HHsearch alignment for GI: 254780675 and conserved domain: pfam06039
>pfam06039 Mqo Malate:quinone oxidoreductase (Mqo). This family consists of several bacterial Malate:quinone oxidoreductase (Mqo) proteins (EC:1.1.99.16). Mqo takes part in the citric acid cycle. It oxidizes L-malate to oxaloacetate and donates electrons to ubiquinone-1 and other artificial acceptors or, via the electron transfer chain, to oxygen. NAD is not an acceptor and the natural direct acceptor for the enzyme is most likely a quinone. The enzyme is therefore called malate:quinone oxidoreductase, abbreviated to Mqo. Mqo is a peripheral membrane protein and can be released from the membrane by addition of chelators.
Probab=98.15 E-value=8.2e-06 Score=61.01 Aligned_cols=85 Identities=20% Similarity=0.361 Sum_probs=57.0
Q ss_pred CCCCCHHHHH-CCCCCCCCHHHHHHCCCCCC-CCEEEEE-CCCCEEEEECCCEEECCCCEEEEECCC-CCCCCCCCCC--
Q ss_conf 2221001220-12332210013442022343-1012440-367402110232243057422000023-2221123573--
Q gi|254780675|r 232 SQFVQRSLQK-RGIKILTESKISSVKQKGDM-VSVQVER-KDGSVSSMQAEKLLLSAGVQGNIENIG-LEKIGVKTSN-- 305 (481)
Q Consensus 232 ~~~~~~~l~~-~Gv~i~~~~~v~~v~~~~~~-~~v~~~~-~dG~~~~i~~D~vl~a~Gr~Pn~~~L~-Le~~gi~~~~-- 305 (481)
T Consensus 185 T~~l~~~l~~~~~~~l~~~~eV~~i~r~~dg~w~v~v~~~~~~~~~~~~A~fVfvgAGG~----sL~LlQksgi~e~~~y 260 (489)
T pfam06039 185 TRQLFKYLQQKPNVELQYNHEVRDIKRNSDGTWTVTVKDLNTGDKRTIKAKFVFIGAGGG----ALPLLQKSGIPESKGY 260 (489)
T ss_pred HHHHHHHHHHCCCEEEEECCEEEEEEECCCCCEEEEEEECCCCCEEEEEECEEEECCCHH----HHHHHHHCCCHHHCCC
T ss_conf 999999985189828992788534588899987999986578974899826799888757----7899998198332363
Q ss_pred -EEEEECCCCEEECCC
Q ss_conf -266424874230258
Q gi|254780675|r 306 -GCIIVDGYGRTNVPG 320 (481)
Q Consensus 306 -g~i~vd~~~qTs~p~ 320 (481)
T Consensus 261 ggfPVsG~fl~~~np~ 276 (489)
T pfam06039 261 GGFPVSGQFLRCTNPE 276 (489)
T ss_pred CCCCCCCEEEECCCHH
T ss_conf 6677555688539989