HHsearch alignment for GI: 254780675 and conserved domain: PRK12779
>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional.
Probab=99.97 E-value=1.6e-29 Score=233.22 Aligned_cols=278 Identities=21% Similarity=0.297 Sum_probs=187.7
Q ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEC-CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH-
Q ss_conf 489998985799999999987993999978-888624632567370889999999999984211782134875449999-
Q gi|254780675|r 6 DIILIGSGPAGYVAAIRAAQLGFKVAIVEY-AGLGGICLNWGCIPTKSLLRSAEILDHIQNAQHYGLNVAGKVEFNIED- 83 (481)
Q Consensus 6 DvvIIG~GpAG~~aA~~~a~~G~~V~liEk-~~~GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~- 83 (481)
T Consensus 308 kVAVIGsGPAGLs~A~~Lar~Gy~VTVFEalh~~GGvL-------------------------~YGI-----PeFRLPK~ 357 (944)
T PRK12779 308 PIAVVGSGPSGLINAYLLAVEGFPVTIFEAFHDLGGVL-------------------------RYGI-----PEFRLPNQ 357 (944)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEE-------------------------EECC-----CCCCCCHH
T ss_conf 67998857689999999997799339994478788558-------------------------9558-----76668789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCC-C
Q ss_conf 999999999985344687630141421000001122221002368752001355554322586389972455257543-1
Q gi|254780675|r 84 IVKRSRDISHRLNRGVEFLMHKNKVDIIWGKATLKNPSEITVSKPSQPAVQPQHPIPKKVLGEGTYKAKHIIIATGAR-P 162 (481)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~G~a~f~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~a~~ivIATGs~-p 162 (481)
T Consensus 358 IV~~EI-----------~~l~~lGV~f~~n~~--V-Gk~~tl~eL------------------~~eGydAVfIg~GAg~p 405 (944)
T PRK12779 358 LIDDVV-----------EKIKLLGGRFVKNFV--V-GKTATLEDL------------------KAEGFWKIFVGTGAGLP 405 (944)
T ss_pred HHHHHH-----------HHHHHCCEEEEECCE--E-CCCCCHHHH------------------HHCCCCEEEEEECCCCC
T ss_conf 999999-----------999967839997856--4-776889999------------------76899989997478887
Q ss_pred CCCCCCCCCCCCCCCCCCCEE---C-------------CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEECCCC-CCC
Q ss_conf 110111345554221245211---1-------------33344432156543321000232101333100000000-122
Q gi|254780675|r 163 RHIEGIEPDSHLIWTYFDALK---P-------------SKTPKSLIVMGSGAIGVEFSSFYKSLDVDVSLIEVKDR-ILP 225 (481)
Q Consensus 163 ~~~~g~~~~~~~~~t~~~~l~---l-------------~~~p~~ivIiGgG~ig~E~A~~l~~lG~~Vtli~~~~~-ll~ 225 (481)
T Consensus 406 ~~l~IpGE~L~GV~sA~EfLtrvNlm~a~~~~~~tP~~~~~GK~VvVIGGGNtAMDaARTA~RlGA~VtiVYRRt~~EMP 485 (944)
T PRK12779 406 TFMNVPGEHLLGVMSANEFLTRVNLMRGLDDRYETPLPEVKGKNVFVIGGGNTAMDAARTAKRLGGNVTIVYRRTKSEMP 485 (944)
T ss_pred CCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCHHHCC
T ss_conf 56898887776825689999986431235664568642678987999899566999999988529878999845876589
Q ss_pred CCCCCCCCCCCHHHHHCCCCCCCCHHHHHHCCCCCCCC---EE---EEEC--C----------CCEEEEECCCEEECCCC
Q ss_conf 22222122210012201233221001344202234310---12---4403--6----------74021102322430574
Q gi|254780675|r 226 VEDSEISQFVQRSLQKRGIKILTESKISSVKQKGDMVS---VQ---VERK--D----------GSVSSMQAEKLLLSAGV 287 (481)
Q Consensus 226 ~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~v~~~~~~~~---v~---~~~~--d----------G~~~~i~~D~vl~a~Gr 287 (481)
T Consensus 486 Ar~----EEi~h-A~EEGV~F~~L~~P~e~iGde~g~~v~~~~~~~MeLGEPDaSGRRrPvp~g~~e~i~~D~VI~AiG~ 560 (944)
T PRK12779 486 ARV----EELHH-ALEEGINLAVLRAPREFIGDDHTHFVTHALLDVNELGEPDKSGRRSPKPTGEIERVPVDLVIMALGN 560 (944)
T ss_pred CCH----HHHHH-HHHCCCEEEEECCCHHHEECCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCEEEECCCC
T ss_conf 889----99988-9857928998149665524468977889999985358988778978877797169777999990578
Q ss_pred EEEEECCCCCC-CCCCCCC-EEEEECC-CCEEECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHCCCC
Q ss_conf 22000023222-1123573-2664248-7423025858830444553244412320255554302466
Q gi|254780675|r 288 QGNIENIGLEK-IGVKTSN-GCIIVDG-YGRTNVPGIYAIGDVAGAPMLAHKAEHEGIICIEKIAGKS 352 (481)
Q Consensus 288 ~Pn~~~L~Le~-~gi~~~~-g~i~vd~-~~qTs~p~IyA~GDv~g~~~l~~~A~~qg~~aa~~i~~~~ 352 (481)
T Consensus 561 ~pNpl-i-~~t~p~L~~~k~G~I~vd~~t~~Ts~~gVfAGGD~vrG~aTVIlAmgdG~~AAkei~~~~ 626 (944)
T PRK12779 561 TANPI-M-KDAEPGLKTNKWGTIEVEAGSQRTSIKDVYSGGDAARGGSTAIRAAGDGQAAAKEIVGEI 626 (944)
T ss_pred CCCCC-C-CCCCCCCCCCCCCEEEECCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99951-0-136877301678519988555766777776335502456789887554599999985469