEEEEEECCCCCEECCCCEEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECCCCEEEEEEECCCC-C
T ss_conf             889999988898998899899987621113355455442002300123269999755178998898879998987999-9


Q ss_pred             EEECCC-EEEEEE
Q ss_conf             403585-599997
Q gi|254780674|r   68 NIAVNS-PILNIL   79 (423)
Q Consensus        68 ~v~VG~-~i~~i~   79 (423)
                      .|..|+ +|+.|.
T Consensus        88 ~V~~g~~~l~~I~  100 (116)
T 2k32_A           88 YVSASTTELVRVT  100 (116)
T ss_dssp             EECTTTSCCEEEE
T ss_pred             EECCCCCEEEEEE
T ss_conf             8889995489997


No 44 
>1hpc_A H protein of the glycine cleavage system; transit peptide; HET: LPA; 2.00A {Pisum sativum} SCOP: b.84.1.1 PDB: 1dxm_A* 1htp_A*
Probab=97.33  E-value=0.00025  Score=47.20  Aligned_cols=42  Identities=19%  Similarity=0.226  Sum_probs=37.0

Q ss_pred             EEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEE
Q ss_conf             9999981689785279859999526531245368786899999
Q gi|254780674|r   19 KLAKWIKQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEIL   61 (423)
Q Consensus        19 tI~~Wl~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~   61 (423)
                      .-+++ .++|+.|++|++++.||+.|++.++.||.+|.|.++-
T Consensus        39 ~~v~l-p~~g~~v~~g~~~~~iEs~k~~~~i~sPvsG~vv~vN   80 (131)
T 1hpc_A           39 VFVEL-PEPGVSVTKGKGFGAVESVKATSDVNSPISGEVIEVN   80 (131)
T ss_dssp             EEEEC-CCTTCEECBTSEEEEEEESSCEEEEEBSSCEEEEEEC
T ss_pred             EEEEC-CCCCCEEECCCEEEEEEECCCEEEEEECCCEEEEEEC
T ss_conf             99978-9998775279728999984510013302434999851


No 45 
>1onl_A Glycine cleavage system H protein; hybrid barrel-sandwich structure, structural genomics, riken structural genomics/proteomics initiative; 2.50A {Thermus thermophilus} SCOP: b.84.1.1
Probab=97.32  E-value=0.00029  Score=46.83  Aligned_cols=42  Identities=17%  Similarity=0.246  Sum_probs=37.0

Q ss_pred             EEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEE
Q ss_conf             9999981689785279859999526531245368786899999
Q gi|254780674|r   19 KLAKWIKQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEIL   61 (423)
Q Consensus        19 tI~~Wl~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~   61 (423)
                      .-++ +.++|+.|++||+++.||+.|++.++.||.+|+|.++-
T Consensus        39 ~~v~-lp~~g~~v~~g~~~~~vEs~k~~~~i~sPvsG~Vv~vN   80 (128)
T 1onl_A           39 VYVE-LPEVGRVVEKGEAVAVVESVKTASDIYAPVAGEIVEVN   80 (128)
T ss_dssp             EEEE-CBCTTCEECTTCEEEEEEESSBEEEEECSSSEEEEEEC
T ss_pred             EEEE-CCCCCCHHCCCCEEEEEEECCEEEECCCCCCCEEEEEH
T ss_conf             8997-79998521079617999975405301389772589870


No 46 
>3mxu_A Glycine cleavage system H protein; seattle structural genomics center for infectious disease, S CAT-scratch disease, bacteremia; HET: CIT; 1.80A {Bartonella henselae}
Probab=97.28  E-value=0.00031  Score=46.56  Aligned_cols=46  Identities=26%  Similarity=0.278  Sum_probs=39.0

Q ss_pred             EEEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECC
Q ss_conf             99999981689785279859999526531245368786899999248
Q gi|254780674|r   18 GKLAKWIKQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEILVPA   64 (423)
Q Consensus        18 gtI~~Wl~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~v~e   64 (423)
                      ..-++ |.++|+.|++||+++.||+.|++.++-||.+|+|.++--..
T Consensus        56 I~~v~-lp~~g~~v~~g~~~~~IEs~K~v~~i~sPvsG~VvevN~~l  101 (143)
T 3mxu_A           56 LVFID-LPQNGTKLSKGDAAAVVESVKAASDVYAPLDGEVVEINAAL  101 (143)
T ss_dssp             EEEEE-CCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECGGG
T ss_pred             EEEEE-ECCCCCEEECCCEEEEEEECCEEEEEECCCCEEEEEECHHH
T ss_conf             89999-45887678359708999844558864303546999860444


No 47 
>3hgb_A Glycine cleavage system H protein; ssgcid, niaid, decode, UW, SBRI, lipoyl; 1.75A {Mycobacterium tuberculosis} PDB: 3ift_A
Probab=97.27  E-value=0.00033  Score=46.43  Aligned_cols=42  Identities=17%  Similarity=0.374  Sum_probs=36.9

Q ss_pred             EEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEE
Q ss_conf             9999981689785279859999526531245368786899999
Q gi|254780674|r   19 KLAKWIKQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEIL   61 (423)
Q Consensus        19 tI~~Wl~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~   61 (423)
                      .-++ +..+|+.|++||+++.||+.|++.++.||.+|+|.++-
T Consensus        62 ~~v~-lp~~g~~v~~gd~~~~vEs~K~~~~i~sPvsG~Vv~vN  103 (155)
T 3hgb_A           62 VFVQ-LPVIGTAVTAGETFGEVESTKSVSDLYAPISGKVSEVN  103 (155)
T ss_dssp             EEEE-CCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEEC
T ss_pred             EEEE-ECCCCCEEECCCEEEEEEECCEEECCCCCCCCEEEEEC
T ss_conf             9998-15799676079768999983402010278363578852


No 48 
>1zko_A Glycine cleavage system H protein; TM0212, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.65A {Thermotoga maritima} PDB: 2ka7_A
Probab=97.25  E-value=0.00036  Score=46.19  Aligned_cols=44  Identities=20%  Similarity=0.294  Sum_probs=37.4

Q ss_pred             EEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEEC
Q ss_conf             999998168978527985999952653124536878689999924
Q gi|254780674|r   19 KLAKWIKQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEILVP   63 (423)
Q Consensus        19 tI~~Wl~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~v~   63 (423)
                      .-++ +.++|+.|++|++++.||+.|++.++-||++|+|.++--.
T Consensus        48 ~~v~-lp~~G~~v~~g~~~~~iEs~K~~~~i~sPvsG~Vv~vN~~   91 (136)
T 1zko_A           48 VYVD-LPEVGREVKKGEVVASIESVKAAADVYAPLSGKIVEVNEK   91 (136)
T ss_dssp             EEEE-CCCTTCEECTTCEEEEEEESSCEEEEECSSCEEEEEECGG
T ss_pred             EEEE-CCCCCCEEECCCEEEEEEECCCEEEEECCCCEEEEEEHHH
T ss_conf             7997-7999988655976899998661577750354599986564


No 49 
>3klr_A Glycine cleavage system H protein; antiparallel beta sheet, beta sandwich, oxidoreductase; HET: GOL; 0.88A {Bos taurus} PDB: 2edg_A
Probab=97.24  E-value=0.00037  Score=46.05  Aligned_cols=45  Identities=22%  Similarity=0.196  Sum_probs=38.1

Q ss_pred             EEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECC
Q ss_conf             9999981689785279859999526531245368786899999248
Q gi|254780674|r   19 KLAKWIKQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEILVPA   64 (423)
Q Consensus        19 tI~~Wl~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~v~e   64 (423)
                      +-+++ ..+|+.|++||+++.||+.|++.++.||.+|.|.++--..
T Consensus        35 ~~v~l-p~~g~~v~~g~~~~~iEs~k~~~~i~sPvsG~Vv~~N~~l   79 (125)
T 3klr_A           35 VYCSL-PEVGTKLNKQEEFGALESVKAASELYSPLSGEVTEINKAL   79 (125)
T ss_dssp             EEEEC-CCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECGGG
T ss_pred             EEEEC-CCCCCEEECCCEEEEEEECCEEEEEECCCCEEEEEEHHHH
T ss_conf             99937-9999898548607999973236675103442566750435


No 50 
>3a7l_A H-protein, glycine cleavage system H protein; lipoic acid, lipoyl, transport protein; 1.30A {Escherichia coli} PDB: 3a7a_B 3ab9_A* 3a8i_E* 3a8j_E* 3a8k_E*
Probab=97.22  E-value=0.00041  Score=45.82  Aligned_cols=47  Identities=19%  Similarity=0.136  Sum_probs=39.1

Q ss_pred             EEEEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECC
Q ss_conf             799999981689785279859999526531245368786899999248
Q gi|254780674|r   17 EGKLAKWIKQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEILVPA   64 (423)
Q Consensus        17 egtI~~Wl~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~v~e   64 (423)
                      +..-+++ .++|+.|++||+++.||+.|++.++-||++|+|.++--..
T Consensus        38 ~i~~v~l-p~~g~~v~~g~~~~~vEs~K~v~~i~sPvsG~Vv~vN~~l   84 (128)
T 3a7l_A           38 DMVFVDL-PEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDAL   84 (128)
T ss_dssp             SEEEEEC-CCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECGGG
T ss_pred             CEEEEEC-CCCCCEECCCCCEEEEEECCEEECCCCCCCCEEEEECHHH
T ss_conf             7589977-9998771279703555403503111257562588752545


No 51 
>3lnn_A Membrane fusion protein (MFP-RND) heavy metal CAT tricomponent efflux HMXB (CZCB-LIKE)...; structural genomics, PSI-2; 2.80A {Cupriavidus metallidurans}
Probab=97.09  E-value=0.0011  Score=42.80  Aligned_cols=43  Identities=16%  Similarity=0.203  Sum_probs=34.8

Q ss_pred             EEEECC-CCEEEEECCCCCEEEEEEECCCCCEEECCCEEEEEECC
Q ss_conf             999526-53124536878689999924886040358559999707
Q gi|254780674|r   38 CEIETD-KAIMEFESVDEGIIDEILVPAGTENIAVNSPILNILMD   81 (423)
Q Consensus        38 ~eVETD-Ka~~ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~   81 (423)
                      ..|+.+ .-..++.++.+|+|.++++++| +.|+-|++|+.|+..
T Consensus        48 G~v~~~p~~~~~l~~~v~G~V~~i~v~~G-~~V~kGq~L~~id~~   91 (359)
T 3lnn_A           48 AMIEADPAKLVKVLPPLAGRIVSLNKQLG-DEVKAGDVLFTIDSA   91 (359)
T ss_dssp             EEEECCSSSEEEECCSSCEEEEECCSCTT-CEECTTCEEEEEECS
T ss_pred             EEEEECCCEEEEEECCCCEEEEEEECCCC-CEECCCCEEEEECHH
T ss_conf             99997755799996777789999998991-998899989999859


