HHsearch alignment for GI: 254780675 and conserved domain: TIGR02730
>TIGR02730 carot_isom carotene isomerase; InterPro: IPR014101 Members of this family, including sll0033 (crtH) of Synechocystis sp. (strain PCC 6803), catalyse a cis-trans isomerization of carotenes to the all-trans lycopene, a reaction that can also occur non-enzymatically in light through photoisomerization..
Probab=97.18 E-value=0.00041 Score=48.66 Aligned_cols=36 Identities=47% Similarity=0.633 Sum_probs=33.0
Q ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECCC-CCE
Q ss_conf 348999898579999999998799399997888-862
Q gi|254780675|r 5 YDIILIGSGPAGYVAAIRAAQLGFKVAIVEYAG-LGG 40 (481)
Q Consensus 5 yDvvIIG~GpAG~~aA~~~a~~G~~V~liEk~~-~GG 40 (481)
T Consensus 1 yDaiVIGSGIGGLVtAtQLa~KGakvLVLE~Y~IPGG 37 (506)
T TIGR02730 1 YDAIVIGSGIGGLVTATQLAAKGAKVLVLERYLIPGG 37 (506)
T ss_pred CCEEEEECCCHHHHHHHHHHHCCCEEEEEEEEECCCC
T ss_conf 9478981683178999999854622553220114788