HHsearch alignment for GI: 254780675 and conserved domain: PRK12769
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed.
Probab=99.98 E-value=1.9e-32 Score=254.53 Aligned_cols=276 Identities=19% Similarity=0.283 Sum_probs=187.2
Q ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEC-CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH-H
Q ss_conf 489998985799999999987993999978-88862463256737088999999999998421178213487544999-9
Q gi|254780675|r 6 DIILIGSGPAGYVAAIRAAQLGFKVAIVEY-AGLGGICLNWGCIPTKSLLRSAEILDHIQNAQHYGLNVAGKVEFNIE-D 83 (481)
Q Consensus 6 DvvIIG~GpAG~~aA~~~a~~G~~V~liEk-~~~GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~-~ 83 (481)
T Consensus 329 kVAIIGsGPAGLsaA~~Lar~G~~VTVFE~~~~~GGl-L------------------------~yGI-----P~fRLpk~ 378 (654)
T PRK12769 329 RVAIIGAGPAGLACADVLTRNGVAVTVYDRHPEIGGL-L------------------------TFGI-----PAFKLDKS 378 (654)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCE-E------------------------EECC-----CCCCCCHH
T ss_conf 8999897789999999999769757995257778866-7------------------------5248-----62227789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCC-C
Q ss_conf 999999999985344687630141421000001122221002368752001355554322586389972455257543-1
Q gi|254780675|r 84 IVKRSRDISHRLNRGVEFLMHKNKVDIIWGKATLKNPSEITVSKPSQPAVQPQHPIPKKVLGEGTYKAKHIIIATGAR-P 162 (481)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~G~a~f~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~a~~ivIATGs~-p 162 (481)
T Consensus 379 vv~~ei-----------~~l~~lGV~f~~n~~V--G-kDitl~----------------eL---~~~yDAVfla~Ga~~~ 425 (654)
T PRK12769 379 LLARRR-----------EIFSAMGIHFELNCEV--G-KDISLE----------------SL---LEDYDAVFVGVGTYRS 425 (654)
T ss_pred HHHHHH-----------HHHHHCCCEEECCCEE--C-CCCCHH----------------HH---HHCCCEEEEECCCCCC
T ss_conf 999999-----------9998269889837176--8-765899----------------99---7369989995178878
Q ss_pred CCCCCCCCCCCCCCCCCCCE--------ECC---------CCCCCCCCCCCCCCCCCCHHHHHCCCC-CCCCEECCCC-C
Q ss_conf 11011134555422124521--------113---------334443215654332100023210133-3100000000-1
Q gi|254780675|r 163 RHIEGIEPDSHLIWTYFDAL--------KPS---------KTPKSLIVMGSGAIGVEFSSFYKSLDV-DVSLIEVKDR-I 223 (481)
Q Consensus 163 ~~~~g~~~~~~~~~t~~~~l--------~l~---------~~p~~ivIiGgG~ig~E~A~~l~~lG~-~Vtli~~~~~-l 223 (481)
T Consensus 426 r~l~IpGedl~GV~~AleFL~~~~~~~~g~~~~~~~~~i~~~GK~VvVIGGGntAmDcaRtA~RlGA~~Vt~vYRR~~~e 505 (654)
T PRK12769 426 MKAGLPNEDAPGVYDALPFLIANTKQVMGLEELPEEPFINTAGLNVVVLGGGDTAMDCVRTALRHGASNVTCAYRRDEAN 505 (654)
T ss_pred CCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCC
T ss_conf 66998997788838788889998886517755566676555575589988872469999999975998366045467234
Q ss_pred CCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHCCCCCCCC--EE---EEE-------------CCCCEEEEECCCEEECC
Q ss_conf 2222222122210012201233221001344202234310--12---440-------------36740211023224305
Q gi|254780675|r 224 LPVEDSEISQFVQRSLQKRGIKILTESKISSVKQKGDMVS--VQ---VER-------------KDGSVSSMQAEKLLLSA 285 (481)
Q Consensus 224 l~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~v~~~~~~~~--v~---~~~-------------~dG~~~~i~~D~vl~a~ 285 (481)
T Consensus 506 MPA~~~Ev----~-~A~EEGV~f~~~~~P~ei~~de~G~V~gv~~~r~~lgepD~sGRr~p~~v~gse~~i~aD~VI~Ai 580 (654)
T PRK12769 506 MPGSKKEV----K-NAREEGANFEFNVQPVALVLDEQGHVCGIRFLRTRLGEPDAQGRRRPVPIEGSEFVMPADAVIMAF 580 (654)
T ss_pred CCCCHHHH----H-HHHHCCCEEEECCCCEEEEECCCCEEEEEEEEEEEECCCCCCCCCCCEECCCCEEEEECCEEEECC
T ss_conf 99875665----5-788568789944685799977997299999999885562777876205648966999899999998
Q ss_pred CCEEEEECCCCCCCCCCCCC-EEEEECCC----CEEECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHCC
Q ss_conf 74220000232221123573-26642487----4230258588304445532444123202555543024
Q gi|254780675|r 286 GVQGNIENIGLEKIGVKTSN-GCIIVDGY----GRTNVPGIYAIGDVAGAPMLAHKAEHEGIICIEKIAG 350 (481)
Q Consensus 286 Gr~Pn~~~L~Le~~gi~~~~-g~i~vd~~----~qTs~p~IyA~GDv~g~~~l~~~A~~qg~~aa~~i~~ 350 (481)
T Consensus 581 G~~p~~~~-~~~~~gl~~~~~G~I~~d~~~~~~~~Ts~pgVFAgGD~v~G~stVV~Ai~~Gr~AA~aId~ 649 (654)
T PRK12769 581 GFNPHGMP-WLESHGVTVDKWGRIIADVESQYRYQTSNPKIFAGGDAVRGADLVVTAMAEGRHAAQGIID 649 (654)
T ss_pred CCCCCCCC-CCCCCCEEECCCCCEEECCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 89998875-3225681376999887367777654489999898078566828999999999999999999