HHsearch alignment for GI: 254780675 and conserved domain: TIGR01350
>TIGR01350 lipoamide_DH dihydrolipoamide dehydrogenase; InterPro: IPR006258 These sequences represent dihydrolipoamide dehydrogenase, a flavoprotein that acts in a number of ways. It is the E3 component of dehydrogenase complexes for pyruvate, 2-oxoglutarate, 2-oxoisovalerate, and acetoin. It can also serve as the L protein of the glycine cleavage system. This family includes a few members known to have distinct functions (ferric leghemoglobin reductase and NADH:ferredoxin oxidoreductase) but that may be predicted by homology to act as dihydrolipoamide dehydrogenase as well. The motif GGXCXXXGCXP near the N-terminus contains a redox-active disulphide. ; GO: 0004148 dihydrolipoyl dehydrogenase activity, 0050660 FAD binding, 0006118 electron transport.
Probab=97.81 E-value=0.00019 Score=51.13 Aligned_cols=95 Identities=26% Similarity=0.403 Sum_probs=61.7
Q ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEEC-CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
Q ss_conf 89998985799999999987993999978-88862463256737088999999999998421178213487544999999
Q gi|254780675|r 7 IILIGSGPAGYVAAIRAAQLGFKVAIVEY-AGLGGICLNWGCIPTKSLLRSAEILDHIQNAQHYGLNVAGKVEFNIEDIV 85 (481)
Q Consensus 7 vvIIG~GpAG~~aA~~~a~~G~~V~liEk-~~~GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 85 (481)
T Consensus 181 lvIiGGGVIG~EfA~~f~~lG~~VTv~E~~drI-----------------------------------L--p~~D----- 218 (481)
T TIGR01350 181 LVIIGGGVIGVEFASIFASLGVKVTVIEMLDRI-----------------------------------L--PGED----- 218 (481)
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC-----------------------------------C--CCCC-----
T ss_conf 699878667788999998539808999457500-----------------------------------3--5431-----
Q ss_pred HHHHHHHHHHHHHHHHHHHCCC-EEEECCCCCC-----CCCCCCC--CCCCCCCCCCCCCCCCCCCCCC-EEEEEEEEEE
Q ss_conf 9999999985344687630141-4210000011-----2222100--2368752001355554322586-3899724552
Q gi|254780675|r 86 KRSRDISHRLNRGVEFLMHKNK-VDIIWGKATL-----KNPSEIT--VSKPSQPAVQPQHPIPKKVLGE-GTYKAKHIII 156 (481)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~-v~~~~G~a~f-----~~~~~v~--v~~~~~~~~~~~~~~~~~~~~~-~~~~a~~ivI 156 (481)
T Consensus 219 -------~evSk~~~~~L~~~GNv~i~~~~~V~~~~~~~~~~~v~~~~~~~g--------------~ge~~~~~~e~vLv 277 (481)
T TIGR01350 219 -------AEVSKVVKKKLKKKGNVKILTNAKVTGAAVEKNDDQVVVEVELEG--------------KGEVETLTAEKVLV 277 (481)
T ss_pred -------HHHHHHHHHHHHHCCCEEEECCCEEECCEEEECCCEEEEEEEECC--------------CCCEEEEEEEEEEE
T ss_conf -------689999999997449849854854423357752878999999879--------------98058898739999
Q ss_pred CCCCCCCC
Q ss_conf 57543111
Q gi|254780675|r 157 ATGARPRH 164 (481)
Q Consensus 157 ATGs~p~~ 164 (481)
T Consensus 278 avGR~pn~ 285 (481)
T TIGR01350 278 AVGRKPNT 285 (481)
T ss_pred EECCCCCC
T ss_conf 84243476