HHsearch alignment for GI: 254780675 and conserved domain: PRK05192

>PRK05192 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; Validated.
Probab=98.87  E-value=2.6e-08  Score=79.11  Aligned_cols=73  Identities=21%  Similarity=0.229  Sum_probs=46.2

Q ss_pred             CCCCEE-ECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEEHHHEEECCCHHHHHCCCCC-
Q ss_conf             487423-025858830444553244412320255554302466443212232002454303340001496876107972-
Q gi|254780675|r  311 DGYGRT-NVPGIYAIGDVAGAPMLAHKAEHEGIICIEKIAGKSKVYPLDKSKIPGCTYCNPQVASIGLTEEKARSQGLD-  388 (481)
Q Consensus       311 d~~~qT-s~p~IyA~GDv~g~~~l~~~A~~qg~~aa~~i~~~~~~~~~d~~~ip~~vft~P~ia~vG~te~ea~~~g~~-  388 (481)
T Consensus       353 ~~tLEtK~i~gLf~AGQINGTTGY-EEAAaQGliAGINAa~~~~~~~------p~-il-~R~eaYIGVlIDDLvtkGv~E  423 (621)
T PRK05192        353 KPTLETKKIKGLFFAGQINGTTGY-EEAAAQGLIAGINAALKVQGKE------PF-IL-KRSEAYIGVLIDDLVTKGTKE  423 (621)
T ss_pred             HHHHCCCCCCCEEECCCCCCCCHH-HHHHHCCHHHHHHHHHHHCCCC------CC-CC-CCCCCHHHHHHHHHHHCCCCC
T ss_conf             335331655987777766775078-9988546798999999965999------87-64-603112444156676079996


Q ss_pred             -EEEE
Q ss_conf             -7999
Q gi|254780675|r  389 -IRVG  392 (481)
Q Consensus       389 -~~~~  392 (481)
T Consensus       424 PYRMF  428 (621)
T PRK05192        424 PYRMF  428 (621)
T ss_pred             CCCCC
T ss_conf             41033