HHsearch alignment for GI: 254780675 and conserved domain: COG2303
>COG2303 BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism].
Probab=97.78 E-value=3.6e-05 Score=56.35 Aligned_cols=65 Identities=25% Similarity=0.450 Sum_probs=43.8
Q ss_pred CCCCHHHHHCCCCCCCCHHHHHHCCCCCC-CCEEEEECCC--CEEEEECCCEEECCCCEEEEECCCCC
Q ss_conf 22100122012332210013442022343-1012440367--40211023224305742200002322
Q gi|254780675|r 233 QFVQRSLQKRGIKILTESKISSVKQKGDM-VSVQVERKDG--SVSSMQAEKLLLSAGVQGNIENIGLE 297 (481)
Q Consensus 233 ~~~~~~l~~~Gv~i~~~~~v~~v~~~~~~-~~v~~~~~dG--~~~~i~~D~vl~a~Gr~Pn~~~L~Le 297 (481)
T Consensus 207 a~l~~a~~~~nl~v~t~a~v~ri~~~~~r~~gv~~~~~~~~~~~~~~a~~~viL~AGai~Sp~LL~~S 274 (542)
T COG2303 207 AYLKPALKRPNLTLLTGARVRRILLEGDRAVGVEVEIGDGGTIETAVAAREVVLAAGAINSPKLLLLS 274 (542)
T ss_pred CCCHHHHHCCCCEEECCCEEEEEEEECCEEEEEEEEECCCCCEEEEECCCEEEECCCCCCCHHHHHHC
T ss_conf 05466750898389637889999998986899999968986336885178799856763799999866