HHsearch alignment for GI: 254780675 and conserved domain: PRK05192
>PRK05192 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; Validated.
Probab=98.87 E-value=2.6e-08 Score=79.11 Aligned_cols=73 Identities=21% Similarity=0.229 Sum_probs=46.2
Q ss_pred CCCCEE-ECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEEHHHEEECCCHHHHHCCCCC-
Q ss_conf 487423-025858830444553244412320255554302466443212232002454303340001496876107972-
Q gi|254780675|r 311 DGYGRT-NVPGIYAIGDVAGAPMLAHKAEHEGIICIEKIAGKSKVYPLDKSKIPGCTYCNPQVASIGLTEEKARSQGLD- 388 (481)
Q Consensus 311 d~~~qT-s~p~IyA~GDv~g~~~l~~~A~~qg~~aa~~i~~~~~~~~~d~~~ip~~vft~P~ia~vG~te~ea~~~g~~- 388 (481)
T Consensus 353 ~~tLEtK~i~gLf~AGQINGTTGY-EEAAaQGliAGINAa~~~~~~~------p~-il-~R~eaYIGVlIDDLvtkGv~E 423 (621)
T PRK05192 353 KPTLETKKIKGLFFAGQINGTTGY-EEAAAQGLIAGINAALKVQGKE------PF-IL-KRSEAYIGVLIDDLVTKGTKE 423 (621)
T ss_pred HHHHCCCCCCCEEECCCCCCCCHH-HHHHHCCHHHHHHHHHHHCCCC------CC-CC-CCCCCHHHHHHHHHHHCCCCC
T ss_conf 335331655987777766775078-9988546798999999965999------87-64-603112444156676079996
Q ss_pred -EEEE
Q ss_conf -7999
Q gi|254780675|r 389 -IRVG 392 (481)
Q Consensus 389 -~~~~ 392 (481)
T Consensus 424 PYRMF 428 (621)
T PRK05192 424 PYRMF 428 (621)
T ss_pred CCCCC
T ss_conf 41033