HHsearch alignment for GI: 254780676 and conserved domain: PRK05799
>PRK05799 coproporphyrinogen III oxidase; Provisional.
Probab=97.89 E-value=0.0014 Score=46.88 Aligned_cols=212 Identities=15% Similarity=0.174 Sum_probs=136.4
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH--CCCEEEEECCCCCCCCCCH------HHHHHHHHHHHHHHC
Q ss_conf 86652235352234467899888823579999999970--7751898505445345325------899999999998533
Q gi|254780676|r 91 ILGAICTRACTFCNVATGKPQPLDPQEPENISWAVRSM--KLSHVVITSVDRDDLDDGG------AQHFAEVISAIRESA 162 (329)
Q Consensus 91 ilG~~CTR~C~FC~V~~G~P~~~D~~EP~rvA~av~~l--~Lk~vViTSV~RDDL~DgG------A~hfa~~I~~Ir~~~ 162 (329)
T Consensus 8 iHiPFC~~~C~yC~f~~~~~~~-~-~~~~Y~~~L~~Ei~~~~~~~~i~tiy----~GGGTPs~l~~~~l~~l~~~i~~~~ 81 (374)
T PRK05799 8 IHIPFCKQKCLYCDFPSYSGKE-D-LMMEYIKALSKEIVNKTKNKKIKSIF----IGGGTPSYLSLEALEILLKTIKKLN 81 (374)
T ss_pred EEECCCCCCCCCCCCCCCCCCC-H-HHHHHHHHHHHHHHHHCCCCCEEEEE----ECCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 9948999858999794748870-0-69999999999999765798154999----7996502299999999999998568
Q ss_pred ----CCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHCCCE-EEECCCEE
Q ss_conf ----5868998154623446899987410702332013830-00275638970358999999999970891-67014048
Q gi|254780676|r 163 ----PSTTIEVLTPDFLRKPHALEKVVSAKPDVFNHNLETV-ASNYLMVRPGARYFHSLRLLQRVKELDPL-IFTKSGIM 236 (329)
Q Consensus 163 ----P~~~IEvLiPDf~G~~~al~~v~~A~pdV~nHNiETV-~rLy~~VRp~a~Y~rSL~vL~~aK~~~~~-i~TKSGlM 236 (329)
T Consensus 82 ~~~~~E~TiE~nP~~~--~~~~l~~l~~~GvNRiSiGVQSf~~~~l~~lgR~h~~~~~~~ai~~~~~~gf~nin--iDLI 157 (374)
T PRK05799 82 KKENLEFTVEGNPGTF--TEEKLKILKSMGVNRISIGLQAWQNSLLKTLGRIHTFEEFLENYKLARKLGFNNIN--VDLM 157 (374)
T ss_pred CCCCCEEEEEECCCCC--CHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEE--EEEE
T ss_conf 8878458998566778--99999999971997588853358899999847999899999999999975997466--8854
Q ss_pred EEE-EECHHHHHHHHHHHHHCCCCEEECCHHC-CC-CCCC--CCCCCCCCHH------HHHHHHHHHHHCCCCEEECCCC
Q ss_conf 876-4206889999999996699399750222-78-6100--7800023846------9999999999749624340483
Q gi|254780676|r 237 LGL-GETRNEILQLMDDLRTADVDFLTMGQYL-QP-TRKH--HKVESFVTPQ------DFKSYETIAYSKGFLMVSASPL 305 (329)
Q Consensus 237 vGL-GEt~eEi~e~l~DLr~~gvdilTiGQYL-~P-s~~h--~pV~ryv~P~------eF~~~~~~a~~~Gf~~V~SgPl 305 (329)
T Consensus 158 yGlPgQt~~~~~~~l~~~~~l~p~hiS~Y~L~i~~~t~~~~~~~~~~~~~p~~~~~~~my~~~~~~L~~~Gy~~yeis~f 237 (374)
T PRK05799 158 FGLPNQTLEDWKETLEKVVELSPEHISCYSLIIEEGTPFYNLYENGKLKLPKEEEERKMYHYTIEFLKEKGYHQYEISNF 237 (374)
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCC
T ss_conf 48988878999999999984172501365420578867998875188899999999999999999998479976764655
Q ss_pred CCCCHHH
Q ss_conf 0010318
Q gi|254780676|r 306 TRSSYHA 312 (329)
Q Consensus 306 VRSSY~A 312 (329)
T Consensus 238 ak~~~~~ 244 (374)
T PRK05799 238 AKKGKEC 244 (374)
T ss_pred CCCCHHH
T ss_conf 7887565