HHsearch alignment for GI: 254780675 and conserved domain: PRK12778
>PRK12778 putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta; Provisional.
Probab=97.72 E-value=4.7e-06 Score=62.74 Aligned_cols=90 Identities=21% Similarity=0.339 Sum_probs=66.6
Q ss_pred CCCCCCCCCCCCCCCHHHHHCCCCCCCCEECCCCCC-------C--CCCCCCCCCCCHHHHHCCCCCCCCHHHHHHCCCC
Q ss_conf 443215654332100023210133310000000012-------2--2222212221001220123322100134420223
Q gi|254780675|r 189 KSLIVMGSGAIGVEFSSFYKSLDVDVSLIEVKDRIL-------P--VEDSEISQFVQRSLQKRGIKILTESKISSVKQKG 259 (481)
Q Consensus 189 ~~ivIiGgG~ig~E~A~~l~~lG~~Vtli~~~~~ll-------~--~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~v~~~~ 259 (481)
T Consensus 440 kKVAVIGsGPAGLsaA~~La~~G~~VtVFE~~~~~GG~L~yGIP~fRLPk~iv~~eI~~l~~lGV~~~~n~~vGkd---- 515 (760)
T PRK12778 440 IKVAVIGSGPAGLSFAGDMAKYGYDVTVFEALHEIGGVLKYGIPEFRLPNKIVDVEIENLVKMGVTFEKDCIVGKT---- 515 (760)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEEECCCEECCC----
T ss_conf 9899989778999999999977990699805888897576548611087899999999998649799899577886----
Q ss_pred CCCCEEEEECCCCEEEEECCCEEECCCC-EEE
Q ss_conf 4310124403674021102322430574-220
Q gi|254780675|r 260 DMVSVQVERKDGSVSSMQAEKLLLSAGV-QGN 290 (481)
Q Consensus 260 ~~~~v~~~~~dG~~~~i~~D~vl~a~Gr-~Pn 290 (481)
T Consensus 516 ----it~~e----L~~egyDAVfla~Ga~~pr 539 (760)
T PRK12778 516 ----ISVEE----LEEEGFKGIFVASGAGLPN 539 (760)
T ss_pred ----CCHHH----HHHCCCCEEEEECCCCCCC
T ss_conf ----89999----9758899999940678775