HHsearch alignment for GI: 254780675 and conserved domain: TIGR02733

>TIGR02733 desat_CrtD C-3',4' desaturase CrtD; InterPro: IPR014104 Members of this family are encoded by slr1293, a carotenoid biosynthesis protein which was shown to be the C-3',4' desaturase (CrtD) of myxoxanthophyll biosynthesis in Synechocystis sp. (strain PCC 6803), and close homologues (presumed to be functionally equivalent) from other cyanobacteria, where myxoxanthophyll biosynthesis is either known or expected. This enzyme can act on neurosporene and so presumably catalyses the first step that is committed to myxoxanthophyll..
Probab=97.82  E-value=2.4e-05  Score=57.65  Aligned_cols=146  Identities=18%  Similarity=0.252  Sum_probs=80.9

Q ss_pred             CCCCCCCCHHHHHCCCCCCCCHHHHHHCCCCCC--CCEEEEECCCCEEEEECCCEEECCCCEEEEECCCCCCCCCC--CC
Q ss_conf             221222100122012332210013442022343--10124403674021102322430574220000232221123--57
Q gi|254780675|r  229 SEISQFVQRSLQKRGIKILTESKISSVKQKGDM--VSVQVERKDGSVSSMQAEKLLLSAGVQGNIENIGLEKIGVK--TS  304 (481)
Q Consensus       229 ~~~~~~~~~~l~~~Gv~i~~~~~v~~v~~~~~~--~~v~~~~~dG~~~~i~~D~vl~a~Gr~Pn~~~L~Le~~gi~--~~  304 (481)
T Consensus       232 Q~LSD~L~~al~~~GG~l~~gqrV~~I~~~~~~~~~~~v~~~r~~~~~~~~A~d~V~~lP----pq~L-L~l~~~~~~~~  306 (499)
T TIGR02733       232 QVLSDRLVEALKRDGGRLLTGQRVTAIETKGGRAGWVVVVDSRKQEDEQVKADDVVANLP----PQSL-LELLGSELALP  306 (499)
T ss_pred             HHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHCCEEECC----HHHH-HHHCCCCCCCC
T ss_conf             357899999998679879860023234431684156887416411467744203120077----4116-87668766666


Q ss_pred             CEEEEECCCCE-EECC-C---CEEE-------CCCCCCCCCCCCCCCCHHHHHHHHCCCCC------CCCCCCCCCEEEE
Q ss_conf             32664248742-3025-8---5883-------04445532444123202555543024664------4321223200245
Q gi|254780675|r  305 NGCIIVDGYGR-TNVP-G---IYAI-------GDVAGAPMLAHKAEHEGIICIEKIAGKSK------VYPLDKSKIPGCT  366 (481)
Q Consensus       305 ~g~i~vd~~~q-Ts~p-~---IyA~-------GDv~g~~~l~~~A~~qg~~aa~~i~~~~~------~~~~d~~~ip~~v  366 (481)
T Consensus       307 ~~Yr---~Rl~~LP~pSGA~V~Y~gvk~~alP~~cp~HlQf~~--D~~GP~gENNSLFVSiS~egDGRAP~G~~TlIAS~  381 (499)
T TIGR02733       307 PGYR---KRLKKLPEPSGAFVLYLGVKRAALPVDCPPHLQFLS--DHQGPIGENNSLFVSISQEGDGRAPAGEATLIASS  381 (499)
T ss_pred             HHHH---HHHHHCCCCCCEEEEEECCCHHHCCCCCCCCCEEEC--CCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEE
T ss_conf             1479---999727788972886000133337777878604500--78888200364027865786888775753678742


Q ss_pred             EEEHHHEEECCCHHHHHCC
Q ss_conf             4303340001496876107
Q gi|254780675|r  367 YCNPQVASIGLTEEKARSQ  385 (481)
Q Consensus       367 ft~P~ia~vG~te~ea~~~  385 (481)
T Consensus       382 FTd~~-~W~~l~~~~Y~~~  399 (499)
T TIGR02733       382 FTDVA-DWSSLDEEDYTAK  399 (499)
T ss_pred             CCCCH-HHCCCCHHHHHHH
T ss_conf             13712-2117726789999