HHsearch alignment for GI: 254780676 and conserved domain: PRK05481

>PRK05481 lipoyl synthase; Provisional.
Probab=100.00  E-value=0  Score=1000.37  Aligned_cols=283  Identities=64%  Similarity=1.036  Sum_probs=278.4

Q ss_pred             CCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf             88898824500179986689999999974982365257887876750897269998665223535223446789988882
Q gi|254780676|r   36 EKMQKPDWIRVRAPVSSGYKETYNILRSRNLTTVCEEAGCPNIGECWNKNHATFMILGAICTRACTFCNVATGKPQPLDP  115 (329)
Q Consensus        36 ~~~~kP~Wlk~~~p~~~~~~~~~~~l~~~~L~TVCeeA~CPNi~ECw~~gtATFMilG~~CTR~C~FC~V~~G~P~~~D~  115 (329)
T Consensus         2 ~~~rkP~Wlkvk~p~~~~~~~~k~~l~~~~L~TVCeeA~CPNi~ECw~~gTATFMIlG~~CTR~C~FC~V~tG~P~~~D~   81 (289)
T PRK05481          2 EILRKPDWLRVKLPTGERYTETKALLRENGLHTVCEEASCPNIGECWSHGTATFMILGDICTRRCPFCDVATGRPLPLDP   81 (289)
T ss_pred             CCCCCCHHEEECCCCCCHHHHHHHHHHHCCCEEEECCCCCCCHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             98879653176389984199999999977992555788999738875998506776578765788774078899898870


Q ss_pred             HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHH-HHHHHHHCCCHHHHH
Q ss_conf             3579999999970775189850544534532589999999999853358689981546234468-999874107023320
Q gi|254780676|r  116 QEPENISWAVRSMKLSHVVITSVDRDDLDDGGAQHFAEVISAIRESAPSTTIEVLTPDFLRKPH-ALEKVVSAKPDVFNH  194 (329)
Q Consensus       116 ~EP~rvA~av~~l~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~IEvLiPDf~G~~~-al~~v~~A~pdV~nH  194 (329)
T Consensus        82 ~EP~~vA~av~~m~Lk~vViTSV~RDDL~DgGA~hfa~~I~~Ir~~~P~~~iEvLiPDF~G~~~~~l~~v~~a~PdV~nH  161 (289)
T PRK05481         82 DEPERVAEAVARMGLKYVVITSVDRDDLPDGGAQHFAETIRAIRELSPGTTIEVLIPDFRGRKDAALEIVVAAPPDVFNH  161 (289)
T ss_pred             HHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHCCHHHHHC
T ss_conf             30799999999828976999634166665655499999999998559997799707211469999999998567177643


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECHHHHHHHHHHHHHCCCCEEECCHHCCCCCCCC
Q ss_conf             13830002756389703589999999999708916701404887642068899999999966993997502227861007
Q gi|254780676|r  195 NLETVASNYLMVRPGARYFHSLRLLQRVKELDPLIFTKSGIMLGLGETRNEILQLMDDLRTADVDFLTMGQYLQPTRKHH  274 (329)
Q Consensus       195 NiETV~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~i~TKSGlMvGLGEt~eEi~e~l~DLr~~gvdilTiGQYL~Ps~~h~  274 (329)
T Consensus       162 NiETV~rL~~~VRp~a~Y~rSL~vL~~~k~~~p~~~TKSgiMvGLGEt~eEv~~~~~DL~~~gvdilTiGQYL~Ps~~hl  241 (289)
T PRK05481        162 NLETVPRLYKRVRPGADYERSLELLKRAKELDPGIPTKSGLMVGLGETDEEVLEVMDDLRAHGVDILTIGQYLQPSRKHL  241 (289)
T ss_pred             CHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC
T ss_conf             51310443623388233899999999999748998241356775578899999999999981998998340358886668


Q ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHH
Q ss_conf             80002384699999999997496243404830010318999999
Q gi|254780676|r  275 KVESFVTPQDFKSYETIAYSKGFLMVSASPLTRSSYHAGDDFLR  318 (329)
Q Consensus       275 pV~ryv~P~eF~~~~~~a~~~Gf~~V~SgPlVRSSY~A~e~~~~  318 (329)
T Consensus       242 pV~ryv~P~eF~~~~~~a~~~GF~~V~SgPlVRSSY~A~~~~~~  285 (289)
T PRK05481        242 PVERYVTPEEFDEYKEIALELGFLHVASGPLVRSSYHADEQFKG  285 (289)
T ss_pred             CCEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHH
T ss_conf             84335698999999999997599679823740020426899866