HHsearch alignment for GI: 254780675 and conserved domain: TIGR03378
>TIGR03378 glycerol3P_GlpB glycerol-3-phosphate dehydrogenase, anaerobic, B subunit. Members of this protein family are the B subunit, product of the glpB gene, of a three-subunit, membrane-anchored, FAD-dependent anaerobic glycerol-3-phosphate dehydrogenase.
Probab=99.39 E-value=4.9e-12 Score=106.21 Aligned_cols=139 Identities=15% Similarity=0.213 Sum_probs=87.8
Q ss_pred HCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHCCCCCCCCEEEEECCCCEEEEECCCEEECCCC
Q ss_conf 10133310000000012222222122210012201233221001344202234310124403674021102322430574
Q gi|254780675|r 208 KSLDVDVSLIEVKDRILPVEDSEISQFVQRSLQKRGIKILTESKISSVKQKGDMVSVQVERKDGSVSSMQAEKLLLSAGV 287 (481)
Q Consensus 208 ~~lG~~Vtli~~~~~ll~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~v~~~~~~~~v~~~~~dG~~~~i~~D~vl~a~Gr 287 (481)
T Consensus 244 ~~lg~~v~EvPtlPPSvpG--~RL~~~L~~~f~~~Gg~~~~g~~V~~~~~~~~~v~~v~t-~~~~~~~~~A~~~VLATGs 320 (419)
T TIGR03378 244 QATGLTLCELPTMPPSLLG--IRLEEALKHRFEQLGGVMLPGDRVLRAEFEGNRVTRIHT-RNHRDIPLRADHFVLASGS 320 (419)
T ss_pred HHHCCCEEECCCCCCCCHH--HHHHHHHHHHHHHCCCEEECCCEEEEEEEECCEEEEEEE-CCCCCEEEECCEEEECCCC
T ss_conf 9889888988999998377--999999999999869789669979989987998999993-3787226505769991466
Q ss_pred EE------EEEC-----CCCCCCCCC----C-----------CCEEEEECCCCEEE-----CCCCEEECCCCCCCCCCC-
Q ss_conf 22------0000-----232221123----5-----------73266424874230-----258588304445532444-
Q gi|254780675|r 288 QG------NIEN-----IGLEKIGVK----T-----------SNGCIIVDGYGRTN-----VPGIYAIGDVAGAPMLAH- 335 (481)
Q Consensus 288 ~P------n~~~-----L~Le~~gi~----~-----------~~g~i~vd~~~qTs-----~p~IyA~GDv~g~~~l~~- 335 (481)
T Consensus 321 F~s~GL~a~~~~i~Epif~LdV~~~~~R~~W~~~~ff~~qp~~~~GV~tD~~lrp~~~g~~~~NLya~GsvL~G~d~~~e 400 (419)
T TIGR03378 321 FFSNGLVAEFDKIYEPIFGLDVLQLPDRDQWYQHRFFAPHPFMQFGVKTDAQLRPSRGGQTIENLYAIGAVLGGYDPIFE 400 (419)
T ss_pred CCCCCEECCCCCEEEECCCCCCCCCCCHHHCCCCCCCCCCHHHHCCCEECCCCCCCCCCCCCCCEEEECHHHCCCCHHHH
T ss_conf 54698853689765205699889988756602303568880133286788777835678345650672312318876773
Q ss_pred -----CCCCCHHHHHHHHC
Q ss_conf -----12320255554302
Q gi|254780675|r 336 -----KAEHEGIICIEKIA 349 (481)
Q Consensus 336 -----~A~~qg~~aa~~i~ 349 (481)
T Consensus 401 gcG~GVai~Ta~~Aa~~I~ 419 (419)
T TIGR03378 401 GCGSGVAVSTALHAAEQII 419 (419)
T ss_pred CCCCHHHHHHHHHHHHHHC
T ss_conf 7773399999999999649