HHsearch alignment for GI: 254780676 and conserved domain: PRK05628
>PRK05628 coproporphyrinogen III oxidase; Validated.
Probab=98.10 E-value=0.00045 Score=50.34 Aligned_cols=211 Identities=16% Similarity=0.255 Sum_probs=138.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHH-HHHH--------HHHHHHHCCCEEEEECCCCCCCCCCH------HHHHHHHHHHH
Q ss_conf 522353522344678998888235-7999--------99999707751898505445345325------89999999999
Q gi|254780676|r 94 AICTRACTFCNVATGKPQPLDPQE-PENI--------SWAVRSMKLSHVVITSVDRDDLDDGG------AQHFAEVISAI 158 (329)
Q Consensus 94 ~~CTR~C~FC~V~~G~P~~~D~~E-P~rv--------A~av~~l~Lk~vViTSV~RDDL~DgG------A~hfa~~I~~I 158 (329)
T Consensus 10 PFC~~~C~yC~f~~~~~~~~~~~~~~~~Y~~~L~~Ei~~~~~~l~~~~~~i~tiy----~GGGTPs~L~~~~l~~l~~~i 85 (376)
T PRK05628 10 PFCATRCGYCDFNTYTAAELGGGASPDGYLDALRAELELAAAVLGDPAPPVSTVF----VGGGTPSLLGAEGLARVLDAV 85 (376)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE----ECCCHHHHCCHHHHHHHHHHH
T ss_conf 5764608999795733652478767999999999999999876177896578999----789446648999999999999
Q ss_pred HHHC-----CCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHCCCE-EEE
Q ss_conf 8533-----5868998154623446899987410702332013830-00275638970358999999999970891-670
Q gi|254780676|r 159 RESA-----PSTTIEVLTPDFLRKPHALEKVVSAKPDVFNHNLETV-ASNYLMVRPGARYFHSLRLLQRVKELDPL-IFT 231 (329)
Q Consensus 159 r~~~-----P~~~IEvLiPDf~G~~~al~~v~~A~pdV~nHNiETV-~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~-i~T 231 (329)
T Consensus 86 ~~~f~~~~~~EiTiE~n-P~~~-~~~~l~~l~~~GvnRiSlGvQsf~~~~l~~lgR~h~~~~~~~~~~~~~~~gf~~in- 162 (376)
T PRK05628 86 RDTFGLAPDAEVTTEAN-PEST-SPEFFAALRAAGYTRVSLGMQSAAPHVLAVLDRTHTPGRAVAAAREARAAGFEHVN- 162 (376)
T ss_pred HHHCCCCCCCEEEEEEC-CCCC-CHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEE-
T ss_conf 97589998856999834-2658-99999999974987599951558999999749999989999999999875997255-
Q ss_pred CCCEEEEE-EECHHHHHHHHHHHHHCCCCEEECCHHC-CCCCC-CCCCCC--CCCH------HHHHHHHHHHHHCCCCEE
Q ss_conf 14048876-4206889999999996699399750222-78610-078000--2384------699999999997496243
Q gi|254780676|r 232 KSGIMLGL-GETRNEILQLMDDLRTADVDFLTMGQYL-QPTRK-HHKVES--FVTP------QDFKSYETIAYSKGFLMV 300 (329)
Q Consensus 232 KSGlMvGL-GEt~eEi~e~l~DLr~~gvdilTiGQYL-~Ps~~-h~pV~r--yv~P------~eF~~~~~~a~~~Gf~~V 300 (329)
T Consensus 163 -~DLIyGlP~Qt~~~~~~~l~~~~~l~p~his~Y~l~~e~~t~~~~~~~~~~l~~p~e~~~~~~~~~~~~~L~~~Gy~~y 241 (376)
T PRK05628 163 -LDLIYGTPGETDDDLRRSLDAALEAGVDHVSAYALIVEDGTALARRVRRGELPAPDDDVLADRYELADARLSAAGFDWY 241 (376)
T ss_pred -EEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCE
T ss_conf -5544279999999999999999732898156655565478677777751789999999999999999999984787617
Q ss_pred ECCCCCCCCHHH
Q ss_conf 404830010318
Q gi|254780676|r 301 SASPLTRSSYHA 312 (329)
Q Consensus 301 ~SgPlVRSSY~A 312 (329)
T Consensus 242 eisnfak~g~~~ 253 (376)
T PRK05628 242 EVSNWARPGGEC 253 (376)
T ss_pred EEHHHCCCCHHH
T ss_conf 620321895366