HHsearch alignment for GI: 254780675 and conserved domain: PRK13339
>PRK13339 malate:quinone oxidoreductase; Reviewed.
Probab=97.94 E-value=1.5e-05 Score=59.17 Aligned_cols=99 Identities=21% Similarity=0.355 Sum_probs=63.1
Q ss_pred CCCCCCHHHHHC-CCCCCCCHHHHHHCCCCCC-CCEEEEE-CCCCEEEEECCCEEECCCCEEEEECCCCCCCCCCCCC--
Q ss_conf 122210012201-2332210013442022343-1012440-3674021102322430574220000232221123573--
Q gi|254780675|r 231 ISQFVQRSLQKR-GIKILTESKISSVKQKGDM-VSVQVER-KDGSVSSMQAEKLLLSAGVQGNIENIGLEKIGVKTSN-- 305 (481)
Q Consensus 231 ~~~~~~~~l~~~-Gv~i~~~~~v~~v~~~~~~-~~v~~~~-~dG~~~~i~~D~vl~a~Gr~Pn~~~L~Le~~gi~~~~-- 305 (481)
T Consensus 186 LTr~l~~~l~~~~~~~v~~~~eV~~i~r~~dg~w~v~v~~~~~~~~~~~~A~fVFvGAGG~s--L~L-LQksgi~E~kgy 262 (497)
T PRK13339 186 LTRKMAKSLEAHPNAQVQYNHEVVDLERLSDGGWEVTVKDRNTGGKREQVADYVFIGAGGGA--IPL-LQKSGIPESKHL 262 (497)
T ss_pred HHHHHHHHHHHCCCEEEEECCEEEEEEECCCCCEEEEEEECCCCCEEEEEECEEEECCCHHH--HHH-HHHCCCCCCCCC
T ss_conf 99999999974898399947886321778999889999965789759999367998887377--899-998499602465
Q ss_pred -EEEEECCCCEEECCC--------CEEECCCCCCCC
Q ss_conf -266424874230258--------588304445532
Q gi|254780675|r 306 -GCIIVDGYGRTNVPG--------IYAIGDVAGAPM 332 (481)
Q Consensus 306 -g~i~vd~~~qTs~p~--------IyA~GDv~g~~~ 332 (481)
T Consensus 263 ggFPVsG~fl~~~np~iv~~H~aKVYg~a~vgaPPM 298 (497)
T PRK13339 263 GGFPISGQFLRCTNPEVVKQHQAKVYSKEPVGTPPM 298 (497)
T ss_pred CCCCCCCEEEECCCHHHHHHHHCCEECCCCCCCCCC
T ss_conf 777634568954998999875240522378997986