No 52 
>3cdx_A Succinylglutamatedesuccinylase/aspartoacylase; structural genomics, PSI-2, protein structure initiative; 2.10A {Rhodobacter sphaeroides 2}
Probab=96.88  E-value=0.0044  Score=38.93  Aligned_cols=17  Identities=24%  Similarity=0.425  Sum_probs=8.9

Q ss_pred             HHHHHHHCCCCCCCCCC
Q ss_conf             00001101234433222
Q gi|254780674|r  134 GIDLSSLSGSGPHGRIV  150 (423)
Q Consensus       134 giDl~~V~GTG~~GRIt  150 (423)
                      |.||+..-+-.++|..+
T Consensus       111 ~~nlNR~FPg~~~Gs~~  127 (354)
T 3cdx_A          111 GRDINRCFPGDPRGTFS  127 (354)
T ss_dssp             CCCGGGSTTCCTTSCHH
T ss_pred             CCCHHHHCCCCCCCCHH
T ss_conf             98888829999999989


No 53 
>3h9i_A Cation efflux system protein CUSB; three-helix bundle, beta barrel, copper, copper transport, ION transport, transport, transport protein; 3.40A {Escherichia coli k-12} PDB: 3h94_A 3h9t_B
Probab=96.86  E-value=0.00035  Score=46.21  Aligned_cols=55  Identities=13%  Similarity=0.344  Sum_probs=38.3

Q ss_pred             ECCCCEECCCCEEEEEECCC-CEEEEECCCCCEEEEEE-ECCCCCEEECCCEEEEEEC
Q ss_conf             16897852798599995265-31245368786899999-2488604035855999970
Q gi|254780674|r   25 KQEGDKISPGDILCEIETDK-AIMEFESVDEGIIDEIL-VPAGTENIAVNSPILNILM   80 (423)
Q Consensus        25 ~k~GD~V~~gd~l~eVETDK-a~~ev~S~~~G~l~~i~-v~eG~e~v~VG~~i~~i~~   80 (423)
                      ++.++....-...-.|+.|- -...|.++++|.+.+++ +.+| |.|+-|++|+.|..
T Consensus        99 v~~~~~~~~~~~~G~V~~d~~~~~~v~a~~~G~I~~l~v~~~G-d~VkkGq~L~~lds  155 (407)
T 3h9i_A           99 VTRGPLTFAQSFPANVSYNEYQYAIVQARAAGFIDKVYPLTVG-DKVQKGTPLLDLTI  155 (407)
T ss_dssp             CEEECCEEEEEEEEEEEECGGGCEEEEEESCCCCBCCCSCCSS-CEESTTCCCEEEEC
T ss_pred             EEEEEEEEEEEEEEEEEECCCEEEEEECCCCEEEEEEEECCCC-CEECCCCEEEEECC
T ss_conf             8986310599998999988760899965667799999506899-98858988999878


No 54 
>1k8m_A E2 component of branched-chain ahpha-ketoacid dehydrogenase; lipoyl acid bearing, human BCKD, experimental DATA, average structure, transferase; NMR {Homo sapiens} SCOP: b.84.1.1 PDB: 1k8o_A
Probab=96.36  E-value=0.0029  Score=40.07  Aligned_cols=31  Identities=19%  Similarity=0.292  Sum_probs=21.3

Q ss_pred             CCCEEEEEEECCCCCEEECCCEEEEEECCCCC
Q ss_conf             78689999924886040358559999707542
Q gi|254780674|r   53 DEGIIDEILVPAGTENIAVNSPILNILMDSTE   84 (423)
Q Consensus        53 ~~G~l~~i~v~eG~e~v~VG~~i~~i~~~~~~   84 (423)
                      .+|+|.+|++++| |.|..|++|+.++++...
T Consensus        17 ~~g~i~~w~v~~G-d~V~~Gd~l~~iEt~K~~   47 (93)
T 1k8m_A           17 REVTVKEWYVKEG-DTVSQFDSICEVQSDKAS   47 (93)
T ss_dssp             CCEEEEEECCCTT-CEECSSSCCEEEECSSCE
T ss_pred             CEEEEEEEEECCC-CEECCCCEEEEEECCCCE
T ss_conf             1599999990897-999889989999837728


No 55 
>1dcz_A Transcarboxylase 1.3S subunit; antiparallel beta sheet, hammerhead, biocytin, transferase; NMR {Propionibacterium freudenreichiisubsp} SCOP: b.84.1.1 PDB: 1dd2_A 1o78_A
Probab=95.52  E-value=0.015  Score=35.27  Aligned_cols=40  Identities=20%  Similarity=0.271  Sum_probs=34.1

Q ss_pred             CEEEEECCCCCEEEEEEECCCCCEEECCCEEEEEECCCCCC
Q ss_conf             31245368786899999248860403585599997075421
Q gi|254780674|r   45 AIMEFESVDEGIIDEILVPAGTENIAVNSPILNILMDSTEI   85 (423)
Q Consensus        45 a~~ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~~~~~   85 (423)
                      ...+|.||..|++.++++++| |.|+.|++|+.++..+-+.
T Consensus         7 ~~~~i~ap~~G~i~~~~V~~G-d~V~~Gq~l~~iEamK~~~   46 (77)
T 1dcz_A            7 GEGEIPAPLAGTVSKILVKEG-DTVKAGQTVLVLEAMKMET   46 (77)
T ss_dssp             CSSEEEBSSSCEEEEECCCTT-CEECTTSEEEEEEETTEEE
T ss_pred             CCCEEECCCCEEEEEEECCCC-CEECCCCEEEEEEECCCEE
T ss_conf             899698999959999983898-9986999899999435117


No 56 
>2kcc_A Acetyl-COA carboxylase 2; biotinoyl domain, BCCP, BIRA, biotinylation, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase; NMR {Homo sapiens}
Probab=95.52  E-value=0.011  Score=36.31  Aligned_cols=42  Identities=17%  Similarity=0.227  Sum_probs=35.2

Q ss_pred             ECCCCEEEEECCCCCEEEEEEECCCCCEEECCCEEEEEECCCCCC
Q ss_conf             526531245368786899999248860403585599997075421
Q gi|254780674|r   41 ETDKAIMEFESVDEGIIDEILVPAGTENIAVNSPILNILMDSTEI   85 (423)
Q Consensus        41 ETDKa~~ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~~~~~   85 (423)
                      |.|.  ..+.||..|+|.+|++++| |.|..|++|+.++..+...
T Consensus         2 e~dp--~~v~ap~~G~i~~~~V~~G-d~V~~G~~l~~iEa~K~~~   43 (84)
T 2kcc_A            2 ENDP--TVLRSPSAGKLTQYTVEDG-GHVEAGSSYAEMEVMKMIM   43 (84)
T ss_dssp             CCCT--TEECCSSSCCEEEESSCTT-EEECTTCEEEEEECSSCEE
T ss_pred             CCCC--CEEECCCCEEEEEEEECCC-CEECCCCEEEEEECCCEEE
T ss_conf             8899--8798898859999995798-9991798699998474478


No 57 
>2dn8_A Acetyl-COA carboxylase 2; biotin required enzyme, transcarboxylase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.45  E-value=0.017  Score=34.90  Aligned_cols=38  Identities=13%  Similarity=0.179  Sum_probs=33.6

Q ss_pred             EEEECCCCCEEEEEEECCCCCEEECCCEEEEEECCCCCC
Q ss_conf             245368786899999248860403585599997075421
Q gi|254780674|r   47 MEFESVDEGIIDEILVPAGTENIAVNSPILNILMDSTEI   85 (423)
Q Consensus        47 ~ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~~~~~   85 (423)
                      ..+.||..|+|.+|++++| |.|..|++|+.|+.++...
T Consensus        18 ~~v~ap~~G~i~~~~V~~G-d~V~~Gd~l~~iEt~K~~~   55 (100)
T 2dn8_A           18 TVLRSPSAGKLTQYTVEDG-GHVEAGSSYAEMEVMKMIM   55 (100)
T ss_dssp             TEEECSSCEEEEEESSCTT-EEECTTCEEEEEEETTEEE
T ss_pred             CEEECCCCEEEEEEEECCC-CEECCCCEEEEEECCCEEE
T ss_conf             8887899869999993798-9985899799998273268


No 58 
>2ejm_A Methylcrotonoyl-COA carboxylase subunit alpha; biotin-requiring enzyme, biotin, actyl COA carboxylase, fatty acid synthesis, structural genomics; NMR {Homo sapiens}
Probab=95.23  E-value=0.018  Score=34.86  Aligned_cols=43  Identities=14%  Similarity=0.249  Sum_probs=36.5

Q ss_pred             CCCCEEEEECCCCCEEEEEEECCCCCEEECCCEEEEEECCCCCC
Q ss_conf             26531245368786899999248860403585599997075421
Q gi|254780674|r   42 TDKAIMEFESVDEGIIDEILVPAGTENIAVNSPILNILMDSTEI   85 (423)
Q Consensus        42 TDKa~~ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~~~~~   85 (423)
                      ++...-.+.||..|+|.+|++++| |.|..|++|+.|+..+...
T Consensus        10 ~~~~~~~~~aPm~G~i~~~~v~~G-d~V~~g~~l~~vEt~K~~~   52 (99)
T 2ejm_A           10 SQETQGGPLAPMTGTIEKVFVKAG-DKVKAGDSLMVMIAMKMEH   52 (99)
T ss_dssp             SCSCCSSCBCSSSEEEEEECCCTT-EEECSSCEEEEEESSSSEE
T ss_pred             CCCCCCCEECCCCEEEEEEECCCC-CEECCCCEEEEEECCCCCE
T ss_conf             656789233889969999982898-9986899899997376237


No 59 
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport protein; 2.71A {Escherichia coli}
Probab=95.19  E-value=0.0083  Score=37.05  Aligned_cols=36  Identities=22%  Similarity=0.211  Sum_probs=31.2

Q ss_pred             CEEEEECCCCCEEEEEEECCCCCEEECCCEEEEEECC
Q ss_conf             3124536878689999924886040358559999707
Q gi|254780674|r   45 AIMEFESVDEGIIDEILVPAGTENIAVNSPILNILMD   81 (423)
Q Consensus        45 a~~ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~   81 (423)
                      -.++|-|+.+|+|.++++++| +.|+-|++|+.|+..
T Consensus        21 ~~v~I~a~v~G~V~~i~v~~G-~~VkkG~~L~~ld~~   56 (277)
T 2f1m_A           21 RIAEVRPQVSGIILKRNFKEG-SDIEAGVSLYQIDPA   56 (277)
T ss_dssp             EEEEECCSSCEEEEEECSCTT-CEECTTSCSEEECCH
T ss_pred             EEEEEEEECCEEEEEEECCCC-CEECCCCEEEEECCH
T ss_conf             999999545789999987993-998899999998858


