HHsearch alignment for GI: 254780675 and conserved domain: TIGR01813
>TIGR01813 flavo_cyto_c flavocytochrome c; InterPro: IPR010960 This entry describes a family of redox proteins related to the succinate dehydrogenases and fumarate reductases of Escherichia coli, mitochondria, and other well-characterised systems. A member of this family from Shewanella frigidimarina NCIMB400 is characterised as a water-soluble periplasmic protein with four haem groups, a non-covalently bound FAD, and essentially unidirectional fumarate reductase activity. At least seven distinct members of this family are found in Shewanella oneidensis, a species able to use a wide variety of pathways for respiration.; GO: 0000104 succinate dehydrogenase activity.
Probab=98.88 E-value=1.8e-08 Score=80.31 Aligned_cols=36 Identities=39% Similarity=0.658 Sum_probs=33.6
Q ss_pred CEEEECCCHHHHHHHHHHHHCC-CCEEEEECCC-CCEE
Q ss_conf 4899989857999999999879-9399997888-8624
Q gi|254780675|r 6 DIILIGSGPAGYVAAIRAAQLG-FKVAIVEYAG-LGGI 41 (481)
Q Consensus 6 DvvIIG~GpAG~~aA~~~a~~G-~~V~liEk~~-~GGt 41 (481)
T Consensus 1 dvvvvGSG~AGlsAA~~A~~~G~~~vv~LEK~~~iGGN 38 (487)
T TIGR01813 1 DVVVVGSGFAGLSAALSAKKAGLANVVVLEKMPVIGGN 38 (487)
T ss_pred CEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCHH
T ss_conf 96898427688999999986468763787057523226