HHsearch alignment for GI: 254780675 and conserved domain: PTZ00318

>PTZ00318 NADH dehydrogenase; Provisional.
Probab=97.57  E-value=2.8e-05  Score=57.18  Aligned_cols=103  Identities=19%  Similarity=0.311  Sum_probs=50.2

Q ss_pred             CCCCCCCCCCCCCCCHHHHHCCCCCCCCEECCCCCC--CCC---------CCCCCCCCCHH---HHHCCCCCCCCHHHHH
Q ss_conf             443215654332100023210133310000000012--222---------22212221001---2201233221001344
Q gi|254780675|r  189 KSLIVMGSGAIGVEFSSFYKSLDVDVSLIEVKDRIL--PVE---------DSEISQFVQRS---LQKRGIKILTESKISS  254 (481)
Q Consensus       189 ~~ivIiGgG~ig~E~A~~l~~lG~~Vtli~~~~~ll--~~~---------d~~~~~~~~~~---l~~~Gv~i~~~~~v~~  254 (481)
T Consensus        11 prVVIlGgGfaGl~~ak~L~~~~~~VtLVdp~ny~lF~PLL~qvAtGtLe~r~I~~Pir~i~~~~~~~~~~f~~-~~v~~   89 (514)
T PTZ00318         11 PNVVVVGTGWAGCYFARHLNPKLANLHVLSTRNHMVFTPLLPQTTTGTLEFRSVCEPITRIQPALAKLPNRFLR-CVVYD   89 (514)
T ss_pred             CEEEEECCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCHHHEECCHHHHHHHHCCCCCEEEE-EEEEE
T ss_conf             85899997699999999738689828999999985010216766205777577222178876765136745999-99988


Q ss_pred             HCCCCCCCCEE-EEECCC------CEEEEECCCEEECCCCEEEEE
Q ss_conf             20223431012-440367------402110232243057422000
Q gi|254780675|r  255 VKQKGDMVSVQ-VERKDG------SVSSMQAEKLLLSAGVQGNIE  292 (481)
Q Consensus       255 v~~~~~~~~v~-~~~~dG------~~~~i~~D~vl~a~Gr~Pn~~  292 (481)
T Consensus        90 ID~~~k~V~~~~~~~~~~~~~~~~~~~~l~YD~LVlA~Gs~tn~F  134 (514)
T PTZ00318         90 VNFDEKQVKCVGVGVVGGSFNAPVNTFSVKYDKLILAHGARPNTF  134 (514)
T ss_pred             EEHHHCEEEEEEECCCCCCCCCCCCCCEECCCEEEECCCCCCCCC
T ss_conf             712107899974012466544445663642887898678655678