No 60 
>1bdo_A Acetyl-COA carboxylase; BCCPSC, carboxyl transferase, fatty acid biosynthesis, hammerhead structure, selenomethionine, ligase; HET: BTN; 1.80A {Escherichia coli} SCOP: b.84.1.1 PDB: 2bdo_A* 1a6x_A 3bdo_A
Probab=95.09  E-value=0.015  Score=35.25  Aligned_cols=36  Identities=11%  Similarity=0.132  Sum_probs=21.7

Q ss_pred             EEECCCCCEE-------EEEEECCCCCEEECCCEEEEEECCCCC
Q ss_conf             4536878689-------999924886040358559999707542
Q gi|254780674|r   48 EFESVDEGII-------DEILVPAGTENIAVNSPILNILMDSTE   84 (423)
Q Consensus        48 ev~S~~~G~l-------~~i~v~eG~e~v~VG~~i~~i~~~~~~   84 (423)
                      .|.||..|++       .++++++| |.|..|++++.++..+-.
T Consensus         6 ~V~aPm~G~~~~~~~p~~~~~V~~G-d~V~~g~~l~~iEamK~~   48 (80)
T 1bdo_A            6 IVRSPMVGTFYRTPSPDAKAFIEVG-QKVNVGDTLCIVEAMKMM   48 (80)
T ss_dssp             EEECSSSEEEESSSSTTSCCSCCTT-CEECTTCEEEEEEETTEE
T ss_pred             EEECCCCEEEEECCCCCCCCEECCC-CEEECCCEEEEEEECCCH
T ss_conf             9858987799814699998532689-999668789999976201


No 61 
>2d5d_A Methylmalonyl-COA decarboxylase gamma chain; biotin, domain, BCCP, X-RAY diffraction, structural genomics, NPPSFA; 1.55A {Pyrococcus horikoshii OT3} PDB: 2ejf_C* 2ejg_C* 2evb_A
Probab=94.98  E-value=0.024  Score=34.02  Aligned_cols=38  Identities=18%  Similarity=0.190  Sum_probs=33.2

Q ss_pred             EEEECCCCCEEEEEEECCCCCEEECCCEEEEEECCCCCC
Q ss_conf             245368786899999248860403585599997075421
Q gi|254780674|r   47 MEFESVDEGIIDEILVPAGTENIAVNSPILNILMDSTEI   85 (423)
Q Consensus        47 ~ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~~~~~   85 (423)
                      .-|.||..|++.++++++| |.|+.|++|+.++.++...
T Consensus         6 ~~v~ap~~G~v~~~~v~~G-d~V~~g~~l~~iE~~K~~~   43 (74)
T 2d5d_A            6 NVVSAPMPGKVLRVLVRVG-DRVRVGQGLLVLEAMKMEN   43 (74)
T ss_dssp             CEEECSSCEEEEEECCCTT-CEECTTCEEEEEEETTEEE
T ss_pred             CEEECCCCCEEEEEECCCC-CEEECCCEEEEEEECCCEE
T ss_conf             9997999979999994899-9993898899999356126


No 62 
>1iyu_A E2P, dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1iyv_A
Probab=94.93  E-value=0.014  Score=35.59  Aligned_cols=32  Identities=22%  Similarity=0.388  Sum_probs=25.7

Q ss_pred             CCCEEEEEEECCCCCEEECCCEEEEEECCCCCC
Q ss_conf             786899999248860403585599997075421
Q gi|254780674|r   53 DEGIIDEILVPAGTENIAVNSPILNILMDSTEI   85 (423)
Q Consensus        53 ~~G~l~~i~v~eG~e~v~VG~~i~~i~~~~~~~   85 (423)
                      .+|+|.+|++++| |.|..|++|+.++..+...
T Consensus        11 ~~g~i~~~~v~~G-d~V~~G~~l~~iE~~K~~~   42 (79)
T 1iyu_A           11 GDGEVIELLVKTG-DLIEVEQGLVVLESAKASM   42 (79)
T ss_dssp             SEEEEEEECCCTT-CBCCSSSEEEEEECSSCEE
T ss_pred             CCEEEEEEECCCC-CEECCCCEEEEEEECCCEE
T ss_conf             9689999982797-9990899899999567158


No 63 
>1z6h_A Biotin/lipoyl attachment protein; solution structure, biosynthetic protein; HET: BTI; NMR {Bacillus subtilis} PDB: 1z7t_A 2b8f_A 2b8g_A*
Probab=94.76  E-value=0.029  Score=33.39  Aligned_cols=35  Identities=17%  Similarity=0.128  Sum_probs=31.1

Q ss_pred             EECCCCCEEEEEEECCCCCEEECCCEEEEEECCCCC
Q ss_conf             536878689999924886040358559999707542
Q gi|254780674|r   49 FESVDEGIIDEILVPAGTENIAVNSPILNILMDSTE   84 (423)
Q Consensus        49 v~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~~~~   84 (423)
                      |.||..|+|.+|++++| |.|..|++|+.++..+..
T Consensus         2 v~~~m~G~i~~~~v~~G-d~V~~g~~l~~ie~~K~~   36 (72)
T 1z6h_A            2 VSIQMAGNLWKVHVKAG-DQIEKGQEVAILESMKME   36 (72)
T ss_dssp             EECCSSEEEEEECCCTT-CEECTTCEEEEEEETTEE
T ss_pred             EECCCCEEEEEEECCCC-CEECCCCEEEEEECCCCC
T ss_conf             80538789999992798-999079899999817655


No 64 
>1qjo_A Dihydrolipoamide acetyltransferase; lipoyl domain, pyruvate dehydrogenase; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=94.69  E-value=0.015  Score=35.37  Aligned_cols=32  Identities=22%  Similarity=0.480  Sum_probs=25.1

Q ss_pred             CCCEEEEEEECCCCCEEECCCEEEEEECCCCCC
Q ss_conf             786899999248860403585599997075421
Q gi|254780674|r   53 DEGIIDEILVPAGTENIAVNSPILNILMDSTEI   85 (423)
Q Consensus        53 ~~G~l~~i~v~eG~e~v~VG~~i~~i~~~~~~~   85 (423)
                      .++++.+|++++| |.|..|++++.+++++...
T Consensus        13 ~~~~i~~~~v~~G-d~V~~g~~l~~iEt~K~~~   44 (80)
T 1qjo_A           13 DEVEVTEVMVKVG-DKVAAEQSLITVEGDKASM   44 (80)
T ss_dssp             SCEEEEECCCCTT-CEECBTSEEEEEESSSSCE
T ss_pred             CEEEEEEEEECCC-CEECCCCEEEEEEECCCCE
T ss_conf             7289999991797-9998999899999075451


No 65 
>1vf7_A Multidrug resistance protein MEXA; alpha hairpin, beta barrel, membrane protein; 2.40A {Pseudomonas aeruginosa} SCOP: f.46.1.1 PDB: 2v4d_A 1t5e_A
Probab=94.63  E-value=0.014  Score=35.58  Aligned_cols=54  Identities=15%  Similarity=0.126  Sum_probs=37.4

Q ss_pred             ECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEECCCEEEEEEC
Q ss_conf             16897852798599995265312453687868999992488604035855999970
Q gi|254780674|r   25 KQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEILVPAGTENIAVNSPILNILM   80 (423)
Q Consensus        25 ~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~   80 (423)
                      ++.|+.-..-+.--.|+.+ -..+|.++.+|+|.++++++| +.|+-|++|+.|+.
T Consensus        23 v~~~~~~~~~~~~G~v~~~-~~~~v~~~v~G~V~~v~V~~G-d~VkkGd~L~~ld~   76 (369)
T 1vf7_A           23 LEAQTVTLNTELPGRTNAF-RIAEVRPQVNGIILKRLFKEG-SDVKAGQQLYQIDP   76 (369)
T ss_dssp             ------CCEEEEEEECEES-CEEEECCSSCEEEEECCSCSS-EEECTTSEEEEECC
T ss_pred             EEEEEEEEEEEEEEEEEEE-EEEEEEEECCEEEEEEECCCC-CEECCCCEEEEECC
T ss_conf             8786214799999999970-899999545789999988995-99889998999886


No 66 
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=94.55  E-value=0.025  Score=33.86  Aligned_cols=54  Identities=11%  Similarity=0.132  Sum_probs=38.0

Q ss_pred             CCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEECCCEEEEEECC
Q ss_conf             68978527985999952653124536878689999924886040358559999707
Q gi|254780674|r   26 QEGDKISPGDILCEIETDKAIMEFESVDEGIIDEILVPAGTENIAVNSPILNILMD   81 (423)
Q Consensus        26 k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~   81 (423)
                      +.||--..=..-..|+..+ ...|.++.+|+|.++++++| +.|+.|++|+.|+..
T Consensus        12 ~~g~i~~tv~~~G~v~~~~-~~~v~a~~~G~V~~v~v~~G-~~V~~G~~L~~id~~   65 (341)
T 3fpp_A           12 RPGDLQQSVLATGKLDALR-KVDVGAQVSGQLKTLSVAIG-DKVKKDQLLGVIDPE   65 (341)
T ss_dssp             -CCCCCCEEEEEEEEEESS-EEECCCSSCEEEEEECCCTT-CEECTTCEEEEECCH
T ss_pred             EEEEEEEEEEEEEEEEEEE-EEEEECCCCEEEEEEECCCC-CEECCCCEEEEECHH
T ss_conf             9987249999999999808-99998447789999998991-998899989998819


No 67 
>2k7v_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; misfolded dimer, acyltransferase, glycolysis; NMR {Escherichia coli}
Probab=94.41  E-value=0.01  Score=36.46  Aligned_cols=36  Identities=19%  Similarity=0.348  Sum_probs=20.4

Q ss_pred             EEEECCCCCEEEEEEECCCCCEEECCCEEEEEECCCC
Q ss_conf             2453687868999992488604035855999970754
Q gi|254780674|r   47 MEFESVDEGIIDEILVPAGTENIAVNSPILNILMDST   83 (423)
Q Consensus        47 ~ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~~~   83 (423)
                      .+|-+|..|.|.+|++++| |.|..|++|+.++.+..
T Consensus         3 ~~v~~P~~~~I~~~~v~~G-d~V~~gd~l~~iE~~K~   38 (85)
T 2k7v_A            3 KEVNVPDIVEVTEVMVKVG-DKVAAEQSLITVEGDKA   38 (85)
T ss_dssp             SCCCCCSCCCCCSCCCSSS-CCCCCSSSCCCCSCCCS
T ss_pred             CEEECCCCEEEEEEEECCC-CEECCCCEEEEEECCCC
T ss_conf             3797999788989992799-99917998999981883


