HHsearch alignment for GI: 254780675 and conserved domain: PRK05257

Probab=97.51  E-value=0.00034  Score=49.28  Aligned_cols=85  Identities=20%  Similarity=0.319  Sum_probs=58.3

Q ss_pred             CCCCCHHHHH-CCCCCCCCHHHHHHCCCCCC-CCEEEEE-CCCCEEEEECCCEEECCCCEEEEECCC-CCCCCCCCCC--
Q ss_conf             2221001220-12332210013442022343-1012440-367402110232243057422000023-2221123573--
Q gi|254780675|r  232 SQFVQRSLQK-RGIKILTESKISSVKQKGDM-VSVQVER-KDGSVSSMQAEKLLLSAGVQGNIENIG-LEKIGVKTSN--  305 (481)
Q Consensus       232 ~~~~~~~l~~-~Gv~i~~~~~v~~v~~~~~~-~~v~~~~-~dG~~~~i~~D~vl~a~Gr~Pn~~~L~-Le~~gi~~~~--  305 (481)
T Consensus       190 T~~l~~~l~~~~~~~l~~~~eV~~i~r~~dg~W~v~~~~~~~~~~~~v~a~fVFiGAGG~----aL~LLQksgI~E~~gy  265 (499)
T PRK05257        190 TRQLVGYLQKQGNFELQLGHEVRDIKRNDDGTWTVTVKDLKTGEKRTVRAKFVFIGAGGG----ALPLLQKSGIPEAKGY  265 (499)
T ss_pred             HHHHHHHHHHCCCEEEEECCEEEEEEECCCCCEEEEEEECCCCCEEEEEECEEEECCCCH----HHHHHHHCCCCHHCCC
T ss_conf             999999997589838993688756088899987999998788972799825699888814----5788988399231275


Q ss_pred             -EEEEECCCCEEECCC
Q ss_conf             -266424874230258
Q gi|254780675|r  306 -GCIIVDGYGRTNVPG  320 (481)
Q Consensus       306 -g~i~vd~~~qTs~p~  320 (481)
T Consensus       266 gGFPVsG~~L~c~npe  281 (499)
T PRK05257        266 GGFPVSGQFLVCENPE  281 (499)
T ss_pred             CCCCCCCEEEECCCHH
T ss_conf             6676045688339989