HHsearch alignment for GI: 254780675 and conserved domain: TIGR01377
>TIGR01377 soxA_mon sarcosine oxidase, monomeric form; InterPro: IPR006281 This set of sequences describe the alpha subunit of a family of known and putative heterotetrameric sarcosine oxidases. Five operons of such oxidases are found in Mesorhizobium loti and three in Agrobacterium tumefaciens, a high enough copy number to suggest that not all members share the same function. Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate . Bacterial sarcosine oxidases have been isolated from over a dozen different organisms and fall into two major classes (1) monomeric form that contains only covalent flavin and (2) heterotetrameric (alpha, beta, gamma, delta) form that contain a covalent and noncovalent flavin, this entry represents the monomeric form.; GO: 0008115 sarcosine oxidase activity, 0046653 tetrahydrofolate metabolic process.
Probab=97.49 E-value=0.00013 Score=52.30 Aligned_cols=82 Identities=24% Similarity=0.388 Sum_probs=53.4
Q ss_pred CCCEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHCCCC--CCCCEEEEECCCCEEEEECCCEEECCCCEEEE
Q ss_conf 1000000001222222212221001220123322100134420223--43101244036740211023224305742200
Q gi|254780675|r 214 VSLIEVKDRILPVEDSEISQFVQRSLQKRGIKILTESKISSVKQKG--DMVSVQVERKDGSVSSMQAEKLLLSAGVQGNI 291 (481)
Q Consensus 214 Vtli~~~~~ll~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~v~~~~--~~~~v~~~~~dG~~~~i~~D~vl~a~Gr~Pn~ 291 (481)
T Consensus 135 ~g~~~~~gGvl~--~~ka~~a~q~l~~~~Ga~v~d~~kV~~i~~~GesGe~~vt~kt~~---~sy~a~~lvvtaG--aW~ 207 (401)
T TIGR01377 135 VGLLDELGGVLY--AEKALRALQELAEAHGAIVRDGTKVVEIKPDGESGELLVTVKTTK---DSYQAKKLVVTAG--AWT 207 (401)
T ss_pred EEEEECCCCEEC--HHHHHHHHHHHHHHCCCEEECCCEEEEEEECCCCCCCEEEEEEEC---CEEECCEEEEECC--CCH
T ss_conf 788746887462--278999999999874968734860366542676789548999727---7032135789538--861
Q ss_pred -ECCCCCCCC-CCC
Q ss_conf -002322211-235
Q gi|254780675|r 292 -ENIGLEKIG-VKT 303 (481)
Q Consensus 292 -~~L~Le~~g-i~~ 303 (481)
T Consensus 208 s~kL-l~~l~Gie~ 220 (401)
T TIGR01377 208 SNKL-LKKLGGIEL 220 (401)
T ss_pred HHHH-CCCCCCEEC
T ss_conf 2343-130142326