No 68 
>1ghj_A E2, E2, the dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase...; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1ghk_A
Probab=93.80  E-value=0.043  Score=32.27  Aligned_cols=35  Identities=20%  Similarity=0.334  Sum_probs=28.0

Q ss_pred             CCCCCEEEEEEECCCCCEEECCCEEEEEECCCCCCC
Q ss_conf             687868999992488604035855999970754211
Q gi|254780674|r   51 SVDEGIIDEILVPAGTENIAVNSPILNILMDSTEIP   86 (423)
Q Consensus        51 S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~~~~~~   86 (423)
                      +..+|+|.+|++++| |.|..|++|+.+++++....
T Consensus        12 ~~~eg~i~~w~v~~G-d~V~~gd~l~~vEtdK~~~e   46 (79)
T 1ghj_A           12 SIADGTVATWHKKPG-EAVKRDELIVDIETDKVVME   46 (79)
T ss_dssp             SCSCEEECCCSSCTT-SEECSSCEEEEEECSSCEEE
T ss_pred             CCCEEEEEEEECCCC-CEEECCCEEEEEECCCEEEE
T ss_conf             864699999992798-99908998999995865899


No 69 
>2jku_A Propionyl-COA carboxylase alpha chain, mitochondrial; ligase, biotin, ATP-binding, disease mutation, nucleotide-binding, mitochondrion; HET: PG4; 1.5A {Homo sapiens}
Probab=93.56  E-value=0.034  Score=32.98  Aligned_cols=37  Identities=19%  Similarity=0.185  Sum_probs=32.5

Q ss_pred             EEECCCCCEEEEEEECCCCCEEECCCEEEEEECCCCCC
Q ss_conf             45368786899999248860403585599997075421
Q gi|254780674|r   48 EFESVDEGIIDEILVPAGTENIAVNSPILNILMDSTEI   85 (423)
Q Consensus        48 ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~~~~~   85 (423)
                      -+.||..|++.++++++| |.|..|++++.++..+...
T Consensus        27 ~i~aP~~G~V~~i~V~~G-d~V~~G~~l~~iEsmK~~~   63 (94)
T 2jku_A           27 VLRSPMPGVVVAVSVKPG-DAVAEGQEICVIEAMKMQN   63 (94)
T ss_dssp             CCCCSSSCEEEEECCCTT-CCCCTTCCCEEEEC-----
T ss_pred             EEECCCCCEEEEEECCCC-CEECCCCEEEEEECCCCCE
T ss_conf             898999968989981899-9995898799998036538


No 70 
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=93.17  E-value=0.1  Score=29.73  Aligned_cols=31  Identities=26%  Similarity=0.395  Sum_probs=27.1

Q ss_pred             EEEEEEEEEECCCCEECCCCEEEEEECCCCE
Q ss_conf             1799999981689785279859999526531
Q gi|254780674|r   16 TEGKLAKWIKQEGDKISPGDILCEIETDKAI   46 (423)
Q Consensus        16 ~egtI~~Wl~k~GD~V~~gd~l~eVETDKa~   46 (423)
                      ..|+|.++++++||.|++||+|+++.+....
T Consensus        38 ~~G~V~~v~v~~G~~V~~G~~L~~id~~~~~   68 (341)
T 3fpp_A           38 VSGQLKTLSVAIGDKVKKDQLLGVIDPEQAE   68 (341)
T ss_dssp             SCEEEEEECCCTTCEECTTCEEEEECCHHHH
T ss_pred             CCEEEEEEECCCCCEECCCCEEEEECHHHHH
T ss_conf             7789999998991998899989998819999


No 71 
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 3hb9_A*
Probab=92.55  E-value=0.15  Score=28.65  Aligned_cols=44  Identities=23%  Similarity=0.348  Sum_probs=0.0

Q ss_pred             EEECCCCCEEEEEEECCCCCEEECCCEEEEEECCCCCCCCCCCCC
Q ss_conf             453687868999992488604035855999970754211111222
Q gi|254780674|r   48 EFESVDEGIIDEILVPAGTENIAVNSPILNILMDSTEIPPSPPLS   92 (423)
Q Consensus        48 ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~~~~~~~~~~~~   92 (423)
                      .|+||..|.+-|++|++| |.|+.|++|++|+.=+-+.+-..+..
T Consensus      1079 ~V~Ap~~GnVwkv~V~~G-d~V~~Gd~l~IlEAMKME~~V~Ap~~ 1122 (1150)
T 3hbl_A         1079 HIGAQMPGSVTEVKVSVG-ETVKANQPLLITEAMKMETTIQAPFD 1122 (1150)
T ss_dssp             EEECSSSEEEEEECCCTT-CEECTTCEEEEEESSSCEEEEECSSS
T ss_pred             EEECCCCEEEEEEEECCC-CEECCCCEEEEEEHHCCCCCCCCCCC
T ss_conf             770689847899980899-99799998999965208671538999


No 72 
>2k32_A A; NMR {Campylobacter jejuni} PDB: 2k33_A*
Probab=92.50  E-value=0.13  Score=29.04  Aligned_cols=34  Identities=21%  Similarity=0.310  Sum_probs=30.5

Q ss_pred             EEEECCCCCEEEEEEECCCCCEEECCCEEEEEECC
Q ss_conf             24536878689999924886040358559999707
Q gi|254780674|r   47 MEFESVDEGIIDEILVPAGTENIAVNSPILNILMD   81 (423)
Q Consensus        47 ~ev~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~   81 (423)
                      +.|-+..+|+|.++++++| +.|+-|++|+.|+.+
T Consensus         2 V~i~~~v~G~V~~i~v~eG-~~V~kGq~L~~ld~~   35 (116)
T 2k32_A            2 VIIKPQVSGVIVNKLFKAG-DKVKKGQTLFIIEQD   35 (116)
T ss_dssp             EEECCSSCEEEEEECSCTT-SEECTTCEEEEEECT
T ss_pred             CEEECCCCEEEEEEECCCC-CEECCCCEEEEEECH
T ss_conf             3896757889999988898-998899899987621


No 73 
>2dnc_A Pyruvate dehydrogenase protein X component; lipoic acid, lipoyl domain, 2-oxoacid dehydrogenase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.39  E-value=0.068  Score=30.96  Aligned_cols=33  Identities=24%  Similarity=0.392  Sum_probs=28.5

Q ss_pred             CCCCEEEEEEECCCCCEEECCCEEEEEECCCCCC
Q ss_conf             8786899999248860403585599997075421
Q gi|254780674|r   52 VDEGIIDEILVPAGTENIAVNSPILNILMDSTEI   85 (423)
Q Consensus        52 ~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~~~~~   85 (423)
                      -.+|+|.+|++++| |.|..|++|+.+++++...
T Consensus        19 ~~eg~i~~W~v~~G-d~V~~gd~l~evEtdK~~~   51 (98)
T 2dnc_A           19 MEEGNIVKWLKKEG-EAVSAGDALCEIETDKAVV   51 (98)
T ss_dssp             CSEECEEEESSCTT-CEECTTSEEEEEECSSCEE
T ss_pred             CCEEEEEEEEECCC-CEEECCCEEEEEECCCEEE
T ss_conf             43799999990899-9993899899998583899


No 74 
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA SAP; 2.00A {Rhizobium etli cfn 42}
Probab=92.23  E-value=0.056  Score=31.49  Aligned_cols=42  Identities=7%  Similarity=-0.012  Sum_probs=17.9

Q ss_pred             EEEEEEEEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEEEEEEC
Q ss_conf             79999998168978527985999952653124536878689999924
Q gi|254780674|r   17 EGKLAKWIKQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEILVP   63 (423)
Q Consensus        17 egtI~~Wl~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~~i~v~   63 (423)
                      -|+|.+|.--.|.-|..|.-+.     -.-.+|++.+|--|.|+.+-
T Consensus       378 ~g~~~~~~~~~~~~~r~d~~~~-----~~g~~~~~~~d~~~~k~~~~  419 (1165)
T 2qf7_A          378 YGRITAYRSASGFGIRLDGGTS-----YSGAIITRYYDPLLVKVTAW  419 (1165)
T ss_dssp             CEECCEEECCCCTTEEEECCSC-----CTTCEECSSSCCEEEEEEEE
T ss_pred             CCCCEEEECCCCCCEEECCCCC-----CCCCEECCCCCCHHHEEEEE
T ss_conf             7644288789999789810352-----69985477785042235687


No 75 
>1y8o_B Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: LPA ADP; 2.48A {Homo sapiens} SCOP: b.84.1.1 PDB: 1y8n_B* 1y8p_B* 2pnr_C* 2q8i_B* 1fyc_A
Probab=92.18  E-value=0.1  Score=29.77  Aligned_cols=34  Identities=18%  Similarity=0.283  Sum_probs=29.0

Q ss_pred             CCCCCEEEEEEECCCCCEEECCCEEEEEECCCCCC
Q ss_conf             68786899999248860403585599997075421
Q gi|254780674|r   51 SVDEGIIDEILVPAGTENIAVNSPILNILMDSTEI   85 (423)
Q Consensus        51 S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~~~~~   85 (423)
                      +-..|+|.+|++++| |.|..|++|+.+++++...
T Consensus        38 ~~~Eg~I~~W~vk~G-D~V~~gd~L~evETDKa~~   71 (128)
T 1y8o_B           38 TMTMGTVQRWEKKVG-EKLSEGDLLAEIETDKATI   71 (128)
T ss_dssp             TCSEEEEEEECSCTT-CEECTTCEEEEEECSSCEE
T ss_pred             CCCEEEEEEEEECCC-CEEECCCEEEEEECCCEEE
T ss_conf             831799989995799-9980899799998286579


No 76 
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport protein; 2.71A {Escherichia coli}
Probab=92.10  E-value=0.078  Score=30.56  Aligned_cols=29  Identities=28%  Similarity=0.377  Sum_probs=25.9

Q ss_pred             EEEEEEEEEECCCCEECCCCEEEEEECCC
Q ss_conf             17999999816897852798599995265
Q gi|254780674|r   16 TEGKLAKWIKQEGDKISPGDILCEIETDK   44 (423)
Q Consensus        16 ~egtI~~Wl~k~GD~V~~gd~l~eVETDK   44 (423)
                      ..|.|.+|++++||.|++||+|+++.+..
T Consensus        29 v~G~V~~i~v~~G~~VkkG~~L~~ld~~~   57 (277)
T 2f1m_A           29 VSGIILKRNFKEGSDIEAGVSLYQIDPAT   57 (277)
T ss_dssp             SCEEEEEECSCTTCEECTTSCSEEECCHH
T ss_pred             CCEEEEEEECCCCCEECCCCEEEEECCHH
T ss_conf             57899999879939988999999988589


