HHsearch alignment for GI: 254780675 and conserved domain: PRK12771

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional.
Probab=97.96  E-value=1.1e-06  Score=67.47  Aligned_cols=88  Identities=14%  Similarity=0.276  Sum_probs=65.4

Q ss_pred             CCCCCCCCCCCCCCCCHHHHHCCCCCCCCEECCCCCCCC---------CCCCCCCCCCHHHHHCCCCCCCCHHHHHHCCC
Q ss_conf             444321565433210002321013331000000001222---------22221222100122012332210013442022
Q gi|254780675|r  188 PKSLIVMGSGAIGVEFSSFYKSLDVDVSLIEVKDRILPV---------EDSEISQFVQRSLQKRGIKILTESKISSVKQK  258 (481)
Q Consensus       188 p~~ivIiGgG~ig~E~A~~l~~lG~~Vtli~~~~~ll~~---------~d~~~~~~~~~~l~~~Gv~i~~~~~v~~v~~~  258 (481)
T Consensus       137 gkkVAVIGaGPAGLsaA~~La~~G~~VtVfE~~~~~GGml~~GIP~yRLP~~vl~~ei~~i~~~GV~~~~n~~vg~---d  213 (560)
T PRK12771        137 GKRVAVIGGGPAGLSAAYQLRRLGHAVTIFEAGPKLGGMMRYGIPGYRLPRDVLDAEIQRILDLGVEVKLGVRVGE---D  213 (560)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEECCEECC---C
T ss_conf             9989998977899999999997698589967678889888356875447589999999999964967983878446---5


Q ss_pred             CCCCCEEEEECCCCEEEEECCCEEECCCCE
Q ss_conf             343101244036740211023224305742
Q gi|254780675|r  259 GDMVSVQVERKDGSVSSMQAEKLLLSAGVQ  288 (481)
Q Consensus       259 ~~~~~v~~~~~dG~~~~i~~D~vl~a~Gr~  288 (481)
T Consensus       214 -----it~~~L-----~~~yDAV~la~Ga~  233 (560)
T PRK12771        214 -----ITLEQL-----EGDYDAVFVAIGAQ  233 (560)
T ss_pred             -----CCHHHH-----HCCCCEEEECCCCC
T ss_conf             -----679997-----17788899916878