RPSBLAST alignment for GI: 254780674 and conserved domain: TIGR01347
>gnl|CDD|162309 TIGR01347, sucB, 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component). dihydrolipoamide acetyltransferase. The seed for this model includes mitochondrial and Gram-negative bacterial forms. Mycobacterial candidates are highly derived, differ in having and extra copy of the lipoyl-binding domain at the N-terminus. They score below the trusted cutoff, but above the noise cutoff and above all examples of dihydrolipoamide acetyltransferase. Length = 403
Score = 216 bits (551), Expect = 1e-56
Identities = 131/426 (30%), Positives = 207/426 (48%), Gaps = 33/426 (7%)
Query: 5 TITMPSLSPTMTEGKLAKWIKQEGDKISPGDILCEIETDKAIMEFESVDEGIIDEILVPA 64
I +P L+ ++TEG +A+W K+ GD + + + EIETDK ++E S +G++ EIL
Sbjct: 2 EIKVPELAESITEGTVAEWHKKVGDTVKRDENIVEIETDKVVLEVPSPADGVLQEILFKE 61
Query: 65 GTENIAVNSPI--LNILMDSTEIPPSP-PLSKENIVEVREEHSHSSPVVVREKHSKNRPI 121
G + + L D+T PP+ KE + ++ NRP
Sbjct: 62 GD-TVESGQVLAILEEGNDATAAPPAKSGEEKEETPAASAAAAPTAA--------ANRPS 112
Query: 122 ASPLARRLAGEHGIDLSSLSGSGPHGRIVKSDIETLISTKTNVKDYSTIQSFGLVDESID 181
SP ARRLA EHGIDLS++ G+G GR+ K DI K S
Sbjct: 113 LSPAARRLAKEHGIDLSAVPGTGVTGRVTKEDII-----KKTEAPASAQAPAPA-----A 162
Query: 182 ANILNLFAKDSYEVIPHDNIRKTIACRLQQSKQTIPHFYVSIDCNIDNLLSLREQMNRTL 241
A E + +R+ IA RL++++ + + ++ ++ LR++
Sbjct: 163 AAKAPANFTRPEERVKMTRLRQRIAERLKEAQNSTAMLTTFNEVDMSAVMELRKR----- 217
Query: 242 QFHREEISNKISVN----DIILKAFALAMIQVPEANVSWTTNAMIRHKHIDISVAVSIPG 297
++EE K V +KA A+ + PE N + ++ + DISVAVS
Sbjct: 218 --YKEEFEKKHGVKLGFMSFFVKAVVAALKRFPEVNAEIDGDDIVYKDYYDISVAVSTDR 275
Query: 298 GIVTPIIRQADQKSILDISLEVKQLAQRAKQRKLKPEEYQGGTTSISNMGMLGINSFCAV 357
G+V P++R AD+ S DI E+ L ++A+ KL E+ GGT +I+N G+ G +
Sbjct: 276 GLVVPVVRNADRMSFADIEKEIADLGKKARDGKLTLEDMTGGTFTITNGGVFGSLMSTPI 335
Query: 358 INPPQSTILAIGAGEKKVVFQNEEIKVATIMNATLSADHRSVDGAIASKLLAKFKEYIEN 417
INPPQS IL + +++ V N +I++ +M LS DHR +DG A L KE +E+
Sbjct: 336 INPPQSAILGMHGIKERPVAVNGQIEIRPMMYLALSYDHRLIDGKEAVTFLVTIKELLED 395
Query: 418 PVWMLM 423
P +L+
Sbjct: 396 PRRLLL 401