No 77 
>3lnn_A Membrane fusion protein (MFP-RND) heavy metal CAT tricomponent efflux HMXB (CZCB-LIKE)...; structural genomics, PSI-2; 2.80A {Cupriavidus metallidurans}
Probab=92.08  E-value=0.22  Score=27.53  Aligned_cols=28  Identities=32%  Similarity=0.620  Sum_probs=25.7

Q ss_pred             EEEEEEEEEECCCCEECCCCEEEEEECC
Q ss_conf             1799999981689785279859999526
Q gi|254780674|r   16 TEGKLAKWIKQEGDKISPGDILCEIETD   43 (423)
Q Consensus        16 ~egtI~~Wl~k~GD~V~~gd~l~eVETD   43 (423)
                      ..|+|.+|++++||.|++||+|+++++.
T Consensus        64 v~G~V~~i~v~~G~~V~kGq~L~~id~~   91 (359)
T 3lnn_A           64 LAGRIVSLNKQLGDEVKAGDVLFTIDSA   91 (359)
T ss_dssp             SCEEEEECCSCTTCEECTTCEEEEEECS
T ss_pred             CCEEEEEEECCCCCEECCCCEEEEECHH
T ss_conf             7789999998991998899989999859


No 78 
>2dne_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; lipoyl domain, lipoic acid, 2-oxoacid dehydrogenase; NMR {Homo sapiens}
Probab=91.84  E-value=0.086  Score=30.26  Aligned_cols=34  Identities=18%  Similarity=0.291  Sum_probs=29.0

Q ss_pred             CCCCCEEEEEEECCCCCEEECCCEEEEEECCCCCC
Q ss_conf             68786899999248860403585599997075421
Q gi|254780674|r   51 SVDEGIIDEILVPAGTENIAVNSPILNILMDSTEI   85 (423)
Q Consensus        51 S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~~~~~   85 (423)
                      +-.+|+|.+|++++| |.|..|++|+.+++++...
T Consensus        18 ~~~eg~i~~W~v~~G-d~V~~gd~l~evETdKa~~   51 (108)
T 2dne_A           18 TMQAGTIARWEKKEG-DKINEGDLIAEVETDKATV   51 (108)
T ss_dssp             SCCEEEEEECSSCTT-CEECTTSEEEEEECSSCEE
T ss_pred             CCCEEEEEEEEECCC-CEEECCCEEEEEECCCEEE
T ss_conf             865699989993699-9980799899998385768


No 79 
>1gjx_A Pyruvate dehydrogenase; oxidoreductase, lipoyl domain, dihydrolipoyl dehydrogenase, multienzyme complex, post-translational modification; NMR {Neisseria meningitidis} SCOP: b.84.1.1
Probab=91.80  E-value=0.016  Score=35.08  Aligned_cols=33  Identities=21%  Similarity=0.338  Sum_probs=27.8

Q ss_pred             CCCCEEEEEEECCCCCEEECCCEEEEEECCCCCC
Q ss_conf             8786899999248860403585599997075421
Q gi|254780674|r   52 VDEGIIDEILVPAGTENIAVNSPILNILMDSTEI   85 (423)
Q Consensus        52 ~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~~~~~   85 (423)
                      ..++++.+|++++| |.|..|++|+.+++++...
T Consensus        13 ~~~~~I~~~~v~~G-d~V~~Gd~l~~iEt~K~~~   45 (81)
T 1gjx_A           13 HENVDIIAVEVNVG-DTIAVDDTLITLETDKATM   45 (81)
T ss_dssp             CSSEEEEEECCCSS-CBCCSSCCCEEEECSSCEE
T ss_pred             CCEEEEEEEECCCC-CEEECCCEEEEEEECCCEE
T ss_conf             74899999982897-9990899899999388379


No 80 
>3crk_C Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; pyruvate dehydrogenase kinase isozyme 2, glucose metabolism; HET: LA2; 2.30A {Homo sapiens} PDB: 3crl_C*
Probab=91.77  E-value=0.12  Score=29.29  Aligned_cols=32  Identities=19%  Similarity=0.267  Sum_probs=28.3

Q ss_pred             CCCEEEEEEECCCCCEEECCCEEEEEECCCCCC
Q ss_conf             786899999248860403585599997075421
Q gi|254780674|r   53 DEGIIDEILVPAGTENIAVNSPILNILMDSTEI   85 (423)
Q Consensus        53 ~~G~l~~i~v~eG~e~v~VG~~i~~i~~~~~~~   85 (423)
                      .+|+|.+|++++| |.|..|++|+.+++++...
T Consensus        18 ~eg~i~~W~v~~G-d~V~~gd~l~evEtdK~~~   49 (87)
T 3crk_C           18 TMGTVQRWEKKVG-EKLSEGDLLAEIETDXATI   49 (87)
T ss_dssp             CEEEEEEECSCTT-CEECTTCEEEEEECSSCEE
T ss_pred             CEEEEEEEECCCC-CEEECCCEEEEEEECCEEE
T ss_conf             5799999863999-9997899799999077888


No 81 
>2gpr_A Glucose-permease IIA component; phosphotransferase, enzyme IIA; 2.50A {Mycoplasma capricolum} SCOP: b.84.3.1
Probab=91.52  E-value=0.19  Score=27.92  Aligned_cols=34  Identities=9%  Similarity=-0.043  Sum_probs=19.3

Q ss_pred             EEEECCCCCEEEEEEECCCCCE---EECCCEEEEEECC
Q ss_conf             2453687868999992488604---0358559999707
Q gi|254780674|r   47 MEFESVDEGIIDEILVPAGTEN---IAVNSPILNILMD   81 (423)
Q Consensus        47 ~ev~S~~~G~l~~i~v~eG~e~---v~VG~~i~~i~~~   81 (423)
                      .+|-||++|.+..+ -+.-|++   =-.|+-++++-.+
T Consensus         8 ~~i~APv~G~vi~l-~~V~D~vFs~k~mG~G~aI~P~~   44 (154)
T 2gpr_A            8 LKVLAPCDGTIITL-DEVEDEVFKERMLGDGFAINPKS   44 (154)
T ss_dssp             EEEECSSSEEEECG-GGSSCHHHHTTSSCEEEEEEESS
T ss_pred             EEEEECCCCEEEEC-CCCCCHHHCCCCCCCEEEEECCC
T ss_conf             09996477389881-32867363568801629999279


No 82 
>1vf7_A Multidrug resistance protein MEXA; alpha hairpin, beta barrel, membrane protein; 2.40A {Pseudomonas aeruginosa} SCOP: f.46.1.1 PDB: 2v4d_A 1t5e_A
Probab=90.68  E-value=0.14  Score=28.79  Aligned_cols=28  Identities=25%  Similarity=0.496  Sum_probs=25.0

Q ss_pred             EEEEEEEEEECCCCEECCCCEEEEEECC
Q ss_conf             1799999981689785279859999526
Q gi|254780674|r   16 TEGKLAKWIKQEGDKISPGDILCEIETD   43 (423)
Q Consensus        16 ~egtI~~Wl~k~GD~V~~gd~l~eVETD   43 (423)
                      ..|+|.+|++++||.|++||+|+++.+.
T Consensus        50 v~G~V~~v~V~~Gd~VkkGd~L~~ld~~   77 (369)
T 1vf7_A           50 VNGIILKRLFKEGSDVKAGQQLYQIDPA   77 (369)
T ss_dssp             SCEEEEECCSCSSEEECTTSEEEEECCH
T ss_pred             CCEEEEEEECCCCCEECCCCEEEEECCH
T ss_conf             5789999988995998899989998868


No 83 
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=90.57  E-value=0.039  Score=32.53  Aligned_cols=28  Identities=21%  Similarity=0.411  Sum_probs=14.3

Q ss_pred             EEEEEEEEEECCCCEECCCCEEEEEECC
Q ss_conf             1799999981689785279859999526
Q gi|254780674|r   16 TEGKLAKWIKQEGDKISPGDILCEIETD   43 (423)
Q Consensus        16 ~egtI~~Wl~k~GD~V~~gd~l~eVETD   43 (423)
                      .+|+|.+|++++||.|..|++|+.|+++
T Consensus        52 ~~G~l~~i~~~~G~~v~vG~~i~~i~~~   79 (428)
T 3dva_I           52 VKGKVLEILVPEGTVATVGQTLITLDAP   79 (428)
T ss_dssp             ----------------------------
T ss_pred             CCEEEEEEEECCCCEEECCCEEEEEECC
T ss_conf             9979999984899998079989999557


No 84 
>1zy8_K Pyruvate dehydrogenase protein X component, mitochondrial; human, dihydrolipoamide dehydrogenase, dihydrolipoyl dehydrogenase; HET: FAD; 2.59A {Homo sapiens}
Probab=90.04  E-value=0.046  Score=32.05  Aligned_cols=35  Identities=23%  Similarity=0.379  Sum_probs=30.0

Q ss_pred             ECCCCCEEEEEEECCCCCEEECCCEEEEEECCCCCC
Q ss_conf             368786899999248860403585599997075421
Q gi|254780674|r   50 ESVDEGIIDEILVPAGTENIAVNSPILNILMDSTEI   85 (423)
Q Consensus        50 ~S~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~~~~~   85 (423)
                      ++-.+|+|.+|++++| |.|..|++|+.|++|+...
T Consensus        13 e~~~eg~I~~Wlvk~G-D~V~~gd~L~evETDKa~~   47 (229)
T 1zy8_K           13 PTMEEGNIVKWLKKEG-EAVSAGDALCEIETDKAVV   47 (229)
T ss_dssp             ------------------------------------
T ss_pred             CCCCEEEEEEEEECCC-CEECCCCEEEEEEECCEEE
T ss_conf             9862699989981899-9977999799999286689


No 85 
>3d4r_A Domain of unknown function from the PFAM-B_34464; structural genomics, joint center for structural genomics; HET: MSE; 2.20A {Methanococcus maripaludis}
Probab=88.92  E-value=0.55  Score=24.86  Aligned_cols=41  Identities=22%  Similarity=0.177  Sum_probs=22.8

Q ss_pred             EEEEEEEECCCCEECCCCEEEEEECCCCEEE-EECCCCCEEE
Q ss_conf             9999998168978527985999952653124-5368786899
Q gi|254780674|r   18 GKLAKWIKQEGDKISPGDILCEIETDKAIME-FESVDEGIID   58 (423)
Q Consensus        18 gtI~~Wl~k~GD~V~~gd~l~eVETDKa~~e-v~S~~~G~l~   58 (423)
                      |--+--.+.+||.|.+||.|+-|.|-|-.+- +-||++|++.
T Consensus       109 G~~v~~i~~~G~rV~~gd~lA~i~T~KGEVR~i~spv~G~Vv  150 (169)
T 3d4r_A          109 GYKVYPIMDFGFRVLKGYRLATLESKKGDLRYVNSPVSGTVI  150 (169)
T ss_dssp             SSEEEECCCCSEEECTTCEEEEEECTTCCEEEEECSSSEEEE
T ss_pred             CEEEEEECCCCCEECCCCEEEEEEECCCCEEEECCCCCEEEE
T ss_conf             569999757553761487279998268507994499857999


