HHsearch alignment for GI: 254780675 and conserved domain: pfam07992

>pfam07992 Pyr_redox_2 Pyridine nucleotide-disulphide oxidoreductase. This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Probab=100.00  E-value=6e-39  Score=301.70  Aligned_cols=272  Identities=36%  Similarity=0.545  Sum_probs=194.3

Q ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
Q ss_conf             48999898579999999998799399997888862463256737088999999999998421178213487544999999
Q gi|254780675|r    6 DIILIGSGPAGYVAAIRAAQLGFKVAIVEYAGLGGICLNWGCIPTKSLLRSAEILDHIQNAQHYGLNVAGKVEFNIEDIV   85 (481)
Q Consensus         6 DvvIIG~GpAG~~aA~~~a~~G~~V~liEk~~~GGtC~~~GCiPsK~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~   85 (481)
T Consensus         1 DVvIIGgG~AGl~aA~~l~~~g~~v~lid~~--~~~~~~~~~i~~~~~~~~~~-----------------~~~~~~~~~-   60 (277)
T pfam07992         1 DVVIIGGGPAGLAAAIYLARLGLKVALIEKE--GGTCYNRGCIPKKLLLEAAE-----------------VGKLDLRPL-   60 (277)
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEECC--CCCEEEECCCCCCCCCCCCC-----------------HHHHHHHHH-
T ss_conf             9999997699999999998499979999379--99357557747711645433-----------------145618999-


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCEEEECCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCC
Q ss_conf             99999999853446876301414210000-01122221002368752001355554322586389972455257543111
Q gi|254780675|r   86 KRSRDISHRLNRGVEFLMHKNKVDIIWGK-ATLKNPSEITVSKPSQPAVQPQHPIPKKVLGEGTYKAKHIIIATGARPRH  164 (481)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~v~~~~G~-a~f~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~a~~ivIATGs~p~~  164 (481)
T Consensus        61 ---------------~~~~~~~i~~~~~~~v~~i~~~~~~v~----------------~~~g~~~~~d~lviAtG~~~~~  109 (277)
T pfam07992        61 ---------------EQYKDEGIEVLLGTGVTAIDKAGKKVT----------------LDDGKELTYDKLVIATGARPRR  109 (277)
T ss_pred             ---------------HHHHHCCCEEEECCEEEEEECCCCEEE----------------ECCCCEEECCEEEECCCCCCCC
T ss_conf             ---------------999875979996877999978999899----------------8789399859999987998622


Q ss_pred             C--CCCCCCCCCCCCCCCCEECCCCC-CCCCCCCCCCCCCCCHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             0--11134555422124521113334-44321565433210002321013331000000001222222212221001220
Q gi|254780675|r  165 I--EGIEPDSHLIWTYFDALKPSKTP-KSLIVMGSGAIGVEFSSFYKSLDVDVSLIEVKDRILPVEDSEISQFVQRSLQK  241 (481)
Q Consensus       165 ~--~g~~~~~~~~~t~~~~l~l~~~p-~~ivIiGgG~ig~E~A~~l~~lG~~Vtli~~~~~ll~~~d~~~~~~~~~~l~~  241 (481)
T Consensus       110 ~~ipG~~~~~~~~~~~~~~~~~~~~~~~~v~VvGgG~~g~e~A~~l~~~g~~Vtli~~~~~~~~~~~~~~~~~~~~~~~~  189 (277)
T pfam07992       110 PPIPGVELDGVFYLTSDDALALREKPKKRVVVVGGGYIGLELAAALAKLGAEVTVVERRDRLLARADDEIRAALLEKLEE  189 (277)
T ss_pred             CCCCCCCCCCCEECCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHH
T ss_conf             57787444562323699998756174566999799875999999999729937999865723444478999999999997


Q ss_pred             CCCCCCCCHHHHHHCCCCCCCCEEEEECCCCEEEEECCCEEECCCCEEEEECCCCCCCCCCCC-CEEEEECCCCEEECCC
Q ss_conf             123322100134420223431012440367402110232243057422000023222112357-3266424874230258
Q gi|254780675|r  242 RGIKILTESKISSVKQKGDMVSVQVERKDGSVSSMQAEKLLLSAGVQGNIENIGLEKIGVKTS-NGCIIVDGYGRTNVPG  320 (481)
Q Consensus       242 ~Gv~i~~~~~v~~v~~~~~~~~v~~~~~dG~~~~i~~D~vl~a~Gr~Pn~~~L~Le~~gi~~~-~g~i~vd~~~qTs~p~  320 (481)
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~g~~~~~~--~~~~~gl~~~~~G~I~vd~~~~Ts~~~  265 (277)
T pfam07992       190 LGGVIVLLAKVEVVVEVVEGVVVKV--VLEDGIEADADLVAIGRGPNPNTL--LLEKAGLELDERGYIVVDEYLRTSVPG  265 (277)
T ss_pred             HCCEEEEEEEEEEEEECCEEEEEEC--CCCEEEEEEEEEEEEEEEECCCCC--HHHHCCCCCCCCCCEEECCCCEECCCC
T ss_conf             3989999667889883003689860--565279970899999974158951--377779248899958679297409999


Q ss_pred             CEEECCCCCCCC
Q ss_conf             588304445532
Q gi|254780675|r  321 IYAIGDVAGAPM  332 (481)
Q Consensus       321 IyA~GDv~g~~~  332 (481)
T Consensus       266 VyA~GDva~g~~  277 (277)
T pfam07992       266 IYAAGDVAEGRP  277 (277)
T ss_pred             EEEEEECCCCCC
T ss_conf             999886889999