HHsearch alignment for GI: 254780675 and conserved domain: TIGR01316
>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric; InterPro: IPR006004 One pathway for the assimilation of ammonia and glutamate biosynthesis involves homotetrameric glutamate synthase (1.4.1.13 from EC) which transfers the amide group of glutamine to 2-oxoglutarate to yield two molecules of glutamate . 2 L-glutamate + NADP^+ = L-glutamine + 2-oxoglutarate + NADPH + H^+. .
Probab=100.00 E-value=9.3e-34 Score=263.99 Aligned_cols=278 Identities=27% Similarity=0.371 Sum_probs=203.4
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEEC-CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
Q ss_conf 643489998985799999999987993999978-8886246325673708899999999999842117821348754499
Q gi|254780675|r 3 RLYDIILIGSGPAGYVAAIRAAQLGFKVAIVEY-AGLGGICLNWGCIPTKSLLRSAEILDHIQNAQHYGLNVAGKVEFNI 81 (481)
Q Consensus 3 ~~yDvvIIG~GpAG~~aA~~~a~~G~~V~liEk-~~~GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~ 81 (481)
T Consensus 141 t~~kVAViGaGPAGL~cA~elAk~Gh~VtvfEALhKPGGV-~~------------------------YGI-----PefRL 190 (462)
T TIGR01316 141 TKKKVAVIGAGPAGLACASELAKKGHEVTVFEALHKPGGV-LA------------------------YGI-----PEFRL 190 (462)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCCE-EE------------------------ECC-----CCCCC
T ss_conf 8877999846821468899997479869999714899856-75------------------------368-----88548
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCC
Q ss_conf 99-99999999998534468763014142100000112222100236875200135555432258638997245525754
Q gi|254780675|r 82 ED-IVKRSRDISHRLNRGVEFLMHKNKVDIIWGKATLKNPSEITVSKPSQPAVQPQHPIPKKVLGEGTYKAKHIIIATGA 160 (481)
Q Consensus 82 ~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~G~a~f~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~a~~ivIATGs 160 (481)
T Consensus 191 pKei~~~---E~--------k~LkklGv~fr~~~--lvG-kt~TL~eL-----------------~~~YGfDAVFIgtGA 239 (462)
T TIGR01316 191 PKEIVET---EV--------KKLKKLGVKFRTDY--LVG-KTVTLEEL-----------------LEKYGFDAVFIGTGA 239 (462)
T ss_pred CHHHHHH---HH--------HHHHHCCEEEEECC--EEC-CCHHHHHH-----------------HHHCCCCEEEEEECC
T ss_conf 7578898---88--------87632663799443--750-51128888-----------------875197079995068
Q ss_pred -CCC--CCCCCCCCCCCCCCCCCCE------ECCCC-----C----CCCCCCCCCCCCCCCHHHHHCCCCC-CCCEECCC
Q ss_conf -311--1011134555422124521------11333-----4----4432156543321000232101333-10000000
Q gi|254780675|r 161 -RPR--HIEGIEPDSHLIWTYFDAL------KPSKT-----P----KSLIVMGSGAIGVEFSSFYKSLDVD-VSLIEVKD 221 (481)
Q Consensus 161 -~p~--~~~g~~~~~~~~~t~~~~l------~l~~~-----p----~~ivIiGgG~ig~E~A~~l~~lG~~-Vtli~~~~ 221 (481)
T Consensus 240 G~pkl~NipG~~L--~gvysA~dfLtR~nLmKAyefp~~dtPv~~gK~vvviGgGntAvD~artAlRLGaEqvh~~YRrt 317 (462)
T TIGR01316 240 GLPKLLNIPGEEL--KGVYSANDFLTRVNLMKAYEFPKKDTPVEVGKKVVVIGGGNTAVDAARTALRLGAEQVHVVYRRT 317 (462)
T ss_pred CCCEECCCCCHHH--CCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECC
T ss_conf 9870016784343--40022346887777765423667887565447689987853678777666452842369988547
Q ss_pred CCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHCCCCCCCC--EEEEECC----------------CCEEEEECCCEEE
Q ss_conf 012222222122210012201233221001344202234310--1244036----------------7402110232243
Q gi|254780675|r 222 RILPVEDSEISQFVQRSLQKRGIKILTESKISSVKQKGDMVS--VQVERKD----------------GSVSSMQAEKLLL 283 (481)
Q Consensus 222 ~ll~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~v~~~~~~~~--v~~~~~d----------------G~~~~i~~D~vl~ 283 (481)
T Consensus 318 R----edmtAr~EEi~ha~eEGVkfhfl~Qpve~iGdE~G~V~avkf~~~~~~E~~dsg~~r~~p~~~~e~~leaD~VI~ 393 (462)
T TIGR01316 318 R----EDMTAREEEIKHAEEEGVKFHFLLQPVEVIGDEEGEVKAVKFEKTELLEERDSGEKRKVPVTDEEVKLEADAVIV 393 (462)
T ss_pred C----CCCHHHHHHHHHHHHCCCEEEEEECCEEEEECCCCEEEEEEEEECCCCCHHHCCCCEEEECCCCCEEEEECEEEE
T ss_conf 7----751366999998853892899874216898657651899998853768811457812430499517886265999
Q ss_pred CCCCEEEEECCCCCCC-CCCCC-CEEEEECCCCEEECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHC
Q ss_conf 0574220000232221-12357-326642487423025858830444553244412320255554302
Q gi|254780675|r 284 SAGVQGNIENIGLEKI-GVKTS-NGCIIVDGYGRTNVPGIYAIGDVAGAPMLAHKAEHEGIICIEKIA 349 (481)
Q Consensus 284 a~Gr~Pn~~~L~Le~~-gi~~~-~g~i~vd~~~qTs~p~IyA~GDv~g~~~l~~~A~~qg~~aa~~i~ 349 (481)
T Consensus 394 AiG~~~Np--i~~e~~r~lkt~~~GTIvVdE~~~TsipGVfAGGD~i~G~atVi~Amg~GkrAAk~I~ 459 (462)
T TIGR01316 394 AIGQEANP--IIAEDSRSLKTSKRGTIVVDEDLETSIPGVFAGGDVIRGEATVILAMGDGKRAAKAID 459 (462)
T ss_pred EECCCCCC--EEEECCCEEEECCCCCEEECCCCCCCCCCEEECCCEEECCCEEEEECCCCHHHHHHHH
T ss_conf 74589883--0330673333458865787476304767574267277458669985003568999874