No 86 
>1ax3_A Iiaglc, glucose permease IIA domain; phosphotransferase system, sugar transport, transferase, phosphorylation, transmembrane; NMR {Bacillus subtilis} SCOP: b.84.3.1 PDB: 1gpr_A
Probab=87.06  E-value=0.57  Score=24.75  Aligned_cols=36  Identities=11%  Similarity=0.093  Sum_probs=19.8

Q ss_pred             CEEEEECCCCCEEEEEEECCCCCEE----ECCCEEEEEECCC
Q ss_conf             3124536878689999924886040----3585599997075
Q gi|254780674|r   45 AIMEFESVDEGIIDEILVPAGTENI----AVNSPILNILMDS   82 (423)
Q Consensus        45 a~~ev~S~~~G~l~~i~v~eG~e~v----~VG~~i~~i~~~~   82 (423)
                      ..-.+-||++|.+.. +-+.. |.+    -.|+-++++-.++
T Consensus        11 ~~~~i~aPv~G~vi~-L~~V~-D~vFs~~~mG~G~aI~P~~~   50 (162)
T 1ax3_A           11 GEEVFVSPITGEIHP-ITDVP-DQVFSGKMMGDGFAILPSEG   50 (162)
T ss_dssp             CCSSCCCCCSEEEEE-GGGSS-SHHHHTCTTSEEEEEEECSS
T ss_pred             CCEEEEECCCCEEEE-CCCCC-CHHHCCCCCCCCEEEECCCC
T ss_conf             975999348868988-23197-74634678027489982799


No 87 
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=86.44  E-value=0.42  Score=25.66  Aligned_cols=52  Identities=21%  Similarity=0.178  Sum_probs=25.2

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCEE
Q ss_conf             45547989999987666543102334610037723898515321422101311588716898446312
Q gi|254780674|r  306 QADQKSILDISLEVKQLAQRAKQRKLKPEEYQGGTTSISNMGMLGINSFCAVINPPQSTILAIGAGEK  373 (423)
Q Consensus       306 ~ad~~~l~~i~~~~~~l~~~ar~~~l~~~d~~ggtftiSNlG~~g~~~~~pii~~pq~aILgvG~~~~  373 (423)
                      -.|++++.++.+.++...     ++.. =+-+| .++..|+-.|.-..         +=++++|+...
T Consensus       256 mLDn~s~e~lk~aV~~~~-----~~v~-lEaSG-GI~~~ni~~yA~tG---------VD~IsvGalt~  307 (320)
T 3paj_A          256 MLDNFSLEMMREAVKINA-----GRAA-LENSG-NITLDNLKECAETG---------VDYISVGALTK  307 (320)
T ss_dssp             EEESCCHHHHHHHHHHHT-----TSSE-EEEES-SCCHHHHHHHHTTT---------CSEEECTHHHH
T ss_pred             EECCCCHHHHHHHHHHHC-----CCEE-EEEEC-CCCHHHHHHHHHCC---------CCEEECCHHHC
T ss_conf             865899999999999758-----9779-99978-99899999999819---------89998797666


No 88 
>1f3z_A EIIA-GLC, glucose-specific phosphocarrier; phosphotransferase, signal transduction, sugar transport; 1.98A {Escherichia coli} SCOP: b.84.3.1 PDB: 1f3g_A 1ggr_A 1gla_F 1glb_F* 1glc_F* 1gld_F* 1gle_F* 1o2f_A 2f3g_A
Probab=84.01  E-value=0.56  Score=24.83  Aligned_cols=38  Identities=16%  Similarity=-0.020  Sum_probs=23.0

Q ss_pred             CCEEEEECCCCCEEEEEEECCCCCE---EECCCEEEEEECCC
Q ss_conf             5312453687868999992488604---03585599997075
Q gi|254780674|r   44 KAIMEFESVDEGIIDEILVPAGTEN---IAVNSPILNILMDS   82 (423)
Q Consensus        44 Ka~~ev~S~~~G~l~~i~v~eG~e~---v~VG~~i~~i~~~~   82 (423)
                      ...++|-||++|.+..+ -+..|++   =-.|.-++++-.++
T Consensus        10 ~~~i~v~APv~G~vi~L-~~v~D~vFs~~~~G~G~AI~P~~~   50 (161)
T 1f3z_A           10 TGTIEIIAPLSGEIVNI-EDVPDVVFAEKIVGDGIAIKPTGN   50 (161)
T ss_dssp             --CEEEECSSCEEEEEG-GGSSSHHHHTTSSCEEEEEEECSS
T ss_pred             CCCEEEEECCCCEEEEC-CCCCCHHHHCCCCCCEEEEECCCC
T ss_conf             89689996367279883-309885882678126299983699


No 89 
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens}
Probab=83.63  E-value=0.57  Score=24.76  Aligned_cols=77  Identities=13%  Similarity=0.102  Sum_probs=40.6

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCEEEEE
Q ss_conf             45547989999987666543102334610037723898515321422101311588716898446312358778937895
Q gi|254780674|r  306 QADQKSILDISLEVKQLAQRAKQRKLKPEEYQGGTTSISNMGMLGINSFCAVINPPQSTILAIGAGEKKVVFQNEEIKVA  385 (423)
Q Consensus       306 ~ad~~~l~~i~~~~~~l~~~ar~~~l~~~d~~ggtftiSNlG~~g~~~~~pii~~pq~aILgvG~~~~~~~~~~~~i~~~  385 (423)
                      -.|++++.++.+.++.+..+...-++   +-+|| ++..|+..|....         +=.+++|+....+-+        
T Consensus       222 ~LDn~s~e~l~~~v~~l~~~~~~v~i---eaSGG-I~~~ni~~ya~~G---------VD~is~G~lt~~a~~--------  280 (299)
T 2jbm_A          222 LLDNFKPEELHPTATVLKAQFPSVAV---EASGG-ITLDNLPQFCGPH---------IDVISMGMLTQAAPA--------  280 (299)
T ss_dssp             EEESCCHHHHHHHHHHHHHHCTTSEE---EEESS-CCTTTHHHHCCTT---------CCEEECTHHHHSCCC--------
T ss_pred             EEECCCHHHHHHHHHHHHCCCCCEEE---EEECC-CCHHHHHHHHHCC---------CCEEECCHHHCCCCC--------
T ss_conf             98088999999999998464897699---99899-9999999999729---------899982965459986--------


Q ss_pred             EEEEEEEEEEECEEEHHHHHHH
Q ss_conf             4889898520011402889999
Q gi|254780674|r  386 TIMNATLSADHRSVDGAIASKL  407 (423)
Q Consensus       386 ~~~~ltls~DHRvidGa~aa~F  407 (423)
                          +-+|.|=...+|+..+.|
T Consensus       281 ----~D~sl~i~~~~~~p~~k~  298 (299)
T 2jbm_A          281 ----LDFSLKLFAKEVAPVPKI  298 (299)
T ss_dssp             ----CCEEEEEEEEC-------
T ss_pred             ----CCEEEEEEECCCCCCCCC
T ss_conf             ----431799775588777777


No 90 
>1pmr_A Dihydrolipoyl succinyltransferase; 2-oxoglutarate dehydrogenase, lipoyl domain, complex, glycolysis; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=83.51  E-value=0.12  Score=29.38  Aligned_cols=33  Identities=12%  Similarity=0.257  Sum_probs=28.1

Q ss_pred             CCCCEEEEEEECCCCCEEECCCEEEEEECCCCCC
Q ss_conf             8786899999248860403585599997075421
Q gi|254780674|r   52 VDEGIIDEILVPAGTENIAVNSPILNILMDSTEI   85 (423)
Q Consensus        52 ~~~G~l~~i~v~eG~e~v~VG~~i~~i~~~~~~~   85 (423)
                      -.+|+|.+|++++| |.|..|++|+.+++++...
T Consensus        14 ~~~g~i~~w~v~~G-d~V~~gd~l~eiEtdK~~~   46 (80)
T 1pmr_A           14 VADATVATWHKKPG-DAVVRDEVLVEIETDKVVL   46 (80)
T ss_dssp             CSCEECCBCCCCTT-CCBSSSCCBCBCCSSSCCC
T ss_pred             CCEEEEEEEEECCC-CEECCCCEEEEEECCCEEE
T ss_conf             75899999990798-9987999899999386589


No 91 
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, quinolinic acid; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=83.44  E-value=0.92  Score=23.38  Aligned_cols=25  Identities=8%  Similarity=0.108  Sum_probs=18.1

Q ss_pred             EEEEECCCCCEEECCCEEEEEECCCC
Q ss_conf             99992488604035855999970754
Q gi|254780674|r   58 DEILVPAGTENIAVNSPILNILMDST   83 (423)
Q Consensus        58 ~~i~v~eG~e~v~VG~~i~~i~~~~~   83 (423)
                      ..+++++| +.+.-|++|+.+..+..
T Consensus        73 v~~~~~dG-~~v~~g~~il~i~G~~~   97 (284)
T 1qpo_A           73 VLDRVEDG-ARVPPGEALMTLEAQTR   97 (284)
T ss_dssp             EEEECCTT-CEECTTCEEEEEEEEHH
T ss_pred             EEEECCCC-CEEECCCEEEEEEECHH
T ss_conf             98882889-99864867999998899


No 92 
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus HB8}
Probab=82.72  E-value=0.77  Score=23.89  Aligned_cols=38  Identities=13%  Similarity=0.170  Sum_probs=22.2

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf             455479899999876665431023346100377238985153214
Q gi|254780674|r  306 QADQKSILDISLEVKQLAQRAKQRKLKPEEYQGGTTSISNMGMLG  350 (423)
Q Consensus       306 ~ad~~~l~~i~~~~~~l~~~ar~~~l~~~d~~ggtftiSNlG~~g  350 (423)
                      -.|++++.++.+.++.+..+.     . =+.+|| +++.|+..|.
T Consensus       221 ~LDn~~~e~i~~~v~~~~~~v-----~-ieaSGG-I~~~ni~~ya  258 (286)
T 1x1o_A          221 LLDNFPLEALREAVRRVGGRV-----P-LEASGN-MTLERAKAAA  258 (286)
T ss_dssp             EEESCCHHHHHHHHHHHTTSS-----C-EEEESS-CCHHHHHHHH
T ss_pred             EECCCCHHHHHHHHHHHCCCE-----E-EEEECC-CCHHHHHHHH
T ss_conf             328989999999999877966-----9-999799-9999999999


No 93 
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=82.59  E-value=1  Score=23.02  Aligned_cols=25  Identities=12%  Similarity=0.073  Sum_probs=17.8

Q ss_pred             EEEEECCCCCEEECCCEEEEEECCCC
Q ss_conf             99992488604035855999970754
Q gi|254780674|r   58 DEILVPAGTENIAVNSPILNILMDST   83 (423)
Q Consensus        58 ~~i~v~eG~e~v~VG~~i~~i~~~~~   83 (423)
                      ..+++++| +.+.-|++|+.+..+..
T Consensus        60 v~~~~~dG-~~v~~g~~Il~i~G~~~   84 (273)
T 2b7n_A           60 CVQTIKDK-ERFKPKDALMEIRGDFS   84 (273)
T ss_dssp             EEEECCTT-CEECTTCEEEEEEEEHH
T ss_pred             CEEEECCC-CEEECCCEEEEEEEHHH
T ss_conf             08973376-37508989999986099


No 94 
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=81.74  E-value=0.88  Score=23.50  Aligned_cols=25  Identities=8%  Similarity=0.142  Sum_probs=15.1

Q ss_pred             EEEEECCCCCEEECCCEEEEEECCCC
Q ss_conf             99992488604035855999970754
Q gi|254780674|r   58 DEILVPAGTENIAVNSPILNILMDST   83 (423)
Q Consensus        58 ~~i~v~eG~e~v~VG~~i~~i~~~~~   83 (423)
                      .++++++| +.+.-|++|+.+.....
T Consensus        88 v~~~~~dG-~~v~~g~~i~~i~G~~~  112 (298)
T 3gnn_A           88 VDWRHREG-DRMSADSTVCELRGPAR  112 (298)
T ss_dssp             EEESSCTT-CEECTTCEEEEEEEEHH
T ss_pred             EEEECCCC-CEEECCCEEEEEEECHH
T ss_conf             87664889-89637988999996799


No 95 
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=81.03  E-value=0.99  Score=23.17  Aligned_cols=52  Identities=15%  Similarity=0.213  Sum_probs=27.4

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCEE
Q ss_conf             45547989999987666543102334610037723898515321422101311588716898446312
Q gi|254780674|r  306 QADQKSILDISLEVKQLAQRAKQRKLKPEEYQGGTTSISNMGMLGINSFCAVINPPQSTILAIGAGEK  373 (423)
Q Consensus       306 ~ad~~~l~~i~~~~~~l~~~ar~~~l~~~d~~ggtftiSNlG~~g~~~~~pii~~pq~aILgvG~~~~  373 (423)
                      -.|++++.++.+.++.+..     +.. =+-+ |.++.+|+-.|.....         =++++|+...
T Consensus       233 ~lDn~~~~~l~~~V~~~~~-----~v~-ieaS-GGI~~~ni~~ya~~GV---------D~Is~g~lt~  284 (296)
T 1qap_A          233 MLDNFNTDQMREAVKRVNG-----QAR-LEVS-GNVTAETLREFAETGV---------DFISVGALTK  284 (296)
T ss_dssp             EESSCCHHHHHHHHHTTCT-----TCC-EEEC-CCSCHHHHHHHHHTTC---------SEEECSHHHH
T ss_pred             EECCCCHHHHHHHHHHHCC-----CEE-EEEE-CCCCHHHHHHHHHCCC---------CEEECCHHHC
T ss_conf             8648999999999998579-----679-9997-9999999999997698---------9998285546


No 96 
>2auk_A DNA-directed RNA polymerase beta' chain; sandwich-barrel hybrid motif, transferase; 2.30A {Escherichia coli}
Probab=80.84  E-value=1.6  Score=21.71  Aligned_cols=34  Identities=18%  Similarity=0.375  Sum_probs=17.8

Q ss_pred             EEECCCCEECCCCEEEEEECCCCEEEEECCCCCEEE
Q ss_conf             981689785279859999526531245368786899
Q gi|254780674|r   23 WIKQEGDKISPGDILCEIETDKAIMEFESVDEGIID   58 (423)
Q Consensus        23 Wl~k~GD~V~~gd~l~eVETDKa~~ev~S~~~G~l~   58 (423)
                      .++++||.|++||.||+-  |--+.-+=|..+|++.
T Consensus        64 L~VkdG~~Vk~g~~la~W--DP~~~pIisE~~G~v~   97 (190)
T 2auk_A           64 LAKGDGEQVAGGETVANW--DPHTMPVITEVSGFVR   97 (190)
T ss_dssp             ESSCTTCEECTTCEEEEC--CSSEEEEECSSCEEEE
T ss_pred             EEECCCCEECCCCEEEEE--CCCCCEEEEEEEEEEE
T ss_conf             998698997389899986--7988528888612899


No 97 
>1o4u_A Type II quinolic acid phosphoribosyltransferase; TM1645, structural genomics, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=80.44  E-value=0.9  Score=23.44  Aligned_cols=25  Identities=20%  Similarity=0.131  Sum_probs=16.0

Q ss_pred             EEEEECCCCCEEECCCEEEEEECCCC
Q ss_conf             99992488604035855999970754
Q gi|254780674|r   58 DEILVPAGTENIAVNSPILNILMDST   83 (423)
Q Consensus        58 ~~i~v~eG~e~v~VG~~i~~i~~~~~   83 (423)
                      .++++++| +.+.-|++|+.+..+..
T Consensus        73 v~~~~~dG-~~v~~g~~i~~i~G~~~   97 (285)
T 1o4u_A           73 SKFNVEDG-EYLEGTGVIGEIEGNTY   97 (285)
T ss_dssp             EEESCCTT-CEEESCEEEEEEEEEHH
T ss_pred             EEEEECCC-CEECCCCEEEEEEECHH
T ss_conf             99992799-88217837899996689


No 98 
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=78.11  E-value=1.5  Score=21.98  Aligned_cols=54  Identities=20%  Similarity=0.281  Sum_probs=30.2

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEE
Q ss_conf             4554798999998766654310233461003772389851532142210131158871689844631235
Q gi|254780674|r  306 QADQKSILDISLEVKQLAQRAKQRKLKPEEYQGGTTSISNMGMLGINSFCAVINPPQSTILAIGAGEKKV  375 (423)
Q Consensus       306 ~ad~~~l~~i~~~~~~l~~~ar~~~l~~~d~~ggtftiSNlG~~g~~~~~pii~~pq~aILgvG~~~~~~  375 (423)
                      -.|++++.++.+.+..+..+.      .=+.+| .++..|+..|.....         -++++|+.....
T Consensus       232 mLDn~~~~~~~~~v~~i~~~v------~ieaSG-GI~~~ni~~yA~~GV---------D~IS~G~lt~sa  285 (300)
T 3l0g_A          232 LLDNMSISEIKKAVDIVNGKS------VLEVSG-CVNIRNVRNIALTGV---------DYISIGCITNSF  285 (300)
T ss_dssp             EEESCCHHHHHHHHHHHTTSS------EEEEES-SCCTTTHHHHHTTTC---------SEEECGGGTSSC
T ss_pred             ECCCCCHHHHHHHHHHHCCCE------EEEEEC-CCCHHHHHHHHHCCC---------CEEECCHHHCCC
T ss_conf             608999899999999857967------999979-999999999997599---------999869766699


No 99 
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=76.33  E-value=2.4  Score=20.59  Aligned_cols=49  Identities=10%  Similarity=0.161  Sum_probs=26.2

Q ss_pred             EECCCCCCHHHHHHHHHHHHHHHCCCCCC--------CCCC-CCCEEEEEC---CCCCCCC
Q ss_conf             41455479899999876665431023346--------1003-772389851---5321422
Q gi|254780674|r  304 IRQADQKSILDISLEVKQLAQRAKQRKLK--------PEEY-QGGTTSISN---MGMLGIN  352 (423)
Q Consensus       304 Ik~ad~~~l~~i~~~~~~l~~~ar~~~l~--------~~d~-~ggtftiSN---lG~~g~~  352 (423)
                      ++.....++.+++..+++.+.++.+....        ..++ .+.++++||   +|.|+.+
T Consensus       302 ~~~~~~~~l~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~vssw~r~~~y~~D  362 (421)
T 2bgh_A          302 VDAEWDKDFPDLIGPLRTSLEKTEDDHNHELLKGMTCLYELEPQELLSFTSWCRLGFYDLD  362 (421)
T ss_dssp             ECTTCCCCGGGGHHHHHHHTCCCSSCHHHHHHHHHHHHHTSCGGGEEEEEEETTSCGGGCC
T ss_pred             ECHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEE
T ss_conf             0244318458999999999999999998999865467650478973999378999867601


No 100
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxynivalenol, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=75.77  E-value=2.5  Score=20.43  Aligned_cols=19  Identities=5%  Similarity=0.025  Sum_probs=10.4

Q ss_pred             ECCCCCCHHHHHHHHHHHH
Q ss_conf             1455479899999876665
Q gi|254780674|r  305 RQADQKSILDISLEVKQLA  323 (423)
Q Consensus       305 k~ad~~~l~~i~~~~~~l~  323 (423)
                      .+....++..++..+++-.
T Consensus       320 ~~l~~~~l~~~A~~Ir~~~  338 (451)
T 2rkv_A          320 GEIANESLGATASRLRSEL  338 (451)
T ss_dssp             HHHHHSCHHHHHHHHHTTC
T ss_pred             HHHCCCCHHHHHHHHHHHH
T ss_conf             7751385999999999999


No 101
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=63.86  E-value=5.4  Score=18.25  Aligned_cols=99  Identities=8%  Similarity=0.125  Sum_probs=45.2

Q ss_pred             CCCCCCCCCHHHHHHHHHHCCC---CCCCC---CCCCCEEC---CCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHHHH
Q ss_conf             6554322210111001100000---00011---23441012---556654156514642020341455479899999876
Q gi|254780674|r  250 NKISVNDIILKAFALAMIQVPE---ANVSW---TTNAMIRH---KHIDISVAVSIPGGIVTPIIRQADQKSILDISLEVK  320 (423)
Q Consensus       250 ~kit~~~~l~kA~a~AL~~~P~---~Na~~---~~~~i~~~---~~vnIgiAv~~~~GL~vPvIk~ad~~~l~~i~~~~~  320 (423)
                      .++|++.++.-|++.+|.++-.   ....+   ..+.-...   ..-.+|..+    |++.-.+.=....++.++++.+.
T Consensus       233 ~g~T~~~~l~aa~~~~l~~~~~~~~~~~~~~~~v~~R~~~~~~~~~~~~~~~~----g~~~~~l~v~~~~~~~~~~~~~~  308 (422)
T 1q9j_A          233 HRLSLNAVVAAAILLTEWQLRNTPHVPIPYVYPVDLRFVLAPPVAPTEATNLL----GAASYLAEIGPNTDIVDLASDIV  308 (422)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHTCSSCCEEEEEEEETTTTSSSCCCTTTBSCCE----EEEEEEECCCSSCCHHHHHHHHH
T ss_pred             HCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHCEE----EEEEEEEECCCCCCHHHHHHHHH
T ss_conf             39999999999999999998798987999326563888876787776542320----41468896168999899999999


Q ss_pred             HHHHHH-CCCCCCCC------------CCCCCEEEEECCCCCCCC
Q ss_conf             665431-02334610------------037723898515321422
Q gi|254780674|r  321 QLAQRA-KQRKLKPE------------EYQGGTTSISNMGMLGIN  352 (423)
Q Consensus       321 ~l~~~a-r~~~l~~~------------d~~ggtftiSNlG~~g~~  352 (423)
                      +..... +.+....+            .....++.+||+|.+...
T Consensus       309 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~n~~~~~~~  353 (422)
T 1q9j_A          309 ATLRADLANGVIQQSGLHFGTAFEGTPPGLPPLVFCTDATSFPTM  353 (422)
T ss_dssp             HHHHHHHHHTHHHHSCCBGGGGGGCCCSSSCCCEEEECCCCCCSC
T ss_pred             HHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCC
T ss_conf             999999971623688887654302677777867999927887755


No 102
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=62.33  E-value=3.8  Score=19.25  Aligned_cols=57  Identities=11%  Similarity=0.082  Sum_probs=27.2

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHCC-CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCEE
Q ss_conf             45547989999987666543102-334610037723898515321422101311588716898446312
Q gi|254780674|r  306 QADQKSILDISLEVKQLAQRAKQ-RKLKPEEYQGGTTSISNMGMLGINSFCAVINPPQSTILAIGAGEK  373 (423)
Q Consensus       306 ~ad~~~l~~i~~~~~~l~~~ar~-~~l~~~d~~ggtftiSNlG~~g~~~~~pii~~pq~aILgvG~~~~  373 (423)
                      -.|++++.++.+.+..+..+... .+.. =+-+ |.++..|+-.|.....+         ++++|+...
T Consensus       224 ~LDn~~~~~~k~~v~~l~~~~~~~~~v~-ieaS-GGI~~~ni~~ya~tGvD---------~Is~g~lt~  281 (294)
T 3c2e_A          224 MLDNFKGDGLKMCAQSLKNKWNGKKHFL-LECS-GGLNLDNLEEYLCDDID---------IYSTSSIHQ  281 (294)
T ss_dssp             ECCC---------------------CCE-EEEE-CCCCC------CCCSCS---------EEECGGGTS
T ss_pred             EECCCCHHHHHHHHHHHHHHHCCCCCEE-EEEE-CCCCHHHHHHHHHCCCC---------EEEECHHHC
T ss_conf             3268997999999999987754488579-9998-99999999999984989---------999397771


No 103
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=60.23  E-value=7.6  Score=17.24  Aligned_cols=18  Identities=6%  Similarity=0.196  Sum_probs=12.5

Q ss_pred             EHHHHHHHHHHHHHHHCC
Q ss_conf             028899999999998719
Q gi|254780674|r  400 DGAIASKLLAKFKEYIEN  417 (423)
Q Consensus       400 dGa~aa~Fl~~~~~~le~  417 (423)
                      .-.+.-+|.+.|.+.|+.
T Consensus       435 ~~~~me~f~~~f~~~L~~  452 (454)
T 2e1v_A          435 SATQMEDFVHIFDDGLKA  452 (454)
T ss_dssp             EHHHHHHHHHHHHHHC--
T ss_pred             CHHHHHHHHHHHHHHHHH
T ss_conf             999999999999998870


No 104
>2hsi_A Putative peptidase M23; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.90A {Pseudomonas aeruginosa PAO1}
Probab=56.86  E-value=5.1  Score=18.40  Aligned_cols=13  Identities=15%  Similarity=0.465  Sum_probs=7.1

Q ss_pred             CCCCCEEEEECCC
Q ss_conf             5665415651464
Q gi|254780674|r  286 HIDISVAVSIPGG  298 (423)
Q Consensus       286 ~vnIgiAv~~~~G  298 (423)
                      ..|-||-++.+.|
T Consensus       178 ~~h~GiDi~~~~g  190 (282)
T 2hsi_A          178 NPHSGLDFAVPAG  190 (282)
T ss_dssp             -CCCSEEECCCTT
T ss_pred             CCCCEEEEECCCC
T ss_conf             7401259974899


No 105
>2gu1_A Zinc peptidase; alpha/beta, beta barrel, structural genomics, PSI, protein structure initiative; 1.90A {Vibrio cholerae}
Probab=54.97  E-value=5.8  Score=18.01  Aligned_cols=19  Identities=21%  Similarity=0.454  Sum_probs=15.3

Q ss_pred             ECEEEHHHHHHHHHHHHHH
Q ss_conf             0114028899999999998
Q gi|254780674|r  396 HRSVDGAIASKLLAKFKEY  414 (423)
Q Consensus       396 HRvidGa~aa~Fl~~~~~~  414 (423)
                      .+-+.+.+-++|+...+++
T Consensus       333 ~~~l~~~~~~~f~~~~~~~  351 (361)
T 2gu1_A          333 AKSLSSNQKTSFLARVSEF  351 (361)
T ss_dssp             -------------------
T ss_pred             CCCCCHHHHHHHHHHHHHH
T ss_conf             8878989999999999998


No 106
>2i14_A Nicotinate-nucleotide pyrophosphorylase; ligand binding, phosphoribosylpyrophosphate, Zn metal ION, structural genomics, PSI; HET: PCP; 2.90A {Pyrococcus furiosus} SCOP: c.1.17.1 d.41.2.1
Probab=48.39  E-value=7.7  Score=17.19  Aligned_cols=22  Identities=27%  Similarity=0.366  Sum_probs=15.9

Q ss_pred             EEECCCCCEEECCCEEEEEECCC
Q ss_conf             99248860403585599997075
Q gi|254780674|r   60 ILVPAGTENIAVNSPILNILMDS   82 (423)
Q Consensus        60 i~v~eG~e~v~VG~~i~~i~~~~   82 (423)
                      ..++|| +.+..|+|++.|....
T Consensus        80 ~av~EG-~~v~~g~pil~I~G~~  101 (395)
T 2i14_A           80 YAMPEG-TIFHPYEPVLQIEGDY  101 (395)
T ss_dssp             EECCTT-CEECTTSCSEEEEEEH
T ss_pred             EECCCC-CEECCCCEEEEEEECH
T ss_conf             981797-3865997699998279


No 107
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=44.27  E-value=13  Score=15.58  Aligned_cols=34  Identities=12%  Similarity=0.038  Sum_probs=24.3

Q ss_pred             EEEEEEEEECEEEHHHHHHHHH----HHHHHHCCHHHH
Q ss_conf             8989852001140288999999----999987198897
Q gi|254780674|r  388 MNATLSADHRSVDGAIASKLLA----KFKEYIENPVWM  421 (423)
Q Consensus       388 ~~ltls~DHRvidGa~aa~Fl~----~~~~~le~P~~l  421 (423)
                      +.+.+.||-++.+...+.+|+.    .+.+++++|...
T Consensus       374 l~l~~~y~~~~~~~~~i~~l~~~f~~~l~~~~~~p~~~  411 (436)
T 1l5a_A          374 LCLDITADLASYPQSHWQSHCERFPRFFEQLLARFQQV  411 (436)
T ss_dssp             EEEEEEEETTTSCHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             99999982334899999999999999999999682875


No 108
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivalenol, T-2 toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=35.10  E-value=19  Score=14.65  Aligned_cols=33  Identities=12%  Similarity=0.084  Sum_probs=29.4

Q ss_pred             EEEEEEEEEEECEEEHHHHHHHHHHHHHHHCCH
Q ss_conf             488989852001140288999999999987198
Q gi|254780674|r  386 TIMNATLSADHRSVDGAIASKLLAKFKEYIENP  418 (423)
Q Consensus       386 ~~~~ltls~DHRvidGa~aa~Fl~~~~~~le~P  418 (423)
                      .-+.+++.||-...+-..+.+|++.+.++|+.-
T Consensus       485 g~l~l~~~Y~~~~~~~~~v~~~l~~~~~~L~~F  517 (519)
T 3fot_A          485 DASTLNIIYNDANYTEAEVQKYLQSIVEFMLAF  517 (519)
T ss_dssp             TEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHT
T ss_pred             CEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             989999998865449999999999999999973


No 109
>1hcz_A Cytochrome F; electron transport, photosynthesis, cytochrome B6F complex, chloroplast transmembrane; HET: HEM; 1.96A {Brassica rapa} SCOP: b.2.6.1 b.84.2.2 PDB: 1tkw_B* 1ctm_A* 2pcf_B*
Probab=25.90  E-value=12  Score=16.02  Aligned_cols=21  Identities=24%  Similarity=0.586  Sum_probs=8.5

Q ss_pred             CCCCCCCEEEEEECCCEEEEEEE
Q ss_conf             31158871689844631235877
Q gi|254780674|r  356 AVINPPQSTILAIGAGEKKVVFQ  378 (423)
Q Consensus       356 pii~~pq~aILgvG~~~~~~~~~  378 (423)
                      |+-|-|-|+  |+|....+.|.+
T Consensus       226 pLTnnPNVG--GFGQ~e~EIVLQ  246 (252)
T 1hcz_A          226 PLTSNPNVG--GFGQGDAEIVLQ  246 (252)
T ss_dssp             BSBCCCCCC--EEEEEEEEEEEC
T ss_pred             CCCCCCCCC--CCCCCCEEEEEC
T ss_conf             665699866--667662499812


No 110
>3nyy_A Putative glycyl-glycine endopeptidase LYTM; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE 2PE SO4; 1.60A {Ruminococcus gnavus}
Probab=23.44  E-value=29  Score=13.33  Aligned_cols=18  Identities=11%  Similarity=-0.060  Sum_probs=9.9

Q ss_pred             CHHHHHHHHHHCCCCCCC
Q ss_conf             101110011000000001
Q gi|254780674|r  258 ILKAFALAMIQVPEANVS  275 (423)
Q Consensus       258 l~kA~a~AL~~~P~~Na~  275 (423)
                      -.+++-..+..||.-++.
T Consensus        83 ~~~~~~~~~~~~P~~~~~  100 (252)
T 3nyy_A           83 SCRAIWNDVKYFPIPQSL  100 (252)
T ss_dssp             HHHHHHTTCCSCSSCEES
T ss_pred             HHHHHHHHCEECCCCCCC
T ss_conf             114554210156578766


Done!